Pregenerated sensors for PRSS32 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048992Ensembl transcript IDs: ENSMUST00000061725.8, ENSMUST00000154347.2, ENSMUST00000233370.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTGGCCTGTGCTCCACCCAGGAGTGAGAGGCATGAAGTCCCTCTaGCCCTGGAAACCCACAGGCCCCAAGGGTGTGAGAGGCAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: LWPVLHPGVRGMKSL*PWKPTGPKGVRGSS Trigger: TGAGCTGCCTCTCACACCCTTGGGGCCTGTGGGTTTCCAGGGGCAGAGGGACTTCATGCCTCTCACTCCTGGGTGGAGCACAGGCCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR TCA 90 bp | AGGGTGGTGGGAGCGGTTGATTTGTGCCAATGTGTCCCCAGCCAGTaGCCCAGCACATGGTGCCAGGATCCAGGGGGTCGCCAGGTTTCG | + |
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Preference number: 1 (lower is better) Translates to: RVVGAVDLCQCVPSQ*PSTWCQDPGGRQVS Trigger: CGAAACCTGGCGACCCCCTGGATCCTGGCACCATGTGCTGGGTCACTGGCTGGGGACACATTGGCACAAATCAACCGCTCCCACCACCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| 3UTR GCA 90 bp | GATGGGGTGAGGAGAGGGTCCCTAAAGGACACAGCATGGATGGGGTaGTTGTCTGAAGGTAGCTGTGCAAGGAGGGCACAGGAGGGCGTC | + |
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Preference number: 1 (lower is better) Translates to: DGVRRGSLKDTAWMG*LSEGSCARRAQEGV Trigger: GACGCCCTCCTGTGCCCTCCTTGCACAGCTACCTTCAGACAAGCACCCCATCCATGCTGTGTCCTTTAGGGACCCTCTCCTCACCCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR TCA 90 bp | AGAGGCACCTGCAACTCCTGCAGGGTAAAGGGTGGTGGGAGCGGTTaGTTTGTGCCAATGTGTCCCCAGCCAGTGACCCAGCACATGGTG | + |
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Preference number: 1 (lower is better) Translates to: RGTCNSCRVKGGGSG*FVPMCPQPVTQHMV Trigger: CACCATGTGCTGGGTCACTGGCTGGGGACACATTGGCACAAATCAACCGCTCCCACCACCCTTTACCCTGCAGGAGTTGCAGGTGCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| 3UTR CCA 90 bp | GAGGCTTCTGATGGGGTGAGGAGAGGGTCCCTAAAGGACACAGCATaGATGGGGTGCTTGTCTGAAGGTAGCTGTGCAAGGAGGGCACAG | + |
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Preference number: 1 (lower is better) Translates to: EASDGVRRGSLKDTA*MGCLSEGSCARRAQ Trigger: CTGTGCCCTCCTTGCACAGCTACCTTCAGACAAGCACCCCATCCATGCTGTGTCCTTTAGGGACCCTCTCCTCACCCCATCAGAAGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR TCA 90 bp | TTTCGGGAGGCAGACTGGAAGCATGTAGTCATTGAAGGAGATGGGTaGAGCCAGCTGCACCAGGGCAATGTCTCCACTGCTGTGCTCGTC | + |
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Preference number: 1 (lower is better) Translates to: FREADWKHVVIEGDG*SQLHQGNVSTAVLV Trigger: GACGAGCACAGCAGTGGAGACATTGCCCTGGTGCAGCTGGCTTCACCCATCTCCTTCAATGACTACATGCTTCCAGTCTGCCTCCCGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| 3UTR TCA 90 bp | CTGATGGTCCCAAGGATCTTAATGATGTGGGAGTTAGGAGGCTTCTaGTGGGGTGAGGAGAGGGTCCCTAAAGGACACAGCATGGATGGG | + |
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Preference number: 1 (lower is better) Translates to: LMVPRILMMWELGGF*WGEERVPKGHSMDG Trigger: CCCATCCATGCTGTGTCCTTTAGGGACCCTCTCCTCACCCCATCAGAAGCCTCCTAACTCCCACATCATTAAGATCCTTGGGACCATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR CCA 90 bp | AGAGTGGAGTCCCTGAAAGGCTGGGGGAAAAACCTCTTCCTTCCATaGGTAAATTCCACATTGTGTTCTGAATCCATGAGATGTAGACAC | + |
|
