Pregenerated sensors for PRSS16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006179Ensembl transcript IDs: ENSMUST00000006341.4, ENSMUST00000150547.3
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTATCTGGGAGAAGGCGGCTCCAGCATGGAAAGCCACATTCCCCTaGCATTTACCATACAGAATATCACTACCTACAAAGGACAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: LIWEKAAPAWKATFP*HLPYRISLPTKDSN Trigger: ATTACTGTCCTTTGTAGGTAGTGATATTCTGTATGGTAAATGTCAGGGGAATGTGGCTTTCCATGCTGGAGCCGCCTTCTCCCAGATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| 3UTR TCA 90 bp | TTCAACTACCACAGACTAAAACTCAGGAGAGACAGAGTCAGGATGTaGAGAGTTCTATGCAGTAGGTGCCAGTCAAGAATGAAGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: FNYHRLKLRRDRVRM*RVLCSRCQSRMKRQ Trigger: CTGTCTCTTCATTCTTGACTGGCACCTACTGCATAGAACTCTTCACATCCTGACTCTGTCTCTCCTGAGTTTTAGTCTGTGGTAGTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| 3UTR GCA 90 bp | ATTTCAGGCGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTaGTCAAAGGTAGTCAGTCAGTCCAGGGTTATGTTTCCATGTGAT | + |
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Preference number: 1 (lower is better) Translates to: ISGGSFLFSITLLKT*SKVVSQSRVMFPCD Trigger: ATCACATGGAAACATAACCCTGGACTGACTGACTACCTTTGAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCGCCTGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| 3UTR-3UTR GCA 90 bp | GAGAACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTAGAAAAATGCCAGGATaGAGTTCCTGTGATGGGACT | + |
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Preference number: 2 (lower is better) Translates to: ENKQAEQALSPTSRNFLLRKMPG*SSCDGT Trigger: AGTCCCATCACAGGAACTGCATCCTGGCATTTTTCT...AAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| 3UTR-3UTR GCA 90 bp | GAGAACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTTACAGTGAAGAAAAATaGCAGGATGCAGTTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: ENKQAEQALSPTSRNFLLYSEEK*QDAVPV Trigger: CACAGGAACTGCATCCTGGCATTTTTCTTCACTGTA...AAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| 3UTR-3UTR GCA 90 bp | AACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCATACAGTGAAGAAAAATaGCAGGATGCAGTTCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: NKQAEQALSPTSRNFLLPYSEEK*QDAVPV Trigger: CACAGGAACTGCATCCTGGCATTTTTCTTCACTGTA...TGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGACAGAATTTAAGCCAGGTTCTTATCTGGGAGAAGGCGGCTCCAGCATGTTTTCTCTTCTACAGTaGAGAAAAATGCCAGGATGC | + |
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Preference number: 2 (lower is better) Translates to: EETEFKPGSYLGEGGSSMFSLLQ*RKMPGC Trigger: GCATCCTGGCATTTTTCTTCACTGTAGAAGAGAAAA...CATGCTGGAGCCGCCTTCTCCCAGATAAGAACCTGGCTTAAATTCTGTCTCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCAAAGGTAGTCAGTCAGGACAGAGTCAGGATGTaGAGAGTTCTATGCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: SFLFSITLLKTCSKVVSQDRVRM*RVLCSR Trigger: CCTACTGCATAGAACTCTTCACATCCTGACTCTGTC...CTGACTGACTACCTTTGAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGCCACATTCCCCTGACATTTACCATACAGAATATCACTACCTACAAAGGGCAATGAAGATAAATTaGGAACAAGCAGGCAGAACA | + |
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Preference number: 2 (lower is better) Translates to: GKPHSPDIYHTEYHYLQRAMKIN*EQAGRT Trigger: TGTTCTGCCTGCTTGTTCTCAATTTATCTTCATTGC...CCTTTGTAGGTAGTGATATTCTGTATGGTAAATGTCAGGGGAATGTGGCTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| 3UTR-3UTR GCA 90 bp | CATGTGATTCTAAATTCAGGTAGGCTGACAATGAAGTTCAACTACCACAGACTAAGAAAAATGCCAGGATaGAGTTCCTGTGATGGGACT | + |
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Preference number: 2 (lower is better) Translates to: HVILNSGRLTMKFNYHRLRKMPG*SSCDGT Trigger: AGTCCCATCACAGGAACTGCATCCTGGCATTTTTCT...TAGTCTGTGGTAGTTGAACTTCATTGTCAGCCTACCTGAATTTAGAATCACATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| 3UTR-3UTR TCA 90 bp | ATTCTAAATTCAGGTAGGCTGACAATGAAGTTCAACTACCACAGACTAAAACTCAAAGCCACATTCCCCTaGCATTTACCATACAGAATA | + |
