Pregenerated sensors for PRSS21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024116Ensembl transcript IDs: ENSMUST00000024928.4
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGTGACGCTATACGGGAAGGGATaGTCCTGTGACCGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FISKQDTKETHPDLTGVTLYGKG*SCDRRA Trigger: GGCCCTGCGGTCACAGGACCATCCCTTCCCGTATAG...CGTCACACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR GCA 90 bp | AATATTAACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACACGCAGGCTCCCTTaGCACGGCCAGCGGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: NINRFISKQDTKETHPDLTRRLP*HGQRPS Trigger: GCTTGGCCGCTGGCCGTGGCAAGGGAGCCTGCGTGT...GAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTTAATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | ACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGTCCTTTTGGAAGCAGTaGGCAGCTGTAAGCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: TGLLASKIQKRHTLTSQVSFWKQ*AAVSTQ Trigger: CTGGGTGCTTACAGCTGCCCACTGCTTCCAAAAGGA...CACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | ATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGTGACGTACTCCAGAGAGATGGCCTaGATGTCAGCTCACCAAACT | + |
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Preference number: 4 (lower is better) Translates to: ISKQDTKETHPDLTGVTYSREMA*MSAHQT Trigger: AGTTTGGTGAGCTGACATCCAGGCCATCTCTCTGGA...GTACGTCACACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | AACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGCTACCTGCACTTCCTaGAGAGTGTTGGGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: NRFISKQDTKETHPDLTGATCTS*RVLGDG Trigger: GCCATCTCCCAACACTCTCCAGGAAGTGCAGGTAGC...ACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR TCA 90 bp | AACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGTAGGTGACTGGAGATaGCAGCTTCAGCAGGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: NRFISKQDTKETHPDLTGVGDWR*QLQQGY Trigger: ATAGCCCTGCTGAAGCTGTCATCTCCAGTCACCTAC...ACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR GCA 90 bp | ACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGAATAGGTCGGGTTCCTaGAGTTCGGGTTTCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGLLASKIQKRHTLTSQVNRSGS*SSGFSG Trigger: TCCTGAGAAACCCGAACTGCAGGAACCCGACCTATT...CACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | ATATTAACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACACAACCACCAGCAGTaGCACCAACGTCTTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILTGLLASKIQKRHTLTSHNHQQ*HQRLAP Trigger: CGGGGCAAGACGTTGGTGCCACTGCTGGTGGTTGTG...TGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTTAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | AGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGTGCTTCCTGGAGAGTGTTaGGAGATGGCAGACTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RFISKQDTKETHPDLTGVLPGEC*EMADSH Trigger: ATGAGAGTCTGCCATCTCCCAACACTCTCCAGGAAG...CACACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | TTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGTGACGGGATCGTTATCCTTTTaGAAGCAGTGGGCAGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: FISKQDTKETHPDLTGVTGSLSF*KQWAAV Trigger: TACAGCTGCCCACTGCTTCCAAAAGGATAACGATCC...CGTCACACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR TCA 90 bp | ATTAACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACACTCACAACTCCAACCTaGTACCACACCGTATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: INRFISKQDTKETHPDLTLTTPT*YHTVSW Trigger: CCAGGATACGGTGTGGTATCAGGTTGGAGTTGTGAG...TGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR TCA 90 bp | AACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTATTGCGGATCATGGTTaGCTGGATCCAGTTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NRFISKQDTKETHPDLTGIADHG*LDPVVV Trigger: CACTACAACTGGATCCAGTCAACCATGATCCGCAAT...ACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | TTAACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTCAGCTCACCAAACTaGACTGTCCAGTCAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LTGLLASKIQKRHTLTSQVSSPN*TVQSKG Trigger: TCCTTTTGACTGGACAGTCCAGTTTGGTGAGCTGAC...CTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | ATTAACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGAGAGTGTTGGGAGATaGCAGACTCTCATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: INRFISKQDTKETHPDLTESVGR*QTLIFS Trigger: GGAGAAGATGAGAGTCTGCCATCTCCCAACACTCTC...TGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | ACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGGTTCGTGCGGAAGTCTaGCTTTTTGTACATATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGLLASKIQKRHTLTSQVVRAEV*LFVHMV Trigger: AACCATATGTACAAAAAGCCAGACTTCCGCACGAAC...CACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR GCA 90 bp | TTAACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGTTGATAATAGCTACCTaGACTTCCTGGAGAGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LTGLLASKIQKRHTLTSQLIIAT*TSWRVL Trigger: CAACACTCTCCAGGAAGTGCAGGTAGCTATTATCAA...CTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | ATATTAACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCAACTGCTCCGAGTACTTaGGGCTCAGGAAAATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILTGLLASKIQKRHTLTSTAPST*GSGKYL Trigger: AAGATATTTTCCTGAGCCCCAAGTACTCGGAGCAGT...TGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTTAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CCA 90 bp | ATTAACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGCTTTTTGTACATATaGTTACACATGCTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: INRFISKQDTKETHPDLTGFLYI*LHMLLL Trigger: CAACAACAGCATGTGTAACCATATGTACAAAAAGCC...TGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGTTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS GCA 90 bp | GGTCGCAGGCCAAGGGTCCTCCCGAGTCACCAAAGCAGGCATCCTTaGCACCTTCAGGAGTGCCAGCGCAAACCATGTCTCCCCAGATGT | + |
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Preference number: 5 (lower is better) Translates to: GRRPRVLPSHQSRHP*HLQECQRKPCLPRC Trigger: ACATCTGGGGAGACATGGTTTGCGCTGGCACTCCTGAAGGTGGCAAGGATGCCTGCTTTGGTGACTCGGGAGGACCCTTGGCCTGCGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CCA 90 bp | AGCGGCCAAGCTCAGCATCATCGCCACCCACTATACGGGAAGGGATaGTCCTGTGACCGCAGGGCCCTGACAATAGGTCGGGTTCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SGQAQHHRHPLYGKG*SCDRRALTIGRVPA Trigger: TGCAGGAACCCGACCTATTGTCAGGGCCCTGCGGTCACAGGACCATCCCTTCCCGTATAGTGGGTGGCGATGATGCTGAGCTTGGCCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS GCA 90 bp | AAGGTTGCGCCACATAAGTGGTTGCCCCATACACGCAGGCTCCCTTaGCACGGCCAGCGGCCAAGCTCAGCATCATCGCCACCCACTATA | + |
|
Preference number: 5 (lower is better) Translates to: KVAPHKWLPHTRRLP*HGQRPSSASSPPTI Trigger: TATAGTGGGTGGCGATGATGCTGAGCTTGGCCGCTGGCCGTGGCAAGGGAGCCTGCGTGTATGGGGCAACCACTTATGTGGCGCAACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS GCA 90 bp | GTCCTCCCGAGTCACCAAAGCAGGCATCCTTGCCACCTTCAGGAGTaGCAGCGCAAACCATGTCTCCCCAGATGTTCGTGCGGAAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: VLPSHQSRHPCHLQE*QRKPCLPRCSCGSL Trigger: CAGACTTCCGCACGAACATCTGGGGAGACATGGTTTGCGCTGGCACTCCTGAAGGTGGCAAGGATGCCTGCTTTGGTGACTCGGGAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CAA 90 bp | ACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGTACACGCAGGCTCCCTaGCCACGGCCAGCGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: TGLLASKIQKRHTLTSQVYTQAP*PRPAAK Trigger: CTTGGCCGCTGGCCGTGGCAAGGGAGCCTGCGTGTA...CACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS TCA 90 bp | GCCCATTGCGGATCATGGTTGACTGGATCCAGTTGTAGTGATGACTaGTGTTGGTATAGACTCCAGGGCGATTGGGGCGACCACAGCCTA | + |
