Pregenerated sensors for PRRXL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041730Ensembl transcript IDs: ENSMUST00000068938.7, ENSMUST00000186452.7, ENSMUST00000187377.7, ENSMUST00000189022.8, ENSMUST00000228878.2
Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGACCGGGCCAGGAGAGGGGCACACGCTATTGCACATCTCCCTCTaGTCTCTCCGAGGTCACCATCTGCATGGAAGAACACAGCCACAC | + |
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Preference number: 1 (lower is better) Translates to: RTGPGEGHTLLHISL*SLRGHHLHGRTQPH Trigger: GTGTGGCTGTGTTCTTCCATGCAGATGGTGACCTCGGAGAGATCAGAGGGAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCGGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR GCA 90 bp | AGAGGGACTCTCCAGCTCTCAACCAGCTGCAGGTCTCGCTTCCCCTaGCAGGTCCTTGAGGAGGCAGCTACTCCTTGTGGTTCAGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: RGTLQLSTSCRSRFP*QVLEEAATPCGSED Trigger: ATCCTCTGAACCACAAGGAGTAGCTGCCTCCTCAAGGACCTGGCAGGGGAAGCGAGACCTGCAGCTGGTTGAGAGCTGGAGAGTCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR GCA 90 bp | GCCTACCAGCAGAATTCTAGAGGGACTCTCCAGCTCTCAACCAGCTaGAGGTCTCGCTTCCCCTGCCAGGTCCTTGAGGAGGCAGCTACT | + |
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Preference number: 1 (lower is better) Translates to: AYQQNSRGTLQLSTS*RSRFPCQVLEEAAT Trigger: AGTAGCTGCCTCCTCAAGGACCTGGCAGGGGAAGCGAGACCTGCAGCTGGTTGAGAGCTGGAGAGTCCCTCTAGAATTCTGCTGGTAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR GCA 90 bp | TGTGTGGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTaGAGGACCGGGCCAGGAGAGGGGCACACGCTATTGCACATCTCC | + |
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Preference number: 1 (lower is better) Translates to: CVETSSPKATNNHNP*RTGPGEGHTLLHIS Trigger: GGAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCGGTCCTGCAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR TCA 90 bp | GGGGAGGCAGATGGCCTGGAAGCGGGGCCTCTCGATTATCAGAACTaGAACGATAACAGCCTTCATGAAAGCAATGGCTGTTTGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: GEADGLEAGPLDYQN*NDNSLHESNGCLCG Trigger: TCCACACAAACAGCCATTGCTTTCATGAAGGCTGTTATCGTTTCAGTTCTGATAATCGAGAGGCCCCGCTTCCAGGCCATCTGCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR GCA 90 bp | TGTGGTTTTAAGCAATGTGGGAGCGACTCATTTCCTGTCATGAGATaGCACTTCTGGGCATCTTTCAGGAATGATCCATGCCATGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: CGFKQCGSDSFPVMR*HFWASFRNDPCHGP Trigger: GGGGCCATGGCATGGATCATTCCTGAAAGATGCCCAGAAGTGGCATCTCATGACAGGAAATGAGTCGCTCCCACATTGCTTAAAACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR GCA 90 bp | ACACGCTATTGCACATCTCCCTCTGATCTCTCCGAGGTCACCATCTaGATGGAAGAACACAGCCACACTAGACTGAGGCAGAAATCTCTA | + |
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Preference number: 1 (lower is better) Translates to: TRYCTSPSDLSEVTI*MEEHSHTRLRQKSL Trigger: TAGAGATTTCTGCCTCAGTCTAGTGTGGCTGTGTTCTTCCATGCAGATGGTGACCTCGGAGAGATCAGAGGGAGATGTGCAATAGCGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR CCA 90 bp | TGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTaGCGAGAAGAACTAATCTGCTTTGCTCCAAGACTGCTTGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: WPLELTRPSQIAQEG*REELICFAPRLLGL Trigger: TAGGCCAAGCAGTCTTGGAGCAAAGCAGATTAGTTCTTCTCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR TCA 90 bp | CTCATTTCCTGTCATGAGATGCCACTTCTGGGCATCTTTCAGGAATaGTCCATGCCATGGCCCCTGGAATTGACAAGACCTTCTCAGATA | + |
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Preference number: 1 (lower is better) Translates to: LISCHEMPLLGIFQE*SMPWPLELTRPSQI Trigger: TATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGGCATGGATCATTCCTGAAAGATGCCCAGAAGTGGCATCTCATGACAGGAAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR TCA 90 bp | ACTAGTCCACACAGTGTGGCTGTCATCTACAAGCATGTAAGAAAATaGTGGCGATATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGC | + |
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Preference number: 1 (lower is better) Translates to: TSPHSVAVIYKHVRK*WRYGDVSKVKSICR Trigger: GCGGCAAATGCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTCTTACATGCTTGTAGATGACAGCCACACTGTGTGGACTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| 3UTR TCA 90 bp | TGCATGGAAGAACACAGCCACACTAGACTGAGGCAGAAATCTCTATaGAATTTGGCCCTTTGGATTTCATTTTCTTCCGCCACACGGAGT | + |
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Preference number: 1 (lower is better) Translates to: CMEEHSHTRLRQKSL*NLALWISFSSATRS Trigger: ACTCCGTGTGGCGGAAGAAAATGAAATCCAAAGGGCCAAATTTCATAGAGATTTCTGCCTCAGTCTAGTGTGGCTGTGTTCTTCCATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR TCA 90 bp | TCTCCGAGGTCACCATCTGCATGGAAGAACACAGCCACACTAGACTaGGGCAGAAATCTCTATGAAATTTGGCCCTTTGGATTTCATTTT | + |
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Preference number: 1 (lower is better) Translates to: SPRSPSAWKNTATLD*GRNLYEIWPFGFHF Trigger: AAAATGAAATCCAAAGGGCCAAATTTCATAGAGATTTCTGCCTCAGTCTAGTGTGGCTGTGTTCTTCCATGCAGATGGTGACCTCGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR GCA 90 bp | ACATCATGCATCGGTTACTTTTGCCCTTTGTACATCAGAACTAAGTaGTCAGATATCTCTGCAGAGGTTTGGCTCTCGCTGTTTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: TSCIGYFCPLYIRTK*SDISAEVWLSLFFL Trigger: AAGGAAAAACAGCGAGAGCCAAACCTCTGCAGAGATATCTGAGCACTTAGTTCTGATGTACAAAGGGCAAAAGTAACCGATGCATGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| 3UTR CCA 90 bp | CTGGAGCATACATCGCCCAACCAAACCTTCATAATTACAGGGAAATaGAAGCAACTTGGCCACTTTTTGGCAAATCGCTTCATCTTTGTA | + |
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Preference number: 1 (lower is better) Translates to: LEHTSPNQTFIITGK*KQLGHFLANRFIFV Trigger: TACAAAGATGAAGCGATTTGCCAAAAAGTGGCCAAGTTGCTTCCATTTCCCTGTAATTATGAAGGTTTGGTTGGGCGATGTATGCTCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| 3UTR GCA 90 bp | TTTCTTTCCAGAACGTCAGGCAGACTTTTCAATGTGATCCAGTTTTaGACAGTCACTGGAGTGTCGCGTCATGAATTATTAAATCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: FLSRTSGRLFNVIQF*TVTGVSRHELLNQC Trigger: GCACTGATTTAATAATTCATGACGCGACACTCCAGTGACTGTGCAAAACTGGATCACATTGAAAAGTCTGCCTGACGTTCTGGAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| 3UTR GCA 90 bp | CAGGTGTTTAAAGGAACAGAAACGACATCATGCATCGGTTACTTTTaGCCTTTGTACATCAGAACTAAGTGCTCAGATATCTCTGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: QVFKGTETTSCIGYF*PLYIRTKCSDISAE Trigger: CTCTGCAGAGATATCTGAGCACTTAGTTCTGATGTACAAAGGGCAAAAGTAACCGATGCATGATGTCGTTTCTGTTCCTTTAAACACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| 3UTR CCA 90 bp | ATCGCCCAACCAAACCTTCATAATTACAGGGAAATGGAAGCAACTTaGCCACTTTTTGGCAAATCGCTTCATCTTTGTACTCAACAAGCA | + |
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Preference number: 1 (lower is better) Translates to: IAQPNLHNYREMEAT*PLFGKSLHLCTQQA Trigger: TGCTTGTTGAGTACAAAGATGAAGCGATTTGCCAAAAAGTGGCCAAGTTGCTTCCATTTCCCTGTAATTATGAAGGTTTGGTTGGGCGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| 3UTR TCA 90 bp | ATGTACCTTTCTGGAGGAAATACGAGTTTAATCAAACAATTAGATTaGAGAGTTAGTGTGCATAAGGGCTGGAGCATACATCGCCCAACC | + |
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Preference number: 1 (lower is better) Translates to: MYLSGGNTSLIKQLD*RVSVHKGWSIHRPT Trigger: GGTTGGGCGATGTATGCTCCAGCCCTTATGCACACTAACTCTTCAATCTAATTGTTTGATTAAACTCGTATTTCCTCCAGAAAGGTACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| 3UTR GCA 90 bp | TTCTCAGATAGCTCAAGAAGGTTGGCGAGAAGAACTAATCTGCTTTaGTCCAAGACTGCTTGGCCTAAAACAAACAAACAAACAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: FSDSSRRLARRTNLL*SKTAWPKTNKQTNK Trigger: TTTGTTTGTTTGTTTGTTTGTTTTAGGCCAAGCAGTCTTGGAGCAAAGCAGATTAGTTCTTCTCGCCAACCTTCTTGAGCTATCTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR GCA 90 bp | AAGTCTAAATTTATTCAGGTGTTTAAAGGAACAGAAACGACATCATaGATCGGTTACTTTTGCCCTTTGTACATCAGAACTAAGTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: KSKFIQVFKGTETTS*IGYFCPLYIRTKCS Trigger: TGAGCACTTAGTTCTGATGTACAAAGGGCAAAAGTAACCGATGCATGATGTCGTTTCTGTTCCTTTAAACACCTGAATAAATTTAGACTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGCCAGGAGAGGGGCACACGCTATTGCACATCTCCCTCTGATCTCTCCGAGGGGCAGCTACTCCTTGTaGTTCAGAGGATGGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RARRGAHAIAHLPLISPRGSYSL*FRGWQG Trigger: GCCCTGCCATCCTCTGAACCACAAGGAGTAGCTGCC...CCTCGGAGAGATCAGAGGGAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR CCA 90 bp | CTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTTCAGGGACCGGCAGCTACTCCTTGTaGTTCAGAGGATGGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LHTGDMKTGGSSGHISGTGSYSL*FRGWQG Trigger: GCCCTGCCATCCTCTGAACCACAAGGAGTAGCTGCC...GGTCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR CCA 90 bp | CGGGCCAGGAGAGGGGCACACGCTATTGCACATCTCCCTCTGATCTCTCCGAGGATTTCCTCCCACTTCTaGGGCTCTTGTCCTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: RARRGAHAIAHLPLISPRISSHF*GSCPFV Trigger: CACAAAAGGACAAGAGCCCCAGAAGTGGGAGGAAAT...CCTCGGAGAGATCAGAGGGAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGGACCGGGCCAGGAGAGGGGCACACGCTATTGCACATCTCCCTCTGATCTTTCAGGGACCTTCCTaGGGATTTCCTCCCACTTCT | + |
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Preference number: 2 (lower is better) Translates to: LQDRARRGAHAIAHLPLIFQGPS*GFPPTS Trigger: AGAAGTGGGAGGAAATCCCCAGGAAGGTCCCTGAAA...GATCAGAGGGAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCGGTCCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCATGCCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGCCCCTGCCAGGTCCTTaGGGAGGCAGCTACTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: IHAMAPGIDKTFSDSSRRPLPGP*GGSYSL Trigger: CAAGGAGTAGCTGCCTCCTCAAGGACCTGGCAGGGG...CCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGGCATGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR TCA 90 bp | ACGGAGTCATCTTACTGGGTTTCCTGTCTTGTCACCCTCTCTACATACAGGGGACCCCTGCCAGGTCCTTaGGGAGGCAGCTACTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: TESSYWVSCLVTLSTYRGPLPGP*GGSYSL Trigger: CAAGGAGTAGCTGCCTCCTCAAGGACCTGGCAGGGG...TCCCCTGTATGTAGAGAGGGTGACAAGACAGGAAACCCAGTAAGATGACTCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR CAA 90 bp | TTGTGTGGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTaGCAGGACCGGGCCAGGAGAGGGGCACACGCTATTGCACATCTC | + |
