RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRSS34 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000056399

Ensembl transcript IDs: ENSMUST00000037453.4

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CCCTCCTTCCCAGAGTTAAGGGACACCATAGACTCCAGGCCAGGAGCACAAGGTCCCCAGAGTCAGCCTTaGAAGAGTCCCTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSFPELRDTIDSRPGAQGPQSQP*KSPCPP
Trigger: AGGAGGGCAGGGACTCTTGCAAGGCTGACTCTGGGG...ACCTTGTGCTCCTGGCCTGGAGTCTATGGTGTCCCTTAACTCTGGGAAGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR TCA 90 bp CCCTCCTTCCCAGAGTTAAGGGACACCATAGACTCCAGGCCAGGAGCACAAGGTTTCGGCCTCACACAGTaGGCAGCAGTTAGCACCCAC +
Preference number: 4 (lower is better)
Translates to: PSFPELRDTIDSRPGAQGFGLTQ*AAVSTH
Trigger: GTGGGTGCTAACTGCTGCTCACTGTGTGAGGCCGAA...ACCTTGTGCTCCTGGCCTGGAGTCTATGGTGTCCCTTAACTCTGGGAAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR CCA 90 bp CCCTCCTTCCCAGAGTTAAGGGACACCATAGACTCCAGGCCAGGAGCACAAGGTCCACCTGCATACCAATaGGCCCCCAGAGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PSFPELRDTIDSRPGAQGPPAYQ*APRVSL
Trigger: AAGGCTGACTCTGGGGGCCCATTGGTATGCAGGTGG...ACCTTGTGCTCCTGGCCTGGAGTCTATGGTGTCCCTTAACTCTGGGAAGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR CCA 90 bp CCCTCCTTCCCAGAGTTAAGGGACACCATAGACTCCAGGCCAGGAGCACAAGGTCTGACCACACCCACCTaGACCCAGGAACAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PSFPELRDTIDSRPGAQGLTTPT*TQEQFH
Trigger: GTGGAACTGTTCCTGGGTCCAGGTGGGTGTGGTCAG...ACCTTGTGCTCCTGGCCTGGAGTCTATGGTGTCCCTTAACTCTGGGAAGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR TCA 90 bp CCCTCCTTCCCAGAGTTAAGGGACACCATAGACTCCAGGCCAGGAGCACAAGGTTGGGGACATAGCATTTaGTCCAGGACACGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: PSFPELRDTIDSRPGAQGWGHSI*SRTRSS
Trigger: TGAGCTACGTGTCCTGGATCAAATGCTATGTCCCCA...ACCTTGTGCTCCTGGCCTGGAGTCTATGGTGTCCCTTAACTCTGGGAAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR CCA 90 bp TTAATGGGAAACATGGTAAGGAGGGAATATGGGCTTCCAGCTACTTTTGAGATGGCCACGGGAACCGGCTaGCTGAGACAGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LMGNMVRREYGLPATFEMATGTG*LRQGSP
Trigger: GGGGCTGCCCTGTCTCAGCCAGCCGGTTCCCGTGGC...CATCTCAAAAGTAGCTGGAAGCCCATATTCCCTCCTTACCATGTTTCCCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR CCA 90 bp CCCTCCTTCCCAGAGTTAAGGGACACCATAGACTCCAGGCCAGGAGCACAAGGTATGGATCAATATGAGTaGCTGGGGTCTCCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PSFPELRDTIDSRPGAQGMDQYE*LGSPLL
