Pregenerated sensors for PRSS30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024124Ensembl transcript IDs: ENSMUST00000024936.11, ENSMUST00000135549.8, ENSMUST00000147626.2, ENSMUST00000151448.8, ENSMUST00000234765.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTaGAGGACACTTGCCATGTCTGTTTCTGCAATGGGCAGAAACCTG | + |
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Preference number: 1 (lower is better) Translates to: IFSQSSESKRGTANS*RTLAMSVSAMGRNL Trigger: CAGGTTTCTGCCCATTGCAGAAACAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| 3UTR TCA 90 bp | AACCACCATTGGAGATTCATTTTCTCCGTGTCTATGTTGAGCTTCTaGGTCTCCGAGCCCAGCAGAAGAGGATCTAGAACTCTAGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: NHHWRFIFSVSMLSF*VSEPSRRGSRTLEL Trigger: GAGCTCTAGAGTTCTAGATCCTCTTCTGCTGGGCTCGGAGACTCAGAAGCTCAACATAGACACGGAGAAAATGAATCTCCAATGGTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR TCA 90 bp | TCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATaGCCACGGGTCATATCCTCTACATGTGGAGGGGCTTGGGACGTT | + |
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Preference number: 1 (lower is better) Translates to: SFRYLIKMEICLEPT*PRVISSTCGGAWDV Trigger: AACGTCCCAAGCCCCTCCACATGTAGAGGATATGACCCGTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR CCA 90 bp | AGCTTATTGGCTAAGCCCTCCAGTCCTTTAGGTACCTCATTAAAATaGAGATCTGTCTTGAGCCTACATGACCACGGGTCATATCCTCTA | + |
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Preference number: 1 (lower is better) Translates to: SLLAKPSSPLGTSLK*RSVLSLHDHGSYPL Trigger: TAGAGGATATGACCCGTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACTGGAGGGCTTAGCCAATAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTTGCCCAGAAACCTGGACACTaGGTGGGCTTCTCCAAATCC | + |
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Preference number: 2 (lower is better) Translates to: SQSSESKRGTANSWRTLAQKPGH*VGFSKS Trigger: GGATTTGGAGAAGCCCACCCAGTGTCCAGGTTTCTG...GGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCTGGGTGTGGTACATCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCACACAATGGGCAGAAACCTaGACACTGGGTGGGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LPWVWYIFSQSSESKRGTQWAET*TLGGLL Trigger: GAGAAGCCCACCCAGTGTCCAGGTTTCTGCCCATTG...TGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAGATGTACCACACCCAGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| 3UTR CAA 90 bp | AGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTaGCCATGTCTGTTTCTGCAATGGGCAGAAACCTGGACACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SPLSPREAQLTPGGH*PCLFLQWAETWTLG Trigger: ACCCAGTGTCCAGGTTTCTGCCCATTGCAGAAACAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTGTACCCCAGTACAGGTaGAGCACCTACTGTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: FLEGVSGKESLLAKPSSPVPQYR*STYCSF Trigger: GAAGGAACAGTAGGTGCTTCACCTGTACTGGGGTAC...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR CAA 90 bp | AAGCCCTCCAGTCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTaGAGCCTACATGACCACGGGTCATATCCTCTACATGTGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: KPSSPLGTSLKWRSV*SLHDHGSYPLHVEG Trigger: CCCCTCCACATGTAGAGGATATGACCCGTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACTGGAGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCAATGGAGATCTGTCTTaGGCCTACATGACCACGGGT | + |
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Preference number: 2 (lower is better) Translates to: FFWKECLGRKAYWLSPPVNGDLS*AYMTTG Trigger: ACCCGTGGTCATGTAGGCTCAAGACAGATCTCCATT...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGTACATCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTTGCCATGTCTGTTTCTaGAATGGGCAGAAACCTGGA | + |
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Preference number: 2 (lower is better) Translates to: CGTSFHSPLSPREAQLTPCHVCF*NGQKPG Trigger: TCCAGGTTTCTGCCCATTGCAGAAACAGACATGGCA...AGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAGATGTACCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATGACCACGTACCCCAGTACAGGTaGAGCACCTACTGTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SPLGTSLKWRSVLSLHDHVPQYR*STYCSF Trigger: GAAGGAACAGTAGGTGCTTCACCTGTACTGGGGTAC...GTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTTTAGGTTTGTCCTTATGTGACTaGTGGCTACAAATCTATGGG | + |