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Preference number: 2 (lower is better) Translates to: ILNSGRLTMKFNYHRLKLKATFP*HLPYRI Trigger: TATTCTGTATGGTAAATGTCAGGGGAATGTGGCTTT...GAGTTTTAGTCTGTGGTAGTTGAACTTCATTGTCAGCCTACCTGAATTTAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| 3UTR CAA 90 bp | CATTTACCATACAGAATATCACTACCTACAAAGGACAGTAATCATTaGCCTACATTTATACTAATCCGTGACAAAGAACTTCTAGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: HLPYRISLPTKDSNH*PTFILIRDKELLVG Trigger: GCCAACTAGAAGTTCTTTGTCACGGATTAGTATAAATGTAGGCAAATGATTACTGTCCTTTGTAGGTAGTGATATTCTGTATGGTAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| 3UTR TCA 72 bp | GAAGATAAATTGAGAACAAGCAGGCAGAACAGGCACTaGGTCCCACGTCTAGGAACTTCCTCCTTCCAAACA | + |
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Preference number: 3 (lower is better) Translates to: EDKLRTSRQNRH*VPRLGTSSFQT Trigger: TGTTTGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTTCTCAATTTATCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| 3UTR TCA 72 bp | GAGAAGGCGGCTCCAGCATGGAAAGCCACATTCCCCTaGCATTTACCATACAGAATATCACTACCTACAAAG | + |
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Preference number: 3 (lower is better) Translates to: EKAAPAWKATFP*HLPYRISLPTK Trigger: CTTTGTAGGTAGTGATATTCTGTATGGTAAATGTCAGGGGAATGTGGCTTTCCATGCTGGAGCCGCCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| 3UTR-3UTR CAA 90 bp | TCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCAAAGGTAGTCAGTCAGGGCAATGAAGATAAATaGAGAACAAGCAGGCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: SFLFSITLLKTCSKVVSQGNEDK*RTSRQN Trigger: GTTCTGCCTGCTTGTTCTCAATTTATCTTCATTGCC...CTGACTGACTACCTTTGAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR GCA 90 bp | GAGAACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAGGCAGGGGCCAGTaGCGCAGGATGCCCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ENKQAEQALSPTSRNFLLPGRGQ*RRMPCH Trigger: ATGGCAGGGCATCCTGCGGCACTGGCCCCTGCCTGG...AAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CCA 90 bp | CAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAACAGCTGTTTTCTCAGGAGACCGCAGAGCTaGCGCACGCTTAGCGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: QALSPTSRNFLLPNSCFLRRPQS*RTLSGA Trigger: AGCGCCGCTAAGCGTGCGCCAGCTCTGCGGTCTCCT...GAGAAAACAGCTGTTTGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR TCA 90 bp | GAGAACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTGTTCCCTCAGGCGCCTaGGAAGCAAGGCTGGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: ENKQAEQALSPTSRNFLLVPSGA*EARLEL Trigger: CAACTCCAGCCTTGCTTCTCAGGCGCCTGAGGGAAC...AAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR GCA 90 bp | GAGAACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTGTCTGGTACAACCACTaGCGGTCCCCCACACCAGAC | + |
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Preference number: 4 (lower is better) Translates to: ENKQAEQALSPTSRNFLLVWYNH*RSPTPD Trigger: GTCTGGTGTGGGGGACCGGCAGTGGTTGTACCAGAC...AAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR GCA 90 bp | AACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAGTCTGGTACAACCACTaGCGGTCCCCCACACCAGAC | + |
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Preference number: 4 (lower is better) Translates to: NKQAEQALSPTSRNFLLPVWYNH*RSPTPD Trigger: GTCTGGTGTGGGGGACCGGCAGTGGTTGTACCAGAC...TGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR TCA 90 bp | GAGAACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTGAGGCTGGGAGAGTCTaGAGGCCTCATAGGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ENKQAEQALSPTSRNFLLEAGRV*RPHRCH Trigger: ATGGCACCTATGAGGCCTTCAGACTCTCCCAGCCTC...AAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR GCA 90 bp | CAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAACAGCTGTTTTCTCGGTGTTGCTCAGCTGTaGCACTGTCTCTGCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: QALSPTSRNFLLPNSCFLGVAQL*HCLCPG Trigger: TCCCGGGCAGAGACAGTGGCACAGCTGAGCAACACC...GAGAAAACAGCTGTTTGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR CCA 90 bp | AACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCATCACACAGCTCTAGCTaGAAGGGCAGTGCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NKQAEQALSPTSRNFLLPSHSSS*KGSAGS Trigger: GCTCCCAGCACTGCCCTTCCAGCTAGAGCTGTGTGA...TGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR GCA 90 bp | CACCATTTCAGGCGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCCGTCGTACTGCACGGTaGCGCCCACCAGCGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HHFRRVFPLQYNFTENVLRRTAR*RPPAPA Trigger: TGCAGGCGCTGGTGGGCGGCACCGTGCAGTACGACG...GAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCGCCTGAAATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR GCA 90 bp | CTATGCAGTAGGTGCCAGTCAAGAATGAAGAGACAGAATTTAAGCCAGGTTCTTAGCGGCGCTCCCGCCTaGCCGTCGTACTGCACGGTG | + |
