Pregenerated sensors for PRSS27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050762Ensembl transcript IDs: ENSMUST00000059482.6
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCGCGTGTGGTCCTGGCTaGTGCAGCTTCAGTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LAWQTGTQYLQMYSGWGSACGPG*CSFSAP Trigger: GGGGGCACTGAAGCTGCAGCAGCCAGGACCACACGC...GGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR TCA 90 bp | GGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTGTGGGGCTGGCTTCAGTCCCAGATCTaGGCAGCAGCGGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GNTVFTNVQWVGLHLWGWLQSQI*AAAAAA Trigger: TGCTGCTGCCGCTGCTGCTCAGATCTGGGACTGAAG...CCAGCCCCACAGGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR TCA 90 bp | CAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCCCCGCCAGGCGCTGCTaGCCTTGGGAGTCTTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: QLAWQTGTQYLQMYSGWGPARRC*PWESFC Trigger: ACAAAAAGACTCCCAAGGTCAGCAGCGCCTGGCGGG...GCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR GCA 90 bp | GGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTGTGGGGCTGGGGCACAGCAAGTTTCTaGAGGACCCGTGGGTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GNTVFTNVQWVGLHLWGWGTASF*RTRGLG Trigger: ACCCAACCCACGGGTCCTGCAGAAACTTGCTGTGCC...CCAGCCCCACAGGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CCA 90 bp | GGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTGTGTGGATTCCGTTGCGCTaGATGCTGACCTGCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GRREHSIYKCTVGGAPPVWIPLR*MLTCQG Trigger: GCCCTGGCAGGTCAGCATCCAGCGCAACGGAATCCA...CACAGGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CCA 90 bp | CGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTGTGGGGCTGCTGCCCCCACAGAAGTaGATTCCGTTGCGCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: REHSIYKCTVGGAPPVGLLPPQK*IPLRWM Trigger: CATCCAGCGCAACGGAATCCACTTCTGTGGGGGCAG...CAGCCCCACAGGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR TCA 90 bp | CGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTGTGGGGCTGGAAGGATGTAATTGGTaGAGGTCACCGGCCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: REHSIYKCTVGGAPPVGLEGCNW*RSPAPA Trigger: TGCAGGGGCCGGTGACCTTCACCAATTACATCCTTC...CAGCCCCACAGGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR TCA 90 bp | GGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTGTGGTGCCTGCTCTCCCCTaGAACTGCAGTTCTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: GRREHSIYKCTVGGAPPVVPALP*NCSSGM Trigger: CATCCCAGAACTGCAGTTTCAGGGGAGAGCAGGCAC...CACAGGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR GCA 90 bp | CAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCGAGGACCCATGTTGGTaGGATGAGACTGCCCCCACA | + |
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Preference number: 4 (lower is better) Translates to: QLAWQTGTQYLQMYSGWGEDPCW*DETAPT Trigger: TGTGGGGGCAGTCTCATCGCACCAACATGGGTCCTC...GCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR GCA 90 bp | GCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCTTGCTGCTGGGTGCCTaGTCTCCCCTGAAACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: AGMADGNTVFTNVQWVGLLLLGA*SPLKLQ Trigger: CTGCAGTTTCAGGGGAGAGCAGGCACCCAGCAGCAA...GAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR GCA 90 bp | CGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTGTGGGGCTGGAGTCTTTTTGTTGCTaGTGGGTGCCTGCTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: REHSIYKCTVGGAPPVGLESFCC*WVPALP Trigger: GGGGAGAGCAGGCACCCAGCAGCAACAAAAAGACTC...CAGCCCCACAGGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CCA 90 bp | CTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACGGATGTAGACACCTaGGCGATTCCGACGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: LAWQTGTQYLQMYSGWGSTDVDT*AIPTGT Trigger: TGTGCCCGTCGGAATCGCCCAGGTGTCTACATCCGT...GGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR GCA 90 bp | GTGGTGAACATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACCAGGGCCAGCACCATTaGATGGGCAGCCAGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VVNIYKSSWHGRREHSIYQGQHH*MGSQAR Trigger: CCTTGCCTGGCTGCCCATGCAATGGTGCTGGCCCTG...GTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATATGTTCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR GCA 90 bp | TTGGTGGTGAACATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTCGCTGGATGCTGACCTaGCAGGGCCACTCACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LVVNIYKSSWHGRREHSIRWMLT*QGHSPS Trigger: AGAAGGTGAGTGGCCCTGGCAGGTCAGCATCCAGCG...AATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATATGTTCACCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR GCA 90 bp | GTGGTGAACATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACGATCCTGAGCAGCAGTaGTCCCAGGGCCAGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVNIYKSSWHGRREHSIYDPEQQ*SQGQHH Trigger: ATGGTGCTGGCCCTGGGAGCACTGCTGCTCAGGATC...GTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATATGTTCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CCA 90 bp | CTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCATATGTCCGAAGTGTTaGAGAAGCAGTGTGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LAWQTGTQYLQMYSGWGSICPKC*RSSVQQ Trigger: CTGCTGCACACTGCTTCTCCAACACTTCGGACATAT...GGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CCA 90 bp | TTGGTGGTGAACATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTGCCTGCACCCACGACTaGTCCACAAGGCACACCAGT | + |
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Preference number: 4 (lower is better) Translates to: LVVNIYKSSWHGRREHSIACTHD*STRHTS Trigger: ACTGGTGTGCCTTGTGGACCAGTCGTGGGTGCAGGC...AATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATATGTTCACCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CCA 90 bp | TATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGGCCAGCACCATTGCATaGGCAGCCAGGCAAGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: YIKAAGMADGNTVFTNVQASTIA*AARQGA Trigger: CGCCCCTTGCCTGGCTGCCCATGCAATGGTGCTGGC...CTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR TCA 90 bp | GCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCACTGCAGTTCTGGGATaGTTTGGTGGATCCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: AGMADGNTVFTNVQWVGLTAVLG*FGGSIC Trigger: ACAAATGGATCCACCAAATCATCCCAGAACTGCAGT...GAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR GCA 90 bp | TTTTTGGTGGTGAACATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTTACAGGCGTCCTTCTTaGCCTCTGCGAAGCCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: FLVVNIYKSSWHGRREHSYRRPS*PLRSLH Trigger: GTGCAGGCTTCGCAGAGGGCAAGAAGGACGCCTGTA...ACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATATGTTCACCACCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CCA 90 bp | GCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCCTGAAACTGCAGTTCTaGGATGATTTGGTGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWQTGTQYLQMYSGWGSTLKLQF*DDLVDP Trigger: TGGATCCACCAAATCATCCCAGAACTGCAGTTTCAG...GGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR GCA 90 bp | TATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGCTGATCACCCCAGCCTaGACCCACGACTGGTCCACA | + |