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Preference number: 2 (lower is better) Translates to: EGVSGKESLLAKPSSPLGLSLCD*WLQIYG Trigger: CCCATAGATTTGTAGCCATCAGTCACATAAGGACAA...ACCTAAAGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTGACGTTGTCCTTATGTaGCTGATGGCTACAAATCTA | + |
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Preference number: 2 (lower is better) Translates to: FLEGVSGKESLLAKPSSPDVVLM*LMATNL Trigger: TAGATTTGTAGCCATCAGTCACATAAGGACAACGTC...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTACACAAAACCACCATTaGAGATTCATTTTCTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: FLEGVSGKESLLAKPSSPTQNHH*RFIFSV Trigger: CACGGAGAAAATGAATCTCCAATGGTGGTTTTGTGT...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCACACAAAACCACCATTaGAGATTCATTTTCTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: FFWKECLGRKAYWLSPPVTQNHH*RFIFSV Trigger: CACGGAGAAAATGAATCTCCAATGGTGGTTTTGTGT...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCGGTACCTCATTAAAATaGAGATCTGTCTTGAGCCTA | + |
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Preference number: 2 (lower is better) Translates to: FFWKECLGRKAYWLSPPVGTSLK*RSVLSL Trigger: TAGGCTCAAGACAGATCTCCATTTTAATGAGGTACC...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATGACCACTTGTCCTTATGTGACTaGTGGCTACAAATCTATGGG | + |
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Preference number: 2 (lower is better) Translates to: SPLGTSLKWRSVLSLHDHLSLCD*WLQIYG Trigger: CCCATAGATTTGTAGCCATCAGTCACATAAGGACAA...GTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR CCA 72 bp | ACTCCTGGAGGACACTTGCCATGTCTGTTTCTGCAATaGGCAGAAACCTGGACACTGGGTGGGCTTCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: TPGGHLPCLFLQ*AETWTLGGLLQ Trigger: TTGGAGAAGCCCACCCAGTGTCCAGGTTTCTGCCCATTGCAGAAACAGACATGGCAAGTGTCCTCCAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| 3UTR CCA 72 bp | CAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTaGAGGACACTTGCCATGTCTGTTTCTGCAATGGGC | + |
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Preference number: 3 (lower is better) Translates to: QSSESKRGTANS*RTLAMSVSAMG Trigger: GCCCATTGCAGAAACAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| 3UTR TCA 72 bp | CATGTGGAGGGGCTTGGGACGTTGTCCTTATGTGACTaGTGGCTACAAATCTATGGGGGTCTGCAGCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: HVEGLGTLSLCD*WLQIYGGLQLV Trigger: CACTAGCTGCAGACCCCCATAGATTTGTAGCCATCAGTCACATAAGGACAACGTCCCAAGCCCCTCCACATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR CCA 72 bp | GCTAAGCCCTCCAGTCCTTTAGGTACCTCATTAAAATaGAGATCTGTCTTGAGCCTACATGACCACGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: AKPSSPLGTSLK*RSVLSLHDHGS Trigger: TGACCCGTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACTGGAGGGCTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR TCA 72 bp | TACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATaGCCACGGGTCATATCCTCTACATGTGGAGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: YLIKMEICLEPT*PRVISSTCGGA Trigger: AGCCCCTCCACATGTAGAGGATATGACCCGTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS-3UTR TCA 90 bp | TCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACAGCAGTGGGCAGCCGTaGGCACCCACACCTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SFHSPLSPREAQLTPGGHSSGQP*APTPRG Trigger: TCCACGAGGTGTGGGTGCTCACGGCTGCCCACTGCT...GTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR CCA 90 bp | CAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTTGCCATGACTGTGGATGGGGAGTaGATCCCAAGGCCCACCCCT | + |
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Preference number: 4 (lower is better) Translates to: QSSESKRGTANSWRTLAMTVDGE*IPRPTP Trigger: AGGGGTGGGCCTTGGGATCCACTCCCCATCCACAGT...CATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR TCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTAGCAGTGGGCAGCCGTaGGCACCCACACCTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPSSGQP*APTPRG Trigger: TCCACGAGGTGTGGGTGCTCACGGCTGCCCACTGCT...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGAGGACACTTGCCATGTCTGTTTCTGCAATGGGCAGAAACCTGGACACTGGGGTGAGAGGAGTCTaGGCTGCTGGGAGGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: SWRTLAMSVSAMGRNLDTGVRGV*AAGRQT Trigger: TGTCTGCCTCCCAGCAGCCCAGACTCCTCTCACCCC...AGTGTCCAGGTTTCTGCCCATTGCAGAAACAGACATGGCAAGTGTCCTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR CCA 90 bp | TCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACCACCTCTTTCCTGGGTaGCTCCCCAGCCTGTCACCC | + |