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Preference number: 4 (lower is better) Translates to: LCSRCQSRMKRQNLSQVLSGAPA*PSYCTV Trigger: CACCGTGCAGTACGACGGGCAGGCGGGAGCGCCGCT...AAGAACCTGGCTTAAATTCTGTCTCTTCATTCTTGACTGGCACCTACTGCATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR GCA 90 bp | AACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCACTTGCGGTTCGGTGTTaGTCAGCTGTGCCACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: NKQAEQALSPTSRNFLLPLAVRC*SAVPLS Trigger: AGACAGTGGCACAGCTGAGCAACACCGAACCGCAAG...TGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR CCA 90 bp | GAAGAGACAGAATTTAAGCCAGGTTCTTATCTGGGAGAAGGCGGCTCCAGCATGACAGCCCCAGGACCATaGCCTAGTCCAAAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: EETEFKPGSYLGEGGSSMTAPGP*PSPKPG Trigger: CCCAGGCTTTGGACTAGGCCATGGTCCTGGGGCTGT...CATGCTGGAGCCGCCTTCTCCCAGATAAGAACCTGGCTTAAATTCTGTCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR TCA 90 bp | GTTACCACCATTTCAGGCGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGAGCGCTCAGCGGTGCTaGGGAGGCGACGGCGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: VTTISGGSFLFSITLLKTSAQRC*GGDGGK Trigger: TTTGCCGCCGTCGCCTCCTCAGCACCGCTGAGCGCT...CGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCGCCTGAAATGGTGGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR GCA 90 bp | CAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAACAGCTGTTTTCTCCTTGCGGTTCGGTGTTaGTCAGCTGTGCCACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: QALSPTSRNFLLPNSCFLLAVRC*SAVPLS Trigger: AGACAGTGGCACAGCTGAGCAACACCGAACCGCAAG...GAGAAAACAGCTGTTTGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR CCA 90 bp | AACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAACTCAGTGCATGTCTaGTACAACCACTGCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: NKQAEQALSPTSRNFLLPNSVHV*YNHCRS Trigger: GGACCGGCAGTGGTTGTACCAGACATGCACTGAGTT...TGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR CCA 90 bp | CAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAACAGCTGTTTTCTCCAAACAGTACTTGGGTaGCTCCAGGGCTCTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: QALSPTSRNFLLPNSCFLQTVLG*LQGSDH Trigger: GTGGTCAGAGCCCTGGAGCCACCCAAGTACTGTTTG...GAGAAAACAGCTGTTTGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR TCA 90 bp | CAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAACAGCTGTTTTCTCGGCAACAGATGCAGGTaGGAGGCCAAACACTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: QALSPTSRNFLLPNSCFLGNRCR*EAKHLF Trigger: GAACAAGTGTTTGGCCTCTCACCTGCATCTGTTGCC...GAGAAAACAGCTGTTTGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR TCA 90 bp | AACTCAGGAGAGACAGAGTCAGGATGTGAAGAGTTCTATGCAGTAGGTGCCAGTAAGCAAGGCTGGAGTTaGCAGTCCCCAGAGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: NSGETESGCEEFYAVGASKQGWS*QSPEGN Trigger: GTTTCCCTCTGGGGACTGTCAACTCCAGCCTTGCTT...ACTGGCACCTACTGCATAGAACTCTTCACATCCTGACTCTGTCTCTCCTGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR TCA 90 bp | CAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAACAGCTGTTTTCTCTGGGAAAAAGGACACTaGAGACCCTCACAGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: QALSPTSRNFLLPNSCFLWEKGH*RPSQVT Trigger: TGTCACCTGTGAGGGTCTTCAGTGTCCTTTTTCCCA...GAGAAAACAGCTGTTTGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR GCA 90 bp | CAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAACAGCTGTTTTCTCGGTTCGTCTGTCAGATaGATTGAAGGGATCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QALSPTSRNFLLPNSCFLGSSVR*IEGIQW Trigger: CCACTGGATCCCTTCAATGCATCTGACAGACGAACC...GAGAAAACAGCTGTTTGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR GCA 90 bp | TACCACCATTTCAGGCGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGGCCAGTGCCGCAGGATaGCCTGCCATCACTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: YHHFRRVFPLQYNFTENVASAAG*PAITEP Trigger: TGGCTCAGTGATGGCAGGGCATCCTGCGGCACTGGC...CACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCGCCTGAAATGGTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR GCA 90 bp | GGAAAGCCACATTCCCCTGACATTTACCATACAGAATATCACTACCTACAAAGGGGTGTTGCTCAGCTGTaGCACTGTCTCTGCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: GKPHSPDIYHTEYHYLQRGVAQL*HCLCPG Trigger: TCCCGGGCAGAGACAGTGGCACAGCTGAGCAACACC...CCTTTGTAGGTAGTGATATTCTGTATGGTAAATGTCAGGGGAATGTGGCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CCA 90 bp | AACTCAGGAGAGACAGAGTCAGGATGTGAAGAGTTCTATGCAGTAGGTGCCAGTCTTGTGTCAGGCTTCTaGCCACCACCTGGTTATAGG | + |
