Pregenerated sensors for PRSS29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034039Ensembl transcript IDs: ENSMUST00000024993.9, ENSMUST00000234609.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGTGCCCTGGTCACCTAGCCCTCAGGCCCAGGTaGTGGGGTTCCAGCAATGGA | + |
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Preference number: 4 (lower is better) Translates to: QETEPCPSVANARCPGHLALRPR*WGSSNG Trigger: TCCATTGCTGGAACCCCAGCACCTGGGCCTGAGGGC...TAGGTGACCAGGGCACCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR GCA 90 bp | CAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGTGCCCTGGTCACCTACCTGTGTGTGCTCACTaGACCCCAGCCGGTCACCCA | + |
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Preference number: 4 (lower is better) Translates to: QETEPCPSVANARCPGHLPVCAH*TPAGHP Trigger: TGGGTGACCGGCTGGGGTGCAGTGAGCACACACAGG...TAGGTGACCAGGGCACCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR CCA 90 bp | CAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGTGCCCTGGTCACCTACTCAGGCCCAGGTGCTaGGGTTCCAGCAATGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QETEPCPSVANARCPGHLLRPRC*GSSNGA Trigger: TGCTCCATTGCTGGAACCCCAGCACCTGGGCCTGAG...TAGGTGACCAGGGCACCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR TCA 90 bp | CAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGTGCCCTGGTCACCTAGACCAGAGGGCCACCTaGGTCACCATAGCAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: QETEPCPSVANARCPGHLDQRAT*VTIAGI Trigger: GATTCCTGCTATGGTGACTCAGGTGGCCCTCTGGTC...TAGGTGACCAGGGCACCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR TCA 90 bp | CAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGTGCCCTGGTCACCTATATAGATCCTCAGGCTaGCCTGCCATGGCCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: QETEPCPSVANARCPGHLYRSSG*PAMATS Trigger: GGAAGTGGCCATGGCAGGTCAGCCTGAGGATCTATA...TAGGTGACCAGGGCACCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGGCCCTCAGGCCCAGGTaGTGGGGTTCCAGCAATGGA | + |
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Preference number: 4 (lower is better) Translates to: LYLGSQETEPCPSVANARALRPR*WGSSNG Trigger: TCCATTGCTGGAACCCCAGCACCTGGGCCTGAGGGC...CCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGCACTCAGCAGCTCCTTaGCCCCATAGAGGTACGCCT | + |
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Preference number: 4 (lower is better) Translates to: LYLGSQETEPCPSVANARHSAAP*PHRGTP Trigger: AGGCGTACCTCTATGGGGGCAAGGAGCTGCTGAGTG...CCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGAGGAGCCTGTCACATTaGAGACCAGAGGGCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: LYLGSQETEPCPSVANARRSLSH*RPEGHL Trigger: CAGGTGGCCCTCTGGTCTGCAATGTGACAGGCTCCT...CCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR GCA 90 bp | TATCTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCCTGTGTGTGCTCACTaGACCCCAGCCGGTCACCCA | + |
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Preference number: 4 (lower is better) Translates to: YLYLGSQETEPCPSVANAPVCAH*TPAGHP Trigger: TGGGTGACCGGCTGGGGTGCAGTGAGCACACACAGG...AGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGCGGCATCTTCACGAATaGAGTGGGCAGCAGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYLGSQETEPCPSVANARRHLHE*SGQQSA Trigger: TGCTGACTGCTGCCCACTGCATTCGTGAAGATGCCG...CCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234609.2 |
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| CDS-3UTR GCA 90 bp | CTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGCATCTCTCTCACGAATaGAGTGGGCAGCAGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LYLGSQETEPCPSVANARHLSHE*SGQQSA Trigger: TGCTGACTGCTGCCCACTGCATTCGTGAGAGAGATG...CCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024993.9 |