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Preference number: 2 (lower is better) Translates to: LCGNIITKSHQQPQP*QDRARRGAHAIAHL Trigger: GAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCGGTCCTGCAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCCACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTTTGTGTGGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGAGGTCTCGCTTCCCCTaGCAGGTCCTTGAGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GCLCGNIITKSHQQPQPLRSRFP*QVLEEA Trigger: TGCCTCCTCAAGGACCTGGCAGGGGAAGCGAGACCT...CAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCCACACAAACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGAGGCAGATGGCCTGGAAGCGGGGCCTCTCGATTATCAGAACTGAAACGAAGGTCACCATCTGCATaGAAGAACACAGCCACACTA | + |
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Preference number: 2 (lower is better) Translates to: RGGRWPGSGASRLSELKRRSPSA*KNTATL Trigger: TAGTGTGGCTGTGTTCTTCCATGCAGATGGTGACCT...TCGTTTCAGTTCTGATAATCGAGAGGCCCCGCTTCCAGGCCATCTGCCTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR CAA 90 bp | GGACCTTCCTGGGGATTTCCTCCCACTTCTGGGGCTCTTGTCCTTTaGTGGGCCATAAAGCTACGTTCTGAACTAGTGAACTTCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: GPSWGFPPTSGALVL*WAIKLRSELVNFPS Trigger: TGATGGGAAGTTCACTAGTTCAGAACGTAGCTTTATGGCCCACAAAAGGACAAGAGCCCCAGAAGTGGGAGGAAATCCCCAGGAAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTTTGTGTGGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGTACATACAGGGGACATaGAGACAGGCGGCTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GCLCGNIITKSHQQPQPLYIQGT*RQAAPL Trigger: CAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTA...CAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCCACACAAACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR GCA 90 bp | CTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTTCAGGGACCTTTCCTGTCATGAGATaGCACTTCTGGGCATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: LHTGDMKTGGSSGHISGTFPVMR*HFWASF Trigger: GAAAGATGCCCAGAAGTGGCATCTCATGACAGGAAA...GGTCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR TCA 90 bp | ACGGAGTCATCTTACTGGGTTTCCTGTCTTGTCACCCTCTCTACATACAGGGGAGGATCAGGACCACTGTaGCCATATCTTGTCACTTCC | + |
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Preference number: 2 (lower is better) Translates to: TESSYWVSCLVTLSTYRGGSGPL*PYLVTS Trigger: GGAAGTGACAAGATATGGTCACAGTGGTCCTGATCC...TCCCCTGTATGTAGAGAGGGTGACAAGACAGGAAACCCAGTAAGATGACTCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAATGATGGCGATATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTCTCCAGAGGATCCAATaGCCTCTTCTAGCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ENDGDMVMSPRSRAFAALLQRIQ*PLLASR Trigger: CCTGGAGGCTAGAAGAGGGCATTGGATCCTCTGGAG...AAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGCCAGGGGAACCTGCTAGGATCAGGACCACTGTGACCATATCTTGTCACGAAGAGAGTGAGAACTaGTTGATAGCCTATCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: TGPGEPARIRTTVTISCHEESEN*LIAYQF Trigger: GAACTGATAGGCTATCAACCAGTTCTCACTCTCTTC...GTGACAAGATATGGTCACAGTGGTCCTGATCCTAGCAGGTTCCCCTGGCCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR CAA 90 bp | ATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTaGGCGAGAAGAACTAATCTGCTTTGCTCCAAGACTGCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: MAPGIDKTFSDSSRR*ARRTNLLCSKTAWP Trigger: AGGCCAAGCAGTCTTGGAGCAAAGCAGATTAGTTCTTCTCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR CCA 90 bp | TCACCCTCTCTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTGAAGAGAGTGAGAACTaGTTGATAGCCTATCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SPSLHTGDMKTGGSSGHIEESEN*LIAYQF Trigger: GAACTGATAGGCTATCAACCAGTTCTCACTCTCTTC...AATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAGAGAGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTGGTCCACTGTCTGTCAGAAATGTAACTAGTCCACACAGTGTGGCTGTCATGATGGCGATATGGTaGTGTCTCCAAGGTCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: LSGPLSVRNVTSPHSVAVMMAIW*CLQGQE Trigger: CTCTTGACCTTGGAGACATCACCATATCGCCATCAT...GACAGCCACACTGTGTGGACTAGTTACATTTCTGACAGACAGTGGACCAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGACTGAAGAGAGTGAGAACTGGTTGATAGCCTATCAGTTCTGTGGTTTTGGCATCTTTCAGGAATaGTCCATGCCATGGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: VLTEESENWLIAYQFCGFGIFQE*SMPWPL Trigger: CAGGGGCCATGGCATGGATCATTCCTGAAAGATGCC...AAAACCACAGAACTGATAGGCTATCAACCAGTTCTCACTCTCTTCAGTCAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR GCA 90 bp | ACGGAGTCATCTTACTGGGTTTCCTGTCTTGTCACCCTCTCTACATACAGGGGATTTCCTGTCATGAGATaGCACTTCTGGGCATCTTTC | + |
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Preference number: 2 (lower is better) Translates to: TESSYWVSCLVTLSTYRGFPVMR*HFWASF Trigger: GAAAGATGCCCAGAAGTGGCATCTCATGACAGGAAA...TCCCCTGTATGTAGAGAGGGTGACAAGACAGGAAACCCAGTAAGATGACTCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTGTTTGTGTGGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGACAGCCACACTAGACTaGGGCAGAAATCTCTATGAA | + |
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Preference number: 2 (lower is better) Translates to: GCLCGNIITKSHQQPQPLTATLD*GRNLYE Trigger: TTCATAGAGATTTCTGCCTCAGTCTAGTGTGGCTGT...CAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCCACACAAACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTGGTCCACTGTCTGTCAGAAATGTAACTAGTCCACACAGTGTGGCTGTCAAGCATGTAAGAAAATaGTGGCGATATGGTGATGTC | + |
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Preference number: 2 (lower is better) Translates to: LSGPLSVRNVTSPHSVAVKHVRK*WRYGDV Trigger: GACATCACCATATCGCCATCATTTTCTTACATGCTT...GACAGCCACACTGTGTGGACTAGTTACATTTCTGACAGACAGTGGACCAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| 3UTR CAA 90 bp | GGAAATGGAAGCAACTTGGCCACTTTTTGGCAAATCGCTTCATCTTaGTACTCAACAAGCAAAATACAGCAAGAACAAGGACCTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GNGSNLATFWQIASS*YSTSKIQQEQGPGF Trigger: AAAGCCAGGTCCTTGTTCTTGCTGTATTTTGCTTGTTGAGTACAAAGATGAAGCGATTTGCCAAAAAGTGGCCAAGTTGCTTCCATTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| 3UTR CAA 90 bp | TTTAAAGGAACAGAAACGACATCATGCATCGGTTACTTTTGCCCTTaGTACATCAGAACTAAGTGCTCAGATATCTCTGCAGAGGTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: FKGTETTSCIGYFCP*YIRTKCSDISAEVW Trigger: CCAAACCTCTGCAGAGATATCTGAGCACTTAGTTCTGATGTACAAAGGGCAAAAGTAACCGATGCATGATGTCGTTTCTGTTCCTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTCAGGTGTTTAAAGGAACAGAAACGACATCATGCATCGGTTACTTTTGCCCTATGAGATGCCACTTCTaGGCATCTTTCAGGAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: IQVFKGTETTSCIGYFCPMRCHF*ASFRND Trigger: ATCATTCCTGAAAGATGCCCAGAAGTGGCATCTCAT...AGGGCAAAAGTAACCGATGCATGATGTCGTTTCTGTTCCTTTAAACACCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR CAA 90 bp | CAAACCTTCATAATTACAGGGAAATGGAAGCAACTTGGCCACTTTTaGGCAAATCGCTTCATCTTTGTACTCAACAAGCAAAATACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: QTFIITGKWKQLGHF*ANRFIFVLNKQNTA Trigger: TGCTGTATTTTGCTTGTTGAGTACAAAGATGAAGCGATTTGCCAAAAAGTGGCCAAGTTGCTTCCATTTCCCTGTAATTATGAAGGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR-3UTR GCA 90 bp | AATTTGCCCAACAGTTCACTTATTTATGTACCTTTCTGGAGGAAATACGAGTTTGTGTGTTCCATCAGATaGATTGCCATAACCGTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NLPNSSLIYVPFWRKYEFVCSIR*IAITVS Trigger: ACTTACGGTTATGGCAATGCATCTGATGGAACACAC...AAACTCGTATTTCCTCCAGAAAGGTACATAAATAAGTGAACTGTTGGGCAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR CAA 90 bp | CAGCATAACTACTTTTCGGATGCAATGCTGTTAAGTATTCTTAATTaGCCCAACAGTTCACTTATTTATGTACCTTTCTGGAGGAAATAC | + |
|
Preference number: 2 (lower is better) Translates to: QHNYFSDAMLLSILN*PNSSLIYVPFWRKY Trigger: GTATTTCCTCCAGAAAGGTACATAAATAAGTGAACTGTTGGGCAAATTAAGAATACTTAACAGCATTGCATCCGAAAAGTAGTTATGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGAGGCAGATGGCCTGGAAGCGGGGCCTCTCGATTATCAGAACTGAAACGATCCCCTGCCAGGTCCTaGAGGAGGCAGCTACTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RGGRWPGSGASRLSELKRSPARS*RRQLLL Trigger: AAGGAGTAGCTGCCTCCTCAAGGACCTGGCAGGGGA...TCGTTTCAGTTCTGATAATCGAGAGGCCCCGCTTCCAGGCCATCTGCCTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR GCA 72 bp | CAGAATTCTAGAGGGACTCTCCAGCTCTCAACCAGCTaGAGGTCTCGCTTCCCCTGCCAGGTCCTTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QNSRGTLQLSTS*RSRFPCQVLEE Trigger: CTCCTCAAGGACCTGGCAGGGGAAGCGAGACCTGCAGCTGGTTGAGAGCTGGAGAGTCCCTCTAGAATTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGCAGGACCGGGCCGGAGGCAGCTACTCCTaGTGGTTCAGAGGATGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GNIITKSHQQPQPLQDRAGGSYS*WFRGWQ Trigger: CTGCCATCCTCTGAACCACAAGGAGTAGCTGCCTCC...GGCCCGGTCCTGCAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR TCA 72 bp | CCAGGAGAGGGGCACACGCTATTGCACATCTCCCTCTaGTCTCTCCGAGGTCACCATCTGCATGGAAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: PGEGHTLLHISL*SLRGHHLHGRT Trigger: TGTTCTTCCATGCAGATGGTGACCTCGGAGAGATCAGAGGGAGATGTGCAATAGCGTGTGCCCCTCTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTATTGCACATCTCCCTCTGATCTCTCCGAGGTCACCATCTGCATGGAAGAACGGAGGCAGCTACTCCTaGTGGTTCAGAGGATGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AIAHLPLISPRSPSAWKNGGSYS*WFRGWQ Trigger: CTGCCATCCTCTGAACCACAAGGAGTAGCTGCCTCC...GTTCTTCCATGCAGATGGTGACCTCGGAGAGATCAGAGGGAGATGTGCAATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR CCA 72 bp | GGGAGCGACTCATTTCCTGTCATGAGATGCCACTTCTaGGCATCTTTCAGGAATGATCCATGCCATGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: GSDSFPVMRCHF*ASFRNDPCHGP Trigger: GGGGCCATGGCATGGATCATTCCTGAAAGATGCCCAGAAGTGGCATCTCATGACAGGAAATGAGTCGCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR CCA 72 bp | TCTACATACAGGGGACATGAAGACAGGCGGCTCCTCTaGGCATATTTCAGGGACCTTCCTGGGGATTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: STYRGHEDRRLL*AYFRDLPGDFL Trigger: GAGGAAATCCCCAGGAAGGTCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR TCA 72 bp | TTCCTGTCTTGTCACCCTCTCTACATACAGGGGACATaGAGACAGGCGGCTCCTCTGGGCATATTTCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FLSCHPLYIQGT*RQAAPLGIFQG Trigger: TCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAGAGAGGGTGACAAGACAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACCCTCTCTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTGGGCTGTTGACAGTCTaGACTGAAGAGAGTGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SPSLHTGDMKTGGSSGHIGLLTV*TEESEN Trigger: GTTCTCACTCTCTTCAGTCAAGACTGTCAACAGCCC...AATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAGAGAGGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGGGCCAGGGGAACCTGCTAGGATCAGGACCACTGTGACCATATCTTGTCACAGAGAAAAGGGGCTGTaGACAGTCTTGACTGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TGPGEPARIRTTVTISCHREKGL*TVLTEE Trigger: CTCTTCAGTCAAGACTGTCAACAGCCCCTTTTCTCT...GTGACAAGATATGGTCACAGTGGTCCTGATCCTAGCAGGTTCCCCTGGCCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAGGACCGGGCCAGGAGAGGGGCACACGCTATTGCACATCTCCCTCTGATCATGAAATTTGGCCCTTaGGATTTCATTTTCTTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: LQDRARRGAHAIAHLPLIMKFGP*DFIFFR Trigger: GCGGAAGAAAATGAAATCCAAAGGGCCAAATTTCAT...GATCAGAGGGAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCGGTCCTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR TCA 72 bp | CAAGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTaGCTTCAGTTCCCAGCAACCATACCCGATAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: QGQEHLPLFQRT*LQFPATIPDSL Trigger: TAAGCTATCGGGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| 3UTR TCA 72 bp | GATGGCCTGGAAGCGGGGCCTCTCGATTATCAGAACTaGAACGATAACAGCCTTCATGAAAGCAATGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DGLEAGPLDYQN*NDNSLHESNGC Trigger: ACAGCCATTGCTTTCATGAAGGCTGTTATCGTTTCAGTTCTGATAATCGAGAGGCCCCGCTTCCAGGCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR GCA 72 bp | AAGCAATGTGGGAGCGACTCATTTCCTGTCATGAGATaGCACTTCTGGGCATCTTTCAGGAATGATCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: KQCGSDSFPVMR*HFWASFRNDPC Trigger: GCATGGATCATTCCTGAAAGATGCCCAGAAGTGGCATCTCATGACAGGAAATGAGTCGCTCCCACATTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR CCA 72 bp | GGATTTCCTCCCACTTCTGGGGCTCTTGTCCTTTTGTaGGCCATAAAGCTACGTTCTGAACTAGTGAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: GFPPTSGALVLL*AIKLRSELVNF Trigger: GAAGTTCACTAGTTCAGAACGTAGCTTTATGGCCCACAAAAGGACAAGAGCCCCAGAAGTGGGAGGAAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR TCA 72 bp | CACAGTGTGGCTGTCATCTACAAGCATGTAAGAAAATaGTGGCGATATGGTGATGTCTCCAAGGTCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSVAVIYKHVRK*WRYGDVSKVKS Trigger: GCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTCTTACATGCTTGTAGATGACAGCCACACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| 3UTR TCA 72 bp | GTTTTAAGCAATGTGGGAGCGACTCATTTCCTGTCATaGGATGCCACTTCTGGGCATCTTTCAGGAATGATC | + |
|
Preference number: 3 (lower is better) Translates to: VLSNVGATHFLS*DATSGHLSGMI Trigger: GATCATTCCTGAAAGATGCCCAGAAGTGGCATCTCATGACAGGAAATGAGTCGCTCCCACATTGCTTAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR GCA 72 bp | ATCGGTTACTTTTGCCCTTTGTACATCAGAACTAAGTaGTCAGATATCTCTGCAGAGGTTTGGCTCTCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: IGYFCPLYIRTK*SDISAEVWLSL Trigger: CAGCGAGAGCCAAACCTCTGCAGAGATATCTGAGCACTTAGTTCTGATGTACAAAGGGCAAAAGTAACCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR GCA 72 bp | CAGATAGCTCAAGAAGGTTGGCGAGAAGAACTAATCTaGTTTGCTCCAAGACTGCTTGGCCTAAAACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QIAQEGWREELI*FAPRLLGLKQT Trigger: TGTTTGTTTTAGGCCAAGCAGTCTTGGAGCAAAGCAGATTAGTTCTTCTCGCCAACCTTCTTGAGCTATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR CCA 72 bp | GAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTaGCGAGAAGAACTAATCTGCTTTGCTCCAAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: ELTRPSQIAQEG*REELICFAPRL Trigger: CAGTCTTGGAGCAAAGCAGATTAGTTCTTCTCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR CCA 72 bp | GGGCTGTTGACAGTCTTGACTGAAGAGAGTGAGAACTaGTTGATAGCCTATCAGTTCTGTGGTTTTAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GLLTVLTEESEN*LIAYQFCGFKQ Trigger: TTGCTTAAAACCACAGAACTGATAGGCTATCAACCAGTTCTCACTCTCTTCAGTCAAGACTGTCAACAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR CCA 72 bp | ACATCGCCCAACCAAACCTTCATAATTACAGGGAAATaGAAGCAACTTGGCCACTTTTTGGCAAATCGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TSPNQTFIITGK*KQLGHFLANRF Trigger: GAAGCGATTTGCCAAAAAGTGGCCAAGTTGCTTCCATTTCCCTGTAATTATGAAGGTTTGGTTGGGCGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR GCA 72 bp | AGCTCAAGAAGGTTGGCGAGAAGAACTAATCTGCTTTaGTCCAAGACTGCTTGGCCTAAAACAAACAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SSRRLARRTNLL*SKTAWPKTNKQ Trigger: TTGTTTGTTTGTTTTAGGCCAAGCAGTCTTGGAGCAAAGCAGATTAGTTCTTCTCGCCAACCTTCTTGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR GCA 72 bp | AGAACGTCAGGCAGACTTTTCAATGTGATCCAGTTTTaGACAGTCACTGGAGTGTCGCGTCATGAATTATTA | + |
|
Preference number: 3 (lower is better) Translates to: RTSGRLFNVIQF*TVTGVSRHELL Trigger: TAATAATTCATGACGCGACACTCCAGTGACTGTGCAAAACTGGATCACATTGAAAAGTCTGCCTGACGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGGTGTTTAAAGGAACAGAAACGACATCATGCATCGGTTACTTTTGCCCTCACTGTGACCATATCTaGTCACTTCCTAACCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IQVFKGTETTSCIGYFCPHCDHI*SLPNQN Trigger: GTTTTGGTTAGGAAGTGACAAGATATGGTCACAGTG...AGGGCAAAAGTAACCGATGCATGATGTCGTTTCTGTTCCTTTAAACACCTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR GCA 72 bp | AAAGGAACAGAAACGACATCATGCATCGGTTACTTTTaGCCTTTGTACATCAGAACTAAGTGCTCAGATATC | + |
|
Preference number: 3 (lower is better) Translates to: KGTETTSCIGYF*PLYIRTKCSDI Trigger: GATATCTGAGCACTTAGTTCTGATGTACAAAGGGCAAAAGTAACCGATGCATGATGTCGTTTCTGTTCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR CCA 72 bp | CCAAACCTTCATAATTACAGGGAAATGGAAGCAACTTaGCCACTTTTTGGCAAATCGCTTCATCTTTGTACT | + |
|
Preference number: 3 (lower is better) Translates to: PNLHNYREMEAT*PLFGKSLHLCT Trigger: AGTACAAAGATGAAGCGATTTGCCAAAAAGTGGCCAAGTTGCTTCCATTTCCCTGTAATTATGAAGGTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| 3UTR GCA 72 bp | TTTATTCAGGTGTTTAAAGGAACAGAAACGACATCATaGATCGGTTACTTTTGCCCTTTGTACATCAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: FIQVFKGTETTS*IGYFCPLYIRT Trigger: AGTTCTGATGTACAAAGGGCAAAAGTAACCGATGCATGATGTCGTTTCTGTTCCTTTAAACACCTGAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | CTCGCTTCCCCTGCCAGGTCCTTGAGGAGGCAGCTACTCCTTGTGGTTCAGAGGGGGTTCCTTGGCCCCTaGCTCCTGGTCAGAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LASPARSLRRQLLLVVQRGFLGP*LLVRGP Trigger: GGGGCCTCTGACCAGGAGCCAGGGGCCAAGGAACCC...CCTCTGAACCACAAGGAGTAGCTGCCTCCTCAAGGACCTGGCAGGGGAAGCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAGCTCTCAACCAGCTGCAGGTCTCGCTTCCCCTGCCAGGTCCTTGAGGGGCCGGGACTGCTGCTaGTGGATGGCAGGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSSQPAAGLASPARSLRGRDCC*WMAGGW Trigger: CCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCC...CCTCAAGGACCTGGCAGGGGAAGCGAGACCTGCAGCTGGTTGAGAGCTGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | AGTCACCTACAGTTCCAGCTCCAGAGGATCCAATGCCCTCTTCTAGCCTCCAGGGTGCGTCCCAGGCTCTaGTGGGCCTCCAGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLQFQLQRIQCPLLASRVRPRL*WASRAS Trigger: GGAGGCCCTGGAGGCCCAGCAGAGCCTGGGACGCAC...CCTGGAGGCTAGAAGAGGGCATTGGATCCTCTGGAGCTGGAACTGTAGGTGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | GGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGCAGGACCGGGCCGTGCGTCCCAGGCTCTaGTGGGCCTCCAGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNIITKSHQQPQPLQDRAVRPRL*WASRAS Trigger: GGAGGCCCTGGAGGCCCAGCAGAGCCTGGGACGCAC...GGCCCGGTCCTGCAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | CTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTTCAGGGACCGTGCGTCCCAGGCTCTaGTGGGCCTCCAGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTGDMKTGGSSGHISGTVRPRL*WASRAS Trigger: GGAGGCCCTGGAGGCCCAGCAGAGCCTGGGACGCAC...GGTCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGAGGCAGATGGCCTGGAAGCGGGGCCTCTCGATTATCAGAACTGAAACGACTGGAGGCGCCTGCTTaGAAGCAGGGCCGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGGRWPGSGASRLSELKRLEAPA*KQGRDC Trigger: GCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAG...TCGTTTCAGTTCTGATAATCGAGAGGCCCCGCTTCCAGGCCATCTGCCTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACGTGCGTCCCAGGCTCTaGTGGGCCTCCAGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSRAFAALPEDLTSVPSNVRPRL*WASRAS Trigger: GGAGGCCCTGGAGGCCCAGCAGAGCCTGGGACGCAC...GTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCGTGCGTCCCAGGCTCTaGTGGGCCTCCAGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTVRPRL*WASRAS Trigger: GGAGGCCCTGGAGGCCCAGCAGAGCCTGGGACGCAC...