Pregenerated sensors for PRSS33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049620Ensembl transcript IDs: ENSMUST00000059906.8, ENSMUST00000115444.3
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCCAGTGACCCAGCATGGAGACCCTGGTGGTGGATGGGACCCTaGTGCAGGCAGGCAGACAGGCTGGATGCGGGTGCTCAGGGACAC | + |
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Preference number: 1 (lower is better) Translates to: PASDPAWRPWWWMGP*CRQADRLDAGAQGH Trigger: GTGTCCCTGAGCACCCGCATCCAGCCTGTCTGCCTGCCTGCACCAGGGTCCCATCCACCACCAGGGTCTCCATGCTGGGTCACTGGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR GCA 90 bp | AGGCGGTCACAGGCTCGGGAGTCCAGCAGCGGCACCCTCACTCCTTaGAAGGGTCTCCCCTTTGGGAGTGGTACTCCTGGGCTGAGGCTA | + |
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Preference number: 1 (lower is better) Translates to: RRSQARESSSGTLTP*KGLPFGSGTPGLRL Trigger: TAGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGTGAGGGTGCCGCTGCTGGACTCCCGAGCCTGTGACCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 90 bp | GGAGTCCAGCAGCGGCACCCTCACTCCTTGCAAGGGTCTCCCCTTTaGGAGTGGTACTCCTGGGCTGAGGCTACCCCAGCCAGTGACCCA | + |
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Preference number: 1 (lower is better) Translates to: GVQQRHPHSLQGSPL*EWYSWAEATPASDP Trigger: TGGGTCACTGGCTGGGGTAGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGTGAGGGTGCCGCTGCTGGACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 90 bp | CACCCTCACTCCTTGCAAGGGTCTCCCCTTTGGGAGTGGTACTCCTaGGCTGAGGCTACCCCAGCCAGTGACCCAGCATGGAGACCCTGG | + |
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Preference number: 1 (lower is better) Translates to: HPHSLQGSPLWEWYS*AEATPASDPAWRPW Trigger: CCAGGGTCTCCATGCTGGGTCACTGGCTGGGGTAGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGTGAGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR GCA 90 bp | TGTGGCCTCTGCGGTAGCCAGCACACAAGTTCCCTGGTAGCACTATaGGTTCACCCTGGGGCACGTTGGCACCCACGTGGTAGAGGCGGT | + |
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Preference number: 1 (lower is better) Translates to: CGLCGSQHTSSLVAL*VHPGARWHPRGRGG Trigger: ACCGCCTCTACCACGTGGGTGCCAACGTGCCCCAGGGTGAACGCATAGTGCTACCAGGGAACTTGTGTGCTGGCTACCGCAGAGGCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 90 bp | CACACAAGTTCCCTGGTAGCACTATGCGTTCACCCTGGGGCACGTTaGCACCCACGTGGTAGAGGCGGTCACAGGCTCGGGAGTCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: HTSSLVALCVHPGAR*HPRGRGGHRLGSPA Trigger: TGCTGGACTCCCGAGCCTGTGACCGCCTCTACCACGTGGGTGCCAACGTGCCCCAGGGTGAACGCATAGTGCTACCAGGGAACTTGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR TCA 90 bp | GCAGCAGCACCCGCAGCACAGGAACCAAGAGCTCGTGGGATGACCTaGCGTCCAGACTCAGTGCTCCCAGGAGCACACTGTACTCTGACG | + |
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Preference number: 1 (lower is better) Translates to: AAAPAAQEPRARGMT*RPDSVLPGAHCTLT Trigger: CGTCAGAGTACAGTGTGCTCCTGGGAGCACTGAGTCTGGACGTCAGGTCATCCCACGAGCTCTTGGTTCCTGTGCTGCGGGTGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR TCA 90 bp | AGGAGGCAGCAGCACCCGCAGCACAGGAACCAAGAGCTCGTGGGATaGCCTGACGTCCAGACTCAGTGCTCCCAGGAGCACACTGTACTC | + |
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Preference number: 1 (lower is better) Translates to: RRQQHPQHRNQELVG*PDVQTQCSQEHTVL Trigger: GAGTACAGTGTGCTCCTGGGAGCACTGAGTCTGGACGTCAGGTCATCCCACGAGCTCTTGGTTCCTGTGCTGCGGGTGCTGCTGCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR GCA 90 bp | TCCAGGGTGTTGGAGGTTCCTGGTGGCCACAGACTTCTCTCCCCCTaGTGGCTGTCAGTGCCTTGTGGTTCCTCAGTGTCTGGCCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: SRVLEVPGGHRLLSP*WLSVPCGSSVSGPS Trigger: TGAGGGGCCAGACACTGAGGAACCACAAGGCACTGACAGCCAGCAGGGGGAGAGAAGTCTGTGGCCACCAGGAACCTCCAACACCCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR CCA 90 bp | AGGGTGTTGGAGGTTCCTGGTGGCCACAGACTTCTCTCCCCCTGCTaGCTGTCAGTGCCTTGTGGTTCCTCAGTGTCTGGCCCCTCAACC | + |