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Preference number: 4 (lower is better) Translates to: YIKAAGMADGNTVFTNVQLITPA*THDWST Trigger: TGTGGACCAGTCGTGGGTGCAGGCTGGGGTGATCAG...CTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CCA 90 bp | ATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACACAAGGCGTGTGGTCCTaGCTGCTGCAGCTTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: IYKSSWHGRREHSIYKCTQGVWS*LLQLQC Trigger: GCACTGAAGCTGCAGCAGCCAGGACCACACGCCTTG...TGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR TCA 90 bp | AACATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTCGCCCACCATCCGGTTaGACATCTTTGGATGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: NIYKSSWHGRREHSIYKCRPPSG*TSLDAH Trigger: GTGGGCATCCAAAGATGTTCAACCGGATGGTGGGCG...ACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CCA 90 bp | ATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGACATACAAGGCGTGTaGTCCTGGCTGCTGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: IYKSSWHGRREHSIYKCTDIQGV*SWLLQL Trigger: AAGCTGCAGCAGCCAGGACCACACGCCTTGTATGTC...TGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR GCA 90 bp | TATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGCTTGGTACTGAGGATTaGTTTTCACCTGCTTCACGG | + |
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Preference number: 4 (lower is better) Translates to: YIKAAGMADGNTVFTNVQLGTED*FSPASR Trigger: CCGTGAAGCAGGTGAAAAGCAATCCTCAGTACCAAG...CTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CCA 90 bp | ATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACATTGATGGTTTTGAGCTaGAAGTCAGACTCAACATCT | + |
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Preference number: 4 (lower is better) Translates to: IYKSSWHGRREHSIYKCTLMVLS*KSDSTS Trigger: AGATGTTGAGTCTGACTTCCAGCTCAAAACCATCAA...TGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS TCA 90 bp | GATGCCCACAGGCTCTCAGAGTCCTGGCCCCTTCAGTCCCAGATCTaGGCAGCAGCGGCAGCAGCAGCAGGGCAGCGATGTGGGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: DAHRLSESWPLQSQI*AAAAAAAGQRCGAA Trigger: GGCAGCCCCACATCGCTGCCCTGCTGCTGCTGCCGCTGCTGCTCAGATCTGGGACTGAAGGGGCCAGGACTCTGAGAGCCTGTGGGCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS GCA 90 bp | AGACTGCCCCCACAGAAGTGGATTCCGTTGCGCTGGATGCTGACCTaGCAGGGCCACTCACCTTCTAAGGCGTTCTCCCCGCCCACCATC | + |
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Preference number: 5 (lower is better) Translates to: RLPPQKWIPLRWMLT*QGHSPSKAFSPPTI Trigger: GATGGTGGGCGGGGAGAACGCCTTAGAAGGTGAGTGGCCCTGGCAGGTCAGCATCCAGCGCAACGGAATCCACTTCTGTGGGGGCAGTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS TCA 90 bp | AGGGCCACTCACCTTCTAAGGCGTTCTCCCCGCCCACCATCCGGTTaGACATCTTTGGATGCCCACAGGCTCTCAGAGTCCTGGCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: RATHLLRRSPRPPSG*TSLDAHRLSESWPL Trigger: AAGGGGCCAGGACTCTGAGAGCCTGTGGGCATCCAAAGATGTTCAACCGGATGGTGGGCGGGGAGAACGCCTTAGAAGGTGAGTGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS GCA 90 bp | AGCAGGTTGCACTTGGGCGTGTCAATGATGGGCACAGCAAGTTTCTaGAGGACCCGTGGGTTGGGTAGTCGGTCTTGTTCACTGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SRLHLGVSMMGTASF*RTRGLGSRSCSLGL Trigger: CAGCCCCAGTGAACAAGACCGACTACCCAACCCACGGGTCCTGCAGAAACTTGCTGTGCCCATCATTGACACGCCCAAGTGCAACCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CAA 90 bp | CAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTTACAGGCGTCCTTCTaGCCCTCTGCGAAGCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QLAWQTGTQYLQMYSGWGLQASF*PSAKPA Trigger: TGCAGGCTTCGCAGAGGGCAAGAAGGACGCCTGTAA...GCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CAA 90 bp | GGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTGTGGGGCTGGACCTTGGGAGTCTTTTaGTTGCTGCTGGGTGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GNTVFTNVQWVGLHLWGWTLGVF*LLLGAC Trigger: GCAGGCACCCAGCAGCAACAAAAAGACTCCCAAGGT...CCAGCCCCACAGGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CAA 90 bp | GCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTACAGCAGGTTGCACTaGGGCGTGTCAATGATGGGC | + |