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGGCAGATGGCCTGGAAGCGGGGCCTCTCGATTATCAGAACTGAAACGACAGGGCCGGGACTGCTaGTGGTGGATGGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGGRWPGSGASRLSELKRQGRDC*WWMAGG Trigger: ACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTG...TCGTTTCAGTTCTGATAATCGAGAGGCCCCGCTTCCAGGCCATCTGCCTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACCTACAGTTCCAGCTCCAGAGGATCCAATGCCCTCTTCTAGCCTCCAGGGGGTTCCTTGGCCCCTaGCTCCTGGTCAGAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLQFQLQRIQCPLLASRGFLGP*LLVRGP Trigger: GGGGCCTCTGACCAGGAGCCAGGGGCCAAGGAACCC...CCTGGAGGCTAGAAGAGGGCATTGGATCCTCTGGAGCTGGAACTGTAGGTGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CCA 90 bp | TCACCCTCTCTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTGCAGGGCAGCCACGCTaGCCGTGCGGTTGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSLHTGDMKTGGSSGHIAGQPR*PCGCSG Trigger: GCCAGAGCAACCGCACGGCCAGCGTGGCTGCCCTGC...AATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAGAGAGGGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | CTACAGTTCCAGCTCCAGAGGATCCAATGCCCTCTTCTAGCCTCCAGGGGTTCCCGGTGGTGTCACCTCTaGCATGGGTTCCTTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQFQLQRIQCPLLASRGSRWCHL*HGFLGP Trigger: GGGGCCAAGGAACCCATGGCAGAGGTGACACCACCG...GGAACCCCTGGAGGCTAGAAGAGGGCATTGGATCCTCTGGAGCTGGAACTGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | AGGGGAGGCAGATGGCCTGGAAGCGGGGCCTCTCGATTATCAGAACTGAAACGACGGTGGTGTCACCTCTaGCATGGGTTCCTTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGGRWPGSGASRLSELKRRWCHL*HGFLGP Trigger: GGGGCCAAGGAACCCATGGCAGAGGTGACACCACCG...TCGTTTCAGTTCTGATAATCGAGAGGCCCCGCTTCCAGGCCATCTGCCTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | GGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGCAGGACCGGGCCCAGGGCCGGGACTGCTaGTGGTGGATGGCAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GNIITKSHQQPQPLQDRAQGRDC*WWMAGG Trigger: ACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTG...GGCCCGGTCCTGCAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACGGGTTCCTTGGCCCCTaGCTCCTGGTCAGAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSRAFAALPEDLTSVPSNGFLGP*LLVRGP Trigger: GGGGCCTCTGACCAGGAGCCAGGGGCCAAGGAACCC...GTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS-3UTR CCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCGGGTTCCTTGGCCCCTaGCTCCTGGTCAGAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTGFLGP*LLVRGP Trigger: GGGGCCTCTGACCAGGAGCCAGGGGCCAAGGAACCC...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| CDS-3UTR CCA 90 bp | GGGGCCACAGAACTGACAACCTGTCTGACTGGGCCAGGGGAACCTGCTAGGATCGAGTCCCATCGGGTCTaGGACACAGCAAGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GATELTTCLTGPGEPARIESHRV*DTARAQ Trigger: CTGTGCTCTTGCTGTGTCCCAGACCCGATGGGACTC...GATCCTAGCAGGTTCCCCTGGCCCAGTCAGACAGGTTGTCAGTTCTGTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | GGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGCAGGACCGGGCCGGGGAGGTCTTGTCCTaGCTGCCTTCTGGAGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GNIITKSHQQPQPLQDRAGEVLS*LPSGGA Trigger: GGCGCCTCCAGAAGGCAGCCAGGACAAGACCTCCCC...GGCCCGGTCCTGCAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGCTCTCAACCAGCTGCAGGTCTCGCTTCCCCTGCCAGGTCCTTGAGGGCTCTGTTCCTTGGTTaGGGAGGTCTTGTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSSQPAAGLASPARSLRALFLG*GGLVLA Trigger: AGCCAGGACAAGACCTCCCCAACCAAGGAACAGAGC...CCTCAAGGACCTGGCAGGGGAAGCGAGACCTGCAGCTGGTTGAGAGCTGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | CTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTTCAGGGACCCGGTGGTGTCACCTCTaGCATGGGTTCCTTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTGDMKTGGSSGHISGTRWCHL*HGFLGP Trigger: GGGGCCAAGGAACCCATGGCAGAGGTGACACCACCG...GGTCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCCAGGGCCTCCTTCTTaGTCCGGGTCTGGTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSRAFAALPEDLTSVPSNPGPPS*SGSGPL Trigger: CAGGGGACCAGACCCGGAGCAAGAAGGAGGCCCTGG...GTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCCCAGGGCCTCCTTCTTaGTCCGGGTCTGGTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTPGPPS*SGSGPL Trigger: CAGGGGACCAGACCCGGAGCAAGAAGGAGGCCCTGG...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
||
| CDS-3UTR CCA 90 bp | AGTCACCTACAGTTCCAGCTCCAGAGGATCCAATGCCCTCTTCTAGCCTCCAGGTTGGCCCCTGGCTCCTaGTCAGAGGCCCCTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHLQFQLQRIQCPLLASRLAPGS*SEAPLS Trigger: AGAGAGAGGGGCCTCTGACCAGGAGCCAGGGGCCAA...CCTGGAGGCTAGAAGAGGGCATTGGATCCTCTGGAGCTGGAACTGTAGGTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CCA 90 bp | CCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTGGCGAGGGTTCCTTGGCCCCTaGCTCCTGGTCAGAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PWPLELTRPSQIAQEGWRGFLGP*LLVRGP Trigger: GGGGCCTCTGACCAGGAGCCAGGGGCCAAGGAACCC...TCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACCTACAGTTCCAGCTCCAGAGGATCCAATGCCCTCTTCTAGCCTCCAGGCTGCCATGGGTTCCTTaGCCCCTGGCTCCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHLQFQLQRIQCPLLASRLPWVP*PLAPGQ Trigger: CTGACCAGGAGCCAGGGGCCAAGGAACCCATGGCAG...CCTGGAGGCTAGAAGAGGGCATTGGATCCTCTGGAGCTGGAACTGTAGGTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CCA 90 bp | CTACAGTTCCAGCTCCAGAGGATCCAATGCCCTCTTCTAGCCTCCAGGGGTTCCGTTCCTCACTGGCGGTaGTGTCACCTCTGCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQFQLQRIQCPLLASRGSVPHWR*CHLCHG Trigger: CCCATGGCAGAGGTGACACCACCGCCAGTGAGGAAC...GGAACCCCTGGAGGCTAGAAGAGGGCATTGGATCCTCTGGAGCTGGAACTGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CCA 90 bp | CTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTTCAGGGACCGGGCCTGGGCATACGTaGCTGTGTTCAGGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHTGDMKTGGSSGHISGTGPGHT*LCSGGS Trigger: GGACCCTCCTGAACACAGCCACGTATGCCCAGGCCC...GGTCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | GGAATGATCCATGCCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAGCAGGGCAGCCACGCTaGCCGTGCGGTTGCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GMIHAMAPGIDKTFSDSSAGQPR*PCGCSG Trigger: GCCAGAGCAACCGCACGGCCAGCGTGGCTGCCCTGC...TGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGGCATGGATCATTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | GGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGCAGGACCGGGCCCGGGACTGCTGCTGGTaGATGGCAGGAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNIITKSHQQPQPLQDRARDCCW*MAGGWQ Trigger: CTGCCAACCTCCTGCCATCCACCAGCAGCAGTCCCG...GGCCCGGTCCTGCAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | TCACCCTCTCTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTGGCCGGGACTGCTGCTaGTGGATGGCAGGAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSLHTGDMKTGGSSGHIGRDCC*WMAGGW Trigger: CCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCC...AATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAGAGAGGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | ACTGGGCCAGGGGAACCTGCTAGGATCAGGACCACTGTGACCATATCTTGTCACGTCCTGGCTGCCTTCTaGAGGCGCCTGCTTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGPGEPARIRTTVTISCHVLAAF*RRLLGS Trigger: GCTTCCAAGCAGGCGCCTCCAGAAGGCAGCCAGGAC...GTGACAAGATATGGTCACAGTGGTCCTGATCCTAGCAGGTTCCCCTGGCCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | CTCGCTTCCCCTGCCAGGTCCTTGAGGAGGCAGCTACTCCTTGTGGTTCAGAGGCCTCGCTCTGTTCCTTaGTTGGGGAGGTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LASPARSLRRQLLLVVQRPRSVP*LGRSCP Trigger: AGGACAAGACCTCCCCAACCAAGGAACAGAGCGAGG...CCTCTGAACCACAAGGAGTAGCTGCCTCCTCAAGGACCTGGCAGGGGAAGCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR TCA 90 bp | CTCGCTTCCCCTGCCAGGTCCTTGAGGAGGCAGCTACTCCTTGTGGTTCAGAGGAGAGCTTCCAGCTGCTaGAGAGTGAAGGTCGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LASPARSLRRQLLLVVQRRASSC*RVKVVR Trigger: TCGAACGACCTTCACTCTTCAGCAGCTGGAAGCTCT...CCTCTGAACCACAAGGAGTAGCTGCCTCCTCAAGGACCTGGCAGGGGAAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCAGCTCTCAACCAGCTGCAGGTCTCGCTTCCCCTGCCAGGTCCTTGAGGTTCTGGAACCAAACCTaGACTCTGGCTTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSSQPAAGLASPARSLRFWNQT*TLASVR Trigger: CCTCACAGAAGCCAGAGTGCAGGTTTGGTTCCAGAA...CCTCAAGGACCTGGCAGGGGAAGCGAGACCTGCAGCTGGTTGAGAGCTGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR GCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCCGGTGGTGTCACCTCTaGCATGGGTTCCTTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTRWCHL*HGFLGP Trigger: GGGGCCAAGGAACCCATGGCAGAGGTGACACCACCG...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| CDS-3UTR GCA 90 bp | GCTATTGCACATCTCCCTCTGATCTCTCCGAGGTCACCATCTGCATGGAAGAACCCAGGGCCTCCTTCTTaGTCCGGGTCTGGTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIAHLPLISPRSPSAWKNPGPPS*SGSGPL Trigger: CAGGGGACCAGACCCGGAGCAAGAAGGAGGCCCTGG...GTTCTTCCATGCAGATGGTGACCTCGGAGAGATCAGAGGGAGATGTGCAATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR GCA 90 bp | ATATTTCAGGGACCTTCCTGGGGATTTCCTCCCACTTCTGGGGCTCTTGTCCTTCAGCCACGCTGGCCGTaGGGTTGCTCTGGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IFQGPSWGFPPTSGALVLQPRWP*GCSGSH Trigger: ATGGCTGCCAGAGCAACCGCACGGCCAGCGTGGCTG...AAGGACAAGAGCCCCAGAAGTGGGAGGAAATCCCCAGGAAGGTCCCTGAAATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR GCA 90 bp | TTGCAGGACCGGGCCAGGAGAGGGGCACACGCTATTGCACATCTCCCTCTGATCAGGAGGTTGGCAGACTaGAGGACAGCTTCTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LQDRARRGAHAIAHLPLIRRLAD*RTASEC Trigger: GCATTCAGAAGCTGTCCTGCAGTCTGCCAACCTCCT...GATCAGAGGGAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCGGTCCTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | AGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCTGCCATGGGTTCCTTaGCCCCTGGCTCCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSRAFAALPEDLTSVPSNLPWVP*PLAPGQ Trigger: CTGACCAGGAGCCAGGGGCCAAGGAACCCATGGCAG...GTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS-3UTR CCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCCTGCCATGGGTTCCTTaGCCCCTGGCTCCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTLPWVP*PLAPGQ Trigger: CTGACCAGGAGCCAGGGGCCAAGGAACCCATGGCAG...