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Preference number: 4 (lower is better) Translates to: NSGETESGCEEFYAVGASLVSGF*PPPGYR Trigger: CCTATAACCAGGTGGTGGCCAGAAGCCTGACACAAG...ACTGGCACCTACTGCATAGAACTCTTCACATCCTGACTCTGTCTCTCCTGAGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR TCA 90 bp | CGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCAAAGGTAGTCAGTGGAAGAAGACACATTaGGGAGGCCGGAGAGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: RVFPLQYNFTENVLKGSQWKKTH*GGRRAP Trigger: AGGCGCTCTCCGGCCTCCTCAATGTGTCTTCTTCCA...CTGACTACCTTTGAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR TCA 90 bp | TACCACCATTTCAGGCGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGGAGGCTGGGAGAGTCTaGAGGCCTCATAGGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: YHHFRRVFPLQYNFTENVEAGRV*RPHRCH Trigger: ATGGCACCTATGAGGCCTTCAGACTCTCCCAGCCTC...CACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCGCCTGAAATGGTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR GCA 90 bp | GAAGAGACAGAATTTAAGCCAGGTTCTTATCTGGGAGAAGGCGGCTCCAGCATGCCCTCGCCTCCTATGTaGAGAAATACTGGTACATCT | + |
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Preference number: 4 (lower is better) Translates to: EETEFKPGSYLGEGGSSMPSPPM*RNTGTS Trigger: AGATGTACCAGTATTTCTGCACATAGGAGGCGAGGG...CATGCTGGAGCCGCCTTCTCCCAGATAAGAACCTGGCTTAAATTCTGTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR TCA 90 bp | GGCGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCAAAGGTAGTCTGGCCAGTTCTGTGTTaGTCATTCACCCAGTACCGC | + |
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Preference number: 4 (lower is better) Translates to: GGSFLFSITLLKTCSKVVWPVLC*SFTQYR Trigger: GCGGTACTGGGTGAATGATCAACACAGAACTGGCCA...GACTACCTTTGAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR GCA 90 bp | ATTCTAAATTCAGGTAGGCTGACAATGAAGTTCAACTACCACAGACTAAAACTCAGCCAGGCCCAAGGCTaGCCTCGCCTCCTATGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ILNSGRLTMKFNYHRLKLSQAQG*PRLLCA Trigger: TGCACATAGGAGGCGAGGGCAGCCTTGGGCCTGGCT...GAGTTTTAGTCTGTGGTAGTTGAACTTCATTGTCAGCCTACCTGAATTTAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CCA 90 bp | TACCACCATTTCAGGCGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCAAACAGTACTTGGGTaGCTCCAGGGCTCTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: YHHFRRVFPLQYNFTENVQTVLG*LQGSDH Trigger: GTGGTCAGAGCCCTGGAGCCACCCAAGTACTGTTTG...CACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCGCCTGAAATGGTGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR TCA 90 bp | CACCATTTCAGGCGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCTGGGAAAAAGGACACTaGAGACCCTCACAGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HHFRRVFPLQYNFTENVLWEKGH*RPSQVT Trigger: TGTCACCTGTGAGGGTCTTCAGTGTCCTTTTTCCCA...GAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCGCCTGAAATGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CCA 90 bp | CATGTGATTCTAAATTCAGGTAGGCTGACAATGAAGTTCAACTACCACAGACTATCACACAGCTCTAGCTaGAAGGGCAGTGCTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HVILNSGRLTMKFNYHRLSHSSS*KGSAGS Trigger: GCTCCCAGCACTGCCCTTCCAGCTAGAGCTGTGTGA...TAGTCTGTGGTAGTTGAACTTCATTGTCAGCCTACCTGAATTTAGAATCACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CCA 90 bp | GGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCAAAGGTAGTCAGTAACTCAGTGCATGTCTaGTACAACCACTGCCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSFLFSITLLKTCSKVVSNSVHV*YNHCRS Trigger: GGACCGGCAGTGGTTGTACCAGACATGCACTGAGTT...ACTGACTACCTTTGAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR TCA 90 bp | TGTTTCCATGTGATTCTAAATTCAGGTAGGCTGACAATGAAGTTCAACTACCACGGCAACAGATGCAGGTaGGAGGCCAAACACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CFHVILNSGRLTMKFNYHGNRCR*EAKHLF Trigger: GAACAAGTGTTTGGCCTCTCACCTGCATCTGTTGCC...GTGGTAGTTGAACTTCATTGTCAGCCTACCTGAATTTAGAATCACATGGAAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR GCA 90 bp | GGAAAGCCACATTCCCCTGACATTTACCATACAGAATATCACTACCTACAAAGGAACACTTCTGTCCCATaGTGCGCAAGACTATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GKPHSPDIYHTEYHYLQRNTSVP*CARLSV Trigger: TACAGATAGTCTTGCGCAGCATGGGACAGAAGTGTT...CCTTTGTAGGTAGTGATATTCTGTATGGTAAATGTCAGGGGAATGTGGCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS GCA 90 bp | CAGAGCTGGCGCACGCTTAGCGGCGCTCCCGCCTGCCCGTCGTACTaGACGGTGCCGCCCACCAGCGCCTGCAACGCTCCCAGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSWRTLSGAPACPSY*TVPPTSACNAPSSS Trigger: GGAGCTGCTGGGAGCGTTGCAGGCGCTGGTGGGCGGCACCGTGCAGTACGACGGGCAGGCGGGAGCGCCGCTAAGCGTGCGCCAGCTCTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS GCA 90 bp | AGCAGGAGACCGCAGAGCTGGCGCACGCTTAGCGGCGCTCCCGCCTaGCCGTCGTACTGCACGGTGCCGCCCACCAGCGCCTGCAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRRPQSWRTLSGAPA*PSYCTVPPTSACNA Trigger: AGCGTTGCAGGCGCTGGTGGGCGGCACCGTGCAGTACGACGGGCAGGCGGGAGCGCCGCTAAGCGTGCGCCAGCTCTGCGGTCTCCTGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS CCA 90 bp | GAGCGGCTGCGGTTTCCCCACTTCCCGAGCAGGAGACCGCAGAGCTaGCGCACGCTTAGCGGCGCTCCCGCCTGCCCGTCGTACTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: ERLRFPHFPSRRPQS*RTLSGAPACPSYCT Trigger: CGTGCAGTACGACGGGCAGGCGGGAGCGCCGCTAAGCGTGCGCCAGCTCTGCGGTCTCCTGCTCGGGAAGTGGGGAAACCGCAGCCGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS GCA 90 bp | CTATCTGTACAGCCCGGCGAAGCCCCAAGTAGGGCGTGGAGCGGCTaGGGTTTCCCCACTTCCCGAGCAGGAGACCGCAGAGCTGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSVQPGEAPSRAWSG*GFPTSRAGDRRAGA Trigger: TGCGCCAGCTCTGCGGTCTCCTGCTCGGGAAGTGGGGAAACCGCAGCCGCTCCACGCCCTACTTGGGGCTTCGCCGGGCTGTACAGATAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS TCA 90 bp | CGTAGGAGCCTCCGAAGCAGATCCAAGGGCTGGAAGAAGACACATTaGGGAGGCCGGAGAGCGCCTGGCGAGCGGAAGCCACGTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRSLRSRSKGWKKTH*GGRRAPGERKPRQP Trigger: TGGCTGACGTGGCTTCCGCTCGCCAGGCGCTCTCCGGCCTCCTCAATGTGTCTTCTTCCAGCCCTTGGATCTGCTTCGGAGGCTCCTACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS TCA 90 bp | CTCCACCTCCGTGAAGGCGGTGGAGGCCGCCGCCAGACACTCCAATaGTCCTCCTATGGCGACTTGTGTCAGGCTTCTGGCCACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHLREGGGGRRQTLQ*SSYGDLCQASGHHL Trigger: CAGGTGGTGGCCAGAAGCCTGACACAAGTCGCCATAGGAGGATCATTGGAGTGTCTGGCGGCGGCCTCCACCGCCTTCACGGAGGTGGAG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS CCA 90 bp | ATCCAAGGGCTGGAAGAAGACACATTGAGGAGGCCGGAGAGCGCCTaGCGAGCGGAAGCCACGTCAGCCAACGCATGGCGGCTGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: IQGLEEDTLRRPESA*RAEATSANAWRLDK Trigger: CTTGTCCAGCCGCCATGCGTTGGCTGACGTGGCTTCCGCTCGCCAGGCGCTCTCCGGCCTCCTCAATGTGTCTTCTTCCAGCCCTTGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS GCA 90 bp | CCAGTGCCGCAGGATGCCCTGCCATCACTGAGCCAGGCCCAAGGCTaGCCTCGCCTCCTATGTGCAGAAATACTGGTACATCTTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVPQDALPSLSQAQG*PRLLCAEILVHLGQ Trigger: CTGGCCAAGATGTACCAGTATTTCTGCACATAGGAGGCGAGGGCAGCCTTGGGCCTGGCTCAGTGATGGCAGGGCATCCTGCGGCACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS GCA 90 bp | ACAACCACTGCCGGTCCCCCACACCAGACACTTGCGGTTCGGTGTTaGTCAGCTGTGCCACTGTCTCTGCCCGGGAAAAGCTTAAACACT | + |
|
Preference number: 5 (lower is better) Translates to: TTTAGPPHQTLAVRC*SAVPLSLPGKSLNT Trigger: AGTGTTTAAGCTTTTCCCGGGCAGAGACAGTGGCACAGCTGAGCAACACCGAACCGCAAGTGTCTGGTGTGGGGGACCGGCAGTGGTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS TCA 90 bp | TTGCTGGGAGATTTTCTGACGTCCCAGGCGGAGGCTGGGAGAGTCTaGAGGCCTCATAGGTGCCATATCGAAGCAGTGGGAAGCACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGDFLTSQAEAGRV*RPHRCHIEAVGSTR Trigger: CCTAGTGCTTCCCACTGCTTCGATATGGCACCTATGAGGCCTTCAGACTCTCCCAGCCTCCGCCTGGGACGTCAGAAAATCTCCCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS GCA 90 bp | GTGCCACTGTCTCTGCCCGGGAAAAGCTTAAACACTTCTGTCCCATaGTGCGCAAGACTATCTGTACAGCCCGGCGAAGCCCCAAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VPLSLPGKSLNTSVP*CARLSVQPGEAPSR