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Preference number: 1 (lower is better) Translates to: RVLEVPGGHRLLSPC*LSVPCGSSVSGPST Trigger: GGTTGAGGGGCCAGACACTGAGGAACCACAAGGCACTGACAGCCAGCAGGGGGAGAGAAGTCTGTGGCCACCAGGAACCTCCAACACCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR GCA 90 bp | AGGTTCCTGGTGGCCACAGACTTCTCTCCCCCTGCTGGCTGTCAGTaGCTTGTGGTTCCTCAGTGTCTGGCCCCTCAACCTTCAAAGTCA | + |
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Preference number: 1 (lower is better) Translates to: RFLVATDFSPPAGCQ*LVVPQCLAPQPSKS Trigger: TGACTTTGAAGGTTGAGGGGCCAGACACTGAGGAACCACAAGGCACTGACAGCCAGCAGGGGGAGAGAAGTCTGTGGCCACCAGGAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR TCA 90 bp | AAGGAGAGAGCAGAGTGTAAGTGCAGGGGACTCACAGAAGATCCCTaGGTGATAGAAGATGGGCCTGAAGGAGGAGAGGAGGGAAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: KERAECKCRGLTEDP*VIEDGPEGGEEGRG Trigger: CCCCCTTCCCTCCTCTCCTCCTTCAGGCCCATCTTCTATCACTCAGGGATCTTCTGTGAGTCCCCTGCACTTACACTCTGCTCTCTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR TCA 90 bp | AATCTGTCTGACTTCCTCCAGGATGCAAAGGGCATACAGGCCAGATaGGCCAAAAGGAGAGAGCAGAGTGTAAGTGCAGGGGACTCACAG | + |
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Preference number: 1 (lower is better) Translates to: NLSDFLQDAKGIQAR*AKRREQSVSAGDSQ Trigger: CTGTGAGTCCCCTGCACTTACACTCTGCTCTCTCCTTTTGGCTCATCTGGCCTGTATGCCCTTTGCATCCTGGAGGAAGTCAGACAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR CCA 90 bp | ACTCTTAGCATCTCAGCTTCATGTGAGAAAGAGGGGAATGTGGGATaGACCAGGAAGCTCCAGATTCACATTTTCAGACCCACCAGCATC | + |
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Preference number: 1 (lower is better) Translates to: TLSISASCEKEGNVG*TRKLQIHIFRPTSI Trigger: GATGCTGGTGGGTCTGAAAATGTGAATCTGGAGCTTCCTGGTCCATCCCACATTCCCCTCTTTCTCACATGAAGCTGAGATGCTAAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR TCA 90 bp | GAGATTCTCCTTGGTGTAGAGTTCCTCTTATACTTTAAATCTGTCTaGCTTCCTCCAGGATGCAAAGGGCATACAGGCCAGATGAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: EILLGVEFLLYFKSV*LPPGCKGHTGQMSQ Trigger: TTGGCTCATCTGGCCTGTATGCCCTTTGCATCCTGGAGGAAGTCAGACAGATTTAAAGTATAAGAGGAACTCTACACCAAGGAGAATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR CAA 90 bp | GAGGCGGTCACAGGCTCGGGAGTCCAGCAGCGGCACCCTCACTCCTaGCAAGGGTCTCCCCTTTGGGAGTGGTACTCCTGGGCTGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: EAVTGSGVQQRHPHS*QGSPLWEWYSWAEA Trigger: AGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGTGAGGGTGCCGCTGCTGGACTCCCGAGCCTGTGACCGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGGTCTCCCCTTTGGGAGTGGTACTCCTGGGCTGAGGCTACCCCAGCCAGTGGGCAGACAGGCTGGATaGGGGTGCTCAGGGACACTG | + |
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Preference number: 2 (lower is better) Translates to: KGLPFGSGTPGLRLPQPVGRQAG*GCSGTL Trigger: CAGTGTCCCTGAGCACCCGCATCCAGCCTGTCTGCC...CACTGGCTGGGGTAGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR-3UTR GCA 90 bp | ACTCCTTGCAAGGGTCTCCCCTTTGGGAGTGGTACTCCTGGGCTGAGGCTACCCTGGATGGGACCCTGGTaGAGGCAGGCAGACAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TPCKGLPFGSGTPGLRLPWMGPW*RQADRL Trigger: CAGCCTGTCTGCCTGCCTGCACCAGGGTCCCATCCA...GGGTAGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCTGCTGGCTGTCAGTGCCTTGTGGTTCCTCAGTGTCTGGCCCCTCAACCGAGGGGAATGTGGGATaGACCAGGAAGCTCCAGATT | + |
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Preference number: 2 (lower is better) Translates to: SPCWLSVPCGSSVSGPSTEGNVG*TRKLQI Trigger: AATCTGGAGCTTCCTGGTCCATCCCACATTCCCCTC...GGTTGAGGGGCCAGACACTGAGGAACCACAAGGCACTGACAGCCAGCAGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTCTCCCCTTTGGGAGTGGTACTCCTGGGCTGAGGCTACCCCAGCCAGTGGAGGGGAATGTGGGATaGACCAGGAAGCTCCAGATT | + |