Trigger: CAACAGAGGAGACCCCAGCCACTCATATTGATCCAT...ACCTTGTGCTCCTGGCCTGGAGTCTATGGTGTCCCTTAACTCTGGGAAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR GCA 90 bp CCCTCCTTCCCAGAGTTAAGGGACACCATAGACTCCAGGCCAGGAGCACAAGGTTTGGTCTGGTACTTCTaGTCACAGTCATTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSFPELRDTIDSRPGAQGLVWYF*SQSLFS
Trigger: GGAAAACAATGACTGTGAGCAGAAGTACCAGACCAA...ACCTTGTGCTCCTGGCCTGGAGTCTATGGTGTCCCTTAACTCTGGGAAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR GCA 90 bp TTAATGGGAAACATGGTAAGGAGGGAATATGGGCTTCCAGCTACTTTTGAGATGCCTTGCAAGAGTCCCTaGCCTCCTTCCCAGCACAAA +
Preference number: 4 (lower is better)
Translates to: LMGNMVRREYGLPATFEMPCKSP*PPSQHK
Trigger: TTTGTGCTGGGAAGGAGGGCAGGGACTCTTGCAAGG...CATCTCAAAAGTAGCTGGAAGCCCATATTCCCTCCTTACCATGTTTCCCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR GCA 90 bp TTAATGGGAAACATGGTAAGGAGGGAATATGGGCTTCCAGCTACTTTTGAGATGAGGAACAGTTCCACCTaGATACCAATGGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LMGNMVRREYGLPATFEMRNSST*IPMGPQ
Trigger: CTGGGGGCCCATTGGTATGCAGGTGGAACTGTTCCT...CATCTCAAAAGTAGCTGGAAGCCCATATTCCCTCCTTACCATGTTTCCCATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR TCA 90 bp TTAATGGGAAACATGGTAAGGAGGGAATATGGGCTTCCAGCTACTTTTGAGATGGTCTCCTCTGTTGTATaGATCCCATCTGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LMGNMVRREYGLPATFEMVSSVV*IPSGPF
Trigger: GAAGGGGCCAGATGGGATTCATACAACAGAGGAGAC...CATCTCAAAAGTAGCTGGAAGCCCATATTCCCTCCTTACCATGTTTCCCATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR CCA 90 bp TTAATGGGAAACATGGTAAGGAGGGAATATGGGCTTCCAGCTACTTTTGAGATGTCACTAAACTTGGGGTaGCGGATGATCTTGACCACT +
Preference number: 4 (lower is better)
Translates to: LMGNMVRREYGLPATFEMSLNLG*RMILTT
Trigger: AGTGGTCAAGATCATCCGCCACCCCAAGTTTAGTGA...CATCTCAAAAGTAGCTGGAAGCCCATATTCCCTCCTTACCATGTTTCCCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR CCA 90 bp TTAATGGGAAACATGGTAAGGAGGGAATATGGGCTTCCAGCTACTTTTGAGATGAGAAGGAGGAGTGAATaGATCAATATGAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LMGNMVRREYGLPATFEMRRRSE*INMSGW
Trigger: CCAGCCACTCATATTGATCCATTCACTCCTCCTTCT...CATCTCAAAAGTAGCTGGAAGCCCATATTCCCTCCTTACCATGTTTCCCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS TCA 90 bp ACTCGTGTTCCCATCTGCTGTGCTCCATGTCGTAGAGCCTCAAGCTaGCCTGCCACGGGAACCGGCTGGCTGAGACAGGGCAGCCCCCGA +
Preference number: 5 (lower is better)
Translates to: TRVPICCAPCRRASS*PATGTGWLRQGSPR
Trigger: TCGGGGGCTGCCCTGTCTCAGCCAGCCGGTTCCCGTGGCAGGTCAGCTTGAGGCTCTACGACATGGAGCACAGCAGATGGGAACACGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR CAA 90 bp CCCTCCTTCCCAGAGTTAAGGGACACCATAGACTCCAGGCCAGGAGCACAAGGTAGCTTCTCACTAAACTaGGGGTGGCGGATGATCTTG +
Preference number: 5 (lower is better)
Translates to: PSFPELRDTIDSRPGAQGSFSLN*GWRMIL
