Pregenerated sensors for PRSS22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045027Ensembl transcript IDs: ENSMUST00000041649.8
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACAGAGTCCTCGATTaGGGGGCGGATCCTCTATGTGGGCGGTTCCAGAACTTCCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHTHRVLD*GADPLCGRFQNFLV Trigger: AACAAGGAAGTTCTGGAACCGCCCACATAGAGGATCCGCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| 3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATaGAGGGGCGGATCCTCTATGTGGGCGGTTCCAGAACTTCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: THTHTHTHTHTQSPR*RGGSSMWAVPELPC Trigger: ACAAGGAAGTTCTGGAACCGCCCACATAGAGGATCCGCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| 3UTR-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGGCGGTTCCAGAACTTCCTaGTTCTCTCGCTCAGGCCGC | + |
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Preference number: 3 (lower is better) Translates to: THTHTHTHTHTQSPRLRGGSRTS*FSRSGR Trigger: GCGGCCTGAGCGAGAGAACAAGGAAGTTCTGGAACC...GCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| 3UTR TCA 72 bp | ACACACACACACACACACACACACAGAGTCCTCGATTaGGGGGCGGATCCTCTATGTGGGCGGTTCCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: THTHTHTHRVLD*GADPLCGRFQN Trigger: GTTCTGGAACCGCCCACATAGAGGATCCGCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGTTACAGCAGAGAGAATaGCAGGAGGCTGCTCATCTT | + |
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Preference number: 3 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLLQQRE*QEAAHL Trigger: AAGATGAGCAGCCTCCTGCAATTCTCTCTGCTGTAA...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR TCA 90 bp | GAGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTCCACCCAGCGGTTGGTaGGCAGGGAGCCTGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: EAHTHTHTHTHTHTESSIPPSGW*AGSLHS Trigger: ACTGTGCAGGCTCCCTGCTCACCAACCGCTGGGTGG...AATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR TCA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGTCGGTGATGGCTTCCTaGCCGGCTCCCCGCCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLSVMAS*PAPRQY Trigger: GTACTGGCGGGGAGCCGGTCAGGAAGCCATCACCGA...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGGCCTGGTCCCCACCCAGTaGTGGGGGAGGTCTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTQSPRLRGLVPTQ*WGRSGD Trigger: ATCTCCAGACCTCCCCCAGCACTGGGTGGGGACCAG...GCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGGCATCCGGTTCAGCTGCTaGGGCTTCCCACAGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHTQSPRLRGIRFSC*GFPQSG Trigger: CCCAGACTGTGGGAAGCCTCAGCAGCTGAACCGGAT...GCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR TCA 90 bp | GAGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTACAGCATGCCCTCGGTaGTGGCTTCCTGACCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EAHTHTHTHTHTHTESSITACPR*WLPDRL Trigger: GAGCCGGTCAGGAAGCCATCACCGAGGGCATGCTGT...AATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR TCA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGCGCAGCTGCACCCCTTaGACGATCCTTTGCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLRSCTP*TILCTQ Trigger: CTGGGTGCAAAGGATCGTTCAAGGGGTGCAGCTGCG...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGGCGCCACTGGGCATCCATaGTGTCCTCACCTCCCACAA | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHTQSPRLRGATGHP*CPHLPQ Trigger: TTGTGGGAGGTGAGGACAGCATGGATGCCCAGTGGC...GCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR GCA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGGCACTCCATCCTGGATaGTTCCCCAGCCGGCAATCC | + |
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Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLALHPG*FPSRQS Trigger: GGATTGCCGGCTGGGGAAGCATCCAGGATGGAGTGC...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CCA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGGTCCCCACCCAGTGCTaGGGGAGGTCTGGAGATCAT | + |