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| CDS-3UTR CCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCGGGCCTGGGCATACGTaGCTGTGTTCAGGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTGPGHT*LCSGGS Trigger: GGACCCTCCTGAACACAGCCACGTATGCCCAGGCCC...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| CDS-3UTR CCA 90 bp | AAGCAATGTGGGAGCGACTCATTTCCTGTCATGAGATGCCACTTCTGGGCATCTCTGGAGGCGCCTGCTTaGAAGCAGGGCCGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQCGSDSFPVMRCHFWASLEAPA*KQGRDC Trigger: GCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAG...AGATGCCCAGAAGTGGCATCTCATGACAGGAAATGAGTCGCTCCCACATTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR GCA 90 bp | ATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTCGGTGGTGTCACCTCTaGCATGGGTTCCTTGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MVMSPRSRAFAALPEDLTRWCHL*HGFLGP Trigger: GGGGCCAAGGAACCCATGGCAGAGGTGACACCACCG...AGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS-3UTR GCA 90 bp | CCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTGGCGACGCTGGCCGTGCGGTTaGTCTGGCAGCCATAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PWPLELTRPSQIAQEGWRRWPCG*SGSHKW Trigger: CCACTTATGGCTGCCAGAGCAACCGCACGGCCAGCG...TCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR GCA 90 bp | ATATTTCAGGGACCTTCCTGGGGATTTCCTCCCACTTCTGGGGCTCTTGTCCTTCGCTGGCCGTGCGGTTaGTCTGGCAGCCATAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFQGPSWGFPPTSGALVLRWPCG*SGSHKW Trigger: CCACTTATGGCTGCCAGAGCAACCGCACGGCCAGCG...AAGGACAAGAGCCCCAGAAGTGGGAGGAAATCCCCAGGAAGGTCCCTGAAATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR GCA 90 bp | CTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTTCAGGGACCAGGACAGCTTCTGAATaGTCGCGGGCCTTCATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTGDMKTGGSSGHISGTRTASE*SRAFMR Trigger: GCGCATGAAGGCCCGCGAGCATTCAGAAGCTGTCCT...GGTCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCGTTCCTCACTGGCGGTaGTGTCACCTCTGCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTVPHWR*CHLCHG Trigger: CCCATGGCAGAGGTGACACCACCGCCAGTGAGGAAC...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| CDS-3UTR CCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCCCGGGTCTGGTCCCCTaGGGGTGGAGAGTTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTPGLVP*GWRVDV Trigger: AACATCAACTCTCCACCCCCAGGGGACCAGACCCGG...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCCGGGTCTGGTCCCCTaGGGGTGGAGAGTTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSRAFAALPEDLTSVPSNPGLVP*GWRVDV Trigger: AACATCAACTCTCCACCCCCAGGGGACCAGACCCGG...GTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CCA 90 bp | CCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTGGCGAGGGCCTGGGCATACGTaGCTGTGTTCAGGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PWPLELTRPSQIAQEGWRGPGHT*LCSGGS Trigger: GGACCCTCCTGAACACAGCCACGTATGCCCAGGCCC...TCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | GGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGCAGGACCGGGCCACTGCTGCTGGTGGATaGCAGGAGGTTGGCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: GNIITKSHQQPQPLQDRATAAGG*QEVGRL Trigger: CAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGT...GGCCCGGTCCTGCAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR TCA 90 bp | CGGGCCAGGAGAGGGGCACACGCTATTGCACATCTCCCTCTGATCTCTCCGAGGGCACTCTGGCTTCTGTaGGGTTTATTTTCATGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RARRGAHAIAHLPLISPRALWLL*GLFSWL Trigger: TAGCCATGAAAATAAACCTCACAGAAGCCAGAGTGC...CCTCGGAGAGATCAGAGGGAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | TTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTGGCGAGAAGAACTAATCTGCGCTCGCGGGCCTTCATaGGCAGGGCAGCCACGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTRPSQIAQEGWREELICARGPS*AGQPRW Trigger: CCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGC...GCAGATTAGTTCTTCTCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | CGGGCCAGGAGAGGGGCACACGCTATTGCACATCTCCCTCTGATCTCTCCGAGGTCTGGTGAAGACATCTaGGTAGTGTGTTTGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RARRGAHAIAHLPLISPRSGEDI*VVCLGK Trigger: TTTGCCCAAACACACTACCCAGATGTCTTCACCAGA...CCTCGGAGAGATCAGAGGGAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | GGAATGATCCATGCCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCACTGCCATGGGTTCCTTaGCCCCTGGCTCCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GMIHAMAPGIDKTFSDSSLPWVP*PLAPGQ Trigger: CTGACCAGGAGCCAGGGGCCAAGGAACCCATGGCAG...TGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGGCATGGATCATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAATGTGGGAGCGACTCATTTCCTGTCATGAGATGCCACTTCTGGGCATCTCTGCCATGGGTTCCTTaGCCCCTGGCTCCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQCGSDSFPVMRCHFWASLPWVP*PLAPGQ Trigger: CTGACCAGGAGCCAGGGGCCAAGGAACCCATGGCAG...AGATGCCCAGAAGTGGCATCTCATGACAGGAAATGAGTCGCTCCCACATTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | GCTATTGCACATCTCCCTCTGATCTCTCCGAGGTCACCATCTGCATGGAAGAACGTTCCTCACTGGCGGTaGTGTCACCTCTGCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIAHLPLISPRSPSAWKNVPHWR*CHLCHG Trigger: CCCATGGCAGAGGTGACACCACCGCCAGTGAGGAAC...GTTCTTCCATGCAGATGGTGACCTCGGAGAGATCAGAGGGAGATGTGCAATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGGCCAGGGGAACCTGCTAGGATCAGGACCACTGTGACCATATCTTGTCACGTTGATGTTCCTCACTaGCGGTGGTGTCACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGPGEPARIRTTVTISCHVDVPH*RWCHLC Trigger: GCAGAGGTGACACCACCGCCAGTGAGGAACATCAAC...GTGACAAGATATGGTCACAGTGGTCCTGATCCTAGCAGGTTCCCCTGGCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | AGTCACCTACAGTTCCAGCTCCAGAGGATCCAATGCCCTCTTCTAGCCTCCAGGGTTGATGTTCCTCACTaGCGGTGGTGTCACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLQFQLQRIQCPLLASRVDVPH*RWCHLC Trigger: GCAGAGGTGACACCACCGCCAGTGAGGAACATCAAC...CCTGGAGGCTAGAAGAGGGCATTGGATCCTCTGGAGCTGGAACTGTAGGTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCGTTCAGGAGGGTCCCTaGCAAGCAGGAGGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTVQEGP*QAGGEE Trigger: TTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAAC...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| CDS-3UTR CCA 90 bp | CTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTTCAGGGACCACAGCAAGAGCACAGTaGGCCCCCTTTCAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTGDMKTGGSSGHISGTTARAQ*APFQRC Trigger: GCATCTCTGAAAGGGGGCCCACTGTGCTCTTGCTGT...GGTCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTTTGTGTGGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGGGGGAGGTCTTGTCCTaGCTGCCTTCTGGAGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCLCGNIITKSHQQPQPLGEVLS*LPSGGA Trigger: GGCGCCTCCAGAAGGCAGCCAGGACAAGACCTCCCC...CAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCCACACAAACAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| 3UTR CAA 72 bp | AACATCATCACCAAAAGCCACCAACAACCACAACCCTaGCAGGACCGGGCCAGGAGAGGGGCACACGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: NIITKSHQQPQP*QDRARRGAHAI Trigger: AATAGCGTGTGCCCCTCTCCTGGCCCGGTCCTGCAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR TCA 90 bp | CTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTTCAGGGACCAGAGCTTCCAGCTGCTaGAGAGTGAAGGTCGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LHTGDMKTGGSSGHISGTRASSC*RVKVVR Trigger: TCGAACGACCTTCACTCTTCAGCAGCTGGAAGCTCT...GGTCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACGGGTCTGTTCCCCTCTaGACCCAAAGCTTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSRAFAALPEDLTSVPSNGSVPL*TQSFQN Trigger: GTTCTGGAAGCTTTGGGTTCAGAGGGGAACAGACCC...GTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR TCA 90 bp | CCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTGGCGACTGCAGGACAGCTTCTaGATGCTCGCGGGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PWPLELTRPSQIAQEGWRLQDSF*MLAGLH Trigger: ATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAG...TCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGGCCAGGGGAACCTGCTAGGATCAGGACCACTGTGACCATATCTTGTCACTGTTTGGGCAAAGACTaGCTCCAGAGCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TGPGEPARIRTTVTISCHCLGKD*LQSFQL Trigger: CAGCTGGAAGCTCTGGAGGCAGTCTTTGCCCAAACA...GTGACAAGATATGGTCACAGTGGTCCTGATCCTAGCAGGTTCCCCTGGCCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | GAAAATGATGGCGATATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTCCAGGGCCTCCTTCTTaGTCCGGGTCTGGTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENDGDMVMSPRSRAFAALPGPPS*SGSGPL Trigger: CAGGGGACCAGACCCGGAGCAAGAAGGAGGCCCTGG...AAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAACTTGGCCACTTTTTGGCAAATCGCTTCATCTTTGTACTCAACAAGGCTCGCGGGCCTTCATaGGCAGGGCAGCCACGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WKQLGHFLANRFIFVLNKARGPS*AGQPRW Trigger: CCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGC...CTTGTTGAGTACAAAGATGAAGCGATTTGCCAAAAAGTGGCCAAGTTGCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCGGTTCCTTTCAGAGATaGCACATGGGACAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTGSFQR*HMGQGL Trigger: CAGGCCCTGTCCCATGTGGCATCTCTGAAAGGAACC...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228878.2 |
||