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Preference number: 5 (lower is better) Translates to: AHCGSWLTGSSCSDD*CWYRLQGDWGDHSL Trigger: TAGGCTGTGGTCGCCCCAATCGCCCTGGAGTCTATACCAACATCAGTCATCACTACAACTGGATCCAGTCAACCATGATCCGCAATGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CAA 90 bp | ACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGGGCCTGAGCAGCCCATaGCGGATCATGGTTGACTGG | + |
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Preference number: 5 (lower is better) Translates to: TGLLASKIQKRHTLTSQVGLSSP*RIMVDW Trigger: CCAGTCAACCATGATCCGCAATGGGCTGCTCAGGCC...CACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS GCA 90 bp | CACCTTCAGGAGTGCCAGCGCAAACCATGTCTCCCCAGATGTTCGTaGGGAAGTCTGGCTTTTTGTACATATGGTTACACATGCTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: HLQECQRKPCLPRCS*GSLAFCTYGYTCCC Trigger: ACAACAGCATGTGTAACCATATGTACAAAAAGCCAGACTTCCGCACGAACATCTGGGGAGACATGGTTTGCGCTGGCACTCCTGAAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CAA 90 bp | ACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGCCAAAGCAGGCATCCTaGCCACCTTCAGGAGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: TGLLASKIQKRHTLTSQVPKQAS*PPSGVP Trigger: TGGCACTCCTGAAGGTGGCAAGGATGCCTGCTTTGG...CACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CCA 90 bp | ACAGCTTCAGCAGGGCTATGTCATTGGGATACTGCTCCGAGTACTTaGGGCTCAGGAAAATATCTTCTATTTGGTAACGGTTGGAATAGG | + |
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Preference number: 5 (lower is better) Translates to: TASAGLCHWDTAPST*GSGKYLLFGNGWNR Trigger: CCTATTCCAACCGTTACCAAATAGAAGATATTTTCCTGAGCCCCAAGTACTCGGAGCAGTATCCCAATGACATAGCCCTGCTGAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CCA 90 bp | AGTGCCAGCGCAAACCATGTCTCCCCAGATGTTCGTGCGGAAGTCTaGCTTTTTGTACATATGGTTACACATGCTGTTGTTGATAATAGC | + |
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Preference number: 5 (lower is better) Translates to: SASANHVSPDVRAEV*LFVHMVTHAVVDNS Trigger: GCTATTATCAACAACAGCATGTGTAACCATATGTACAAAAAGCCAGACTTCCGCACGAACATCTGGGGAGACATGGTTTGCGCTGGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CAA 90 bp | ACAGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGAGGATCGTTATCCTTTaGGAAGCAGTGGGCAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: TGLLASKIQKRHTLTSQVRIVIL*EAVGSC Trigger: ACAGCTGCCCACTGCTTCCAAAAGGATAACGATCCT...CACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CAA 90 bp | ATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGTGACGTACTACTGCTCCGAGTACTaGGGGCTCAGGAAAATATCT | + |
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Preference number: 5 (lower is better) Translates to: ISKQDTKETHPDLTGVTYYCSEY*GLRKIS Trigger: AGATATTTTCCTGAGCCCCAAGTACTCGGAGCAGTA...GTACGTCACACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CCA 90 bp | ATATGGTTACACATGCTGTTGTTGATAATAGCTACCTGCACTTCCTaGAGAGTGTTGGGAGATGGCAGACTCTCATCTTCTCCAATAGCC | + |
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Preference number: 5 (lower is better) Translates to: IWLHMLLLIIATCTS*RVLGDGRLSSSPIA Trigger: GGCTATTGGAGAAGATGAGAGTCTGCCATCTCCCAACACTCTCCAGGAAGTGCAGGTAGCTATTATCAACAACAGCATGTGTAACCATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CAA 90 bp | ATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGTGACGTACGAAAATATCTTCTATTaGGTAACGGTTGGAATAGGC | + |