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| CDS-3UTR CCA 90 bp | TATCTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCTCAGGCCCAGGTGCTaGGGTTCCAGCAATGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: YLYLGSQETEPCPSVANALRPRC*GSSNGA Trigger: TGCTCCATTGCTGGAACCCCAGCACCTGGGCCTGAG...AGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGTGGACAAAGTCTGGGTaGATGATGACCCGGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: LYLGSQETEPCPSVANARWTKSG*MMTRLT Trigger: TGTGAGCCGGGTCATCATCCACCCAGACTTTGTCCA...CCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR CCA 90 bp | CTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGACAGACACTGCCAGCTaGAGCAGAGCCACATCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LYLGSQETEPCPSVANARTDTAS*SRATSE Trigger: TTCAGATGTGGCTCTGCTCCAGCTGGCAGTGTCTGT...CCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR TCA 90 bp | TATCTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTGACCAGAGGGCCACCTaGGTCACCATAGCAGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: YLYLGSQETEPCPSVANADQRAT*VTIAGI Trigger: GATTCCTGCTATGGTGACTCAGGTGGCCCTCTGGTC...AGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR CCA 90 bp | TATCTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCTCTCACGAATGCAGTaGGCAGCAGTCAGCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: YLYLGSQETEPCPSVANALSRMQ*AAVSTH Trigger: GTGGGTGCTGACTGCTGCCCACTGCATTCGTGAGAG...AGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024993.9 |
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| CDS-3UTR TCA 90 bp | TATCTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTTATAGATCCTCAGGCTaGCCTGCCATGGCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YLYLGSQETEPCPSVANAYRSSG*PAMATS Trigger: GGAAGTGGCCATGGCAGGTCAGCCTGAGGATCTATA...AGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR GCA 90 bp | TATCTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTGGATTGTACAGACACTaGCAGCTGGAGCAGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: YLYLGSQETEPCPSVANAGLYRH*QLEQSH Trigger: GTGGCTCTGCTCCAGCTGGCAGTGTCTGTACAATCC...AGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR GCA 90 bp | TATCTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTAACCTCTGCATCTGCTaGGTGATCCAGGGCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: YLYLGSQETEPCPSVANANLCIC*VIQGRK Trigger: CTTCCTGCCCTGGATCACGCAGCAGATGCAGAGGTT...AGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR CCA 90 bp | TATCTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTAGCGTGGACAAAGTCTaGGTGGATGATGACCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: YLYLGSQETEPCPSVANASVDKV*VDDDPA Trigger: AGCCGGGTCATCATCCACCCAGACTTTGTCCACGCT...AGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR CCA 90 bp | TATCTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTTGGACAAAGTCTGGGTaGATGATGACCCGGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: YLYLGSQETEPCPSVANAWTKSG*MMTRLT Trigger: TGTGAGCCGGGTCATCATCCACCCAGACTTTGTCCA...AGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS GCA 90 bp | CCTGCACCTGCTGTAGGCGGTAGGGAGGAGGCAGCGACCTGTGTGTaGTCACTGCACCCCAGCCGGTCACCCAGCACACATCCTTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: PAPAVGGREEAATCV*SLHPSRSPSTHPSW Trigger: CCAAGAAGGATGTGTGCTGGGTGACCGGCTGGGGTGCAGTGAGCACACACAGGTCGCTGCCTCCTCCCTACCGCCTACAGCAGGTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS TCA 90 bp | CTTGCCCCCATAGAGGTACGCCTCCCCAACACGGATCCGAAAGACTaGTGGGTCGGCATCTCTCTCACGAATGCAGTGGGCAGCAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: LAPIEVRLPNTDPKD*WVGISLTNAVGSSQ Trigger: CTGACTGCTGCCCACTGCATTCGTGAGAGAGATGCCGACCCATCAGTCTTTCGGATCCGTGTTGGGGAGGCGTACCTCTATGGGGGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024993.9 |