| CDS-3UTR CCA 90 bp | GGAATGATCCATGCCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAGTTCCTCACTGGCGGTaGTGTCACCTCTGCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GMIHAMAPGIDKTFSDSSVPHWR*CHLCHG Trigger: CCCATGGCAGAGGTGACACCACCGCCAGTGAGGAAC...TGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGGCATGGATCATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCGTTGATGTTCCTCACTaGCGGTGGTGTCACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTVDVPH*RWCHLC Trigger: GCAGAGGTGACACCACCGCCAGTGAGGAACATCAAC...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
||
| CDS-3UTR CCA 90 bp | ATATTTCAGGGACCTTCCTGGGGATTTCCTCCCACTTCTGGGGCTCTTGTCCTTGTTCAGGAGGGTCCCTaGCAAGCAGGAGGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IFQGPSWGFPPTSGALVLVQEGP*QAGGEE Trigger: TTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAAC...AAGGACAAGAGCCCCAGAAGTGGGAGGAAATCCCCAGGAAGGTCCCTGAAATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | GCTATTGCACATCTCCCTCTGATCTCTCCGAGGTCACCATCTGCATGGAAGAACGTTCAGGAGGGTCCCTaGCAAGCAGGAGGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AIAHLPLISPRSPSAWKNVQEGP*QAGGEE Trigger: TTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAAC...GTTCTTCCATGCAGATGGTGACCTCGGAGAGATCAGAGGGAGATGTGCAATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | CCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTGGCGAGAGTCCCATCGGGTCTaGGACACAGCAAGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PWPLELTRPSQIAQEGWRESHRV*DTARAQ Trigger: CTGTGCTCTTGCTGTGTCCCAGACCCGATGGGACTC...TCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR TCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCAGAGCTTCCAGCTGCTaGAGAGTGAAGGTCGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTRASSC*RVKVVR Trigger: TCGAACGACCTTCACTCTTCAGCAGCTGGAAGCTCT...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCTGTTTGGGCAAAGACTaGCTCCAGAGCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTCLGKD*LQSFQL Trigger: CAGCTGGAAGCTCTGGAGGCAGTCTTTGCCCAAACA...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| CDS-3UTR GCA 90 bp | GGCTGTTTGTGTGGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGGCCCCCTTTCAGAGATaGCACATGGGACAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCLCGNIITKSHQQPQPLAPFQR*HMGQGL Trigger: CAGGCCCTGTCCCATGTGGCATCTCTGAAAGGGGGC...CAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCCACACAAACAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR GCA 90 bp | AAGCAATGTGGGAGCGACTCATTTCCTGTCATGAGATGCCACTTCTGGGCATCTAGGACAGCTTCTGAATaGTCGCGGGCCTTCATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KQCGSDSFPVMRCHFWASRTASE*SRAFMR Trigger: GCGCATGAAGGCCCGCGAGCATTCAGAAGCTGTCCT...AGATGCCCAGAAGTGGCATCTCATGACAGGAAATGAGTCGCTCCCACATTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR GCA 90 bp | TCACCCTCTCTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTAGGAGGTTGGCAGACTaGAGGACAGCTTCTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSLHTGDMKTGGSSGHIRRLAD*RTASEC Trigger: GCATTCAGAAGCTGTCCTGCAGTCTGCCAACCTCCT...AATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAGAGAGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | CTTTCTGGTCCACTGTCTGTCAGAAATGTAACTAGTCCACACAGTGTGGCTGTCGTTCCTCACTGGCGGTaGTGTCACCTCTGCCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGPLSVRNVTSPHSVAVVPHWR*CHLCHG Trigger: CCCATGGCAGAGGTGACACCACCGCCAGTGAGGAAC...GACAGCCACACTGTGTGGACTAGTTACATTTCTGACAGACAGTGGACCAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS-3UTR CCA 90 bp | CCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTGGCGAGTTGATGTTCCTCACTaGCGGTGGTGTCACCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PWPLELTRPSQIAQEGWRVDVPH*RWCHLC Trigger: GCAGAGGTGACACCACCGCCAGTGAGGAACATCAAC...TCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | GAAAATGATGGCGATATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTGGGCCTGGGCATACGTaGCTGTGTTCAGGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ENDGDMVMSPRSRAFAALGPGHT*LCSGGS Trigger: GGACCCTCCTGAACACAGCCACGTATGCCCAGGCCC...AAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS-3UTR CCA 90 bp | ATATTTCAGGGACCTTCCTGGGGATTTCCTCCCACTTCTGGGGCTCTTGTCCTTGCTCTGTTCCTTGGTTaGGGAGGTCTTGTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFQGPSWGFPPTSGALVLALFLG*GGLVLA Trigger: AGCCAGGACAAGACCTCCCCAACCAAGGAACAGAGC...AAGGACAAGAGCCCCAGAAGTGGGAGGAAATCCCCAGGAAGGTCCCTGAAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CCA 90 bp | CCGCCACACGGAGTCATCTTACTGGGTTTCCTGTCTTGTCACCCTCTCTACATACCTCGCTCTGTTCCTTaGTTGGGGAGGTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPHGVILLGFLSCHPLYIPRSVP*LGRSCP Trigger: AGGACAAGACCTCCCCAACCAAGGAACAGAGCGAGG...TATGTAGAGAGGGTGACAAGACAGGAAACCCAGTAAGATGACTCCGTGTGGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR TCA 90 bp | ATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTAGAGCTTCCAGCTGCTaGAGAGTGAAGGTCGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: MVMSPRSRAFAALPEDLTRASSC*RVKVVR Trigger: TCGAACGACCTTCACTCTTCAGCAGCTGGAAGCTCT...AGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS-3UTR TCA 90 bp | CTACAGTTCCAGCTCCAGAGGATCCAATGCCCTCTTCTAGCCTCCAGGGGTTCCGCACTCTGGCTTCTGTaGGGTTTATTTTCATGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LQFQLQRIQCPLLASRGSALWLL*GLFSWL Trigger: TAGCCATGAAAATAAACCTCACAGAAGCCAGAGTGC...GGAACCCCTGGAGGCTAGAAGAGGGCATTGGATCCTCTGGAGCTGGAACTGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS-3UTR GCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCTTCTGGAACCAAACCTaGACTCTGGCTTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTFWNQT*TLASVR Trigger: CCTCACAGAAGCCAGAGTGCAGGTTTGGTTCCAGAA...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| CDS-3UTR CCA 90 bp | CTTTCTGGTCCACTGTCTGTCAGAAATGTAACTAGTCCACACAGTGTGGCTGTCGTTCAGGAGGGTCCCTaGCAAGCAGGAGGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSGPLSVRNVTSPHSVAVVQEGP*QAGGEE Trigger: TTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAAC...GACAGCCACACTGTGTGGACTAGTTACATTTCTGACAGACAGTGGACCAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS-3UTR CCA 90 bp | TTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTGGCGAGAAGAACTAATCTGCCGGGACTGCTGCTGGTaGATGGCAGGAGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTRPSQIAQEGWREELICRDCCW*MAGGWQ Trigger: CTGCCAACCTCCTGCCATCCACCAGCAGCAGTCCCG...GCAGATTAGTTCTTCTCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | GGAATGATCCATGCCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCATGTTTGGGCAAAGACTaGCTCCAGAGCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GMIHAMAPGIDKTFSDSSCLGKD*LQSFQL Trigger: CAGCTGGAAGCTCTGGAGGCAGTCTTTGCCCAAACA...TGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGGCATGGATCATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTTCTGGAACCAAACCTaGACTCTGGCTTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MVMSPRSRAFAALPEDLTFWNQT*TLASVR Trigger: CCTCACAGAAGCCAGAGTGCAGGTTTGGTTCCAGAA...AGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | CCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTGGCGATTCTGGAACCAAACCTaGACTCTGGCTTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PWPLELTRPSQIAQEGWRFWNQT*TLASVR Trigger: CCTCACAGAAGCCAGAGTGCAGGTTTGGTTCCAGAA...TCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTATGATCTTTCAGAGATaGCACATGGGACAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: MVMSPRSRAFAALPEDLTMIFQR*HMGQGL Trigger: CAGGCCCTGTCCCATGTGGCATCTCTGAAAGATCAT...AGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | AGCAATGGCTGTTTGTGTGGAAACATCATCACCAAAAGCCACCAACAACCACAAGCCCCCTTTCAGAGATaGCACATGGGACAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SNGCLCGNIITKSHQQPQAPFQR*HMGQGL Trigger: CAGGCCCTGTCCCATGTGGCATCTCTGAAAGGGGGC...TTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCCACACAAACAGCCATTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | AGCAATGGCTGTTTGTGTGGAAACATCATCACCAAAAGCCACCAACAACCACAACCGGGTCTGGTCCCCTaGGGGTGGAGAGTTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SNGCLCGNIITKSHQQPQPGLVP*GWRVDV Trigger: AACATCAACTCTCCACCCCCAGGGGACCAGACCCGG...TTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCCACACAAACAGCCATTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | GAAAATGATGGCGATATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTGTTCAGGAGGGTCCCTaGCAAGCAGGAGGGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ENDGDMVMSPRSRAFAALVQEGP*QAGGEE Trigger: TTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAAC...AAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAACTTGGCCACTTTTTGGCAAATCGCTTCATCTTTGTACTCAACAAGGTCCTGGCTGCCTTCTaGAGGCGCCTGCTTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WKQLGHFLANRFIFVLNKVLAAF*RRLLGS Trigger: GCTTCCAAGCAGGCGCCTCCAGAAGGCAGCCAGGAC...CTTGTTGAGTACAAAGATGAAGCGATTTGCCAAAAAGTGGCCAAGTTGCTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCTGGTCCACTGTCTGTCAGAAATGTAACTAGTCCACACAGTGTGGCTGTCAGAGCTTCCAGCTGCTaGAGAGTGAAGGTCGTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSGPLSVRNVTSPHSVAVRASSC*RVKVVR Trigger: TCGAACGACCTTCACTCTTCAGCAGCTGGAAGCTCT...GACAGCCACACTGTGTGGACTAGTTACATTTCTGACAGACAGTGGACCAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR TCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCGCACTCTGGCTTCTGTaGGGTTTATTTTCATGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTALWLL*GLFSWL Trigger: TAGCCATGAAAATAAACCTCACAGAAGCCAGAGTGC...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
||