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Preference number: 5 (lower is better) Translates to: ISKQDTKETHPDLTGVTYENIFY*VTVGIG Trigger: GCCTATTCCAACCGTTACCAAATAGAAGATATTTTC...GTACGTCACACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS-3UTR CAA 90 bp | AGGTTTATTAGCAAGCAAGATACAAAAGAGACACACCCTGACCTCACAGGTGTGTTACACATGCTGTTGTaGATAATAGCTACCTGCACT | + |
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Preference number: 5 (lower is better) Translates to: RFISKQDTKETHPDLTGVLHMLL*IIATCT Trigger: AGTGCAGGTAGCTATTATCAACAACAGCATGTGTAA...CACACCTGTGAGGTCAGGGTGTGTCTCTTTTGTATCTTGCTTGCTAATAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CCA 72 bp | ACCCAGCGGCGGTTGAGCAAGGTTGCGCCACATAAGTaGTTGCCCCATACACGCAGGCTCCCTTGCCACGGC | + |
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Preference number: 6 (lower is better) Translates to: TQRRLSKVAPHK*LPHTRRLPCHG Trigger: GCCGTGGCAAGGGAGCCTGCGTGTATGGGGCAACCACTTATGTGGCGCAACCTTGCTCAACCGCCGCTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CAA 72 bp | CAGCGGCGGTTGAGCAAGGTTGCGCCACATAAGTGGTaGCCCCATACACGCAGGCTCCCTTGCCACGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: QRRLSKVAPHKW*PHTRRLPCHGQ Trigger: CTGGCCGTGGCAAGGGAGCCTGCGTGTATGGGGCAACCACTTATGTGGCGCAACCTTGCTCAACCGCCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS GCA 72 bp | CCACATAAGTGGTTGCCCCATACACGCAGGCTCCCTTaGCACGGCCAGCGGCCAAGCTCAGCATCATCGCCA | + |
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Preference number: 6 (lower is better) Translates to: PHKWLPHTRRLP*HGQRPSSASSP Trigger: TGGCGATGATGCTGAGCTTGGCCGCTGGCCGTGGCAAGGGAGCCTGCGTGTATGGGGCAACCACTTATGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CAA 90 bp | TGGTCGCAGGCCAAGGGTCCTCCCGAGTCACCAAAGCAGGCATCCTaGCCACCTTCAGGAGTGCCAGCGCAAACCATGTCTCCCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: WSQAKGPPESPKQAS*PPSGVPAQTMSPQM Trigger: CATCTGGGGAGACATGGTTTGCGCTGGCACTCCTGAAGGTGGCAAGGATGCCTGCTTTGGTGACTCGGGAGGACCCTTGGCCTGCGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CCA 72 bp | GCTCAGCATCATCGCCACCCACTATACGGGAAGGGATaGTCCTGTGACCGCAGGGCCCTGACAATAGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: AQHHRHPLYGKG*SCDRRALTIGR Trigger: CCGACCTATTGTCAGGGCCCTGCGGTCACAGGACCATCCCTTCCCGTATAGTGGGTGGCGATGATGCTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS GCA 72 bp | CCAAGGGTCCTCCCGAGTCACCAAAGCAGGCATCCTTaGCACCTTCAGGAGTGCCAGCGCAAACCATGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PRVLPSHQSRHP*HLQECQRKPCL Trigger: GAGACATGGTTTGCGCTGGCACTCCTGAAGGTGGCAAGGATGCCTGCTTTGGTGACTCGGGAGGACCCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CAA 72 bp | GCCAAGGGTCCTCCCGAGTCACCAAAGCAGGCATCCTaGCCACCTTCAGGAGTGCCAGCGCAAACCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: AKGPPESPKQAS*PPSGVPAQTMS Trigger: AGACATGGTTTGCGCTGGCACTCCTGAAGGTGGCAAGGATGCCTGCTTTGGTGACTCGGGAGGACCCTTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS GCA 72 bp | AGTCACCAAAGCAGGCATCCTTGCCACCTTCAGGAGTaGCAGCGCAAACCATGTCTCCCCAGATGTTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: SHQSRHPCHLQE*QRKPCLPRCSC Trigger: GCACGAACATCTGGGGAGACATGGTTTGCGCTGGCACTCCTGAAGGTGGCAAGGATGCCTGCTTTGGTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS TCA 72 bp | TGGGTCAGGCCTGAGCAGCCCATTGCGGATCATGGTTaGCTGGATCCAGTTGTAGTGATGACTGATGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: WVRPEQPIADHG*LDPVVVMTDVG Trigger: ACCAACATCAGTCATCACTACAACTGGATCCAGTCAACCATGATCCGCAATGGGCTGCTCAGGCCTGACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CAA 72 bp | GTGACTGGAGATGACAGCTTCAGCAGGGCTATGTCATaGGGATACTGCTCCGAGTACTTGGGGCTCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: VTGDDSFSRAMS*GYCSEYLGLRK Trigger: TTTCCTGAGCCCCAAGTACTCGGAGCAGTATCCCAATGACATAGCCCTGCTGAAGCTGTCATCTCCAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS GCA 72 bp | GAGTGCCAGCGCAAACCATGTCTCCCCAGATGTTCGTaGGGAAGTCTGGCTTTTTGTACATATGGTTACACA | + |
