Pregenerated sensors for PRSS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071519Ensembl transcript IDs: ENSMUST00000096003.7
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CAA 90 bp | GCAGGTGCACAGGAGCTGGGCAGAGCCACAGTGGCCACTCTGGCATaGAGGGTCACAGGGGAAGAGAGCTTGAGCAACATAATGTCGTTG | + |
Preference number: 6 (lower is better) Translates to: AGAQELGRATVATLA*RVTGEESLSNIMSL Trigger: CAACGACATTATGTTGCTCAAGCTCTCTTCCCCTGTGACCCTCAATGCCAGAGTGGCCACTGTGGCTCTGCCCAGCTCCTGTGCACCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096003.7 |
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CDS CAA 72 bp | CAGGAGCTGGGCAGAGCCACAGTGGCCACTCTGGCATaGAGGGTCACAGGGGAAGAGAGCTTGAGCAACATA | + |
Preference number: 6 (lower is better) Translates to: QELGRATVATLA*RVTGEESLSNI Trigger: TATGTTGCTCAAGCTCTCTTCCCCTGTGACCCTCAATGCCAGAGTGGCCACTGTGGCTCTGCCCAGCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096003.7 |
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CDS CAA 90 bp | GCCACAGTGGCCACTCTGGCATTGAGGGTCACAGGGGAAGAGAGCTaGAGCAACATAATGTCGTTGTTCAGTGTCTTCCTATTGAAGTTG | + |
Preference number: 6 (lower is better) Translates to: ATVATLALRVTGEES*SNIMSLFSVFLLKL Trigger: CAACTTCAATAGGAAGACACTGAACAACGACATTATGTTGCTCAAGCTCTCTTCCCCTGTGACCCTCAATGCCAGAGTGGCCACTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096003.7 |
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CDS CAA 72 bp | GCCACTCTGGCATTGAGGGTCACAGGGGAAGAGAGCTaGAGCAACATAATGTCGTTGTTCAGTGTCTTCCTA | + |
Preference number: 6 (lower is better) Translates to: ATLALRVTGEES*SNIMSLFSVFL Trigger: TAGGAAGACACTGAACAACGACATTATGTTGCTCAAGCTCTCTTCCCCTGTGACCCTCAATGCCAGAGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096003.7 |