| CDS-3UTR TCA 90 bp | GAAAATGATGGCGATATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTGGGTCTGTTCCCCTCTaGACCCAAAGCTTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ENDGDMVMSPRSRAFAALGSVPL*TQSFQN Trigger: GTTCTGGAAGCTTTGGGTTCAGAGGGGAACAGACCC...AAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | CTTTCTGGTCCACTGTCTGTCAGAAATGTAACTAGTCCACACAGTGTGGCTGTCTGTTTGGGCAAAGACTaGCTCCAGAGCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGPLSVRNVTSPHSVAVCLGKD*LQSFQL Trigger: CAGCTGGAAGCTCTGGAGGCAGTCTTTGCCCAAACA...GACAGCCACACTGTGTGGACTAGTTACATTTCTGACAGACAGTGGACCAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CCA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCTCTGGTGAAGACATCTaGGTAGTGTGTTTGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RAFAALPEDLTSVPSNHTSGEDI*VVCLGK Trigger: TTTGCCCAAACACACTACCCAGATGTCTTCACCAGA...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| 3UTR CAA 72 bp | TGGGGATTTCCTCCCACTTCTGGGGCTCTTGTCCTTTaGTGGGCCATAAAGCTACGTTCTGAACTAGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WGFPPTSGALVL*WAIKLRSELVN Trigger: GTTCACTAGTTCAGAACGTAGCTTTATGGCCCACAAAAGGACAAGAGCCCCAGAAGTGGGAGGAAATCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | GAAAATGATGGCGATATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTTGTTTGGGCAAAGACTaGCTCCAGAGCTTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENDGDMVMSPRSRAFAALCLGKD*LQSFQL Trigger: CAGCTGGAAGCTCTGGAGGCAGTCTTTGCCCAAACA...AAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | CTTTCTGGTCCACTGTCTGTCAGAAATGTAACTAGTCCACACAGTGTGGCTGTCTTCTGGAACCAAACCTaGACTCTGGCTTCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGPLSVRNVTSPHSVAVFWNQT*TLASVR Trigger: CCTCACAGAAGCCAGAGTGCAGGTTTGGTTCCAGAA...GACAGCCACACTGTGTGGACTAGTTACATTTCTGACAGACAGTGGACCAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | TCTTGTCACTTCCTAACCAAAACCTCAGCTAATACCTTTAAACAAGAGAAAAGGCCAGGGCCTCCTTCTTaGTCCGGGTCTGGTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCHFLTKTSANTFKQEKRPGPPS*SGSGPL Trigger: CAGGGGACCAGACCCGGAGCAAGAAGGAGGCCCTGG...CCTTTTCTCTTGTTTAAAGGTATTAGCTGAGGTTTTGGTTAGGAAGTGACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | CCATGGCCCCTGGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTTGGCGATCTGGTGAAGACATCTaGGTAGTGTGTTTGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PWPLELTRPSQIAQEGWRSGEDI*VVCLGK Trigger: TTTGCCCAAACACACTACCCAGATGTCTTCACCAGA...TCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCCAGGGGCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTGACTGAAGAGAGTGAGAACTGGTTGATAGCCTATCAGTTCTGTGGTTTTACTGCTGCTGGTGGATaGCAGGAGGTTGGCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLTEESENWLIAYQFCGFTAAGG*QEVGRL Trigger: CAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGT...AAAACCACAGAACTGATAGGCTATCAACCAGTTCTCACTCTCTTCAGTCAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR GCA 90 bp | GAAAATGATGGCGATATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTATGATCTTTCAGAGATaGCACATGGGACAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENDGDMVMSPRSRAFAALMIFQR*HMGQGL Trigger: CAGGCCCTGTCCCATGTGGCATCTCTGAAAGATCAT...AAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR GCA 90 bp | AATTTGCCCAACAGTTCACTTATTTATGTACCTTTCTGGAGGAAATACGAGTTTCAGCCACGCTGGCCGTaGGGTTGCTCTGGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLPNSSLIYVPFWRKYEFQPRWP*GCSGSH Trigger: ATGGCTGCCAGAGCAACCGCACGGCCAGCGTGGCTG...AAACTCGTATTTCCTCCAGAAAGGTACATAAATAAGTGAACTGTTGGGCAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTGACTGAAGAGAGTGAGAACTGGTTGATAGCCTATCAGTTCTGTGGTTTTACAGCAAGAGCACAGTaGGCCCCCTTTCAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTEESENWLIAYQFCGFTARAQ*APFQRC Trigger: GCATCTCTGAAAGGGGGCCCACTGTGCTCTTGCTGT...AAAACCACAGAACTGATAGGCTATCAACCAGTTCTCACTCTCTTCAGTCAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CCA 90 bp | GAAAATGATGGCGATATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTTCTGGTGAAGACATCTaGGTAGTGTGTTTGGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ENDGDMVMSPRSRAFAALSGEDI*VVCLGK Trigger: TTTGCCCAAACACACTACCCAGATGTCTTCACCAGA...AAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR TCA 90 bp | AATTTGCCCAACAGTTCACTTATTTATGTACCTTTCTGGAGGAAATACGAGTTTCTGCAGGACAGCTTCTaGATGCTCGCGGGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLPNSSLIYVPFWRKYEFLQDSF*MLAGLH Trigger: ATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAG...AAACTCGTATTTCCTCCAGAAAGGTACATAAATAAGTGAACTGTTGGGCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| 3UTR CAA 72 bp | GGAATTGACAAGACCTTCTCAGATAGCTCAAGAAGGTaGGCGAGAAGAACTAATCTGCTTTGCTCCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GIDKTFSDSSRR*ARRTNLLCSKT Trigger: AGTCTTGGAGCAAAGCAGATTAGTTCTTCTCGCCAACCTTCTTGAGCTATCTGAGAAGGTCTTGTCAATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR TCA 90 bp | GTCTTGACTGAAGAGAGTGAGAACTGGTTGATAGCCTATCAGTTCTGTGGTTTTGCACTCTGGCTTCTGTaGGGTTTATTTTCATGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLTEESENWLIAYQFCGFALWLL*GLFSWL Trigger: TAGCCATGAAAATAAACCTCACAGAAGCCAGAGTGC...AAAACCACAGAACTGATAGGCTATCAACCAGTTCTCACTCTCTTCAGTCAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| 3UTR CAA 72 bp | ACAGAAACGACATCATGCATCGGTTACTTTTGCCCTTaGTACATCAGAACTAAGTGCTCAGATATCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TETTSCIGYFCP*YIRTKCSDISA Trigger: TGCAGAGATATCTGAGCACTTAGTTCTGATGTACAAAGGGCAAAAGTAACCGATGCATGATGTCGTTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| 3UTR CAA 72 bp | ATAATTACAGGGAAATGGAAGCAACTTGGCCACTTTTaGGCAAATCGCTTCATCTTTGTACTCAACAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IITGKWKQLGHF*ANRFIFVLNKQ Trigger: TTGCTTGTTGAGTACAAAGATGAAGCGATTTGCCAAAAAGTGGCCAAGTTGCTTCCATTTCCCTGTAATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
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| CDS GCA 90 bp | GCTCGCGGGCCTTCATGCGCAGGGCAGCCACGCTGGCCGTGCGGTTaGTCTGGCAGCCATAAGTGGGGAGGAAGGAGAGTCCCATCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ARGPSCAGQPRWPCG*SGSHKWGGRRVPSG Trigger: ACCCGATGGGACTCTCCTTCCTCCCCACTTATGGCTGCCAGAGCAACCGCACGGCCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS GCA 90 bp | CTGGTGGATGGCAGGAGGTTGGCAGACTGCAGGACAGCTTCTGAATaGTCGCGGGCCTTCATGCGCAGGGCAGCCACGCTGGCCGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LVDGRRLADCRTASE*SRAFMRRAATLAVR Trigger: CCGCACGGCCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAGTCTGCCAACCTCCTGCCATCCACCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS TCA 90 bp | GCTGCTGGTGGATGGCAGGAGGTTGGCAGACTGCAGGACAGCTTCTaGATGCTCGCGGGCCTTCATGCGCAGGGCAGCCACGCTGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AAGGWQEVGRLQDSF*MLAGLHAQGSHAGR Trigger: ACGGCCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAGTCTGCCAACCTCCTGCCATCCACCAGCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS GCA 90 bp | CTGAATGCTCGCGGGCCTTCATGCGCAGGGCAGCCACGCTGGCCGTaGGGTTGCTCTGGCAGCCATAAGTGGGGAGGAAGGAGAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LNARGPSCAGQPRWP*GCSGSHKWGGRRVP Trigger: TGGGACTCTCCTTCCTCCCCACTTATGGCTGCCAGAGCAACCGCACGGCCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGCATTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS GCA 90 bp | GGTTGGCAGACTGCAGGACAGCTTCTGAATGCTCGCGGGCCTTCATaGGCAGGGCAGCCACGCTGGCCGTGCGGTTGCTCTGGCAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GWQTAGQLLNARGPS*AGQPRWPCGCSGSH Trigger: ATGGCTGCCAGAGCAACCGCACGGCCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAGTCTGCCAACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS GCA 90 bp | GCAGGGCCGGGACTGCTGCTGGTGGATGGCAGGAGGTTGGCAGACTaGAGGACAGCTTCTGAATGCTCGCGGGCCTTCATGCGCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGPGLLLVDGRRLAD*RTASECSRAFMRRA Trigger: TGCCCTGCGCATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS GCA 90 bp | GGCTGCCTTCTGGAGGCGCCTGCTTGGAAGCAGGGCCGGGACTGCTaGTGGTGGATGGCAGGAGGTTGGCAGACTGCAGGACAGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GCLLEAPAWKQGRDC*WWMAGGWQTAGQLL Trigger: CAGAAGCTGTCCTGCAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGAAGGCAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS GCA 90 bp | CCTGGCTGCCTTCTGGAGGCGCCTGCTTGGAAGCAGGGCCGGGACTaGTGCTGGTGGATGGCAGGAGGTTGGCAGACTGCAGGACAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGCLLEAPAWKQGRD*CWWMAGGWQTAGQL Trigger: AAGCTGTCCTGCAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGAAGGCAGCCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS GCA 90 bp | TCCTTGGTTGGGGAGGTCTTGTCCTGGCTGCCTTCTGGAGGCGCCTaGTTGGAAGCAGGGCCGGGACTGCTGCTGGTGGATGGCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLVGEVLSWLPSGGA*LEAGPGLLLVDGRR Trigger: CCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGAAGGCAGCCAGGACAAGACCTCCCCAACCAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS CCA 90 bp | ATGGGACAGGGCCTGGGCATACGTGGCTGTGTTCAGGAGGGTCCCTaGCAAGCAGGAGGGGAAGAAAGGCCCGGTAGGGCCCACTGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: MGQGLGIRGCVQEGP*QAGGEERPGRAHCA Trigger: CGCACAGTGGGCCCTACCGGGCCTTTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAACACAGCCACGTATGCCCAGGCCCTGTCCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068938.7 ENSMUST00000186452.7 ENSMUST00000187377.7 ENSMUST00000189022.8 ENSMUST00000228878.2 |
