Pregenerated sensors for PRSS28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024171Ensembl transcript IDs: ENSMUST00000015267.5, ENSMUST00000234259.2
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTTTACTGCCAGTTTATTGAGACAAATACAGCCACACCCCAATACAGCAGCCCAGGACATCCTTGTCAGTaGGGAAGGACAGGCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: VYCQFIETNTATPQYSSPGHPCQ*GRTGQG Trigger: TCCCTGGCCTGTCCTTCCCCACTGACAAGGATGTCC...TGGGCTGCTGTATTGGGGTGTGGCTGTATTTGTCTCAATAAACTGGCAGTAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR GCA 90 bp | CAATACAGCAGCCCAACCCCACACTGGGGTTTGCTGGACATCCTTGTCAGTGGGGGCCTCGGCCTGAGGTaGCAGCACAAAGCATGTCGT | + |
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Preference number: 4 (lower is better) Translates to: QYSSPTPHWGLLDILVSGGLGLR*QHKACR Trigger: ACGACATGCTTTGTGCTGGCACCTCAGGCCGAGGCC...CCCACTGACAAGGATGTCCAGCAAACCCCAGTGTGGGGTTGGGCTGCTGTATTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR TCA 90 bp | CCACACTGGGGTTTGCTGGACATCCTTGTCAGTGGGGAAGGACAGGCCAGGGAATGTACATTCTTAGGCTaGCCTGCCATGGCCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: PHWGLLDILVSGEGQARECTFLG*PAMATS Trigger: GGAAGTGGCCATGGCAGGTCAGCCTAAGAATGTACA...TTCCCTGGCCTGTCCTTCCCCACTGACAAGGATGTCCAGCAAACCCCAGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR TCA 90 bp | CCACACTGGGGTTTGCTGGACATCCTTGTCAGTGGGGAAGGACAGGCCAGGGAAAGTGGAGTCGAAGGTTaGGCTGTCTTTTGGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PHWGLLDILVSGEGQARESGVEG*AVFWQR Trigger: TCTCTGCCAAAAGACAGCTCAACCTTCGACTCCACT...TTCCCTGGCCTGTCCTTCCCCACTGACAAGGATGTCCAGCAAACCCCAGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR GCA 90 bp | AAGAACAGAGGAGCCATGAAGCTGTCTCTGATGATGGTCAGCAGCTGGTGGACTGAGCCCCCACAGATGTaGACCCAGGAGTTCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: KNRGAMKLSLMMVSSWWTEPPQM*TQEFTS Trigger: CGAGGTGAACTCCTGGGTGCACATCTGTGGGGGCTC...AGTCCACCAGCTGCTGACCATCATCAGAGACAGCTTCATGGCTCCTCTGTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR GCA 90 bp | GGGAAGAGGGCAGGGCGAGCAAGGAAGGGTCCAGGAAGTAAAGAACAGAGGAGCCGTCCTGACTTTGGATaGAGTGAGCAGCAGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GKRAGRARKGPGSKEQRSRPDFG*SEQQSE Trigger: TTCTGACTGCTGCTCACTGCATCCAAAGTCAGGACG...GCTCCTCTGTTCTTTACTTCCTGGACCCTTCCTTGCTCGCCCTGCCCTCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR GCA 90 bp | GAACAGAGGAGCCATGAAGCTGTCTCTGATGATGGTCAGCAGCTGGTGGACTCGCCTGTATCCACTTGTTaGTCTTCCAGCAGACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: EQRSHEAVSDDGQQLVDSPVSTC*SSSRPR Trigger: CCTTGGTCTGCTGGAAGAGCAACAAGTGGATACAGG...CGAGTCCACCAGCTGCTGACCATCATCAGAGACAGCTTCATGGCTCCTCTGTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR CCA 90 bp | CACTGGGGTTTGCTGGACATCCTTGTCAGTGGGGAAGGACAGGCCAGGGAAGAGCTTGTTGTCCTGAATTaGGATCTTCACCTCATGCAG | + |