Preference number: 1 (lower is better) Translates to: RVESLKGWGKNLFLP*VNSTLCSESMRCRH Trigger: GTGTCTACATCTCATGGATTCAGAACACAATGTGGAATTTACCCATGGAAGGAAGAGGTTTTTCCCCCAGCCTTTCAGGGACTCCACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000154347.2 ENSMUST00000233370.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGCCTGTGCTCCACCCAGGAGTGAGAGGCATGAAGTCCCTCTGCCCCTGGAAGAGTTAGGAGGCTTCTaGTGGGGTGAGGAGAGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: VACAPPRSERHEVPLPLEELGGF*WGEERV Trigger: GACCCTCTCCTCACCCCATCAGAAGCCTCCTAACTC...TTCCAGGGGCAGAGGGACTTCATGCCTCTCACTCCTGGGTGGAGCACAGGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGTGAGAGGCATGAAGTCCCTCTGCCCCTGGAAACCCACAGGCCCCAAGGGTGAGTTAGGAGGCTTCTaGTGGGGTGAGGAGAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: GVRGMKSLCPWKPTGPKGELGGF*WGEERV Trigger: GACCCTCTCCTCACCCCATCAGAAGCCTCCTAACTC...ACCCTTGGGGCCTGTGGGTTTCCAGGGGCAGAGGGACTTCATGCCTCTCACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR-3UTR TCA 90 bp | GACACCACCAAAGGATACCCTGAAAGATGGCTGTGGCCTGTGCTCCACCCAGGACAGGCCCCAAGGGTGTaGGAGGCAGCTCAGGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: DTTKGYPERWLWPVLHPGQAPRV*EAAQGP Trigger: TGGACCCTGAGCTGCCTCTCACACCCTTGGGGCCTG...TCCTGGGTGGAGCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR CAA 90 bp | GGGGTGAGGAGAGGGTCCCTAAAGGACACAGCATGGATGGGGTGCTaGTCTGAAGGTAGCTGTGCAAGGAGGGCACAGGAGGGCGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GVRRGSLKDTAWMGC*SEGSCARRAQEGVC Trigger: ACAGACGCCCTCCTGTGCCCTCCTTGCACAGCTACCTTCAGACAAGCACCCCATCCATGCTGTGTCCTTTAGGGACCCTCTCCTCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR CAA 90 bp | GAGAGGCACCTGCAACTCCTGCAGGGTAAAGGGTGGTGGGAGCGGTaGATTTGTGCCAATGTGTCCCCAGCCAGTGACCCAGCACATGGT | + |
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Preference number: 2 (lower is better) Translates to: ERHLQLLQGKGWWER*ICANVSPASDPAHG Trigger: ACCATGTGCTGGGTCACTGGCTGGGGACACATTGGCACAAATCAACCGCTCCCACCACCCTTTACCCTGCAGGAGTTGCAGGTGCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGGAGTGAGAGGCATGAAGTCCCTCTGCCCCTGGAAACCCACAGGCCCCCTAAAGGACACAGCATaGATGGGGTGCTTGTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HPGVRGMKSLCPWKPTGPLKDTA*MGCLSE Trigger: TTCAGACAAGCACCCCATCCATGCTGTGTCCTTTAG...GGGGCCTGTGGGTTTCCAGGGGCAGAGGGACTTCATGCCTCTCACTCCTGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCTGGAAACCAGCACACAGCATGCCTTCAAGGATGACTGGCTCCGTGCCGAGGACACAGCATGGATaGGGTGCTTGTCTGAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: PSWKPAHSMPSRMTGSVPRTQHG*GACLKV Trigger: TACCTTCAGACAAGCACCCCATCCATGCTGTGTCCT...CGGCACGGAGCCAGTCATCCTTGAAGGCATGCTGTGTGCTGGTTTCCAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233370.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAACAGGCCCAAGAGTGGAGTCCCTGAAAGGCTGGGGGAAAAACCTCTTCCTGAAGCATGTAGTCATTaGAGGAGATGGGTGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SNRPKSGVPERLGEKPLPEACSH*RRWVKP Trigger: TGGCTTCACCCATCTCCTTCAATGACTACATGCTTC...AGGAAGAGGTTTTTCCCCCAGCCTTTCAGGGACTCCACTCTTGGGCCTGTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| 3UTR-3UTR CCA 90 bp | TACACTAGAGAAAGACTTGCCTGGTCACAGACACCACCAAAGGATACCCTGAAAAAGTCCCTCTGCCCCTaGAAACCCACAGGCCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: YTRERLAWSQTPPKDTLKKSLCP*KPTGPK Trigger: CTTGGGGCCTGTGGGTTTCCAGGGGCAGAGGGACTT...TTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAGGCAAGTCTTTCTCTAGTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR-3UTR TCA 90 bp | CAGACATCATTAATGTCACAGACTAGGGGACCTCCGGAATCACCATTACAAGCAATTGAAGGAGATGGGTaGAGCCAGCTGCACCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: QTSLMSQTRGPPESPLQAIEGDG*SQLHQG Trigger: GCCCTGGTGCAGCTGGCTTCACCCATCTCCTTCAAT...TGCTTGTAATGGTGATTCCGGAGGTCCCCTAGTCTGTGACATTAATGATGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACAATCAGATCCCCAACTCACCACCCCTGCCTGGATCCAGACATCATTAATTCAATGAGAGGCACCTaGAACTCCTGCAGGGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: STIRSPTHHPCLDPDIINSMRGT*NSCRVK Trigger: CTTTACCCTGCAGGAGTTGCAGGTGCCTCTCATTGA...ATTAATGATGTCTGGATCCAGGCAGGGGTGGTGAGTTGGGGATCTGATTGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGGGGAAAAACCTCTTCCTTCCATGGGTAAATTCCACATTGTGTTCTGAACTGCAGGGTAAAGGGTaGTGGGAGCGGTTGATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: GWGKNLFLPWVNSTLCSELQGKG*WERLIC Trigger: ACAAATCAACCGCTCCCACCACCCTTTACCCTGCAG...TTCAGAACACAATGTGGAATTTACCCATGGAAGGAAGAGGTTTTTCCCCCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| 3UTR-3UTR CCA 90 bp | GATCCAGTCTTTATTGTTTCAGACACAGATACACTAGAGAAAGACTTGCCTGGTAGGACACAGCATGGATaGGGTGCTTGTCTGAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: DPVFIVSDTDTLEKDLPGRTQHG*GACLKV Trigger: TACCTTCAGACAAGCACCCCATCCATGCTGTGTCCT...ACCAGGCAAGTCTTTCTCTAGTGTATCTGTGTCTGAAACAATAAAGACTGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR CCA 72 bp | CACCCAGGAGTGAGAGGCATGAAGTCCCTCTGCCCCTaGAAACCCACAGGCCCCAAGGGTGTGAGAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: HPGVRGMKSLCP*KPTGPKGVRGS Trigger: GCTGCCTCTCACACCCTTGGGGCCTGTGGGTTTCCAGGGGCAGAGGGACTTCATGCCTCTCACTCCTGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR GCA 72 bp | GTGCTCCACCCAGGAGTGAGAGGCATGAAGTCCCTCTaGCCCTGGAAACCCACAGGCCCCAAGGGTGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: VLHPGVRGMKSL*PWKPTGPKGVR Trigger: TCTCACACCCTTGGGGCCTGTGGGTTTCCAGGGGCAGAGGGACTTCATGCCTCTCACTCCTGGGTGGAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR CCA 72 bp | CACAGGAGGGCGTCTGTGAGAGAAGCTGTGCTGGCCTaGAAGCCGGTCGAGGGGAACAGTTCCAGATACAGG | + |
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Preference number: 3 (lower is better) Translates to: HRRASVREAVLA*KPVEGNSSRYR Trigger: CCTGTATCTGGAACTGTTCCCCTCGACCGGCTTCCAGGCCAGCACAGCTTCTCTCACAGACGCCCTCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR TCA 72 bp | TGCAACTCCTGCAGGGTAAAGGGTGGTGGGAGCGGTTaGTTTGTGCCAATGTGTCCCCAGCCAGTGACCCAG | + |
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Preference number: 3 (lower is better) Translates to: CNSCRVKGGGSG*FVPMCPQPVTQ Trigger: CTGGGTCACTGGCTGGGGACACATTGGCACAAATCAACCGCTCCCACCACCCTTTACCCTGCAGGAGTTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| 3UTR CCA 72 bp | CTGGTCACAGACACCACCAAAGGATACCCTGAAAGATaGCTGTGGCCTGTGCTCCACCCAGGAGTGAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: LVTDTTKGYPER*LWPVLHPGVRG Trigger: GCCTCTCACTCCTGGGTGGAGCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR TCA 72 bp | GACTTGCCTGGTCACAGACACCACCAAAGGATACCCTaGAAGATGGCTGTGGCCTGTGCTCCACCCAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: DLPGHRHHQRIP*KMAVACAPPRS Trigger: ACTCCTGGGTGGAGCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAGGCAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR TCA 72 bp | CTTCCTGGAAACCAGCACACAGCATGCCTTCAAGGATaGCTGGCTCCGTGCCGGGAATGGAGTTCTCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: LPGNQHTACLQG*LAPCREWSSPG Trigger: ACCAGGAGAACTCCATTCCCGGCACGGAGCCAGTCATCCTTGAAGGCATGCTGTGTGCTGGTTTCCAGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154347.2 ENSMUST00000233370.2 |