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Preference number: 2 (lower is better) Translates to: KGLPFGSGTPGLRLPQPVEGNVG*TRKLQI Trigger: AATCTGGAGCTTCCTGGTCCATCCCACATTCCCCTC...CACTGGCTGGGGTAGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR-3UTR CCA 90 bp | CAGACTCCAGGGTGTTGGAGGTTCCTGGTGGCCACAGACTTCTCTCCCCCTGCTAGAAAGAGGGGAATGTaGGATGGACCAGGAAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: QTPGCWRFLVATDFSPPARKRGM*DGPGSS Trigger: GGAGCTTCCTGGTCCATCCCACATTCCCCTCTTTCT...AGCAGGGGGAGAGAAGTCTGTGGCCACCAGGAACCTCCAACACCCTGGAGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR-3UTR CCA 90 bp | GAATGTGGGATGGACCAGGAAGCTCCAGATTCACATTTTCAGACCCACCAGCATGACCCTGGTGGTGGATaGGACCCTGGTGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: ECGMDQEAPDSHFQTHQHDPGGG*DPGAGR Trigger: CCTGCCTGCACCAGGGTCCCATCCACCACCAGGGTC...ATGCTGGTGGGTCTGAAAATGTGAATCTGGAGCTTCCTGGTCCATCCCACATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR-3UTR GCA 90 bp | CAGACTCCAGGGTGTTGGAGGTTCCTGGTGGCCACAGACTTCTCTCCCCCTGCTAGAGCAGAGTGTAAGTaGAGGGGACTCACAGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: QTPGCWRFLVATDFSPPARAECK*RGLTED Trigger: ATCTTCTGTGAGTCCCCTGCACTTACACTCTGCTCT...AGCAGGGGGAGAGAAGTCTGTGGCCACCAGGAACCTCCAACACCCTGGAGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGACCCACCAGCATCAGAGGCTCAGGCGAGCCTGGATCCAGGGACTATACAGAAAGAGGGGAATGTaGGATGGACCAGGAAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: FQTHQHQRLRRAWIQGLYRKRGM*DGPGSS Trigger: GGAGCTTCCTGGTCCATCCCACATTCCCCTCTTTCT...GTATAGTCCCTGGATCCAGGCTCGCCTGAGCCTCTGATGCTGGTGGGTCTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR GCA 72 bp | CCAGCATGGAGACCCTGGTGGTGGATGGGACCCTGGTaGAGGCAGGCAGACAGGCTGGATGCGGGTGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: PAWRPWWWMGPW*RQADRLDAGAQ Trigger: CTGAGCACCCGCATCCAGCCTGTCTGCCTGCCTGCACCAGGGTCCCATCCACCACCAGGGTCTCCATGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 72 bp | GACCCAGCATGGAGACCCTGGTGGTGGATGGGACCCTaGTGCAGGCAGGCAGACAGGCTGGATGCGGGTGCT | + |
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Preference number: 3 (lower is better) Translates to: DPAWRPWWWMGP*CRQADRLDAGA Trigger: AGCACCCGCATCCAGCCTGTCTGCCTGCCTGCACCAGGGTCCCATCCACCACCAGGGTCTCCATGCTGGGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR GCA 72 bp | CAGGCTCGGGAGTCCAGCAGCGGCACCCTCACTCCTTaGAAGGGTCTCCCCTTTGGGAGTGGTACTCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QARESSSGTLTP*KGLPFGSGTPG Trigger: CCCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGTGAGGGTGCCGCTGCTGGACTCCCGAGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 72 bp | CAGCCAGTGACCCAGCATGGAGACCCTGGTGGTGGATaGGACCCTGGTGCAGGCAGGCAGACAGGCTGGATG | + |
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Preference number: 3 (lower is better) Translates to: QPVTQHGDPGGG*DPGAGRQTGWM Trigger: CATCCAGCCTGTCTGCCTGCCTGCACCAGGGTCCCATCCACCACCAGGGTCTCCATGCTGGGTCACTGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 72 bp | CAGCGGCACCCTCACTCCTTGCAAGGGTCTCCCCTTTaGGAGTGGTACTCCTGGGCTGAGGCTACCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: QRHPHSLQGSPL*EWYSWAEATPA Trigger: GGCTGGGGTAGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGTGAGGGTGCCGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 72 bp | TCCCTGGTAGCACTATGCGTTCACCCTGGGGCACGTTaGCACCCACGTGGTAGAGGCGGTCACAGGCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: SLVALCVHPGAR*HPRGRGGHRLG Trigger: CCCGAGCCTGTGACCGCCTCTACCACGTGGGTGCCAACGTGCCCCAGGGTGAACGCATAGTGCTACCAGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 72 bp | GGCAGCAGCACCCGCAGCACAGGAACCAAGAGCTCGTaGGATGACCTGACGTCCAGACTCAGTGCTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GSSTRSTGTKSS*DDLTSRLSAPR Trigger: CCTGGGAGCACTGAGTCTGGACGTCAGGTCATCCCACGAGCTCTTGGTTCCTGTGCTGCGGGTGCTGCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 72 bp | TCCTTGCAAGGGTCTCCCCTTTGGGAGTGGTACTCCTaGGCTGAGGCTACCCCAGCCAGTGACCCAGCATGG | + |