Trigger: CCTACTTGGGGCTTCGCCGGGCTGTACAGATAGTCTTGCGCAGCATGGGACAGAAGTGTTTAAGCTTTTCCCGGGCAGAGACAGTGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | AACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCACCCCACACCAGACACTaGCGGTTCGGTGTTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: NKQAEQALSPTSRNFLLPPHTRH*RFGVAQ Trigger: CTGAGCAACACCGAACCGCAAGTGTCTGGTGTGGGG...TGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR CAA 90 bp | AACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAACTTGCGGTTCGGTGTaGCTCAGCTGTGCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NKQAEQALSPTSRNFLLPTCGSV*LSCATV Trigger: GACAGTGGCACAGCTGAGCAACACCGAACCGCAAGT...TGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS TCA 90 bp | CTTCTGAATGTGTTCCCTCAGGCGCCTGAGAAGCAAGGCTGGAGTTaGCAGTCCCCAGAGGGAAACCAGAAGCAAGAATCCCAACCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LLNVFPQAPEKQGWS*QSPEGNQKQESQPW Trigger: CCATGGTTGGGATTCTTGCTTCTGGTTTCCCTCTGGGGACTGTCAACTCCAGCCTTGCTTCTCAGGCGCCTGAGGGAACACATTCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | AACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCACACCATAATAGGAGTTaGTCTGGGCCACAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NKQAEQALSPTSRNFLLPHHNRS*SGPQPG Trigger: CCCAGGCTGTGGCCCAGACAAACTCCTATTATGGTG...TGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR CAA 90 bp | AACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCATTGGCCAGTTCTGTGTaGATCATTCACCCAGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: NKQAEQALSPTSRNFLLPLASSV*IIHPVP Trigger: CGGTACTGGGTGAATGATCAACACAGAACTGGCCAA...TGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | CAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAACAGCTGTTTTCTCATTAACAAACAGTACTaGGGTGGCTCCAGGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QALSPTSRNFLLPNSCFLINKQY*GGSRAL Trigger: CAGAGCCCTGGAGCCACCCAAGTACTGTTTGTTAAT...GAGAAAACAGCTGTTTGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR CAA 90 bp | GGAAAGCCACATTCCCCTGACATTTACCATACAGAATATCACTACCTACAAAGGCTGGAAGAAGACACATaGAGGAGGCCGGAGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GKPHSPDIYHTEYHYLQRLEEDT*RRPESA Trigger: GGCGCTCTCCGGCCTCCTCAATGTGTCTTCTTCCAG...CCTTTGTAGGTAGTGATATTCTGTATGGTAAATGTCAGGGGAATGTGGCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | CTATGCAGTAGGTGCCAGTCAAGAATGAAGAGACAGAATTTAAGCCAGGTTCTTCCCCACACCAGACACTaGCGGTTCGGTGTTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCSRCQSRMKRQNLSQVLPHTRH*RFGVAQ Trigger: CTGAGCAACACCGAACCGCAAGTGTCTGGTGTGGGG...AAGAACCTGGCTTAAATTCTGTCTCTTCATTCTTGACTGGCACCTACTGCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS TCA 90 bp | CCTCCTATGTGCAGAAATACTGGTACATCTTGGCCAGTTCTGTGTTaGTCATTCACCCAGTACCGCTGCAGGAAGGTTCGTCTGTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PPMCRNTGTSWPVLC*SFTQYRCRKVRLSD Trigger: ATCTGACAGACGAACCTTCCTGCAGCGGTACTGGGTGAATGATCAACACAGAACTGGCCAAGATGTACCAGTATTTCTGCACATAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS TCA 90 bp | TTCTTTATATCTTTGAGCCAATCCTGTAATTGCTGGGAGATTTTCTaGCGTCCCAGGCGGAGGCTGGGAGAGTCTGAAGGCCTCATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FFISLSQSCNCWEIF*RPRRRLGESEGLIG Trigger: ACCTATGAGGCCTTCAGACTCTCCCAGCCTCCGCCTGGGACGTCAGAAAATCTCCCAGCAATTACAGGATTGGCTCAAAGATATAAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS-3UTR CAA 90 bp | GGAAAGCCACATTCCCCTGACATTTACCATACAGAATATCACTACCTACAAAGGTCTAACCACCCTTGTTaGGGGACAGCCCCAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: GKPHSPDIYHTEYHYLQRSNHPC*GTAPGP Trigger: TGGTCCTGGGGCTGTCCCCAAACAAGGGTGGTTAGA...CCTTTGTAGGTAGTGATATTCTGTATGGTAAATGTCAGGGGAATGTGGCTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | AACAAGCAGGCAGAACAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAAATACTGGTACATCTaGGCCAGTTCTGTGTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: NKQAEQALSPTSRNFLLPKYWYI*ASSVLI Trigger: GATCAACACAGAACTGGCCAAGATGTACCAGTATTT...TGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTGTTCTGCCTGCTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | GGCGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCAAAGGTAGTCCACCATAATAGGAGTTaGTCTGGGCCACAGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGSFLFSITLLKTCSKVVHHNRS*SGPQPG