Trigger: CAAGATCATCCGCCACCCCAAGTTTAGTGAGAAGCT...ACCTTGTGCTCCTGGCCTGGAGTCTATGGTGTCCCTTAACTCTGGGAAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS TCA 90 bp CATCTGGCCCCTTCAAAGGTTCTAGGAACGTGGGGACATAGCATTTaGTCCAGGACACGTAGCTCATCACCCGGGTGTATACACCAGGGA +
Preference number: 5 (lower is better)
Translates to: HLAPSKVLGTWGHSI*SRTRSSSPGCIHQG
Trigger: TCCCTGGTGTATACACCCGGGTGATGAGCTACGTGTCCTGGATCAAATGCTATGTCCCCACGTTCCTAGAACCTTTGAAGGGGCCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS GCA 90 bp ATGATCCTGGTAGTGCTGTCCGAGGAAGAATTGGTCTGGTACTTCTaGTCACAGTCATTGTTTTCCACGATGGGGACCGCCACTTCCCTC +
Preference number: 5 (lower is better)
Translates to: MILVVLSEEELVWYF*SQSLFSTMGTATSL
Trigger: GAGGGAAGTGGCGGTCCCCATCGTGGAAAACAATGACTGTGAGCAGAAGTACCAGACCAATTCTTCCTCGGACAGCACTACCAGGATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR CAA 90 bp TTAATGGGAAACATGGTAAGGAGGGAATATGGGCTTCCAGCTACTTTTGAGATGCTGGGGTCTCCTCTGTaGTATGAATCCCATCTGGCC +
Preference number: 5 (lower is better)
Translates to: LMGNMVRREYGLPATFEMLGSPL*YESHLA
Trigger: GGCCAGATGGGATTCATACAACAGAGGAGACCCCAG...CATCTCAAAAGTAGCTGGAAGCCCATATTCCCTCCTTACCATGTTTCCCATTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS-3UTR CAA 90 bp TTAATGGGAAACATGGTAAGGAGGGAATATGGGCTTCCAGCTACTTTTGAGATGTTCTGCTCACAGTCATaGTTTTCCACGATGGGGACC +
Preference number: 5 (lower is better)
Translates to: LMGNMVRREYGLPATFEMFCSQS*FSTMGT
Trigger: GGTCCCCATCGTGGAAAACAATGACTGTGAGCAGAA...CATCTCAAAAGTAGCTGGAAGCCCATATTCCCTCCTTACCATGTTTCCCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS TCA 72 bp GAGCCTCAAGCTGACCTGCCACGGGAACCGGCTGGCTaGGACAGGGCAGCCCCCGACGATGCCTACCAACCC +
Preference number: 6 (lower is better)
Translates to: EPQADLPREPAG*DRAAPDDAYQP
Trigger: GGGTTGGTAGGCATCGTCGGGGGCTGCCCTGTCTCAGCCAGCCGGTTCCCGTGGCAGGTCAGCTTGAGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS GCA 72 bp GGAACCGGCTGGCTGAGACAGGGCAGCCCCCGACGATaGCTACCAACCCCTGTCCTGAGCCAAGGTCAAGAG +
Preference number: 6 (lower is better)
Translates to: GTGWLRQGSPRR*LPTPVLSQGQE
Trigger: CTCTTGACCTTGGCTCAGGACAGGGGTTGGTAGGCATCGTCGGGGGCTGCCCTGTCTCAGCCAGCCGGTTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS TCA 72 bp CCCATCTGCTGTGCTCCATGTCGTAGAGCCTCAAGCTaGCCTGCCACGGGAACCGGCTGGCTGAGACAGGGC +
Preference number: 6 (lower is better)
Translates to: PICCAPCRRASS*PATGTGWLRQG
Trigger: GCCCTGTCTCAGCCAGCCGGTTCCCGTGGCAGGTCAGCTTGAGGCTCTACGACATGGAGCACAGCAGATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS CCA 72 bp GACCGCCACTTCCCTCAGGTGGTAGGGTGGGGGCAGTaGCATGTAGTTCTCGATGACACCCCAGCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: DRHFPQVVGWGQ*HVVLDDTPASH