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Preference number: 4 (lower is better) Translates to: SFHSPLSPREAQLTPGGHHLFPG*LPSLSP Trigger: GGGTGACAGGCTGGGGAGCCACCCAGGAAAGAGGTG...GTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR CCA 90 bp | TCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTTGCCATGTCTGTTTGGGCACCTCTTTCCTaGGTGGCTCCCCAGCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SESKRGTANSWRTLAMSVWAPLS*VAPQPV Trigger: GACAGGCTGGGGAGCCACCCAGGAAAGAGGTGCCCA...AACAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR TCA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCAGCAGTGGGCAGCCGTaGGCACCCACACCTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FFWKECLGRKAYWLSPPVSSGQP*APTPRG Trigger: TCCACGAGGTGTGGGTGCTCACGGCTGCCCACTGCT...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS-3UTR TCA 90 bp | AAGAGAGGCACAGCTAACTCCTGGAGGACACTTGCCATGTCTGTTTCTGCAATGGGAGGCAGACAGGAGTaGACTGAGAGGGCCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: KRGTANSWRTLAMSVSAMGGRQE*TERAAE Trigger: CTCTGCGGCCCTCTCAGTTCACTCCTGTCTGCCTCC...CATTGCAGAAACAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR TCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTGGAGGCAGACAGGAGTaGACTGAGAGGGCCGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPGGRQE*TERAAE Trigger: CTCTGCGGCCCTCTCAGTTCACTCCTGTCTGCCTCC...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS-3UTR TCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTGATGATTCGCTCCCCTaGCAGGCTGCTCCCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPDDSLP*QAAPLG Trigger: ACCCAGGGGAGCAGCCTGTCAGGGGAGCGAATCATC...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS-3UTR CCA 90 bp | TCCCCTGGGTGTGGTACATCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCACAGAGGAGTCTGGGCTGCTaGGAGGCAGACAGGAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: SPGCGTSFHSPLSPREAQRSLGC*EADRSE Trigger: TTCACTCCTGTCTGCCTCCCAGCAGCCCAGACTCCT...CTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAGATGTACCACACCCAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR CCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTGGGGTGAGAGGAGTCTaGGCTGCTGGGAGGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPGVRGV*AAGRQT Trigger: TGTCTGCCTCCCAGCAGCCCAGACTCCTCTCACCCC...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS-3UTR GCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTGAGAGGAGTCTGGGCTaGTGGGAGGCAGACAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPERSLG*WEADRS Trigger: ACTCCTGTCTGCCTCCCAGCAGCCCAGACTCCTCTC...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCGGGGTGAGAGGAGTCTaGGCTGCTGGGAGGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: FFWKECLGRKAYWLSPPVGVRGV*AAGRQT Trigger: TGTCTGCCTCCCAGCAGCCCAGACTCCTCTCACCCC...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS-3UTR CCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTGCCATGTCTCTTTCCTaGGTGGCTCCCCAGCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPAMSLS*VAPQPV Trigger: GACAGGCTGGGGAGCCACCCAGGAAAGAGACATGGC...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGCTCCCCTGGGTGTGGTACATCTTTTCACAGTCCTCTGAGTCCAAGAGAACAATCCACTGTGGATaGGGAGTGGATCCCAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLLPWVWYIFSQSSESKRTIHCG*GVDPKA Trigger: GGCCTTGGGATCCACTCCCCATCCACAGTGGATTGT...TCTCTTGGACTCAGAGGACTGTGAAAAGATGTACCACACCCAGGGGAGCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR TCA 90 bp | CTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTTGCCATGTCTGTTTCGGTTATCCACAGGCTaGCTTGCCAAGGCCATTGTC | + |