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Preference number: 5 (lower is better) Translates to: AWQTGTQYLQMYSGWGSTYSRLH*GVSMMG Trigger: GCCCATCATTGACACGCCCAAGTGCAACCTGCTGTA...GGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CAA 90 bp | TTTTTGGTGGTGAACATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTCCAGGGCCAGCACCATaGCATGGGCAGCCAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: FLVVNIYKSSWHGRREHSPGPAP*HGQPGK Trigger: CTTGCCTGGCTGCCCATGCAATGGTGCTGGCCCTGG...ACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATATGTTCACCACCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS TCA 90 bp | ACTCAACATCTTTGTTGTACAGCAGGTTGCACTTGGGCGTGTCAATaGTGGGCACAGCAAGTTTCTGCAGGACCCGTGGGTTGGGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: TQHLCCTAGCTWACQ*WAQQVSAGPVGWVV Trigger: GACTACCCAACCCACGGGTCCTGCAGAAACTTGCTGTGCCCATCATTGACACGCCCAAGTGCAACCTGCTGTACAACAAAGATGTTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CAA 90 bp | GGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTGTGGATATGTCCGAAGTGTaGGAGAAGCAGTGTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GRREHSIYKCTVGGAPPVDMSEV*EKQCAA Trigger: TGCTGCACACTGCTTCTCCAACACTTCGGACATATC...CACAGGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CAA 90 bp | GGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCTGTGACTGGAGGCCATGCCTaGGTACTGAGGATTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: GRREHSIYKCTVGGAPPVTGGHA*VLRIAF Trigger: AAAAGCAATCCTCAGTACCAAGGCATGGCCTCCAGT...CACAGGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CAA 90 bp | GCATGGCAGACGGGAACACAGTATTTACAAATGTACAGTGGGTGGGGCTCCACCCACAGCATGTCATCCTaGATGGTTTTGAGCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: AWQTGTQYLQMYSGWGSTHSMSS*MVLSWK Trigger: CTTCCAGCTCAAAACCATCAAGGATGACATGCTGTG...GGTGGAGCCCCACCCACTGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CAA 90 bp | GTGGTGAACATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACCAGAAGTGGATTCCGTaGCGCTGGATGCTGACCTGC | + |
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Preference number: 5 (lower is better) Translates to: VVNIYKSSWHGRREHSIYQKWIP*RWMLTC Trigger: GCAGGTCAGCATCCAGCGCAACGGAATCCACTTCTG...GTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATATGTTCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CCA 90 bp | TTTTTGTTGCTGCTGGGTGCCTGCTCTCCCCTGAAACTGCAGTTCTaGGATGATTTGGTGGATCCATTTGTGATGAGAAGTCACACGGAT | + |
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Preference number: 5 (lower is better) Translates to: FLLLLGACSPLKLQF*DDLVDPFVMRSHTD Trigger: ATCCGTGTGACTTCTCATCACAAATGGATCCACCAAATCATCCCAGAACTGCAGTTTCAGGGGAGAGCAGGCACCCAGCAGCAACAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CAA 90 bp | TTTTTGGTGGTGAACATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTTCAGACTCAACATCTTaGTTGTACAGCAGGTTGCAC | + |
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Preference number: 5 (lower is better) Translates to: FLVVNIYKSSWHGRREHSSDSTS*LYSRLH Trigger: GTGCAACCTGCTGTACAACAAAGATGTTGAGTCTGA...ACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATATGTTCACCACCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS-3UTR CAA 90 bp | ATATATAAAAGCAGCTGGCATGGCAGACGGGAACACAGTATTTACAAATGTACAGACTCAACATCTTTGTaGTACAGCAGGTTGCACTTG | + |
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Preference number: 5 (lower is better) Translates to: IYKSSWHGRREHSIYKCTDSTSL*YSRLHL Trigger: CAAGTGCAACCTGCTGTACAACAAAGATGTTGAGTC...TGTACATTTGTAAATACTGTGTTCCCGTCTGCCATGCCAGCTGCTTTTATATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS TCA 72 bp | AGGCTCTCAGAGTCCTGGCCCCTTCAGTCCCAGATCTaGGCAGCAGCGGCAGCAGCAGCAGGGCAGCGATGT | + |