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| CDS TCA 90 bp | CTTGCCCCCATAGAGGTACGCCTCCCCAACACGGATCCGAAAGACTaGTGGGTCGGCATCTTCACGAATGCAGTGGGCAGCAGTCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: LAPIEVRLPNTDPKD*WVGIFTNAVGSSQH Trigger: GTGCTGACTGCTGCCCACTGCATTCGTGAAGATGCCGACCCATCAGTCTTTCGGATCCGTGTTGGGGAGGCGTACCTCTATGGGGGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234609.2 |
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| CDS GCA 90 bp | CCAGAGGGCCACCTGAGTCACCATAGCAGGAATCTTGGCCCTGGTTaGCTGCACATAACATGTCCTTTAGGATCAGTTTCTGGCCACGAT | + |
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Preference number: 5 (lower is better) Translates to: PEGHLSHHSRNLGPG*LHITCPLGSVSGHD Trigger: ATCGTGGCCAGAAACTGATCCTAAAGGACATGTTATGTGCAGGCAACCAGGGCCAAGATTCCTGCTATGGTGACTCAGGTGGCCCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGATGGAGCCCCCACAGTaGTGCACCCAGAAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LYLGSQETEPCPSVANARMEPPQ*CTQKAQ Trigger: CTGGGCCTTCTGGGTGCACAACTGTGGGGGCTCCAT...CCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CCA 90 bp | TTGACTGGCTTGACATTAGGAAAGGATTGTACAGACACTGCCAGCTaGAGCAGAGCCACATCTGAACCCAGGCCAGCGTGGACAAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: LTGLTLGKDCTDTAS*SRATSEPRPAWTKS Trigger: AGACTTTGTCCACGCTGGCCTGGGTTCAGATGTGGCTCTGCTCCAGCTGGCAGTGTCTGTACAATCCTTTCCTAATGTCAAGCCAGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CCA 90 bp | TTTAGGATCAGTTTCTGGCCACGATTGCGGTGCCTGGTGGCATTGTaGTACATCTCCTCACAAAGTGAGTTGTCAATTATCTTTACCTGC | + |
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Preference number: 5 (lower is better) Translates to: FRISFWPRLRCLVAL*YISSQSELSIIFTC Trigger: GCAGGTAAAGATAATTGACAACTCACTTTGTGAGGAGATGTACCACAATGCCACCAGGCACCGCAATCGTGGCCAGAAACTGATCCTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CCA 90 bp | ACATGTCCTTTAGGATCAGTTTCTGGCCACGATTGCGGTGCCTGGTaGCATTGTGGTACATCTCCTCACAAAGTGAGTTGTCAATTATCT | + |
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Preference number: 5 (lower is better) Translates to: TCPLGSVSGHDCGAW*HCGTSPHKVSCQLS Trigger: AGATAATTGACAACTCACTTTGTGAGGAGATGTACCACAATGCCACCAGGCACCGCAATCGTGGCCAGAAACTGATCCTAAAGGACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR CAA 90 bp | CTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTCGGGGCAGCTTGACTGGCTaGACATTAGGAAAGGATTGT | + |
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Preference number: 5 (lower is better) Translates to: LYLGSQETEPCPSVANARGSLTG*TLGKDC Trigger: ACAATCCTTTCCTAATGTCAAGCCAGTCAAGCTGCC...CCGAGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS-3UTR CAA 90 bp | TATCTTTATTTAGGAAGCCAGGAAACTGAGCCATGTCCTTCAGTAGCTAATGCTGGCAGCTTGACTGGCTaGACATTAGGAAAGGATTGT | + |
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Preference number: 5 (lower is better) Translates to: YLYLGSQETEPCPSVANAGSLTG*TLGKDC Trigger: ACAATCCTTTCCTAATGTCAAGCCAGTCAAGCTGCC...AGCATTAGCTACTGAAGGACATGGCTCAGTTTCCTGGCTTCCTAAATAAAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS GCA 72 bp | GCTGTAGGCGGTAGGGAGGAGGCAGCGACCTGTGTGTaGTCACTGCACCCCAGCCGGTCACCCAGCACACAT | + |