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Preference number: 4 (lower is better) Translates to: LSPREAQLTPGGHLPCLFRLSTG*LAKAIV Trigger: GACAATGGCCTTGGCAAGTCAGCCTGTGGATAACCG...AAACAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR TCA 90 bp | TCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTTGCCATGTCTGTTAACTTTTTGGGGATGTaGCCACCGGTGGGTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SESKRGTANSWRTLAMSVNFLGM*PPVGCP Trigger: TGGGCAACCCACCGGTGGTCACATCCCCAAAAAGTT...AACAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR GCA 90 bp | TGCTCCCCTGGGTGTGGTACATCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCAATCCACAGGCTGACTTaGCAAGGCCATTGTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CSPGCGTSFHSPLSPREAIHRLT*QGHCPS Trigger: GGAAGGACAATGGCCTTGGCAAGTCAGCCTGTGGAT...TGCCTCTCTTGGACTCAGAGGACTGTGAAAAGATGTACCACACCCAGGGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
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| CDS-3UTR CCA 90 bp | GAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTTTAGGTAGGAGTCTGGGCTGCTaGGAGGCAGACAGGAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: EGVSGKESLLAKPSSPLGRSLGC*EADRSE Trigger: TTCACTCCTGTCTGCCTCCCAGCAGCCCAGACTCCT...ACCTAAAGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCTGTCTCTTTCCTGGGTaGCTCCCCAGCCTGTCACCC | + |
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Preference number: 4 (lower is better) Translates to: FFWKECLGRKAYWLSPPVCLFPG*LPSLSP Trigger: GGGTGACAGGCTGGGGAGCCACCCAGGAAAGAGACA...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| 3UTR CAA 72 bp | AGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTaGCCATGTCTGTTTCTGCAATGGGCAGAAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPREAQLTPGGH*PCLFLQWAETW Trigger: CCAGGTTTCTGCCCATTGCAGAAACAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTTGCCATGTCCTTCCAAAGCATCTTaGCCACCCACGATCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLSPREAQLTPGGHLPCPSKAS*PPTIFP Trigger: TGGAAAGATCGTGGGTGGTCAAGATGCTTTGGAAGG...ACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTCGGTTATCCACAGGCTaGCTTGCCAAGGCCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPRLSTG*LAKAIV Trigger: GACAATGGCCTTGGCAAGTCAGCCTGTGGATAACCG...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCAGGAGTCTGGGCTGCTaGGAGGCAGACAGGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FFWKECLGRKAYWLSPPVRSLGC*EADRSE Trigger: TTCACTCCTGTCTGCCTCCCAGCAGCCCAGACTCCT...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTTTAGGTGGAGTGGCCACATACTaGGGGCAATATATCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: EGVSGKESLLAKPSSPLGGVATY*GQYIST Trigger: CGTGGAGATATATTGCCCTCAGTATGTGGCCACTCC...ACCTAAAGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGGTACATCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCGGAGTGGCCACATACTaGGGGCAATATATCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VWYIFSQSSESKRGTANSGVATY*GQYIST Trigger: CGTGGAGATATATTGCCCTCAGTATGTGGCCACTCC...GGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAGATGTACCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTGGAGTGGCCACATACTaGGGGCAATATATCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPGVATY*GQYIST Trigger: CGTGGAGATATATTGCCCTCAGTATGTGGCCACTCC...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATGACCACGGAGGCAGACAGGAGTaGACTGAGAGGGCCGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTSLKWRSVLSLHDHGGRQE*TERAAE Trigger: CTCTGCGGCCCTCTCAGTTCACTCCTGTCTGCCTCC...GTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTTTAGGTCTTTTCACAGTCCTCTaGGTCCAAGAGAGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGVSGKESLLAKPSSPLGLFTVL*VQERHS Trigger: GCTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAG...ACCTAAAGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTATCCACAGGCTGACTTaGCAAGGCCATTGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPIHRLT*QGHCPS Trigger: GGAAGGACAATGGCCTTGGCAAGTCAGCCTGTGGAT...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTCTCCTGGAGGACACTTaGCATGTCTCTTTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPLLEDT*HVSFLG Trigger: ACCCAGGAAAGAGACATGGCAAGTGTCCTCCAGGAG...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATGACCACGCTCCCCTGACAGGCTaGTCCCCTGGGTGTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTSLKWRSVLSLHDHAPLTG*SPGCGT Trigger: TGTACCACACCCAGGGGAGCAGCCTGTCAGGGGAGC...GTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTATGCTGCAGAGGCACTaGAGTGGTACCCATAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPMLQRH*SGTHRH Trigger: ATGCCTATGGGTACCACTCCAGTGCCTCTGCAGCAT...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTAACGGCCAGCAACACTaGCAGCAGCATTTGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPNGQQH*QQHLVC Trigger: GCATACCAAATGCTGCTGCCAGTGTTGCTGGCCGTT...