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Preference number: 6 (lower is better) Translates to: RLSESWPLQSQI*AAAAAAAGQRC Trigger: ACATCGCTGCCCTGCTGCTGCTGCCGCTGCTGCTCAGATCTGGGACTGAAGGGGCCAGGACTCTGAGAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CCA 72 bp | CACCTGCTTCACGGGGACATACAAGGCGTGTGGTCCTaGCTGCTGCAGCTTCAGTGCCCCCAGCAGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: HLLHGDIQGVWS*LLQLQCPQQDL Trigger: CAGGTCCTGCTGGGGGCACTGAAGCTGCAGCAGCCAGGACCACACGCCTTGTATGTCCCCGTGAAGCAGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 90 bp | CAGGGCCACTCACCTTCTAAGGCGTTCTCCCCGCCCACCATCCGGTaGAACATCTTTGGATGCCCACAGGCTCTCAGAGTCCTGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: QGHSPSKAFSPPTIR*NIFGCPQALRVLAP Trigger: AGGGGCCAGGACTCTGAGAGCCTGTGGGCATCCAAAGATGTTCAACCGGATGGTGGGCGGGGAGAACGCCTTAGAAGGTGAGTGGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS GCA 72 bp | CCACAGAAGTGGATTCCGTTGCGCTGGATGCTGACCTaGCAGGGCCACTCACCTTCTAAGGCGTTCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: PQKWIPLRWMLT*QGHSPSKAFSP Trigger: CGGGGAGAACGCCTTAGAAGGTGAGTGGCCCTGGCAGGTCAGCATCCAGCGCAACGGAATCCACTTCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CCA 72 bp | ACCCATGTTGGTGCGATGAGACTGCCCCCACAGAAGTaGATTCCGTTGCGCTGGATGCTGACCTGCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: THVGAMRLPPQK*IPLRWMLTCQG Trigger: GCCCTGGCAGGTCAGCATCCAGCGCAACGGAATCCACTTCTGTGGGGGCAGTCTCATCGCACCAACATGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 72 bp | CTCCACCAGAGCCACGTCGGCACTGGAGGCCATGCCTaGGTACTGAGGATTGCTTTTCACCTGCTTCACGGG | + |
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Preference number: 6 (lower is better) Translates to: LHQSHVGTGGHA*VLRIAFHLLHG Trigger: CCCGTGAAGCAGGTGAAAAGCAATCCTCAGTACCAAGGCATGGCCTCCAGTGCCGACGTGGCTCTGGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS TCA 72 bp | CACCTTCTAAGGCGTTCTCCCCGCCCACCATCCGGTTaGACATCTTTGGATGCCCACAGGCTCTCAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: HLLRRSPRPPSG*TSLDAHRLSES Trigger: GGACTCTGAGAGCCTGTGGGCATCCAAAGATGTTCAACCGGATGGTGGGCGGGGAGAACGCCTTAGAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS TCA 72 bp | AGGGATCAGGAAGGCACACAGGAAGGATGTAATTGGTaGAGGTCACCGGCCCCTGCAGCTCCACCAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: RDQEGTQEGCNW*RSPAPAAPPEP Trigger: TGGCTCTGGTGGAGCTGCAGGGGCCGGTGACCTTCACCAATTACATCCTTCCTGTGTGCCTTCCTGATCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS GCA 72 bp | GCAGCTCCACCAGAGCCACGTCGGCACTGGAGGCCATaGCTTGGTACTGAGGATTGCTTTTCACCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: AAPPEPRRHWRP*LGTEDCFSPAS Trigger: TGAAGCAGGTGAAAAGCAATCCTCAGTACCAAGGCATGGCCTCCAGTGCCGACGTGGCTCTGGTGGAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CCA 72 bp | CCTGGCTGCTGCAGCTTCAGTGCCCCCAGCAGGACCTaGTATATGGATATGTCCGAAGTGTTGGAGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PGCCSFSAPSRT*YMDMSEVLEKQ Trigger: CTGCTTCTCCAACACTTCGGACATATCCATATACCAGGTCCTGCTGGGGGCACTGAAGCTGCAGCAGCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 72 bp | TCACCTTCTAAGGCGTTCTCCCCGCCCACCATCCGGTaGAACATCTTTGGATGCCCACAGGCTCTCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SPSKAFSPPTIR*NIFGCPQALRV Trigger: GACTCTGAGAGCCTGTGGGCATCCAAAGATGTTCAACCGGATGGTGGGCGGGGAGAACGCCTTAGAAGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS GCA 72 bp | CACTTGGGCGTGTCAATGATGGGCACAGCAAGTTTCTaGAGGACCCGTGGGTTGGGTAGTCGGTCTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HLGVSMMGTASF*RTRGLGSRSCS Trigger: TGAACAAGACCGACTACCCAACCCACGGGTCCTGCAGAAACTTGCTGTGCCCATCATTGACACGCCCAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CCA 72 bp | GCTGCAGCTTCAGTGCCCCCAGCAGGACCTGGTATATaGATATGTCCGAAGTGTTGGAGAAGCAGTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: AAASVPPAGPGI*ICPKCWRSSVQ Trigger: CTGCACACTGCTTCTCCAACACTTCGGACATATCCATATACCAGGTCCTGCTGGGGGCACTGAAGCTGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS TCA 72 bp | CTTTGTTGTACAGCAGGTTGCACTTGGGCGTGTCAATaGTGGGCACAGCAAGTTTCTGCAGGACCCGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LCCTAGCTWACQ*WAQQVSAGPVG Trigger: ACCCACGGGTCCTGCAGAAACTTGCTGTGCCCATCATTGACACGCCCAAGTGCAACCTGCTGTACAACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 90 bp | AGCTGGAAGTCAGACTCAACATCTTTGTTGTACAGCAGGTTGCACTaGGGCGTGTCAATGATGGGCACAGCAAGTTTCTGCAGGACCCGT | + |
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Preference number: 6 (lower is better) Translates to: SWKSDSTSLLYSRLH*GVSMMGTASFCRTR Trigger: ACGGGTCCTGCAGAAACTTGCTGTGCCCATCATTGACACGCCCAAGTGCAACCTGCTGTACAACAAAGATGTTGAGTCTGACTTCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 72 bp | GCCTGCTCTCCCCTGAAACTGCAGTTCTGGGATGATTaGGTGGATCCATTTGTGATGAGAAGTCACACGGAT | + |
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Preference number: 6 (lower is better) Translates to: ACSPLKLQFWDD*VDPFVMRSHTD Trigger: ATCCGTGTGACTTCTCATCACAAATGGATCCACCAAATCATCCCAGAACTGCAGTTTCAGGGGAGAGCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 90 bp | GTTTTGAGCTGGAAGTCAGACTCAACATCTTTGTTGTACAGCAGGTaGCACTTGGGCGTGTCAATGATGGGCACAGCAAGTTTCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VLSWKSDSTSLLYSR*HLGVSMMGTASFCR Trigger: CCTGCAGAAACTTGCTGTGCCCATCATTGACACGCCCAAGTGCAACCTGCTGTACAACAAAGATGTTGAGTCTGACTTCCAGCTCAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 72 bp | TCAGACTCAACATCTTTGTTGTACAGCAGGTTGCACTaGGGCGTGTCAATGATGGGCACAGCAAGTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SDSTSLLYSRLH*GVSMMGTASFC Trigger: GCAGAAACTTGCTGTGCCCATCATTGACACGCCCAAGTGCAACCTGCTGTACAACAAAGATGTTGAGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 90 bp | TCATCCTTGATGGTTTTGAGCTGGAAGTCAGACTCAACATCTTTGTaGTACAGCAGGTTGCACTTGGGCGTGTCAATGATGGGCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLMVLSWKSDSTSL*YSRLHLGVSMMGTA Trigger: TGCTGTGCCCATCATTGACACGCCCAAGTGCAACCTGCTGTACAACAAAGATGTTGAGTCTGACTTCCAGCTCAAAACCATCAAGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 90 bp | ATGTCATCCTTGATGGTTTTGAGCTGGAAGTCAGACTCAACATCTTaGTTGTACAGCAGGTTGCACTTGGGCGTGTCAATGATGGGCACA | + |
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Preference number: 6 (lower is better) Translates to: MSSLMVLSWKSDSTS*LYSRLHLGVSMMGT Trigger: TGTGCCCATCATTGACACGCCCAAGTGCAACCTGCTGTACAACAAAGATGTTGAGTCTGACTTCCAGCTCAAAACCATCAAGGATGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 72 bp | ATGGTTTTGAGCTGGAAGTCAGACTCAACATCTTTGTaGTACAGCAGGTTGCACTTGGGCGTGTCAATGATG | + |
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Preference number: 6 (lower is better) Translates to: MVLSWKSDSTSL*YSRLHLGVSMM Trigger: CATCATTGACACGCCCAAGTGCAACCTGCTGTACAACAAAGATGTTGAGTCTGACTTCCAGCTCAAAACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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| CDS CAA 72 bp | TTGATGGTTTTGAGCTGGAAGTCAGACTCAACATCTTaGTTGTACAGCAGGTTGCACTTGGGCGTGTCAATG | + |
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Preference number: 6 (lower is better) Translates to: LMVLSWKSDSTS*LYSRLHLGVSM Trigger: CATTGACACGCCCAAGTGCAACCTGCTGTACAACAAAGATGTTGAGTCTGACTTCCAGCTCAAAACCATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059482.6 |
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