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Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLVPTQC*GRSGDH Trigger: ATGATCTCCAGACCTCCCCCAGCACTGGGTGGGGAC...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CCA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGTCCAGCAGTCGGTCTTaGGAGGGAGACGGACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLSSSRS*EGDGQR Trigger: CCTCTGTCCGTCTCCCTCCCAAGACCGACTGCTGGA...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| 3UTR CAA 72 bp | CACACACACACACACACACACACACAGAGTCCTCGATaGAGGGGCGGATCCTCTATGTGGGCGGTTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTHTQSPR*RGGSSMWAVPE Trigger: TTCTGGAACCGCCCACATAGAGGATCCGCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR TCA 90 bp | GAGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGGATGGTGGCAGCACTaGTGGGAGCTGTGGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: EAHTHTHTHTHTHTESSIGWWQH*WELWKS Trigger: TGACTTCCACAGCTCCCATCAGTGCTGCCACCATCC...AATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGGCCAAGAATACCTGGGGTaGGGCAGCACCCAAGCAATG | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHTQSPRLRGQEYLG*GSTQAM Trigger: CATTGCTTGGGTGCTGCCTCACCCCAGGTATTCTTG...GCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CCA 90 bp | GAGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTAGGGAGCCTGCACAGTaGTGGGAGCCATTCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: EAHTHTHTHTHTHTESSIREPAQ*WEPFLR Trigger: CCTCAAGAATGGCTCCCACCACTGTGCAGGCTCCCT...AATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CCA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGTACTTTCTGGGACCTTaGGCCTGGGCTCCCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLYFLGP*AWAPQL Trigger: AAGCTGGGGAGCCCAGGCCCAAGGTCCCAGAAAGTA...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGGCAGTCAGGTAGGCAGATaGGCAGGATCCGCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTQSPRLRGSQVGR*AGSAQR Trigger: TCTCTGAGCGGATCCTGCCCATCTGCCTACCTGACT...GCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR GCA 90 bp | GAGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTTTGCTCTTAAAGCAGTaGGCGGCTGTGACCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: EAHTHTHTHTHTHTESSILLLKQ*AAVTTQ Trigger: CTGGGTGGTCACAGCCGCGCACTGCTTTAAGAGCAA...AATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CCA 90 bp | GAGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTACAATCCAGGGCCACTaGGCATCCATGCTGTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: EAHTHTHTHTHTHTESSITIQGH*ASMLSS Trigger: TGAGGACAGCATGGATGCCCAGTGGCCCTGGATTGT...AATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGGCGGCCCCCAACAATACTaGGAACAGAGATGGTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHTQSPRLRGGPQQY*EQRWFV Trigger: GACAAACCATCTCTGTTCTCAGTATTGTTGGGGGCC...GCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR TCA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGAGTTCGGAGTCGATaGTGGGCACCTTCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLRVRSR*WAPSAS Trigger: AGAAGCTGAAGGTGCCCATCATCGACTCCGAACTCT...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR GCA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGGCAGCACCCAAGCAATaGCTACTTTCTGGGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLAAPKQ*LLSGTL Trigger: CAAGGTCCCAGAAAGTAGGCATTGCTTGGGTGCTGC...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CCA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGCAATGTCTGCATaGGTTCCCTCCTTCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLRAMSA*VPSFQE Trigger: TTCTTGGAAGGAGGGAACCCATGCAGACATTGCCCT...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CCA 90 bp | CTCCATCCTGGATGCTTCCCCAGCCGGCAATCCAGCAGTCGGTCTTaGGAGGGAGACGGACAGAGGAGTCAGGTAGGCAGATGGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: LHPGCFPSRQSSSRS*EGDGQRSQVGRWAG Trigger: TCCTGCCCATCTGCCTACCTGACTCCTCTGTCCGTCTCCCTCCCAAGACCGACTGCTGGATTGCCGGCTGGGGAAGCATCCAGGATGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CCA 90 bp | GCTGTGACCACCCAGCGGTTGGTGAGCAGGGAGCCTGCACAGTGGTaGGAGCCATTCTTGAGGATGCTAACAATCCAGGGCCACTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: AVTTQRLVSREPAQW*EPFLRMLTIQGHWA Trigger: TGCCCAGTGGCCCTGGATTGTTAGCATCCTCAAGAATGGCTCCCACCACTGTGCAGGCTCCCTGCTCACCAACCGCTGGGTGGTCACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CCA 90 bp | CTCACCTCCCACAATCCGGTTCAGCTGCTGAGGCTTCCCACAGTCTaGGGACACTCGGATGGTGGCAGCACTGATGGGAGCTGTGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: LTSHNPVQLLRLPTV*GHSDGGSTDGSCGS Trigger: ACTTCCACAGCTCCCATCAGTGCTGCCACCATCCGAGTGTCCCCAGACTGTGGGAAGCCTCAGCAGCTGAACCGGATTGTGGGAGGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CCA 90 bp | AGTCGGTCTTGGGAGGGAGACGGACAGAGGAGTCAGGTAGGCAGATaGGCAGGATCCGCTCAGAGAACTGGATGGAGTGTTCCAGGCGCA | + |