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Preference number: 3 (lower is better) Translates to: SLQGSPLWEWYS*AEATPASDPAW Trigger: CCATGCTGGGTCACTGGCTGGGGTAGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 72 bp | CACCCTCACTCCTTGCAAGGGTCTCCCCTTTGGGAGTaGTACTCCTGGGCTGAGGCTACCCCAGCCAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: HPHSLQGSPLWE*YSWAEATPASD Trigger: GTCACTGGCTGGGGTAGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGTGAGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR TCA 72 bp | CCCGCAGCACAGGAACCAAGAGCTCGTGGGATGACCTaGCGTCCAGACTCAGTGCTCCCAGGAGCACACTGT | + |
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Preference number: 3 (lower is better) Translates to: PAAQEPRARGMT*RPDSVLPGAHC Trigger: ACAGTGTGCTCCTGGGAGCACTGAGTCTGGACGTCAGGTCATCCCACGAGCTCTTGGTTCCTGTGCTGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR GCA 72 bp | TGCGGTAGCCAGCACACAAGTTCCCTGGTAGCACTATaGGTTCACCCTGGGGCACGTTGGCACCCACGTGGT | + |
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Preference number: 3 (lower is better) Translates to: CGSQHTSSLVAL*VHPGARWHPRG Trigger: ACCACGTGGGTGCCAACGTGCCCCAGGGTGAACGCATAGTGCTACCAGGGAACTTGTGTGCTGGCTACCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 72 bp | GGCGAGCCTGGATCCAGGGACTATACTTGGCCACATTaGTATAGACACCTGGACGGTTGGGCAGGGCACAGC | + |
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Preference number: 3 (lower is better) Translates to: GEPGSRDYTWPH*YRHLDGWAGHS Trigger: GCTGTGCCCTGCCCAACCGTCCAGGTGTCTATACCAATGTGGCCAAGTATAGTCCCTGGATCCAGGCTCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| 3UTR CCA 72 bp | AGAAGATGGGGGAATTGTATCCAGACTCCAGGGTGTTaGAGGTTCCTGGTGGCCACAGACTTCTCTCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: RRWGNCIQTPGC*RFLVATDFSPP Trigger: AGGGGGAGAGAAGTCTGTGGCCACCAGGAACCTCCAACACCCTGGAGTCTGGATACAATTCCCCCATCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR TCA 72 bp | GCAGAGTGTAAGTGCAGGGGACTCACAGAAGATCCCTaGGTGATAGAAGATGGGCCTGAAGGAGGAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: AECKCRGLTEDP*VIEDGPEGGEE Trigger: CTCCTCTCCTCCTTCAGGCCCATCTTCTATCACTCAGGGATCTTCTGTGAGTCCCCTGCACTTACACTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR TCA 72 bp | GACTTCCTCCAGGATGCAAAGGGCATACAGGCCAGATaGGCCAAAAGGAGAGAGCAGAGTGTAAGTGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: DFLQDAKGIQAR*AKRREQSVSAG Trigger: CCCTGCACTTACACTCTGCTCTCTCCTTTTGGCTCATCTGGCCTGTATGCCCTTTGCATCCTGGAGGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR CCA 72 bp | CTGCTGGCTGTCAGTGCCTTGTGGTTCCTCAGTGTCTaGCCCCTCAACCTTCAAAGTCAGCAAAGGAGATTC | + |
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Preference number: 3 (lower is better) Translates to: LLAVSALWFLSV*PLNLQSQQRRF Trigger: GAATCTCCTTTGCTGACTTTGAAGGTTGAGGGGCCAGACACTGAGGAACCACAAGGCACTGACAGCCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR TCA 72 bp | GATCAAAAGCTCAGGCAGCTCAGTTGCGTCCTCTGTTaGGGGCTTTACCAGCATGAAGCTAAGGGATTAGAA | + |
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Preference number: 3 (lower is better) Translates to: DQKLRQLSCVLC*GLYQHEAKGLE Trigger: TTCTAATCCCTTAGCTTCATGCTGGTAAAGCCCTCAACAGAGGACGCAACTGAGCTGCCTGAGCTTTTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR TCA 72 bp | CTTGGTGTAGAGTTCCTCTTATACTTTAAATCTGTCTaGCTTCCTCCAGGATGCAAAGGGCATACAGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LGVEFLLYFKSV*LPPGCKGHTGQ Trigger: CTGGCCTGTATGCCCTTTGCATCCTGGAGGAAGTCAGACAGATTTAAAGTATAAGAGGAACTCTACACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR CCA 72 bp | TTAGCATCTCAGCTTCATGTGAGAAAGAGGGGAATGTaGGATGGACCAGGAAGCTCCAGATTCACATTTTCA | + |
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Preference number: 3 (lower is better) Translates to: LASQLHVRKRGM*DGPGSSRFTFS Trigger: TGAAAATGTGAATCTGGAGCTTCCTGGTCCATCCCACATTCCCCTCTTTCTCACATGAAGCTGAGATGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS-3UTR TCA 90 bp | ACTCCTTGCAAGGGTCTCCCCTTTGGGAGTGGTACTCCTGGGCTGAGGCTACCCGGCCACTCTCCATCCTaGGCATCCCGGCCCCCAACG | + |