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Preference number: 6 (lower is better) Translates to: AVGGREEAATCV*SLHPSRSPSTH Trigger: ATGTGTGCTGGGTGACCGGCTGGGGTGCAGTGAGCACACACAGGTCGCTGCCTCCTCCCTACCGCCTACAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CCA 72 bp | CACGATGCCCATCAGAACGCCCTCAGGCCCAGGTGCTaGGGTTCCAGCAATGGAGCACCCAAGAAAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HDAHQNALRPRC*GSSNGAPKKEE Trigger: CTCTTCTTTCTTGGGTGCTCCATTGCTGGAACCCCAGCACCTGGGCCTGAGGGCGTTCTGATGGGCATCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CAA 90 bp | TGTGTGCTCACTGCACCCCAGCCGGTCACCCAGCACACATCCTTCTaGGTGACCTCAAGAGACTCAGAGGGCAGCTTGACTGGCTTGACA | + |
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Preference number: 6 (lower is better) Translates to: CVLTAPQPVTQHTSF*VTSRDSEGSLTGLT Trigger: TGTCAAGCCAGTCAAGCTGCCCTCTGAGTCTCTTGAGGTCACCAAGAAGGATGTGTGCTGGGTGACCGGCTGGGGTGCAGTGAGCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CAA 90 bp | TCCTTCTTGGTGACCTCAAGAGACTCAGAGGGCAGCTTGACTGGCTaGACATTAGGAAAGGATTGTACAGACACTGCCAGCTGGAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SFLVTSRDSEGSLTG*TLGKDCTDTASWSR Trigger: TCTGCTCCAGCTGGCAGTGTCTGTACAATCCTTTCCTAATGTCAAGCCAGTCAAGCTGCCCTCTGAGTCTCTTGAGGTCACCAAGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CCA 72 bp | TTGCCTGCACATAACATGTCCTTTAGGATCAGTTTCTaGCCACGATTGCGGTGCCTGGTGGCATTGTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: LPAHNMSFRISF*PRLRCLVALWY Trigger: GTACCACAATGCCACCAGGCACCGCAATCGTGGCCAGAAACTGATCCTAAAGGACATGTTATGTGCAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CAA 72 bp | GTGACCTCAAGAGACTCAGAGGGCAGCTTGACTGGCTaGACATTAGGAAAGGATTGTACAGACACTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VTSRDSEGSLTG*TLGKDCTDTAS Trigger: GCTGGCAGTGTCTGTACAATCCTTTCCTAATGTCAAGCCAGTCAAGCTGCCCTCTGAGTCTCTTGAGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS GCA 72 bp | ATAACATGTCCTTTAGGATCAGTTTCTGGCCACGATTaGGGTGCCTGGTGGCATTGTGGTACATCTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: ITCPLGSVSGHD*GAWWHCGTSPH Trigger: GTGAGGAGATGTACCACAATGCCACCAGGCACCGCAATCGTGGCCAGAAACTGATCCTAAAGGACATGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CCA 72 bp | CTTGGTGACCTCAAGAGACTCAGAGGGCAGCTTGACTaGCTTGACATTAGGAAAGGATTGTACAGACACTGC | + |
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Preference number: 6 (lower is better) Translates to: LGDLKRLRGQLD*LDIRKGLYRHC Trigger: GCAGTGTCTGTACAATCCTTTCCTAATGTCAAGCCAGTCAAGCTGCCCTCTGAGTCTCTTGAGGTCACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CCA 72 bp | TTAGGATCAGTTTCTGGCCACGATTGCGGTGCCTGGTaGCATTGTGGTACATCTCCTCACAAAGTGAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LGSVSGHDCGAW*HCGTSPHKVSC Trigger: ACAACTCACTTTGTGAGGAGATGTACCACAATGCCACCAGGCACCGCAATCGTGGCCAGAAACTGATCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CAA 72 bp | CATAACATGTCCTTTAGGATCAGTTTCTGGCCACGATaGCGGTGCCTGGTGGCATTGTGGTACATCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: HNMSFRISFWPR*RCLVALWYISS Trigger: TGAGGAGATGTACCACAATGCCACCAGGCACCGCAATCGTGGCCAGAAACTGATCCTAAAGGACATGTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS GCA 72 bp | CACCTGAGTCACCATAGCAGGAATCTTGGCCCTGGTTaGCTGCACATAACATGTCCTTTAGGATCAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: HLSHHSRNLGPG*LHITCPLGSVS Trigger: AGAAACTGATCCTAAAGGACATGTTATGTGCAGGCAACCAGGGCCAAGATTCCTGCTATGGTGACTCAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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| CDS CCA 72 bp | AGTTTCTGGCCACGATTGCGGTGCCTGGTGGCATTGTaGTACATCTCCTCACAAAGTGAGTTGTCAATTATC | + |
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Preference number: 6 (lower is better) Translates to: SFWPRLRCLVAL*YISSQSELSII Trigger: GATAATTGACAACTCACTTTGTGAGGAGATGTACCACAATGCCACCAGGCACCGCAATCGTGGCCAGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024993.9 ENSMUST00000234609.2 |
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