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Preference number: 5 (lower is better) Translates to: SRSWEGDGQRSQVGR*AGSAQRTGWSVPGA Trigger: TGCGCCTGGAACACTCCATCCAGTTCTCTGAGCGGATCCTGCCCATCTGCCTACCTGACTCCTCTGTCCGTCTCCCTCCCAAGACCGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CCA 90 bp | AGGAGTCAGGTAGGCAGATGGGCAGGATCCGCTCAGAGAACTGGATaGAGTGTTCCAGGCGCACCAGGGCAATGTCTGCATGGGTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: RSQVGRWAGSAQRTG*SVPGAPGQCLHGFP Trigger: AGGGAACCCATGCAGACATTGCCCTGGTGCGCCTGGAACACTCCATCCAGTTCTCTGAGCGGATCCTGCCCATCTGCCTACCTGACTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS TCA 90 bp | GCTGAGGCTTCCCACAGTCTGGGGACACTCGGATGGTGGCAGCACTaGTGGGAGCTGTGGAAGTCAGCAGCACCAGAAGGATTAAGATGC | + |
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Preference number: 5 (lower is better) Translates to: AEASHSLGTLGWWQH*WELWKSAAPEGLRC Trigger: GCATCTTAATCCTTCTGGTGCTGCTGACTTCCACAGCTCCCATCAGTGCTGCCACCATCCGAGTGTCCCCAGACTGTGGGAAGCCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS GCA 90 bp | CTCAGAGAACTGGATGGAGTGTTCCAGGCGCACCAGGGCAATGTCTaGATGGGTTCCCTCCTTCCAAGAATACCTGGGGTGAGGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: LRELDGVFQAHQGNV*MGSLLPRIPGVRQH Trigger: GTGCTGCCTCACCCCAGGTATTCTTGGAAGGAGGGAACCCATGCAGACATTGCCCTGGTGCGCCTGGAACACTCCATCCAGTTCTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CAA 90 bp | GAGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGTGACCACCCAGCGGTaGGTGAGCAGGGAGCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: EAHTHTHTHTHTHTESSIVTTQR*VSREPA Trigger: TGCAGGCTCCCTGCTCACCAACCGCTGGGTGGTCAC...AATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGGCCTACTTTCTGGGACCTaGGGCCTGGGCTCCCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTHTQSPRLRGLLSGT*GLGSPA Trigger: AGCTGGGGAGCCCAGGCCCAAGGTCCCAGAAAGTAG...GCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGGCCCCTTGAACGATCCTTaGCACCCAGGAGCGGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTHTQSPRLRGPLNDP*HPGAVS Trigger: GCTCACCGCTCCTGGGTGCAAAGGATCGTTCAAGGG...GCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CAA 90 bp | GAGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTATCCAGCAGTCGGTCTaGGGAGGGAGACGGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: EAHTHTHTHTHTHTESSIIQQSV*GGRRTE Trigger: CTCTGTCCGTCTCCCTCCCAAGACCGACTGCTGGAT...AATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CAA 90 bp | AGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGGCGCAGCTGCACCCCTaGAACGATCCTTTGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: RHTHTHTHTHTHTQSPRLAQLHP*NDPLHP Trigger: TGGGTGCAAAGGATCGTTCAAGGGGTGCAGCTGCGC...CAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CAA 90 bp | GAGGCACACACACACACACACACACACACACACACACACACAGAGTCCTCGATTCGCCAGTACAAGCTTTaGCAGAGTTCGGAGTCGATG | + |
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Preference number: 5 (lower is better) Translates to: EAHTHTHTHTHTHTESSIRQYKL*QSSESM Trigger: CATCGACTCCGAACTCTGCAAAAGCTTGTACTGGCG...AATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACACACACACACACAGAGTCCTCGATTGAGGGGCGAGAACAGAGATGGTTaGTCCATATTGCTCTTAAAG | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTHTHTQSPRLRGENRDG*SILLLK Trigger: CTTTAAGAGCAATATGGACAAACCATCTCTGTTCTC...GCCCCTCAATCGAGGACTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS TCA 72 bp | CGGGCCGGTTGCGCTCCGCGCAGCCCTCTCCCCAGCTaGTTATGCCAGTCAGTAGCCAGTGGTCATCCACCT | + |