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTGCTCCCCTGGGTGTGGTACATCTTTTCACAGTCCTCTGAGTCCAAGAGAGCCATTGCAGTTGTaGCTGAGAGTAACTTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TGCSPGCGTSFHSPLSPREPLQL*LRVTFW Trigger: CCAAAAAGTTACTCTCAGTCACAACTGCAATGGCTC...TCTTGGACTCAGAGGACTGTGAAAAGATGTACCACACCCAGGGGAGCAGCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTGCAAAAGAAGAAAGATaGACCTTGCCCGGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLEGVSGKESLLAKPSSPAKEER*TLPGTP Trigger: TGGAGTCCCGGGCAAGGTGCATCTTTCTTCTTTTGC...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCGGCACAGCTAACTCCTaGAGGACACTTGCCATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFWKECLGRKAYWLSPPVGTANS*RTLAMS Trigger: AGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCC...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CCA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCAACGGCCAGCAACACTaGCAGCAGCATTTGGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FFWKECLGRKAYWLSPPVNGQQH*QQHLVC Trigger: GCATACCAAATGCTGCTGCCAGTGTTGCTGGCCGTT...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCCTTCCAAAGCATCTTaGCCACCCACGATCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFWKECLGRKAYWLSPPVPSKAS*PPTIFP Trigger: TGGAAAGATCGTGGGTGGTCAAGATGCTTTGGAAGG...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTTGCCATGTCTGTTGTTATAGAAGAAGCCTaGATAAGACCTGCGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SESKRGTANSWRTLAMSVVIEEA*IRPAQG Trigger: ACCTTGCGCAGGTCTTATGCAGGCTTCTTCTATAAC...AACAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTTTAGGTGCCACTAAAGTTGAGTaGGGTTCCAGAAGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EGVSGKESLLAKPSSPLGATKVE*GSRRES Trigger: ACTTTCCCTTCTGGAACCCCACTCAACTTTAGTGGC...ACCTAAAGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGGCACAGCTAACTCCTGGAGGACACTTGCCATGTCTGTTTCTGCAATGGCCACTAAAGTTGAGTaGGGTTCCAGAAGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRGTANSWRTLAMSVSAMATKVE*GSRRES Trigger: ACTTTCCCTTCTGGAACCCCACTCAACTTTAGTGGC...CATTGCAGAAACAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATGACCACCGGTTATCCACAGGCTaGCTTGCCAAGGCCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTSLKWRSVLSLHDHRLSTG*LAKAIV Trigger: GACAATGGCCTTGGCAAGTCAGCCTGTGGATAACCG...GTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATGACCACCTTTTCACAGTCCTCTaGGTCCAAGAGAGGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTSLKWRSVLSLHDHLFTVL*VQERHS Trigger: GCTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAG...GTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATGACCACATCCACAGGCTGACTTaGCAAGGCCATTGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTSLKWRSVLSLHDHIHRLT*QGHCPS Trigger: GGAAGGACAATGGCCTTGGCAAGTCAGCCTGTGGAT...GTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATGACCACATGCTGCAGAGGCACTaGAGTGGTACCCATAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLGTSLKWRSVLSLHDHMLQRH*SGTHRH Trigger: ATGCCTATGGGTACCACTCCAGTGCCTCTGCAGCAT...GTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS CCA 90 bp | AGAGGCACAGCTAACTCCTGGAGGACACTTGCCATGTCTCTTTCCTaGGTGGCTCCCCAGCCTGTCACCCAGCAGACAGTCCCAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGTANSWRTLAMSLS*VAPQPVTQQTVPGV Trigger: CACCCCTGGGACTGTCTGCTGGGTGACAGGCTGGGGAGCCACCCAGGAAAGAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000234765.2 |
||
| CDS CCA 90 bp | GCCTGCATAAGACCTGCGCAAGGTCAGGCCGTCAACAATCCACTGTaGATGGGGAGTGGATCCCAAGGCCCACCCCTCACTGAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ACIRPAQGQAVNNPL*MGSGSQGPPLTEEP Trigger: TGGCTCCTCAGTGAGGGGTGGGCCTTGGGATCCACTCCCCATCCACAGTGGATTGTTGACGGCCTGACCTTGCGCAGGTCTTATGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135549.8 ENSMUST00000151448.8 |
||
| CDS TCA 90 bp | CCTTCTGGCCTTCTACGTAGCCTGCACAGAGCATGTCCGACTGGATaGTTCGCTCCCCTGACAGGCTGCTCCCCTGGGTGTGGTACATCT | + |
|
Preference number: 5 (lower is better) Translates to: PSGLLRSLHRACPTG*FAPLTGCSPGCGTS Trigger: AGATGTACCACACCCAGGGGAGCAGCCTGTCAGGGGAGCGAATCATCCAGTCGGACATGCTCTGTGCAGGCTACGTAGAAGGCCAGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000234765.2 |
||