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| 3UTR GCA 72 bp | AGGAGAGGGTCCCTAAAGGACACAGCATGGATGGGGTaGTTGTCTGAAGGTAGCTGTGCAAGGAGGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: RRGSLKDTAWMG*LSEGSCARRAQ Trigger: CTGTGCCCTCCTTGCACAGCTACCTTCAGACAAGCACCCCATCCATGCTGTGTCCTTTAGGGACCCTCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR CCA 72 bp | GATGGGGTGAGGAGAGGGTCCCTAAAGGACACAGCATaGATGGGGTGCTTGTCTGAAGGTAGCTGTGCAAGG | + |
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Preference number: 3 (lower is better) Translates to: DGVRRGSLKDTA*MGCLSEGSCAR Trigger: CCTTGCACAGCTACCTTCAGACAAGCACCCCATCCATGCTGTGTCCTTTAGGGACCCTCTCCTCACCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR CCA 72 bp | ACAGACACCACCAAAGGATACCCTGAAAGATGGCTGTaGCCTGTGCTCCACCCAGGAGTGAGAGGCATGAAG | + |
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Preference number: 3 (lower is better) Translates to: TDTTKGYPERWL*PVLHPGVRGMK Trigger: CTTCATGCCTCTCACTCCTGGGTGGAGCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| 3UTR CCA 72 bp | CTGGAAACCAGCACACAGCATGCCTTCAAGGATGACTaGCTCCGTGCCGGGAATGGAGTTCTCCTGGTAGTA | + |
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Preference number: 3 (lower is better) Translates to: LETSTQHAFKDD*LRAGNGVLLVV Trigger: TACTACCAGGAGAACTCCATTCCCGGCACGGAGCCAGTCATCCTTGAAGGCATGCTGTGTGCTGGTTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154347.2 ENSMUST00000233370.2 |
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| 3UTR TCA 72 bp | GCAGACTGGAAGCATGTAGTCATTGAAGGAGATGGGTaGAGCCAGCTGCACCAGGGCAATGTCTCCACTGCT | + |
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Preference number: 3 (lower is better) Translates to: ADWKHVVIEGDG*SQLHQGNVSTA Trigger: AGCAGTGGAGACATTGCCCTGGTGCAGCTGGCTTCACCCATCTCCTTCAATGACTACATGCTTCCAGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| 3UTR TCA 72 bp | CCAAGGATCTTAATGATGTGGGAGTTAGGAGGCTTCTaGTGGGGTGAGGAGAGGGTCCCTAAAGGACACAGC | + |
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Preference number: 3 (lower is better) Translates to: PRILMMWELGGF*WGEERVPKGHS Trigger: GCTGTGTCCTTTAGGGACCCTCTCCTCACCCCATCAGAAGCCTCCTAACTCCCACATCATTAAGATCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR GCA 90 bp | AACACCTGGCCTCTTGAACAGAGCACAATCAGATCCCCAACTCACCACCCCTGCACAGGGACTGGCCCCTaGCAAGGCCACCGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: NTWPLEQSTIRSPTHHPCTGTGP*QGHRPS Trigger: GCTGGGCCGGTGGCCTTGGCAGGGGCCAGTCCCTGT...GCAGGGGTGGTGAGTTGGGGATCTGATTGTGCTCTGTTCAAGAGGCCAGGTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| CDS-3UTR CCA 90 bp | GAAGTCCCTCTGCCCCTGGAAACCCACAGGCCCCAAGGGTGTGAGAGGCAGCTCGACAGGGACTGGCCCTaGTTGAAGCAATGGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EVPLPLETHRPQGCERQLDRDWP*LKQWAA Trigger: TGCTGCCCATTGCTTCAACCAGGGCCAGTCCCTGTC...GAGCTGCCTCTCACACCCTTGGGGCCTGTGGGTTTCCAGGGGCAGAGGGACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR TCA 90 bp | GCCTGTGCTCCACCCAGGAGTGAGAGGCATGAAGTCCCTCTGCCCCTGGAAACCATTGAAGGAGATGGGTaGAGCCAGCTGCACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: ACAPPRSERHEVPLPLETIEGDG*SQLHQG Trigger: GCCCTGGTGCAGCTGGCTTCACCCATCTCCTTCAAT...GGTTTCCAGGGGCAGAGGGACTTCATGCCTCTCACTCCTGGGTGGAGCACAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR CCA 90 bp | GAGAGGCATGAAGTCCCTCTGCCCCTGGAAACCCACAGGCCCCAAGGGTGTGAGGACAGGGACTGGCCCTaGTTGAAGCAATGGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: ERHEVPLPLETHRPQGCEDRDWP*LKQWAA Trigger: TGCTGCCCATTGCTTCAACCAGGGCCAGTCCCTGTC...CTCACACCCTTGGGGCCTGTGGGTTTCCAGGGGCAGAGGGACTTCATGCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR TCA 90 bp | CTGAAGGTAGCTGTGCAAGGAGGGCACAGGAGGGCGTCTGTGAGAGAAGCTGTGGGGACTGGCCCTGGTTaGAGCAATGGGCAGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LKVAVQGGHRRASVREAVGTGPG*SNGQQS Trigger: TGACTGCTGCCCATTGCTTCAACCAGGGCCAGTCCC...CACAGCTTCTCTCACAGACGCCCTCCTGTGCCCTCCTTGCACAGCTACCTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR CCA 90 bp | GTAGCTGTGCAAGGAGGGCACAGGAGGGCGTCTGTGAGAGAAGCTGTGCTGGCCCCCTGGTTGAAGCAATaGGCAGCAGTCAACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: VAVQGGHRRASVREAVLAPWLKQ*AAVNTQ Trigger: CTGGGTGTTGACTGCTGCCCATTGCTTCAACCAGGG...GGCCAGCACAGCTTCTCTCACAGACGCCCTCCTGTGCCCTCCTTGCACAGCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR CCA 90 bp | GAGAGGCATGAAGTCCCTCTGCCCCTGGAAACCCACAGGCCCCAAGGGTGTGAGCAGGGTAAAGGGTGGTaGGAGCGGTTGATTTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: ERHEVPLPLETHRPQGCEQGKGW*ERLICA Trigger: GGCACAAATCAACCGCTCCCACCACCCTTTACCCTG...CTCACACCCTTGGGGCCTGTGGGTTTCCAGGGGCAGAGGGACTTCATGCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR CCA 90 bp | CTCTGCCCCTGGAAACCCACAGGCCCCAAGGGTGTGAGAGGCAGCTCAGGGTCCTCCTTCTTGCCTTCCTaGAAACCAGCACACAGCATG | + |
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Preference number: 4 (lower is better) Translates to: LCPWKPTGPKGVRGSSGSSFLPS*KPAHSM Trigger: CATGCTGTGTGCTGGTTTCCAGGAAGGCAAGAAGGA...GGACCCTGAGCTGCCTCTCACACCCTTGGGGCCTGTGGGTTTCCAGGGGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR TCA 90 bp | CACAGGAGGGCGTCTGTGAGAGAAGCTGTGCTGGCCTGGAAGCCGGTCGAGGGGGAAGCATGTAGTCATTaGAGGAGATGGGTGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HRRASVREAVLAWKPVEGEACSH*RRWVKP Trigger: TGGCTTCACCCATCTCCTTCAATGACTACATGCTTC...CCCCTCGACCGGCTTCCAGGCCAGCACAGCTTCTCTCACAGACGCCCTCCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR TCA 90 bp | GCCTGGTCACAGACACCACCAAAGGATACCCTGAAAGATGGCTGTGGCCTGTGCGCATGCCTTCAAGGATaGCTGGCTCCGTGCCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: AWSQTPPKDTLKDGCGLCACLQG*LAPCRE Trigger: TTCCCGGCACGGAGCCAGTCATCCTTGAAGGCATGC...GCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR GCA 90 bp | TGGCTGTGGCCTGTGCTCCACCCAGGAGTGAGAGGCATGAAGTCCCTCTGCCCCTCAATGAGAGGCACCTaGAACTCCTGCAGGGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: WLWPVLHPGVRGMKSLCPSMRGT*NSCRVK Trigger: CTTTACCCTGCAGGAGTTGCAGGTGCCTCTCATTGA...GGGGCAGAGGGACTTCATGCCTCTCACTCCTGGGTGGAGCACAGGCCACAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR TCA 90 bp | CTGAAGGTAGCTGTGCAAGGAGGGCACAGGAGGGCGTCTGTGAGAGAAGCTGTGGGGACGTCCACACACTaGGTCCAAGTCAATGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LKVAVQGGHRRASVREAVGTSTH*VQVNAP Trigger: AGGAGCATTGACTTGGACTCAGTGTGTGGACGTCCC...CACAGCTTCTCTCACAGACGCCCTCCTGTGCCCTCCTTGCACAGCTACCTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR TCA 90 bp | TCACAGACACCACCAAAGGATACCCTGAAAGATGGCTGTGGCCTGTGCTCCACCGGGACTGGCCCTGGTTaGAGCAATGGGCAGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SQTPPKDTLKDGCGLCSTGTGPG*SNGQQS Trigger: TGACTGCTGCCCATTGCTTCAACCAGGGCCAGTCCC...GGTGGAGCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR TCA 90 bp | GCCTGGTCACAGACACCACCAAAGGATACCCTGAAAGATGGCTGTGGCCTGTGCATTGAAGGAGATGGGTaGAGCCAGCTGCACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: AWSQTPPKDTLKDGCGLCIEGDG*SQLHQG Trigger: GCCCTGGTGCAGCTGGCTTCACCCATCTCCTTCAAT...GCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR TCA 90 bp | CACCCAGGAGTGAGAGGCATGAAGTCCCTCTGCCCCTGGAAACCCACAGGCCCCGAAGCATGTAGTCATTaGAGGAGATGGGTGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HPGVRGMKSLCPWKPTGPEACSH*RRWVKP Trigger: TGGCTTCACCCATCTCCTTCAATGACTACATGCTTC...GGGGCCTGTGGGTTTCCAGGGGCAGAGGGACTTCATGCCTCTCACTCCTGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR CCA 90 bp | GACACCACCAAAGGATACCCTGAAAGATGGCTGTGGCCTGTGCTCCACCCAGGATGCGGCCTGATGTCCTaGGACGTCCACACACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: DTTKGYPERWLWPVLHPGCGLMS*DVHTLS Trigger: ACTCAGTGTGTGGACGTCCCAGGACATCAGGCCGCA...TCCTGGGTGGAGCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR CCA 90 bp | AGCTGTGCAAGGAGGGCACAGGAGGGCGTCTGTGAGAGAAGCTGTGCTGGCCTGCTCACCACCCCTGCCTaGATCCAGACATCATTAATG | + |
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Preference number: 4 (lower is better) Translates to: SCARRAQEGVCERSCAGLLTTPA*IQTSLM Trigger: CATTAATGATGTCTGGATCCAGGCAGGGGTGGTGAG...CAGGCCAGCACAGCTTCTCTCACAGACGCCCTCCTGTGCCCTCCTTGCACAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR TCA 90 bp | GACACCACCAAAGGATACCCTGAAAGATGGCTGTGGCCTGTGCTCCACCCAGGACAAGAGTGGAGTCCCTaGAAGGCTGGGGGAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: DTTKGYPERWLWPVLHPGQEWSP*KAGGKT Trigger: GGTTTTTCCCCCAGCCTTTCAGGGACTCCACTCTTG...TCCTGGGTGGAGCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGTCACAGACACCACCAAAGGATACCCTGAAAGATGGCTGTGGCCTGTGCATGGGTGAAGCCAGCTaGACCAGGGCAATGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: AWSQTPPKDTLKDGCGLCMGEAS*TRAMSP Trigger: TGGAGACATTGCCCTGGTGCAGCTGGCTTCACCCAT...GCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR GCA 90 bp | GGTAGCTGTGCAAGGAGGGCACAGGAGGGCGTCTGTGAGAGAAGCTGTGCTGGCTACAAGCATCCTTCTTaGCTTCCTGGAAACCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: GSCARRAQEGVCERSCAGYKHPS*LPGNQH Trigger: GTGCTGGTTTCCAGGAAGGCAAGAAGGATGCTTGTA...GCCAGCACAGCTTCTCTCACAGACGCCCTCCTGTGCCCTCCTTGCACAGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR CCA 90 bp | CTGGTCACAGACACCACCAAAGGATACCCTGAAAGATGGCTGTGGCCTGTGCTCTGCGGCCTGATGTCCTaGGACGTCCACACACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LVTDTTKGYPERWLWPVLCGLMS*DVHTLS Trigger: ACTCAGTGTGTGGACGTCCCAGGACATCAGGCCGCA...GAGCACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR GCA 90 bp | TGCCTGGTCACAGACACCACCAAAGGATACCCTGAAAGATGGCTGTGGCCTGTGATGGGTGAAGCCAGCTaGACCAGGGCAATGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: CLVTDTTKGYPERWLWPVMGEAS*TRAMSP Trigger: TGGAGACATTGCCCTGGTGCAGCTGGCTTCACCCAT...CACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR CCA 90 bp | AACACCTGGCCTCTTGAACAGAGCACAATCAGATCCCCAACTCACCACCCCTGCCCCTGGTTGAAGCAATaGGCAGCAGTCAACACCCAG | + |
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Preference number: 4 (lower is better) Translates to: NTWPLEQSTIRSPTHHPCPWLKQ*AAVNTQ Trigger: CTGGGTGTTGACTGCTGCCCATTGCTTCAACCAGGG...GCAGGGGTGGTGAGTTGGGGATCTGATTGTGCTCTGTTCAAGAGGCCAGGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233370.2 |