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Preference number: 6 (lower is better) Translates to: RAGCAPRSPLPS*LCQSVASGHPP Trigger: AGGTGGATGACCACTGGCTACTGACTGGCATAATCAGCTGGGGAGAGGGCTGCGCGGAGCGCAACCGGCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CAA 90 bp | ACTCCATCCTGGATGCTTCCCCAGCCGGCAATCCAGCAGTCGGTCTaGGGAGGGAGACGGACAGAGGAGTCAGGTAGGCAGATGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TPSWMLPQPAIQQSV*GGRRTEESGRQMGR Trigger: CCTGCCCATCTGCCTACCTGACTCCTCTGTCCGTCTCCCTCCCAAGACCGACTGCTGGATTGCCGGCTGGGGAAGCATCCAGGATGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CCA 72 bp | GGATGCTTCCCCAGCCGGCAATCCAGCAGTCGGTCTTaGGAGGGAGACGGACAGAGGAGTCAGGTAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GCFPSRQSSSRS*EGDGQRSQVGR Trigger: TCTGCCTACCTGACTCCTCTGTCCGTCTCCCTCCCAAGACCGACTGCTGGATTGCCGGCTGGGGAAGCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CAA 90 bp | CAGCGGTTGGTGAGCAGGGAGCCTGCACAGTGGTGGGAGCCATTCTaGAGGATGCTAACAATCCAGGGCCACTGGGCATCCATGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QRLVSREPAQWWEPF*RMLTIQGHWASMLS Trigger: GGACAGCATGGATGCCCAGTGGCCCTGGATTGTTAGCATCCTCAAGAATGGCTCCCACCACTGTGCAGGCTCCCTGCTCACCAACCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS GCA 72 bp | TCCAAGAATACCTGGGGTGAGGCAGCACCCAAGCAATaGCTACTTTCTGGGACCTTGGGCCTGGGCTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SKNTWGEAAPKQ*LLSGTLGLGSP Trigger: TGGGGAGCCCAGGCCCAAGGTCCCAGAAAGTAGGCATTGCTTGGGTGCTGCCTCACCCCAGGTATTCTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CCA 72 bp | ACCCAGCGGTTGGTGAGCAGGGAGCCTGCACAGTGGTaGGAGCCATTCTTGAGGATGCTAACAATCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: TQRLVSREPAQW*EPFLRMLTIQG Trigger: GCCCTGGATTGTTAGCATCCTCAAGAATGGCTCCCACCACTGTGCAGGCTCCCTGCTCACCAACCGCTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS TCA 72 bp | CTGTGGAAGTCAGCAGCACCAGAAGGATTAAGATGCTaGACTGGTCCCCACCCAGTGCTGGGGGAGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LWKSAAPEGLRC*TGPHPVLGEVW Trigger: CCAGACCTCCCCCAGCACTGGGTGGGGACCAGTTCAGCATCTTAATCCTTCTGGTGCTGCTGACTTCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS GCA 72 bp | CTGGATGGAGTGTTCCAGGCGCACCAGGGCAATGTCTaGATGGGTTCCCTCCTTCCAAGAATACCTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LDGVFQAHQGNV*MGSLLPRIPGV Trigger: CACCCCAGGTATTCTTGGAAGGAGGGAACCCATGCAGACATTGCCCTGGTGCGCCTGGAACACTCCATCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CCA 72 bp | GTAGGCAGATGGGCAGGATCCGCTCAGAGAACTGGATaGAGTGTTCCAGGCGCACCAGGGCAATGTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: VGRWAGSAQRTG*SVPGAPGQCLH Trigger: ATGCAGACATTGCCCTGGTGCGCCTGGAACACTCCATCCAGTTCTCTGAGCGGATCCTGCCCATCTGCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CCA 72 bp | TGGGAGGGAGACGGACAGAGGAGTCAGGTAGGCAGATaGGCAGGATCCGCTCAGAGAACTGGATGGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: WEGDGQRSQVGR*AGSAQRTGWSV Trigger: AACACTCCATCCAGTTCTCTGAGCGGATCCTGCCCATCTGCCTACCTGACTCCTCTGTCCGTCTCCCTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS TCA 72 bp | TCTGCATGGGTTCCCTCCTTCCAAGAATACCTGGGGTaGGGCAGCACCCAAGCAATGCCTACTTTCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SAWVPSFQEYLG*GSTQAMPTFWD Trigger: GTCCCAGAAAGTAGGCATTGCTTGGGTGCTGCCTCACCCCAGGTATTCTTGGAAGGAGGGAACCCATGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CAA 90 bp | CTCCCCAGCTTCCAGGCCCCCAACAATACTGAGAACAGAGATGGTTaGTCCATATTGCTCTTAAAGCAGTGCGCGGCTGTGACCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: LPSFQAPNNTENRDG*SILLLKQCAAVTTQ Trigger: CTGGGTGGTCACAGCCGCGCACTGCTTTAAGAGCAATATGGACAAACCATCTCTGTTCTCAGTATTGTTGGGGGCCTGGAAGCTGGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CCA 72 bp | CAATGTCTGCATGGGTTCCCTCCTTCCAAGAATACCTaGGGTGAGGCAGCACCCAAGCAATGCCTACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: QCLHGFPPSKNT*GEAAPKQCLLS Trigger: AGAAAGTAGGCATTGCTTGGGTGCTGCCTCACCCCAGGTATTCTTGGAAGGAGGGAACCCATGCAGACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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| CDS CAA 72 bp | TTCCAGGCCCCCAACAATACTGAGAACAGAGATGGTTaGTCCATATTGCTCTTAAAGCAGTGCGCGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: FQAPNNTENRDG*SILLLKQCAAV Trigger: CACAGCCGCGCACTGCTTTAAGAGCAATATGGACAAACCATCTCTGTTCTCAGTATTGTTGGGGGCCTGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041649.8 |
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