| CDS GCA 90 bp | AGGAGTATCCAGCTGCACCAGGGCAATGTCTCCGCTAGACGCATCTaGCCAGAGGTAGGTGGGATGCACGAAGATGTTCCTCACGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSIQLHQGNVSARRI*PEVGGMHEDVPHGH Trigger: GTGGCCGTGAGGAACATCTTCGTGCATCCCACCTACCTCTGGGCAGATGCGTCTAGCGGAGACATTGCCCTGGTGCAGCTGGATACTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000147626.2 ENSMUST00000151448.8 ENSMUST00000234765.2 |
||
| CDS CCA 90 bp | CTGTATGGCCGAGCGCAGCCAATACCCCAGCTGGTGATCCCGACCTaGGTCCAAGAACTGTTGATGGAACAAACGAGCGGTCCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYGRAQPIPQLVIPT*VQELLMEQTSGPPE Trigger: CTCTGGAGGACCGCTCGTTTGTTCCATCAACAGTTCTTGGACCCAGGTCGGGATCACCAGCTGGGGTATTGGCTGCGCTCGGCCATACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS TCA 90 bp | TGCCCAGAGGTAGGTGGGATGCACGAAGATGTTCCTCACGGCCACTaGGGGCAATATATCTCCACGTGCCCTTGTCAGGATCTGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CPEVGGMHEDVPHGH*GQYISTCPCQDLQQ Trigger: TTGCTGCAGATCCTGACAAGGGCACGTGGAGATATATTGCCCTCAGTGGCCGTGAGGAACATCTTCGTGCATCCCACCTACCTCTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147626.2 |
||
| CDS CCA 90 bp | ATCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTaGAGGACACTTGCCATGTCTCTTTCCTGGGTGGCTCCCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IFSQSSESKRGTANS*RTLAMSLSWVAPQP Trigger: AGGCTGGGGAGCCACCCAGGAAAGAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000234765.2 |
||
| CDS TCA 90 bp | TTGACCACCCACGATCTTTCCAGCATCTCGGGAGTGGCCACATACTaGGGGCAATATATCTCCACGTGCCCTTGTCAGGATCTGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LTTHDLSSISGVATY*GQYISTCPCQDLQQ Trigger: TTGCTGCAGATCCTGACAAGGGCACGTGGAGATATATTGCCCTCAGTATGTGGCCACTCCCGAGATGCTGGAAAGATCGTGGGTGGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS TCA 90 bp | TTGACCACCCACGATCTTTCCAGCATCTCGGGAGTGGCCACATACTaGGGGCAATATATCTCCACGTGCCCAGCCGTTATAGAAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTTHDLSSISGVATY*GQYISTCPAVIEEA Trigger: GGCTTCTTCTATAACGGCTGGGCACGTGGAGATATATTGCCCTCAGTATGTGGCCACTCCCGAGATGCTGGAAAGATCGTGGGTGGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135549.8 ENSMUST00000151448.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTTATCTCCACGTGCCCTaGTCAGGATCTGCAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLEGVSGKESLLAKPSSPYLHVP*SGSAAK Trigger: TTTTGCTGCAGATCCTGACAAGGGCACGTGGAGATA...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACATCCTTCCAAAGCATCTaGACCACCCACGATCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IFSQSSESKRGTANSWRTSFQSI*TTHDLS Trigger: GGAAAGATCGTGGGTGGTCAAGATGCTTTGGAAGGA...TGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTTTAGGTTCCTTCCAAAGCATCTaGACCACCCACGATCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGVSGKESLLAKPSSPLGSFQSI*TTHDLS Trigger: GGAAAGATCGTGGGTGGTCAAGATGCTTTGGAAGGA...ACCTAAAGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGGTACATCTTTTCACAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCGACTTGCCAAGGCCATaGTCCTTCCAAAGCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VWYIFSQSSESKRGTANSDLPRP*SFQSIL Trigger: CAAGATGCTTTGGAAGGACAATGGCCTTGGCAAGTC...GGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTGTGAAAAGATGTACCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151448.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCCTGACTTGCCAAGGCCATaGTCCTTCCAAAGCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLEGVSGKESLLAKPSSPDLPRP*SFQSIL Trigger: CAAGATGCTTTGGAAGGACAATGGCCTTGGCAAGTC...AGGACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCTATCTCCACGTGCCCTaGTCAGGATCTGCAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FFWKECLGRKAYWLSPPVYLHVP*SGSAAK Trigger: TTTTGCTGCAGATCCTGACAAGGGCACGTGGAGATA...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCTGGAAGGAGTGTCTGGGAAGGAAAGCTTATTGGCTAAGCCCTCCAGTCGACTTGCCAAGGCCATaGTCCTTCCAAAGCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FFWKECLGRKAYWLSPPVDLPRP*SFQSIL Trigger: CAAGATGCTTTGGAAGGACAATGGCCTTGGCAAGTC...GACTGGAGGGCTTAGCCAATAAGCTTTCCTTCCCAGACACTCCTTCCAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCTTTAGGTACCTCATTAAAATGGAGATCTGTCTTGAGCCTACATGACCACTCCTTCCAAAGCATCTaGACCACCCACGATCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPLGTSLKWRSVLSLHDHSFQSI*TTHDLS Trigger: GGAAAGATCGTGGGTGGTCAAGATGCTTTGGAAGGA...GTGGTCATGTAGGCTCAAGACAGATCTCCATTTTAATGAGGTACCTAAAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