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Preference number: 4 (lower is better) Translates to: TPCKGLPFGSGTPGLRLPGHSPS*ASRPPT Trigger: CGTTGGGGGCCGGGATGCTCAGGATGGAGAGTGGCC...GGGTAGCCTCAGCCCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| CDS-3UTR CCA 90 bp | CAGACTCCAGGGTGTTGGAGGTTCCTGGTGGCCACAGACTTCTCTCCCCCTGCTCCCCAACGATCCGGCTaGACATGCGGGGCTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QTPGCWRFLVATDFSPPAPQRSG*TCGAAH Trigger: GTGGGCAGCCCCGCATGTCCAGCCGGATCGTTGGGG...AGCAGGGGGAGAGAAGTCTGTGGCCACCAGGAACCTCCAACACCCTGGAGTCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| 3UTR CAA 72 bp | ACAGGCTCGGGAGTCCAGCAGCGGCACCCTCACTCCTaGCAAGGGTCTCCCCTTTGGGAGTGGTACTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TGSGVQQRHPHS*QGSPLWEWYSW Trigger: CCAGGAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGTGAGGGTGCCGCTGCTGGACTCCCGAGCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| CDS-3UTR TCA 90 bp | AGGAGAGGAGGGAAGGGGGTAGGCAGATGGACTCTTAGCATCTCAGCTTCATGTGGCCACTCTCCATCCTaGGCATCCCGGCCCCCAACG | + |
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Preference number: 4 (lower is better) Translates to: RRGGKGVGRWTLSISASCGHSPS*ASRPPT Trigger: CGTTGGGGGCCGGGATGCTCAGGATGGAGAGTGGCC...ACATGAAGCTGAGATGCTAAGAGTCCATCTGCCTACCCCCTTCCCTCCTCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS-3UTR TCA 90 bp | CATACAGGCCAGATGAGCCAAAAGGAGAGAGCAGAGTGTAAGTGCAGGGGACTCGGCTACCCCAGCCAGTaGCCCAGCATGGAGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: HTGQMSQKERAECKCRGLGYPSQ*PSMETL Trigger: CAGGGTCTCCATGCTGGGTCACTGGCTGGGGTAGCC...GAGTCCCCTGCACTTACACTCTGCTCTCTCCTTTTGGCTCATCTGGCCTGTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR GCA 90 bp | CCAGCAGCGGCACCCTCACTCCTTGCAAGGGTCTCCCCTTTGGGAGTGGTACTCAGAGACCAAGGACAGTaGCAGAGAGTCTGTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PAAAPSLLARVSPLGVVLRDQGQ*QRVCAS Trigger: TGAGGCACAGACTCTCTGGCACTGTCCTTGGTCTCT...GAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGTGAGGGTGCCGCTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| CDS-3UTR CCA 90 bp | GAGGGGAATGTGGGATGGACCAGGAAGCTCCAGATTCACATTTTCAGACCCACCGGTGCTCAGGGACACTaGGTGACGCAGCTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: EGNVGWTRKLQIHIFRPTGAQGH*VTQLQQ Trigger: CTGCTGCAGCTGCGTCACCCAGTGTCCCTGAGCACC...GGTGGGTCTGAAAATGTGAATCTGGAGCTTCCTGGTCCATCCCACATTCCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR CCA 90 bp | TGGTTCCTCAGTGTCTGGCCCCTCAACCTTCAAAGTCAGCAAAGGAGATTCTCCCACCCTGGGGCACGTTaGCACCCACGTGGTAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: WFLSVWPLNLQSQQRRFSHPGAR*HPRGRG Trigger: GCCTCTACCACGTGGGTGCCAACGTGCCCCAGGGTG...GGAGAATCTCCTTTGCTGACTTTGAAGGTTGAGGGGCCAGACACTGAGGAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR GCA 90 bp | TCAGACCCACCAGCATCAGAGGCTCAGGCGAGCCTGGATCCAGGGACTATACTTCTCCACGGTGCTGAATaGTTGTTTGCCACGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: SDPPASEAQASLDPGTILLHGAE*LFATAT Trigger: AGTGGCCGTGGCAAACAAGCATTCAGCACCGTGGAG...AAGTATAGTCCCTGGATCCAGGCTCGCCTGAGCCTCTGATGCTGGTGGGTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| CDS-3UTR CCA 90 bp | AGATGGACTCTTAGCATCTCAGCTTCATGTGAGAAAGAGGGGAATGTGGGATGGCCCCAACGATCCGGCTaGACATGCGGGGCTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RWTLSISASCEKEGNVGWPQRSG*TCGAAH Trigger: GTGGGCAGCCCCGCATGTCCAGCCGGATCGTTGGGG...CCATCCCACATTCCCCTCTTTCTCACATGAAGCTGAGATGCTAAGAGTCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS-3UTR CCA 90 bp | GAGGGGAATGTGGGATGGACCAGGAAGCTCCAGATTCACATTTTCAGACCCACCGCCAGTGACCCAGCATaGAGACCCTGGTGGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: EGNVGWTRKLQIHIFRPTASDPA*RPWWWM Trigger: CATCCACCACCAGGGTCTCCATGCTGGGTCACTGGC...GGTGGGTCTGAAAATGTGAATCTGGAGCTTCCTGGTCCATCCCACATTCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR GCA 90 bp | CTTGTGGTTCCTCAGTGTCTGGCCCCTCAACCTTCAAAGTCAGCAAAGGAGATTTGGATGGGACCCTGGTaGAGGCAGGCAGACAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LVVPQCLAPQPSKSAKEIWMGPW*RQADRL Trigger: CAGCCTGTCTGCCTGCCTGCACCAGGGTCCCATCCA...AATCTCCTTTGCTGACTTTGAAGGTTGAGGGGCCAGACACTGAGGAACCACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR GCA 90 bp | GAGGGGAATGTGGGATGGACCAGGAAGCTCCAGATTCACATTTTCAGACCCACCCAAGCTGCACACTCCTaGATCCTGGTTCCTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EGNVGWTRKLQIHIFRPTQAAHS*ILVPAG Trigger: CCCTGCAGGAACCAGGATGCAGGAGTGTGCAGCTTG...GGTGGGTCTGAAAATGTGAATCTGGAGCTTCCTGGTCCATCCCACATTCCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| CDS-3UTR CCA 90 bp | CATACAGGCCAGATGAGCCAAAAGGAGAGAGCAGAGTGTAAGTGCAGGGGACTCAACAGGAGCAGGATCTaGAGGTGGGAAGCACCCCTC | + |
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Preference number: 4 (lower is better) Translates to: HTGQMSQKERAECKCRGLNRSRI*RWEAPL Trigger: GAGGGGTGCTTCCCACCTCCAGATCCTGCTCCTGTT...GAGTCCCCTGCACTTACACTCTGCTCTCTCCTTTTGGCTCATCTGGCCTGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR CCA 90 bp | ATCTGTCTGACTTCCTCCAGGATGCAAAGGGCATACAGGCCAGATGAGCCAAAATGGAGACCCTGGTGGTaGATGGGACCCTGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ICLTSSRMQRAYRPDEPKWRPWW*MGPWCR Trigger: CCTGCACCAGGGTCCCATCCACCACCAGGGTCTCCA...TTTTGGCTCATCTGGCCTGTATGCCCTTTGCATCCTGGAGGAAGTCAGACAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR CCA 90 bp | GGAGGGAAGGGGGTAGGCAGATGGACTCTTAGCATCTCAGCTTCATGTGAGAAACCTCCAGAGTCACCCTaGCAGGCATCCTTGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GGKGVGRWTLSISASCEKPPESP*QASLWP Trigger: AGGCCACAAGGATGCCTGCCAGGGTGACTCTGGAGG...TTTCTCACATGAAGCTGAGATGCTAAGAGTCCATCTGCCTACCCCCTTCCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR GCA 90 bp | GGGAATGTGGGATGGACCAGGAAGCTCCAGATTCACATTTTCAGACCCACCAGCCTCCACGGTGCTGAATaGTTGTTTGCCACGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: GNVGWTRKLQIHIFRPTSLHGAE*LFATAT Trigger: AGTGGCCGTGGCAAACAAGCATTCAGCACCGTGGAG...GCTGGTGGGTCTGAAAATGTGAATCTGGAGCTTCCTGGTCCATCCCACATTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS-3UTR GCA 90 bp | GCATCTCAGCTTCATGTGAGAAAGAGGGGAATGTGGGATGGACCAGGAAGCTCCGACGTCCAGACTCAGTaGTCCCAGGAGCACACTGTA | + |
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Preference number: 4 (lower is better) Translates to: ASQLHVRKRGMWDGPGSSDVQTQ*SQEHTV Trigger: TACAGTGTGCTCCTGGGAGCACTGAGTCTGGACGTC...GGAGCTTCCTGGTCCATCCCACATTCCCCTCTTTCTCACATGAAGCTGAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR GCA 90 bp | AGATGGACTCTTAGCATCTCAGCTTCATGTGAGAAAGAGGGGAATGTGGGATGGGGCAGACAGGCTGGATaGGGGTGCTCAGGGACACTG | + |
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Preference number: 4 (lower is better) Translates to: RWTLSISASCEKEGNVGWGRQAG*GCSGTL Trigger: CAGTGTCCCTGAGCACCCGCATCCAGCCTGTCTGCC...CCATCCCACATTCCCCTCTTTCTCACATGAAGCTGAGATGCTAAGAGTCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR GCA 90 bp | GCATCTCAGCTTCATGTGAGAAAGAGGGGAATGTGGGATGGACCAGGAAGCTCCCATCCTTGTGGCCTCTaGGGTAGCCAGCACACAAGT | + |
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Preference number: 4 (lower is better) Translates to: ASQLHVRKRGMWDGPGSSHPCGL*GSQHTS Trigger: ACTTGTGTGCTGGCTACCGCAGAGGCCACAAGGATG...GGAGCTTCCTGGTCCATCCCACATTCCCCTCTTTCTCACATGAAGCTGAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR GCA 90 bp | GGGACTATACTTGGCCACATTGGTATAGACACCTGGACGGTTGGGCAGGGCACAGTGCCAGAGAGTCTGTaGCTCAGGAAGAAAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: GTILGHIGIDTWTVGQGTVPESL*LRKKDG Trigger: GCCATCTTTCTTCCTGAGGCACAGACTCTCTGGCAC...TGTGCCCTGCCCAACCGTCCAGGTGTCTATACCAATGTGGCCAAGTATAGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| CDS-3UTR TCA 90 bp | GCCCCTCAACCTTCAAAGTCAGCAAAGGAGATTCTCCTTGGTGTAGAGTTCCTCCGTCTAGGGAAACAGTaGCCTGCCGTCAACACCCAC | + |