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| CDS-3UTR TCA 90 bp | GGGGACCTCCGGAATCACCATTACAAGCATCCTTCTTGCCTTCCTGGAAACCAGGGGACGTCCACACACTaGGTCCAAGTCAATGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GDLRNHHYKHPSCLPGNQGTSTH*VQVNAP Trigger: AGGAGCATTGACTTGGACTCAGTGTGTGGACGTCCC...CTGGTTTCCAGGAAGGCAAGAAGGATGCTTGTAATGGTGATTCCGGAGGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154347.2 ENSMUST00000233370.2 |
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| CDS-3UTR CCA 90 bp | AGCACAATCAGATCCCCAACTCACCACCCCTGCCTGGATCCAGACATCATTAATGCTGTCAGAGTCGGTTaGGAGGACCTCACTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: STIRSPTHHPCLDPDIINAVRVG*EDLTPQ Trigger: CTGGGGAGTGAGGTCCTCCCAACCGACTCTGACAGC...ATTAATGATGTCTGGATCCAGGCAGGGGTGGTGAGTTGGGGATCTGATTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| CDS-3UTR CCA 90 bp | AGCACAATCAGATCCCCAACTCACCACCCCTGCCTGGATCCAGACATCATTAATTGCGGCCTGATGTCCTaGGACGTCCACACACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: STIRSPTHHPCLDPDIINCGLMS*DVHTLS Trigger: ACTCAGTGTGTGGACGTCCCAGGACATCAGGCCGCA...ATTAATGATGTCTGGATCCAGGCAGGGGTGGTGAGTTGGGGATCTGATTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154347.2 ENSMUST00000233370.2 |
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| CDS-3UTR GCA 90 bp | TACACTAGAGAAAGACTTGCCTGGTCACAGACACCACCAAAGGATACCCTGAAAGGCACCTGCAACTCCTaGAGGGTAAAGGGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: YTRERLAWSQTPPKDTLKGTCNS*RVKGGG Trigger: CCCACCACCCTTTACCCTGCAGGAGTTGCAGGTGCC...TTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAGGCAAGTCTTTCTCTAGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR CCA 90 bp | TACACTAGAGAAAGACTTGCCTGGTCACAGACACCACCAAAGGATACCCTGAAAGCTGTCAGAGTCGGTTaGGAGGACCTCACTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: YTRERLAWSQTPPKDTLKAVRVG*EDLTPQ Trigger: CTGGGGAGTGAGGTCCTCCCAACCGACTCTGACAGC...TTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAGGCAAGTCTTTCTCTAGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR CCA 90 bp | TGCCTGGTCACAGACACCACCAAAGGATACCCTGAAAGATGGCTGTGGCCTGTGGTTGGTGTAAACACCTaGCCTCTTGAACAGAGCACA | + |
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Preference number: 4 (lower is better) Translates to: CLVTDTTKGYPERWLWPVVGVNT*PLEQST Trigger: TGTGCTCTGTTCAAGAGGCCAGGTGTTTACACCAAC...CACAGGCCACAGCCATCTTTCAGGGTATCCTTTGGTGGTGTCTGTGACCAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR CCA 90 bp | CACAGATACACTAGAGAAAGACTTGCCTGGTCACAGACACCACCAAAGGATACCCTGCAGGGTAAAGGGTaGTGGGAGCGGTTGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: HRYTRERLAWSQTPPKDTLQGKG*WERLIC Trigger: ACAAATCAACCGCTCCCACCACCCTTTACCCTGCAG...GGTATCCTTTGGTGGTGTCTGTGACCAGGCAAGTCTTTCTCTAGTGTATCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS-3UTR TCA 90 bp | CTGCCCGATCCAGTCTTTATTGTTTCAGACACAGATACACTAGAGAAAGACTTGGGGACGTCCACACACTaGGTCCAAGTCAATGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LPDPVFIVSDTDTLEKDLGTSTH*VQVNAP Trigger: AGGAGCATTGACTTGGACTCAGTGTGTGGACGTCCC...CAAGTCTTTCTCTAGTGTATCTGTGTCTGAAACAATAAAGACTGGATCGGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS-3UTR CCA 90 bp | CACAGATACACTAGAGAAAGACTTGCCTGGTCACAGACACCACCAAAGGATACCAACCTCTTCCTTCCATaGGTAAATTCCACATTGTGT | + |
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Preference number: 4 (lower is better) Translates to: HRYTRERLAWSQTPPKDTNLFLP*VNSTLC Trigger: ACACAATGTGGAATTTACCCATGGAAGGAAGAGGTT...GGTATCCTTTGGTGGTGTCTGTGACCAGGCAAGTCTTTCTCTAGTGTATCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS TCA 90 bp | CAATCAGAGATCCCCCACACACGTGCGCCCCATTCTCCCGCACGCTaGCCTGCCAAGGCCACCGGCCCAGCTGGGCATCTTGTCCTGACA | + |