||
| CDS CCA 72 bp | GCAGACAGTCCCAGGGGTGAGAGGAGTCTGGGCTGCTaGGAGGCAGACAGGAGTGAACTGAGAGGGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: ADSPRGERSLGC*EADRSELRGPQ Trigger: CTGCGGCCCTCTCAGTTCACTCCTGTCTGCCTCCCAGCAGCCCAGACTCCTCTCACCCCTGGGACTGTCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000151448.8 ENSMUST00000234765.2 |
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| CDS CCA 72 bp | CTGCGCAAGGTCAGGCCGTCAACAATCCACTGTGGATaGGGAGTGGATCCCAAGGCCCACCCCTCACTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LRKVRPSTIHCG*GVDPKAHPSLR Trigger: CCTCAGTGAGGGGTGGGCCTTGGGATCCACTCCCCATCCACAGTGGATTGTTGACGGCCTGACCTTGCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135549.8 ENSMUST00000151448.8 |
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| CDS CCA 72 bp | AGACCTGCGCAAGGTCAGGCCGTCAACAATCCACTGTaGATGGGGAGTGGATCCCAAGGCCCACCCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: RPAQGQAVNNPL*MGSGSQGPPLT Trigger: AGTGAGGGGTGGGCCTTGGGATCCACTCCCCATCCACAGTGGATTGTTGACGGCCTGACCTTGCGCAGGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135549.8 ENSMUST00000151448.8 |
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| CDS TCA 72 bp | CTTCTACGTAGCCTGCACAGAGCATGTCCGACTGGATaGTTCGCTCCCCTGACAGGCTGCTCCCCTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: LLRSLHRACPTG*FAPLTGCSPGC Trigger: ACACCCAGGGGAGCAGCCTGTCAGGGGAGCGAATCATCCAGTCGGACATGCTCTGTGCAGGCTACGTAGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000234765.2 |
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| CDS CAA 90 bp | AGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTaGCCATGTCTCTTTCCTGGGTGGCTCCCCAGCCTGTCACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPLSPREAQLTPGGH*PCLFPGWLPSLSPS Trigger: GCTGGGTGACAGGCTGGGGAGCCACCCAGGAAAGAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000234765.2 |
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| CDS CCA 72 bp | CGAGCGCAGCCAATACCCCAGCTGGTGATCCCGACCTaGGTCCAAGAACTGTTGATGGAACAAACGAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: RAQPIPQLVIPT*VQELLMEQTSG Trigger: ACCGCTCGTTTGTTCCATCAACAGTTCTTGGACCCAGGTCGGGATCACCAGCTGGGGTATTGGCTGCGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS CAA 72 bp | AGTCCAAGAGAGGCACAGCTAACTCCTGGAGGACACTaGCCATGTCTCTTTCCTGGGTGGCTCCCCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SPREAQLTPGGH*PCLFPGWLPSL Trigger: CAGGCTGGGGAGCCACCCAGGAAAGAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000234765.2 |
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| CDS CAA 90 bp | GGAGCCCCCGCATATGTGGCCATCCTCGGTTATCCACAGGCTGACTaGCCAAGGCCATTGTCCTTCCAAAGCATCTTGACCACCCACGAT | + |
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Preference number: 6 (lower is better) Translates to: GAPAYVAILGYPQAD*PRPLSFQSILTTHD Trigger: ATCGTGGGTGGTCAAGATGCTTTGGAAGGACAATGGCCTTGGCAAGTCAGCCTGTGGATAACCGAGGATGGCCACATATGCGGGGGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000151448.8 ENSMUST00000234765.2 |
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| CDS TCA 72 bp | GTGGATGGGGAGTGGATCCCAAGGCCCACCCCTCACTaGGGAGCCATTGCAGTTGTGACTGAGAGTAACTTT | + |
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Preference number: 6 (lower is better) Translates to: VDGEWIPRPTPH*GAIAVVTESNF Trigger: AAAGTTACTCTCAGTCACAACTGCAATGGCTCCTCAGTGAGGGGTGGGCCTTGGGATCCACTCCCCATCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135549.8 ENSMUST00000151448.8 |
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| CDS CCA 72 bp | CAGTCCTCTGAGTCCAAGAGAGGCACAGCTAACTCCTaGAGGACACTTGCCATGTCTCTTTCCTGGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: QSSESKRGTANS*RTLAMSLSWVA Trigger: AGCCACCCAGGAAAGAGACATGGCAAGTGTCCTCCAGGAGTTAGCTGTGCCTCTCTTGGACTCAGAGGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000234765.2 |
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| CDS TCA 72 bp | GTAGGTGGGATGCACGAAGATGTTCCTCACGGCCACTaGGGGCAATATATCTCCACGTGCCCTTGTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: VGGMHEDVPHGH*GQYISTCPCQD Trigger: ATCCTGACAAGGGCACGTGGAGATATATTGCCCTCAGTGGCCGTGAGGAACATCTTCGTGCATCCCACCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147626.2 |