Trigger: CCCAGGCTGTGGCCCAGACAAACTCCTATTATGGTG...GACTACCTTTGAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | TCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCAAAGGTAGTCAGTCAGACTTGCGGTTCGGTGTaGCTCAGCTGTGCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SFLFSITLLKTCSKVVSQTCGSV*LSCATV Trigger: GACAGTGGCACAGCTGAGCAACACCGAACCGCAAGT...CTGACTGACTACCTTTGAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | GGCGGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCAAAGGTAGTCATTAACAAACAGTACTaGGGTGGCTCCAGGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGSFLFSITLLKTCSKVVINKQY*GGSRAL Trigger: CAGAGCCCTGGAGCCACCCAAGTACTGTTTGTTAAT...GACTACCTTTGAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCCGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | TGTTTCCATGTGATTCTAAATTCAGGTAGGCTGACAATGAAGTTCAACTACCACGAAGCAAGGCTGGAGTaGACAGTCCCCAGAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CFHVILNSGRLTMKFNYHEARLE*TVPRGK Trigger: TTTCCCTCTGGGGACTGTCAACTCCAGCCTTGCTTC...GTGGTAGTTGAACTTCATTGTCAGCCTACCTGAATTTAGAATCACATGGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | GGGTCTTTCCTCTTCAGTATAACTTTACTGAAAACGTGCTCAAAGGTAGTCAGTCGTCTGTCAGATGCATaGAAGGGATCCAGTGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSFLFSITLLKTCSKVVSRLSDA*KGSSGC Trigger: ACAGCCACTGGATCCCTTCAATGCATCTGACAGACG...ACTGACTACCTTTGAGCACGTTTTCAGTAAAGTTATACTGAAGAGGAAAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS-3UTR CAA 90 bp | CAGGCACTGAGTCCCACGTCTAGGAACTTCCTCCTTCCAAACAGCTGTTTTCTCCTCTTCTTTATATCTTaGAGCCAATCCTGTAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: QALSPTSRNFLLPNSCFLLFFIS*SQSCNC Trigger: GCAATTACAGGATTGGCTCAAAGATATAAAGAAGAG...GAGAAAACAGCTGTTTGGAAGGAGGAAGTTCCTAGACGTGGGACTCAGTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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| CDS GCA 72 bp | CCGCAGAGCTGGCGCACGCTTAGCGGCGCTCCCGCCTaGCCGTCGTACTGCACGGTGCCGCCCACCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQSWRTLSGAPA*PSYCTVPPTSA Trigger: GGCGCTGGTGGGCGGCACCGTGCAGTACGACGGGCAGGCGGGAGCGCCGCTAAGCGTGCGCCAGCTCTGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS GCA 72 bp | CGCACGCTTAGCGGCGCTCCCGCCTGCCCGTCGTACTaGACGGTGCCGCCCACCAGCGCCTGCAACGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RTLSGAPACPSY*TVPPTSACNAP Trigger: GGGAGCGTTGCAGGCGCTGGTGGGCGGCACCGTGCAGTACGACGGGCAGGCGGGAGCGCCGCTAAGCGTGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS GCA 72 bp | TTAGCGGCGCTCCCGCCTGCCCGTCGTACTGCACGGTaGCGCCCACCAGCGCCTGCAACGCTCCCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LAALPPARRTAR*RPPAPATLPAA Trigger: AGCTGCTGGGAGCGTTGCAGGCGCTGGTGGGCGGCACCGTGCAGTACGACGGGCAGGCGGGAGCGCCGCTAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS GCA 72 bp | CAGCCCGGCGAAGCCCCAAGTAGGGCGTGGAGCGGCTaGGGTTTCCCCACTTCCCGAGCAGGAGACCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPGEAPSRAWSG*GFPTSRAGDRR Trigger: TCTGCGGTCTCCTGCTCGGGAAGTGGGGAAACCGCAGCCGCTCCACGCCCTACTTGGGGCTTCGCCGGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS CCA 72 bp | GGCGAGCGGAAGCCACGTCAGCCAACGCATGGCGGCTaGACAAGTAGCGAAGCAGGGCCAGATCCAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GERKPRQPTHGG*TSSEAGPDPGP Trigger: GGGGCCTGGATCTGGCCCTGCTTCGCTACTTGTCCAGCCGCCATGCGTTGGCTGACGTGGCTTCCGCTCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS CCA 72 bp | CTGGAAGAAGACACATTGAGGAGGCCGGAGAGCGCCTaGCGAGCGGAAGCCACGTCAGCCAACGCATGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LEEDTLRRPESA*RAEATSANAWR Trigger: CCGCCATGCGTTGGCTGACGTGGCTTCCGCTCGCCAGGCGCTCTCCGGCCTCCTCAATGTGTCTTCTTCCAG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS GCA 72 bp | GCCGGTCCCCCACACCAGACACTTGCGGTTCGGTGTTaGTCAGCTGTGCCACTGTCTCTGCCCGGGAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGPPHQTLAVRC*SAVPLSLPGKS Trigger: GCTTTTCCCGGGCAGAGACAGTGGCACAGCTGAGCAACACCGAACCGCAAGTGTCTGGTGTGGGGGACCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
||
| CDS CAA 72 bp | CCTCCGAAGCAGATCCAAGGGCTGGAAGAAGACACATaGAGGAGGCCGGAGAGCGCCTGGCGAGCGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPKQIQGLEEDT*RRPESAWRAEA Trigger: GGCTTCCGCTCGCCAGGCGCTCTCCGGCCTCCTCAATGTGTCTTCTTCCAGCCCTTGGATCTGCTTCGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