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Preference number: 4 (lower is better) Translates to: APQPSKSAKEILLGVEFLRLGKQ*PAVNTH Trigger: GTGGGTGTTGACGGCAGGTCACTGTTTCCCTAGACG...GAGGAACTCTACACCAAGGAGAATCTCCTTTGCTGACTTTGAAGGTTGAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR GCA 90 bp | GGGAATGTGGGATGGACCAGGAAGCTCCAGATTCACATTTTCAGACCCACCAGCCAAGCTGCACACTCCTaGATCCTGGTTCCTAACACC | + |
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Preference number: 4 (lower is better) Translates to: GNVGWTRKLQIHIFRPTSQAAHS*ILVPNT Trigger: GGTGTTAGGAACCAGGATGCAGGAGTGTGCAGCTTG...GCTGGTGGGTCTGAAAATGTGAATCTGGAGCTTCCTGGTCCATCCCACATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR CCA 90 bp | GAATGTGGGATGGACCAGGAAGCTCCAGATTCACATTTTCAGACCCACCAGCATAACAGGAGCAGGATCTaGAGGTGGGAAGCACCCCTC | + |
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Preference number: 4 (lower is better) Translates to: ECGMDQEAPDSHFQTHQHNRSRI*RWEAPL Trigger: GAGGGGTGCTTCCCACCTCCAGATCCTGCTCCTGTT...ATGCTGGTGGGTCTGAAAATGTGAATCTGGAGCTTCCTGGTCCATCCCACATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| CDS-3UTR CCA 90 bp | AGGAGAGGAGGGAAGGGGGTAGGCAGATGGACTCTTAGCATCTCAGCTTCATGTATTGGTATAGACACCTaGACGGTTGGGCAGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: RRGGKGVGRWTLSISASCIGIDT*TVGQGT Trigger: TGTGCCCTGCCCAACCGTCCAGGTGTCTATACCAAT...ACATGAAGCTGAGATGCTAAGAGTCCATCTGCCTACCCCCTTCCCTCCTCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR CCA 90 bp | GCATCTCAGCTTCATGTGAGAAAGAGGGGAATGTGGGATGGACCAGGAAGCTCCCACACTCCTGCATCCTaGTTCCTAACACCAACAGGA | + |
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Preference number: 4 (lower is better) Translates to: ASQLHVRKRGMWDGPGSSHTPAS*FLTPTG Trigger: TCCTGTTGGTGTTAGGAACCAGGATGCAGGAGTGTG...GGAGCTTCCTGGTCCATCCCACATTCCCCTCTTTCTCACATGAAGCTGAGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR CCA 90 bp | ACATTTATTAAATCGAAAAATCTGTGGATCAAAAGCTCAGGCAGCTCAGTTGCGGACCCTGGTGGTGGATaGGACCCTGGTGCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TFIKSKNLWIKSSGSSVADPGGG*DPGAGR Trigger: CCTGCCTGCACCAGGGTCCCATCCACCACCAGGGTC...CGCAACTGAGCTGCCTGAGCTTTTGATCCACAGATTTTTCGATTTAATAAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR CCA 90 bp | CCTTCAAAGTCAGCAAAGGAGATTCTCCTTGGTGTAGAGTTCCTCTTATACTTTCCCACCAGGACCCAGTaGCCAGACTCCATACAGGTC | + |
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Preference number: 4 (lower is better) Translates to: PSKSAKEILLGVEFLLYFPTRTQ*PDSIQV Trigger: GACCTGTATGGAGTCTGGCCACTGGGTCCTGGTGGG...AAAGTATAAGAGGAACTCTACACCAAGGAGAATCTCCTTTGCTGACTTTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS CCA 90 bp | ACGGCCACTCTCCATCCTGAGCATCCCGGCCCCCAACGATCCGGCTaGACATGCGGGGCTGCCCACAAGCTGCACACTCCTGCATCCTGG | + |
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Preference number: 5 (lower is better) Translates to: TATLHPEHPGPQRSG*TCGAAHKLHTPASW Trigger: CCAGGATGCAGGAGTGTGCAGCTTGTGGGCAGCCCCGCATGTCCAGCCGGATCGTTGGGGGCCGGGATGCTCAGGATGGAGAGTGGCCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS GCA 90 bp | ACTCTCCATCCTGAGCATCCCGGCCCCCAACGATCCGGCTGGACATaGGGGGCTGCCCACAAGCTGCACACTCCTGCATCCTGGTTCCTA | + |
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Preference number: 5 (lower is better) Translates to: TLHPEHPGPQRSGWT*GAAHKLHTPASWFL Trigger: TAGGAACCAGGATGCAGGAGTGTGCAGCTTGTGGGCAGCCCCGCATGTCCAGCCGGATCGTTGGGGGCCGGGATGCTCAGGATGGAGAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS-3UTR CAA 90 bp | CCAGCAGCGGCACCCTCACTCCTTGCAAGGGTCTCCCCTTTGGGAGTGGTACTCCACGGTGCTGAATGCTaGTTTGCCACGGCCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: PAAAPSLLARVSPLGVVLHGAEC*FATATL Trigger: GAGAGTGGCCGTGGCAAACAAGCATTCAGCACCGTG...GAGTACCACTCCCAAAGGGGAGACCCTTGCAAGGAGTGAGGGTGCCGCTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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| CDS-3UTR CAA 90 bp | GAGGGGAATGTGGGATGGACCAGGAAGCTCCAGATTCACATTTTCAGACCCACCGTGCTGAATGCTTGTTaGCCACGGCCACTCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: EGNVGWTRKLQIHIFRPTVLNAC*PRPLSI Trigger: GATGGAGAGTGGCCGTGGCAAACAAGCATTCAGCAC...GGTGGGTCTGAAAATGTGAATCTGGAGCTTCCTGGTCCATCCCACATTCCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS-3UTR CAA 90 bp | CAGCTTCATGTGAGAAAGAGGGGAATGTGGGATGGACCAGGAAGCTCCAGATTCCACGGTGCTGAATGCTaGTTTGCCACGGCCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: QLHVRKRGMWDGPGSSRFHGAEC*FATATL Trigger: GAGAGTGGCCGTGGCAAACAAGCATTCAGCACCGTG...GAATCTGGAGCTTCCTGGTCCATCCCACATTCCCCTCTTTCTCACATGAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS-3UTR CAA 90 bp | CAGCTTCATGTGAGAAAGAGGGGAATGTGGGATGGACCAGGAAGCTCCAGATTCGTGCTGAATGCTTGTTaGCCACGGCCACTCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: QLHVRKRGMWDGPGSSRFVLNAC*PRPLSI Trigger: GATGGAGAGTGGCCGTGGCAAACAAGCATTCAGCAC...GAATCTGGAGCTTCCTGGTCCATCCCACATTCCCCTCTTTCTCACATGAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS GCA 72 bp | CCTGAGCATCCCGGCCCCCAACGATCCGGCTGGACATaGGGGGCTGCCCACAAGCTGCACACTCCTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: PEHPGPQRSGWT*GAAHKLHTPAS Trigger: GGATGCAGGAGTGTGCAGCTTGTGGGCAGCCCCGCATGTCCAGCCGGATCGTTGGGGGCCGGGATGCTCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS CCA 72 bp | CTCCATCCTGAGCATCCCGGCCCCCAACGATCCGGCTaGACATGCGGGGCTGCCCACAAGCTGCACACTCCT | + |
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Preference number: 6 (lower is better) Translates to: LHPEHPGPQRSG*TCGAAHKLHTP Trigger: AGGAGTGTGCAGCTTGTGGGCAGCCCCGCATGTCCAGCCGGATCGTTGGGGGCCGGGATGCTCAGGATGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS CAA 72 bp | TCCGCACACATGGGCTCCACGGTGCTGAATGCTTGTTaGCCACGGCCACTCTCCATCCTGAGCATCCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SAHMGSTVLNAC*PRPLSILSIPA Trigger: GGCCGGGATGCTCAGGATGGAGAGTGGCCGTGGCAAACAAGCATTCAGCACCGTGGAGCCCATGTGTGCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS CAA 72 bp | ACCCTCCGCACACATGGGCTCCACGGTGCTGAATGCTaGTTTGCCACGGCCACTCTCCATCCTGAGCATCCC | + |
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Preference number: 6 (lower is better) Translates to: TLRTHGLHGAEC*FATATLHPEHP Trigger: GGGATGCTCAGGATGGAGAGTGGCCGTGGCAAACAAGCATTCAGCACCGTGGAGCCCATGTGTGCGGAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS GCA 72 bp | GTGACCCTCCGCACACATGGGCTCCACGGTGCTGAATaGTTGTTTGCCACGGCCACTCTCCATCCTGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: VTLRTHGLHGAE*LFATATLHPEH Trigger: ATGCTCAGGATGGAGAGTGGCCGTGGCAAACAAGCATTCAGCACCGTGGAGCCCATGTGTGCGGAGGGTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059906.8 ENSMUST00000115444.3 |
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| CDS TCA 72 bp | GTCCAGACTCAGTGCTCCCAGGAGCACACTGTACTCTaGCGGCCATACCCGTCTAGGGAAACAGTGACCTGC | + |
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Preference number: 6 (lower is better) Translates to: VQTQCSQEHTVL*RPYPSRETVTC Trigger: GCAGGTCACTGTTTCCCTAGACGGGTATGGCCGTCAGAGTACAGTGTGCTCCTGGGAGCACTGAGTCTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS TCA 72 bp | CTGTACTCTGACGGCCATACCCGTCTAGGGAAACAGTaGCCTGCCGTCAACACCCACTGGGGTGCAATGAGT | + |
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Preference number: 6 (lower is better) Translates to: LYSDGHTRLGKQ*PAVNTHWGAMS Trigger: ACTCATTGCACCCCAGTGGGTGTTGACGGCAGGTCACTGTTTCCCTAGACGGGTATGGCCGTCAGAGTACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059906.8 |
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| CDS GCA 72 bp | AATTCGGAGAGACCAAGGACAGTGCCAGAGAGTCTGTaGCTCAGGAAGAAAGATGGCCCACAATGCTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: NSERPRTVPESL*LRKKDGPQCSR Trigger: TCTAGAGCATTGTGGGCCATCTTTCTTCCTGAGGCACAGACTCTCTGGCACTGTCCTTGGTCTCTCCGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115444.3 |
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