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Preference number: 4 (lower is better) Translates to: HWGLLDILVSGEGQAREELVVLN*DLHLMQ Trigger: CTGCATGAGGTGAAGATCCCAATTCAGGACAACAAG...CTCTTCCCTGGCCTGTCCTTCCCCACTGACAAGGATGTCCAGCAAACCCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR GCA 90 bp | GTTTACTGCCAGTTTATTGAGACAAATACAGCCACACCCCAATACAGCAGCCCAATTCTTAGGCTGACCTaGCATGGCCACTTCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VYCQFIETNTATPQYSSPILRLT*HGHFPG Trigger: ACCAGGGAAGTGGCCATGGCAGGTCAGCCTAAGAAT...TGGGCTGCTGTATTGGGGTGTGGCTGTATTTGTCTCAATAAACTGGCAGTAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR CCA 90 bp | AAGAACAGAGGAGCCATGAAGCTGTCTCTGATGATGGTCAGCAGCTGGTGGACTTTTTGGCAGAGAGACTaGACTGACATTTGTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: KNRGAMKLSLMMVSSWWTFWQRD*TDICGC Trigger: ACATCCACAAATGTCAGTCCAGTCTCTCTGCCAAAA...AGTCCACCAGCTGCTGACCATCATCAGAGACAGCTTCATGGCTCCTCTGTTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR CAA 90 bp | ACTGGGGTTTGCTGGACATCCTTGTCAGTGGGGAAGGACAGGCCAGGGAAGAGGCTGCAATCGATCCCCTaGCTGACCACGCCCACCTGT | + |
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Preference number: 5 (lower is better) Translates to: TGVCWTSLSVGKDRPGKRLQSIP*LTTPTC Trigger: ACAGGTGGGCGTGGTCAGCAAGGGGATCGATTGCAG...CCTCTTCCCTGGCCTGTCCTTCCCCACTGACAAGGATGTCCAGCAAACCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR CAA 90 bp | AGGGCAGGGCGAGCAAGGAAGGGTCCAGGAAGTAAAGAACAGAGGAGCCATGAACTGCAGAGGCACACGTaGGAGAAGGTTGCCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RAGRARKGPGSKEQRSHELQRHT*EKVAPA Trigger: GGCTGGGGCAACCTTCTCCAACGTGTGCCTCTGCAG...TTCATGGCTCCTCTGTTCTTTACTTCCTGGACCCTTCCTTGCTCGCCCTGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS GCA 90 bp | CATGCAGTTGATAGGGAGGCTGCAGAGGCACACGTTGGAGAAGGTTaGCCCAGCCAACCAGCCAACACTGGTCAGTGGAGTCGAAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: HAVDREAAEAHVGEG*PSQPANTGQWSRRL Trigger: CAACCTTCGACTCCACTGACCAGTGTTGGCTGGTTGGCTGGGGCAACCTTCTCCAACGTGTGCCTCTGCAGCCTCCCTATCAACTGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS-3UTR CAA 90 bp | CCACACTGGGGTTTGCTGGACATCCTTGTCAGTGGGGAAGGACAGGCCAGGGAACTTCACCTCATGCAGTaGATAGGGAGGCTGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: PHWGLLDILVSGEGQARELHLMQ*IGRLQR Trigger: CCTCTGCAGCCTCCCTATCAACTGCATGAGGTGAAG...TTCCCTGGCCTGTCCTTCCCCACTGACAAGGATGTCCAGCAAACCCCAGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR CAA 90 bp | AGGGCAGGGCGAGCAAGGAAGGGTCCAGGAAGTAAAGAACAGAGGAGCCATGAAACACGTTGGAGAAGGTaGCCCCAGCCAACCAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: RAGRARKGPGSKEQRSHETRWRR*PQPTSQ Trigger: TTGGCTGGTTGGCTGGGGCAACCTTCTCCAACGTGT...TTCATGGCTCCTCTGTTCTTTACTTCCTGGACCCTTCCTTGCTCGCCCTGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS CCA 90 bp | CTCCTTATAGAGGTATACTTCCCCCACCTGGACCCGGTATACGGCTaGGTCGGCGTCCTGACTTTGGATGCAGTGAGCAGCAGTCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: LLIEVYFPHLDPVYG*VGVLTLDAVSSSQN Trigger: ATTCTGACTGCTGCTCACTGCATCCAAAGTCAGGACGCCGACCCAGCCGTATACCGGGTCCAGGTGGGGGAAGTATACCTCTATAAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS-3UTR CAA 90 bp | CTGGGGTTTGCTGGACATCCTTGTCAGTGGGGAAGGACAGGCCAGGGAAGAGGGAGGAGCTCTGGACTCTaGAGAAGATTGATGGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LGFAGHPCQWGRTGQGRGRSSGL*RRLMAD Trigger: ATCTGCCATCAATCTTCTCAAGAGTCCAGAGCTCCT...CCCTCTTCCCTGGCCTGTCCTTCCCCACTGACAAGGATGTCCAGCAAACCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR CAA 90 bp | CCACACTGGGGTTTGCTGGACATCCTTGTCAGTGGGGAAGGACAGGCCAGGGAAGGACTCTTGAGAAGATaGATGGCAGATTGTTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PHWGLLDILVSGEGQAREGLLRR*MADCCC Trigger: GCAGCAACAATCTGCCATCAATCTTCTCAAGAGTCC...TTCCCTGGCCTGTCCTTCCCCACTGACAAGGATGTCCAGCAAACCCCAGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR CAA 90 bp | AGGGCAGGGCGAGCAAGGAAGGGTCCAGGAAGTAAAGAACAGAGGAGCCATGAAACCTGTATCCACTTGTaGCTCTTCCAGCAGACCAAG | + |
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Preference number: 5 (lower is better) Translates to: RAGRARKGPGSKEQRSHETCIHL*LFQQTK Trigger: CTTGGTCTGCTGGAAGAGCAACAAGTGGATACAGGT...TTCATGGCTCCTCTGTTCTTTACTTCCTGGACCCTTCCTTGCTCGCCCTGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS-3UTR CAA 90 bp | GAACAGAGGAGCCATGAAGCTGTCTCTGATGATGGTCAGCAGCTGGTGGACTCGAAGATTGATGGCAGATaGTTGCTGCAATCGATCCCC | + |
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Preference number: 5 (lower is better) Translates to: EQRSHEAVSDDGQQLVDSKIDGR*LLQSIP Trigger: GGGGATCGATTGCAGCAACAATCTGCCATCAATCTT...CGAGTCCACCAGCTGCTGACCATCATCAGAGACAGCTTCATGGCTCCTCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015267.5 |
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| CDS CCA 72 bp | GAGGTATACTTCCCCCACCTGGACCCGGTATACGGCTaGGTCGGCGTCCTGACTTTGGATGCAGTGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: EVYFPHLDPVYG*VGVLTLDAVSS Trigger: GCTGCTCACTGCATCCAAAGTCAGGACGCCGACCCAGCCGTATACCGGGTCCAGGTGGGGGAAGTATACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS GCA 72 bp | CCCGGTATACGGCTGGGTCGGCGTCCTGACTTTGGATaGAGTGAGCAGCAGTCAGAATCCACTGAGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: PGIRLGRRPDFG*SEQQSESTEGG Trigger: TCCACCCTCAGTGGATTCTGACTGCTGCTCACTGCATCCAAAGTCAGGACGCCGACCCAGCCGTATACCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS GCA 72 bp | GATAGGGAGGCTGCAGAGGCACACGTTGGAGAAGGTTaGCCCAGCCAACCAGCCAACACTGGTCAGTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: DREAAEAHVGEG*PSQPANTGQWS Trigger: ACTCCACTGACCAGTGTTGGCTGGTTGGCTGGGGCAACCTTCTCCAACGTGTGCCTCTGCAGCCTCCCTATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS CAA 72 bp | ATCCCCTTGCTGACCACGCCCACCTGTATCCACTTGTaGCTCTTCCAGCAGACCAAGGGACCCCCAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: IPLLTTPTCIHL*LFQQTKGPPES Trigger: TGACTCTGGGGGTCCCTTGGTCTGCTGGAAGAGCAACAAGTGGATACAGGTGGGCGTGGTCAGCAAGGGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS CAA 90 bp | GATCTTCACCTCATGCAGTTGATAGGGAGGCTGCAGAGGCACACGTaGGAGAAGGTTGCCCCAGCCAACCAGCCAACACTGGTCAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: DLHLMQLIGRLQRHT*EKVAPANQPTLVSG Trigger: TCCACTGACCAGTGTTGGCTGGTTGGCTGGGGCAACCTTCTCCAACGTGTGCCTCTGCAGCCTCCCTATCAACTGCATGAGGTGAAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS CAA 90 bp | TTGCTGCAATCGATCCCCTTGCTGACCACGCCCACCTGTATCCACTaGTTGCTCTTCCAGCAGACCAAGGGACCCCCAGAGTCACCAAAA | + |