||
| CDS CAA 72 bp | TGCCGGTCCCCCACACCAGACACTTGCGGTTCGGTGTaGCTCAGCTGTGCCACTGTCTCTGCCCGGGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CRSPTPDTCGSV*LSCATVSAREK Trigger: CTTTTCCCGGGCAGAGACAGTGGCACAGCTGAGCAACACCGAACCGCAAGTGTCTGGTGTGGGGGACCGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
||
| CDS CAA 90 bp | AGTGCATGTCTGGTACAACCACTGCCGGTCCCCCACACCAGACACTaGCGGTTCGGTGTTGCTCAGCTGTGCCACTGTCTCTGCCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SACLVQPLPVPHTRH*RFGVAQLCHCLCPG Trigger: TCCCGGGCAGAGACAGTGGCACAGCTGAGCAACACCGAACCGCAAGTGTCTGGTGTGGGGGACCGGCAGTGGTTGTACCAGACATGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
||
| CDS CAA 72 bp | CTGGTACAACCACTGCCGGTCCCCCACACCAGACACTaGCGGTTCGGTGTTGCTCAGCTGTGCCACTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LVQPLPVPHTRH*RFGVAQLCHCL Trigger: GAGACAGTGGCACAGCTGAGCAACACCGAACCGCAAGTGTCTGGTGTGGGGGACCGGCAGTGGTTGTACCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
||
| CDS CAA 90 bp | TACAACCACTGCCGGTCCCCCACACCAGACACTTGCGGTTCGGTGTaGCTCAGCTGTGCCACTGTCTCTGCCCGGGAAAAGCTTAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: YNHCRSPTPDTCGSV*LSCATVSAREKLKH Trigger: GTGTTTAAGCTTTTCCCGGGCAGAGACAGTGGCACAGCTGAGCAACACCGAACCGCAAGTGTCTGGTGTGGGGGACCGGCAGTGGTTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
||
| CDS CCA 72 bp | TCTAACCACCCTTGTTTGGGGACAGCCCCAGGACCATaGCCTAGTCCAAAGCCTGGGTGTAGGCTAGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SNHPCLGTAPGP*PSPKPGCRLEL Trigger: GAGCTCTAGCCTACACCCAGGCTTTGGACTAGGCCATGGTCCTGGGGCTGTCCCCAAACAAGGGTGGTTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS CAA 72 bp | TTGAAGGGATCCAGTGGCTGTTCTAACCACCCTTGTTaGGGGACAGCCCCAGGACCATGGCCTAGTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LKGSSGCSNHPC*GTAPGPWPSPK Trigger: CTTTGGACTAGGCCATGGTCCTGGGGCTGTCCCCAAACAAGGGTGGTTAGAACAGCCACTGGATCCCTTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS CAA 90 bp | CCCAAGGCTGCCCTCGCCTCCTATGTGCAGAAATACTGGTACATCTaGGCCAGTTCTGTGTTGATCATTCACCCAGTACCGCTGCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PKAALASYVQKYWYI*ASSVLIIHPVPLQE Trigger: TTCCTGCAGCGGTACTGGGTGAATGATCAACACAGAACTGGCCAAGATGTACCAGTATTTCTGCACATAGGAGGCGAGGGCAGCCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS TCA 72 bp | AGTACCGCTGCAGGAAGGTTCGTCTGTCAGATGCATTaGAGGGATCCAGTGGCTGTTCTAACCACCCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: STAAGRFVCQMH*RDPVAVLTTLV Trigger: AACAAGGGTGGTTAGAACAGCCACTGGATCCCTTCAATGCATCTGACAGACGAACCTTCCTGCAGCGGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS CAA 72 bp | GCCCTCGCCTCCTATGTGCAGAAATACTGGTACATCTaGGCCAGTTCTGTGTTGATCATTCACCCAGTACCG | + |
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Preference number: 6 (lower is better) Translates to: ALASYVQKYWYI*ASSVLIIHPVP Trigger: CGGTACTGGGTGAATGATCAACACAGAACTGGCCAAGATGTACCAGTATTTCTGCACATAGGAGGCGAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS CAA 90 bp | GCCTCCTATGTGCAGAAATACTGGTACATCTTGGCCAGTTCTGTGTaGATCATTCACCCAGTACCGCTGCAGGAAGGTTCGTCTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ASYVQKYWYILASSV*IIHPVPLQEGSSVR Trigger: TCTGACAGACGAACCTTCCTGCAGCGGTACTGGGTGAATGATCAACACAGAACTGGCCAAGATGTACCAGTATTTCTGCACATAGGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS CAA 72 bp | GTGCAGAAATACTGGTACATCTTGGCCAGTTCTGTGTaGATCATTCACCCAGTACCGCTGCAGGAAGGTTCG | + |
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Preference number: 6 (lower is better) Translates to: VQKYWYILASSV*IIHPVPLQEGS Trigger: CGAACCTTCCTGCAGCGGTACTGGGTGAATGATCAACACAGAACTGGCCAAGATGTACCAGTATTTCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006341.4 |
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| CDS CAA 90 bp | GCTCAATACATGCCAAGGATCTGTGTCTCCATTAACAAACAGTACTaGGGTGGCTCCAGGGCTCTGACCACCATAATAGGAGTTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: AQYMPRICVSINKQY*GGSRALTTIIGVCL Trigger: CAGACAAACTCCTATTATGGTGGTCAGAGCCCTGGAGCCACCCAAGTACTGTTTGTTAATGGAGACACAGATCCTTGGCATGTATTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006341.4 ENSMUST00000150547.3 |
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