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Preference number: 6 (lower is better) Translates to: ECQRKPCLPRCS*GSLAFCTYGYT Trigger: TGTGTAACCATATGTACAAAAAGCCAGACTTCCGCACGAACATCTGGGGAGACATGGTTTGCGCTGGCACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CAA 90 bp | GTGCGGAAGTCTGGCTTTTTGTACATATGGTTACACATGCTGTTGTaGATAATAGCTACCTGCACTTCCTGGAGAGTGTTGGGAGATGGC | + |
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Preference number: 6 (lower is better) Translates to: VRKSGFLYIWLHMLL*IIATCTSWRVLGDG Trigger: GCCATCTCCCAACACTCTCCAGGAAGTGCAGGTAGCTATTATCAACAACAGCATGTGTAACCATATGTACAAAAAGCCAGACTTCCGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CAA 90 bp | GCGCAAACCATGTCTCCCCAGATGTTCGTGCGGAAGTCTGGCTTTTaGTACATATGGTTACACATGCTGTTGTTGATAATAGCTACCTGC | + |
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Preference number: 6 (lower is better) Translates to: AQTMSPQMFVRKSGF*YIWLHMLLLIIATC Trigger: GCAGGTAGCTATTATCAACAACAGCATGTGTAACCATATGTACAAAAAGCCAGACTTCCGCACGAACATCTGGGGAGACATGGTTTGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CCA 72 bp | GCAGGGCTATGTCATTGGGATACTGCTCCGAGTACTTaGGGCTCAGGAAAATATCTTCTATTTGGTAACGGT | + |
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Preference number: 6 (lower is better) Translates to: AGLCHWDTAPST*GSGKYLLFGNG Trigger: ACCGTTACCAAATAGAAGATATTTTCCTGAGCCCCAAGTACTCGGAGCAGTATCCCAATGACATAGCCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CCA 72 bp | GCAAACCATGTCTCCCCAGATGTTCGTGCGGAAGTCTaGCTTTTTGTACATATGGTTACACATGCTGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: ANHVSPDVRAEV*LFVHMVTHAVV Trigger: AACAACAGCATGTGTAACCATATGTACAAAAAGCCAGACTTCCGCACGAACATCTGGGGAGACATGGTTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CAA 90 bp | TTCGTGCGGAAGTCTGGCTTTTTGTACATATGGTTACACATGCTGTaGTTGATAATAGCTACCTGCACTTCCTGGAGAGTGTTGGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: FVRKSGFLYIWLHML*LIIATCTSWRVLGD Trigger: ATCTCCCAACACTCTCCAGGAAGTGCAGGTAGCTATTATCAACAACAGCATGTGTAACCATATGTACAAAAAGCCAGACTTCCGCACGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CCA 72 bp | CAGATGTTCGTGCGGAAGTCTGGCTTTTTGTACATATaGTTACACATGCTGTTGTTGATAATAGCTACCTGC | + |
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Preference number: 6 (lower is better) Translates to: QMFVRKSGFLYI*LHMLLLIIATC Trigger: GCAGGTAGCTATTATCAACAACAGCATGTGTAACCATATGTACAAAAAGCCAGACTTCCGCACGAACATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CAA 72 bp | TCTGGCTTTTTGTACATATGGTTACACATGCTGTTGTaGATAATAGCTACCTGCACTTCCTGGAGAGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SGFLYIWLHMLL*IIATCTSWRVL Trigger: CAACACTCTCCAGGAAGTGCAGGTAGCTATTATCAACAACAGCATGTGTAACCATATGTACAAAAAGCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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| CDS CAA 72 bp | AAGTCTGGCTTTTTGTACATATGGTTACACATGCTGTaGTTGATAATAGCTACCTGCACTTCCTGGAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: KSGFLYIWLHML*LIIATCTSWRV Trigger: CACTCTCCAGGAAGTGCAGGTAGCTATTATCAACAACAGCATGTGTAACCATATGTACAAAAAGCCAGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024928.4 |
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