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Preference number: 6 (lower is better) Translates to: LLQSIPLLTTPTCIH*LLFQQTKGPPESPK Trigger: TTTTGGTGACTCTGGGGGTCCCTTGGTCTGCTGGAAGAGCAACAAGTGGATACAGGTGGGCGTGGTCAGCAAGGGGATCGATTGCAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS CCA 72 bp | GGCCTGAGGTGCCAGCACAAAGCATGTCGTCAAAGATaGCCACAGCTTTGTGCTCGTCGGATGACTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GLRCQHKACRQR*PQLCARRMTSS Trigger: GGAAGAAGTCATCCGACGAGCACAAAGCTGTGGCCATCTTTGACGACATGCTTTGTGCTGGCACCTCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS TCA 72 bp | GCCAACCAGCCAACACTGGTCAGTGGAGTCGAAGGTTaGGCTGTCTTTTGGCAGAGAGACTGGACTGACATT | + |
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Preference number: 6 (lower is better) Translates to: ANQPTLVSGVEG*AVFWQRDWTDI Trigger: AATGTCAGTCCAGTCTCTCTGCCAAAAGACAGCTCAACCTTCGACTCCACTGACCAGTGTTGGCTGGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS CAA 72 bp | GGATCCAGGCTAAGGAGCTCTGGACTCTTGAGAAGATaGATGGCAGATTGTTGCTGCAATCGATCCCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: GSRLRSSGLLRR*MADCCCNRSPC Trigger: GCAAGGGGATCGATTGCAGCAACAATCTGCCATCAATCTTCTCAAGAGTCCAGAGCTCCTTAGCCTGGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS GCA 72 bp | CTGACATTTGTGGATGTGACCAGGAGGGCAGTCAACTaGATCAGGGCCAAGTCAAACCTCTTACTAACATCG | + |
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Preference number: 6 (lower is better) Translates to: LTFVDVTRRAVN*IRAKSNLLLTS Trigger: CGATGTTAGTAAGAGGTTTGACTTGGCCCTGATGCAGTTGACTGCCCTCCTGGTCACATCCACAAATGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS CCA 72 bp | CCTATAAGCCCGCTTACAGCTCTTGTTGTCCTGAATTaGGATCTTCACCTCATGCAGTTGATAGGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PISPLTALVVLN*DLHLMQLIGRL Trigger: CAGCCTCCCTATCAACTGCATGAGGTGAAGATCCCAATTCAGGACAACAAGAGCTGTAAGCGGGCTTATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS CAA 90 bp | ATGACTTCTTCCTATAAGCCCGCTTACAGCTCTTGTTGTCCTGAATaGGGATCTTCACCTCATGCAGTTGATAGGGAGGCTGCAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: MTSSYKPAYSSCCPE*GSSPHAVDREAAEA Trigger: TGCCTCTGCAGCCTCCCTATCAACTGCATGAGGTGAAGATCCCAATTCAGGACAACAAGAGCTGTAAGCGGGCTTATAGGAAGAAGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS CAA 72 bp | TCCTATAAGCCCGCTTACAGCTCTTGTTGTCCTGAATaGGGATCTTCACCTCATGCAGTTGATAGGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SYKPAYSSCCPE*GSSPHAVDREA Trigger: AGCCTCCCTATCAACTGCATGAGGTGAAGATCCCAATTCAGGACAACAAGAGCTGTAAGCGGGCTTATAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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| CDS CAA 72 bp | TGTGTTGATGGATCCAGGCTAAGGAGCTCTGGACTCTaGAGAAGATTGATGGCAGATTGTTGCTGCAATCGA | + |
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Preference number: 6 (lower is better) Translates to: CVDGSRLRSSGL*RRLMADCCCNR Trigger: TCGATTGCAGCAACAATCTGCCATCAATCTTCTCAAGAGTCCAGAGCTCCTTAGCCTGGATCCATCAACACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015267.5 ENSMUST00000234259.2 |
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