Trigger: GTGGCTGGCTGGGGTGTCATCGAGAACTACATGCCACTGCCCCCACCCTACCACCTGAGGGAAGTGGCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS TCA 72 bp AGGGCAGCCCCCGACGATGCCTACCAACCCCTGTCCTaGGCCAAGGTCAAGAGTCAGAGGCATCGTGTTCCC +
Preference number: 6 (lower is better)
Translates to: RAAPDDAYQPLS*AKVKSQRHRVP
Trigger: GGGAACACGATGCCTCTGACTCTTGACCTTGGCTCAGGACAGGGGTTGGTAGGCATCGTCGGGGGCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS CCA 72 bp CACCTGGACCCAGGAACAGTTCCACCTGCATACCAATaGGCCCCCAGAGTCAGCCTTGCAAGAGTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: HLDPGTVPPAYQ*APRVSLARVPA
Trigger: GGCAGGGACTCTTGCAAGGCTGACTCTGGGGGCCCATTGGTATGCAGGTGGAACTGTTCCTGGGTCCAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS CCA 72 bp CCCCCACGGGCAGACAGCTTCTCACTAAACTTGGGGTaGCGGATGATCTTGACCACTTTCATCAGCTGGTCG +
Preference number: 6 (lower is better)
Translates to: PPRADSFSLNLG*RMILTTFISWS
Trigger: CGACCAGCTGATGAAAGTGGTCAAGATCATCCGCCACCCCAAGTTTAGTGAGAAGCTGTCTGCCCGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS CAA 72 bp TCCGCACCCCCACGGGCAGACAGCTTCTCACTAAACTaGGGGTGGCGGATGATCTTGACCACTTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: SAPPRADSFSLN*GWRMILTTFIS
Trigger: GCTGATGAAAGTGGTCAAGATCATCCGCCACCCCAAGTTTAGTGAGAAGCTGTCTGCCCGTGGGGGTGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS GCA 72 bp GTAGTGCTGTCCGAGGAAGAATTGGTCTGGTACTTCTaGTCACAGTCATTGTTTTCCACGATGGGGACCGCC +
Preference number: 6 (lower is better)
Translates to: VVLSEEELVWYF*SQSLFSTMGTA
Trigger: GGCGGTCCCCATCGTGGAAAACAATGACTGTGAGCAGAAGTACCAGACCAATTCTTCCTCGGACAGCACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS CAA 72 bp GAGGAAGAATTGGTCTGGTACTTCTGCTCACAGTCATaGTTTTCCACGATGGGGACCGCCACTTCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: EEELVWYFCSQS*FSTMGTATSLR
Trigger: CCTGAGGGAAGTGGCGGTCCCCATCGTGGAAAACAATGACTGTGAGCAGAAGTACCAGACCAATTCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS TCA 72 bp CCTTCAAAGGTTCTAGGAACGTGGGGACATAGCATTTaGTCCAGGACACGTAGCTCATCACCCGGGTGTATA +
Preference number: 6 (lower is better)
Translates to: PSKVLGTWGHSI*SRTRSSSPGCI
Trigger: TATACACCCGGGTGATGAGCTACGTGTCCTGGATCAAATGCTATGTCCCCACGTTCCTAGAACCTTTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4
CDS CCA 72 bp ATGATCCTGGTAGTGCTGTCCGAGGAAGAATTGGTCTaGTACTTCTGCTCACAGTCATTGTTTTCCACGATG +
Preference number: 6 (lower is better)
Translates to: MILVVLSEEELV*YFCSQSLFSTM
Trigger: CATCGTGGAAAACAATGACTGTGAGCAGAAGTACCAGACCAATTCTTCCTCGGACAGCACTACCAGGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037453.4