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| CDS CAA 72 bp | GCTGACTTGCCAAGGCCATTGTCCTTCCAAAGCATCTaGACCACCCACGATCTTTCCAGCATCTCGGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: ADLPRPLSFQSI*TTHDLSSISGV Trigger: CACTCCCGAGATGCTGGAAAGATCGTGGGTGGTCAAGATGCTTTGGAAGGACAATGGCCTTGGCAAGTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000151448.8 ENSMUST00000234765.2 |
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| CDS CAA 72 bp | TGGGATGCACGAAGATGTTCCTCACGGCCACTAAAGTaGAGTGGGGTTCCAGAAGGGAAAGTGTCAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: WDARRCSSRPLK*SGVPEGKVSAL Trigger: GAGGGCTGACACTTTCCCTTCTGGAACCCCACTCAACTTTAGTGGCCGTGAGGAACATCTTCGTGCATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000151448.8 ENSMUST00000234765.2 |
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| CDS CAA 72 bp | CCCATAGGCATCAGAGTGGTTCTCTGCCAGGATCCTTaGAATCCAGTCCACATAGGTGGGCACCCGAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: PIGIRVVLCQDP*NPVHIGGHPSV Trigger: TACACTCGGGTGCCCACCTATGTGGACTGGATTCAAAGGATCCTGGCAGAGAACCACTCTGATGCCTATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS CAA 90 bp | TATCCACAGGCTGACTTGCCAAGGCCATTGTCCTTCCAAAGCATCTaGACCACCCACGATCTTTCCAGCATCTCGGGAGTGGCCACATAC | + |
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Preference number: 6 (lower is better) Translates to: YPQADLPRPLSFQSI*TTHDLSSISGVATY Trigger: GTATGTGGCCACTCCCGAGATGCTGGAAAGATCGTGGGTGGTCAAGATGCTTTGGAAGGACAATGGCCTTGGCAAGTCAGCCTGTGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000151448.8 ENSMUST00000234765.2 |
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| CDS TCA 72 bp | CACGATCTTTCCAGCATCTCGGGAGTGGCCACATACTaGGGGCAATATATCTCCACGTGCCCTTGTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: HDLSSISGVATY*GQYISTCPCQD Trigger: ATCCTGACAAGGGCACGTGGAGATATATTGCCCTCAGTATGTGGCCACTCCCGAGATGCTGGAAAGATCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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| CDS TCA 72 bp | CACGATCTTTCCAGCATCTCGGGAGTGGCCACATACTaGGGGCAATATATCTCCACGTGCCCAGCCGTTATA | + |
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Preference number: 6 (lower is better) Translates to: HDLSSISGVATY*GQYISTCPAVI Trigger: TATAACGGCTGGGCACGTGGAGATATATTGCCCTCAGTATGTGGCCACTCCCGAGATGCTGGAAAGATCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135549.8 ENSMUST00000151448.8 |
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| CDS CAA 72 bp | GCATATGTGGCCATCCTCGGTTATCCACAGGCTGACTaGCCAAGGCCATTGTCCTTCCAAAGCATCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: AYVAILGYPQAD*PRPLSFQSILT Trigger: GGTCAAGATGCTTTGGAAGGACAATGGCCTTGGCAAGTCAGCCTGTGGATAACCGAGGATGGCCACATATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000151448.8 ENSMUST00000234765.2 |
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| CDS CAA 90 bp | TATGTGGCCATCCTCGGTTATCCACAGGCTGACTTGCCAAGGCCATaGTCCTTCCAAAGCATCTTGACCACCCACGATCTTTCCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: YVAILGYPQADLPRP*SFQSILTTHDLSSI Trigger: GATGCTGGAAAGATCGTGGGTGGTCAAGATGCTTTGGAAGGACAATGGCCTTGGCAAGTCAGCCTGTGGATAACCGAGGATGGCCACATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024936.11 ENSMUST00000135549.8 ENSMUST00000151448.8 ENSMUST00000234765.2 |
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| CDS CAA 72 bp | TCACGGCCACTGAGGGCAATATATCTCCACGTGCCCTaGTCAGGATCTGCAGCAAAAGAAGAAAGATGCACC | + |
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Preference number: 6 (lower is better) Translates to: SRPLRAIYLHVP*SGSAAKEERCT Trigger: GGTGCATCTTTCTTCTTTTGCTGCAGATCCTGACAAGGGCACGTGGAGATATATTGCCCTCAGTGGCCGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147626.2 |
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| CDS CAA 72 bp | GGCCACATACTGAGGGCAATATATCTCCACGTGCCCTaGTCAGGATCTGCAGCAAAAGAAGAAAGATGCACC | + |
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Preference number: 6 (lower is better) Translates to: GHILRAIYLHVP*SGSAAKEERCT Trigger: GGTGCATCTTTCTTCTTTTGCTGCAGATCCTGACAAGGGCACGTGGAGATATATTGCCCTCAGTATGTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024936.11 ENSMUST00000234765.2 |
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