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Preference number: 5 (lower is better) Translates to: QSEIPHTRAPHSPAR*PAKATGPAGHLVLT Trigger: TGTCAGGACAAGATGCCCAGCTGGGCCGGTGGCCTTGGCAGGTCAGCGTGCGGGAGAATGGGGCGCACGTGTGTGGGGGATCTCTGATTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS TCA 90 bp | AGGCACCTGCAACTCGTTGATTTGTGCCAATGTGTCCCCAGCCAGTaGCCCAGCACATGGTGCCAGGATCCAGGGGGTCGCCAGGTTTCG | + |
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Preference number: 5 (lower is better) Translates to: RHLQLVDLCQCVPSQ*PSTWCQDPGGRQVS Trigger: CGAAACCTGGCGACCCCCTGGATCCTGGCACCATGTGCTGGGTCACTGGCTGGGGACACATTGGCACAAATCAACGAGTTGCAGGTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233370.2 |
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| CDS-3UTR CAA 90 bp | GGTAGCTGTGCAAGGAGGGCACAGGAGGGCGTCTGTGAGAGAAGCTGTGCTGGCTTACAAGCATCCTTCTaGCCTTCCTGGAAACCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GSCARRAQEGVCERSCAGLQASF*PSWKPA Trigger: TGCTGGTTTCCAGGAAGGCAAGAAGGATGCTTGTAA...GCCAGCACAGCTTCTCTCACAGACGCCCTCCTGTGCCCTCCTTGCACAGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061725.8 |
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| CDS TCA 72 bp | ATCCCCCACACACGTGCGCCCCATTCTCCCGCACGCTaGCCTGCCAAGGCCACCGGCCCAGCTGGGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: IPHTRAPHSPAR*PAKATGPAGHL Trigger: AAGATGCCCAGCTGGGCCGGTGGCCTTGGCAGGTCAGCGTGCGGGAGAATGGGGCGCACGTGTGTGGGGGAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS CCA 72 bp | ACAGGGACTGGCCCCTGCCAAGGCCACCGGCCCAGCTaGGCATCTTGTCCTGACACGATGCGGCCTGATGTC | + |
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Preference number: 6 (lower is better) Translates to: TGTGPCQGHRPS*ASCPDTMRPDV Trigger: GACATCAGGCCGCATCGTGTCAGGACAAGATGCCCAGCTGGGCCGGTGGCCTTGGCAGGGGCCAGTCCCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154347.2 |
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| CDS GCA 72 bp | GCCACCGGCCCAGCTGGGCATCTTGTCCTGACACGATaGGGCCTGATGTCCTGGGACGTCCACACACTGAGT | + |
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Preference number: 6 (lower is better) Translates to: ATGPAGHLVLTR*GLMSWDVHTLS Trigger: ACTCAGTGTGTGGACGTCCCAGGACATCAGGCCGCATCGTGTCAGGACAAGATGCCCAGCTGGGCCGGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061725.8 ENSMUST00000154347.2 ENSMUST00000233370.2 |
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| CDS GCA 72 bp | ACCCAGTCCTCAGCAATCAGAGATCCCCCACACACGTaGGCCCCATTCTCCCGCACGCTGACCTGCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: TQSSAIRDPPHT*APFSRTLTCQG Trigger: GCCTTGGCAGGTCAGCGTGCGGGAGAATGGGGCGCACGTGTGTGGGGGATCTCTGATTGCTGAGGACTGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061725.8 ENSMUST00000233370.2 |
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| CDS CCA 72 bp | GGGCATCTTGTCCTGACACGATGCGGCCTGATGTCCTaGGACGTCCACACACTGAGTCCAAGTCAATGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GHLVLTRCGLMS*DVHTLSPSQCS Trigger: GGAGCATTGACTTGGACTCAGTGTGTGGACGTCCCAGGACATCAGGCCGCATCGTGTCAGGACAAGATGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061725.8 ENSMUST00000154347.2 ENSMUST00000233370.2 |
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