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| CDS CCA 90 bp | GCAGGGCAGCCACGCTGGCCGTGCGGTTGCTCTGGCAGCCATAAGTaGGGAGGAAGGAGAGTCCCATCGGGTCTGGGACACAGCAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGQPRWPCGCSGSHK*GGRRVPSGLGHSKS Trigger: GCTCTTGCTGTGTCCCAGACCCGATGGGACTCTCCTTCCTCCCCACTTATGGCTGCCAGAGCAACCGCACGGCCAGCGTGGCTGCCCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS CCA 90 bp | TGGTTGGGGAGGTCTTGTCCTGGCTGCCTTCTGGAGGCGCCTGCTTaGAAGCAGGGCCGGGACTGCTGCTGGTGGATGGCAGGAGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLGRSCPGCLLEAPA*KQGRDCCWWMAGGW Trigger: CCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGAAGGCAGCCAGGACAAGACCTCCCCAACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS CCA 90 bp | CAGCTTCTGAATGCTCGCGGGCCTTCATGCGCAGGGCAGCCACGCTaGCCGTGCGGTTGCTCTGGCAGCCATAAGTGGGGAGGAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QLLNARGPSCAGQPR*PCGCSGSHKWGGRR Trigger: TCTCCTTCCTCCCCACTTATGGCTGCCAGAGCAACCGCACGGCCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGCATTCAGAAGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS CCA 90 bp | CTCGCTCTGTTCCTTGGTTGGGGAGGTCTTGTCCTGGCTGCCTTCTaGAGGCGCCTGCTTGGAAGCAGGGCCGGGACTGCTGCTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LALFLGWGGLVLAAF*RRLLGSRAGTAAGG Trigger: TCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGAAGGCAGCCAGGACAAGACCTCCCCAACCAAGGAACAGAGCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS TCA 90 bp | GGGCCTCCTTCTTGCTCCGGGTCTGGTCCCCTGGGGGTGGAGAGTTaGTGTTCCTCACTGGCGGTGGTGTCACCTCTGCCATGGGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPPSCSGSGPLGVES*CSSLAVVSPLPWVP Trigger: AGGAACCCATGGCAGAGGTGACACCACCGCCAGTGAGGAACATCAACTCTCCACCCCCAGGGGACCAGACCCGGAGCAAGAAGGAGGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068938.7 ENSMUST00000186452.7 ENSMUST00000187377.7 ENSMUST00000189022.8 ENSMUST00000228878.2 |
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| CDS CCA 90 bp | GAGCACAGTGGGCCCCCTTTCAGAGATGCCACATGGGACAGGGCCTaGGCATACGTGGCTGTGTTCAGGAGGGTCCCTGGCAAGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EHSGPPFRDATWDRA*AYVAVFRRVPGKQE Trigger: CTCCTGCTTGCCAGGGACCCTCCTGAACACAGCCACGTATGCCCAGGCCCTGTCCCATGTGGCATCTCTGAAAGGGGGCCCACTGTGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS CCA 90 bp | GCTTGGAAGCAGGGCCGGGACTGCTGCTGGTGGATGGCAGGAGGTTaGCAGACTGCAGGACAGCTTCTGAATGCTCGCGGGCCTTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: AWKQGRDCCWWMAGG*QTAGQLLNARGPSC Trigger: GCATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS CCA 90 bp | GGCCCCCTTTCAGAGATGCCACATGGGACAGGGCCTGGGCATACGTaGCTGTGTTCAGGAGGGTCCCTGGCAAGCAGGAGGGGAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPLSEMPHGTGPGHT*LCSGGSLASRRGRK Trigger: CTTTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAACACAGCCACGTATGCCCAGGCCCTGTCCCATGTGGCATCTCTGAAAGGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS CCA 90 bp | TGCCTTCTGGAGGCGCCTGCTTGGAAGCAGGGCCGGGACTGCTGCTaGTGGATGGCAGGAGGTTGGCAGACTGCAGGACAGCTTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CLLEAPAWKQGRDCC*WMAGGWQTAGQLLN Trigger: ATTCAGAAGCTGTCCTGCAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGAAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGAGGCAGATGGCCTGGAAGCGGGGCCTCTCGATTATCAGAACTGAAACGATCTGGAGGCGCCTGCTaGGAAGCAGGGCCGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: RGGRWPGSGASRLSELKRSGGAC*EAGPGL Trigger: CAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGA...TCGTTTCAGTTCTGATAATCGAGAGGCCCCGCTTCCAGGCCATCTGCCTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS CCA 90 bp | GCTCTGGCAGCCATAAGTGGGGAGGAAGGAGAGTCCCATCGGGTCTaGGACACAGCAAGAGCACAGTGGGCCCCCTTTCAGAGATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALAAISGEEGESHRV*DTARAQWAPFQRCH Trigger: GTGGCATCTCTGAAAGGGGGCCCACTGTGCTCTTGCTGTGTCCCAGACCCGATGGGACTCTCCTTCCTCCCCACTTATGGCTGCCAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS CCA 90 bp | GGGTTCCTTTCAGAGATGCCACATGGGACAGGGCCTGGGCATACGTaGCTGTGTTCAGGAGGGTCCCTGGCAAGCAGGAGGGGAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GFLSEMPHGTGPGHT*LCSGGSLASRRGRK Trigger: CTTTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAACACAGCCACGTATGCCCAGGCCCTGTCCCATGTGGCATCTCTGAAAGGAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228878.2 |
||
| CDS-3UTR CAA 90 bp | CTACATACAGGGGACATGAAGACAGGCGGCTCCTCTGGGCATATTTCAGGGACCTCCAGGGCCTCCTTCTaGCTCCGGGTCTGGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LHTGDMKTGGSSGHISGTSRASF*LRVWSP Trigger: AGGGGACCAGACCCGGAGCAAGAAGGAGGCCCTGGA...GGTCCCTGAAATATGCCCAGAGGAGCCGCCTGTCTTCATGTCCCCTGTATGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAGGACCGGGCCAGGAGAGGGGCACACGCTATTGCACATCTCCCTCTGATCTTGGTTGGGGAGGTCTaGTCCTGGCTGCCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQDRARRGAHAIAHLPLILVGEV*SWLPSG Trigger: TCCAGAAGGCAGCCAGGACAAGACCTCCCCAACCAA...GATCAGAGGGAGATGTGCAATAGCGTGTGCCCCTCTCCTGGCCCGGTCCTGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CAA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCTCCAGGGCCTCCTTCTaGCTCCGGGTCTGGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RAFAALPEDLTSVPSNHTSRASF*LRVWSP Trigger: AGGGGACCAGACCCGGAGCAAGAAGGAGGCCCTGGA...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| CDS-3UTR CAA 90 bp | AGGGGAGGCAGATGGCCTGGAAGCGGGGCCTCTCGATTATCAGAACTGAAACGACGCTCTGTTCCTTGGTaGGGGAGGTCTTGTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGGRWPGSGASRLSELKRRSVPW*GRSCPG Trigger: GCCAGGACAAGACCTCCCCAACCAAGGAACAGAGCG...TCGTTTCAGTTCTGATAATCGAGAGGCCCCGCTTCCAGGCCATCTGCCTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CAA 90 bp | ATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCCAGGGCCTCCTTCTaGCTCCGGGTCTGGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: MVMSPRSRAFAALPEDLTSRASF*LRVWSP Trigger: AGGGGACCAGACCCGGAGCAAGAAGGAGGCCCTGGA...AGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS CCA 90 bp | AATGATCTTTCAGAGATGCCACATGGGACAGGGCCTGGGCATACGTaGCTGTGTTCAGGAGGGTCCCTGGCAAGCAGGAGGGGAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: NDLSEMPHGTGPGHT*LCSGGSLASRRGRK Trigger: CTTTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAACACAGCCACGTATGCCCAGGCCCTGTCCCATGTGGCATCTCTGAAAGATCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS-3UTR CAA 90 bp | AGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCCTGGGGGTGGAGAGTaGATGTTCCTCACTGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSRAFAALPEDLTSVPSNPGGGE*MFLTGG Trigger: ACCGCCAGTGAGGAACATCAACTCTCCACCCCCAGG...GTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CAA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCCCTGGGGGTGGAGAGTaGATGTTCCTCACTGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RAFAALPEDLTSVPSNHTPGGGE*MFLTGG Trigger: ACCGCCAGTGAGGAACATCAACTCTCCACCCCCAGG...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 ENSMUST00000228878.2 |
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| CDS-3UTR CAA 90 bp | AAGCAATGTGGGAGCGACTCATTTCCTGTCATGAGATGCCACTTCTGGGCATCTTCCAGGGCCTCCTTCTaGCTCCGGGTCTGGTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KQCGSDSFPVMRCHFWASSRASF*LRVWSP Trigger: AGGGGACCAGACCCGGAGCAAGAAGGAGGCCCTGGA...AGATGCCCAGAAGTGGCATCTCATGACAGGAAATGAGTCGCTCCCACATTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CAA 90 bp | GGCTGTTTGTGTGGAAACATCATCACCAAAAGCCACCAACAACCACAACCCTTGTCTGGAGGCGCCTGCTaGGAAGCAGGGCCGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: GCLCGNIITKSHQQPQPLSGGAC*EAGPGL Trigger: CAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGA...CAAGGGTTGTGGTTGTTGGTGGCTTTTGGTGATGATGTTTCCACACAAACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CAA 90 bp | GCTATTGCACATCTCCCTCTGATCTCTCCGAGGTCACCATCTGCATGGAAGAACCCTGGGGGTGGAGAGTaGATGTTCCTCACTGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: AIAHLPLISPRSPSAWKNPGGGE*MFLTGG Trigger: ACCGCCAGTGAGGAACATCAACTCTCCACCCCCAGG...GTTCTTCCATGCAGATGGTGACCTCGGAGAGATCAGAGGGAGATGTGCAATAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS-3UTR CAA 90 bp | ATATTTCAGGGACCTTCCTGGGGATTTCCTCCCACTTCTGGGGCTCTTGTCCTTTTGGTTGGGGAGGTCTaGTCCTGGCTGCCTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IFQGPSWGFPPTSGALVLLVGEV*SWLPSG Trigger: TCCAGAAGGCAGCCAGGACAAGACCTCCCCAACCAA...AAGGACAAGAGCCCCAGAAGTGGGAGGAAATCCCCAGGAAGGTCCCTGAAATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS TCA 90 bp | TCCCCTCTGAACCCAAAGCTTCCAGAACATAGCATTGCTCGGAAATaGTCTTTCAGAGATGCCACATGGGACAGGGCCTGGGCATACGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLNPKLPEHSIARK*SFRDATWDRAWAYV Trigger: CACGTATGCCCAGGCCCTGTCCCATGTGGCATCTCTGAAAGATCATTTCCGAGCAATGCTATGTTCTGGAAGCTTTGGGTTCAGAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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| CDS-3UTR CAA 90 bp | GAAAATGATGGCGATATGGTGATGTCTCCAAGGTCAAGAGCATTTGCCGCTCTTCCTGGGGGTGGAGAGTaGATGTTCCTCACTGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: ENDGDMVMSPRSRAFAALPGGGE*MFLTGG Trigger: ACCGCCAGTGAGGAACATCAACTCTCCACCCCCAGG...AAGAGCGGCAAATGCTCTTGACCTTGGAGACATCACCATATCGCCATCATTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CAA 90 bp | AGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACCATACCAGAAAGGGTACAGGTTaGGAGTTAAGGCTCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RAFAALPEDLTSVPSNHTRKGTG*ELRLSV Trigger: AACAGAGAGCCTTAACTCCAAACCTGTACCCTTTCT...GGTATGGTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CAA 90 bp | AGGTCAAGAGCATTTGCCGCTCTTCCAGAGGACCTGACTTCAGTTCCCAGCAACAGAAAGGGTACAGGTTaGGAGTTAAGGCTCTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RSRAFAALPEDLTSVPSNRKGTG*ELRLSV Trigger: AACAGAGAGCCTTAACTCCAAACCTGTACCCTTTCT...GTTGCTGGGAACTGAAGTCAGGTCCTCTGGAAGAGCGGCAAATGCTCTTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS TCA 90 bp | GGTACAGGTTTGGAGTTAAGGCTCTCTGTTGGGTCTGTTCCCCTCTaGACCCAAAGCTTCCAGAACATAGCATTGCTCGGAAATGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GTGLELRLSVGSVPL*TQSFQNIALLGNDL Trigger: AAGATCATTTCCGAGCAATGCTATGTTCTGGAAGCTTTGGGTTCAGAGGGGAACAGACCCAACAGAGAGCCTTAACTCCAAACCTGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS CCA 90 bp | TCGTCTATCAAGAAAGGGTACAGGTTTGGAGTTAAGGCTCTCTGTTaGGTCTGTTCCCCTCTGAACCCAAAGCTTCCAGAACATAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SSIKKGYRFGVKALC*VCSPLNPKLPEHSI Trigger: AATGCTATGTTCTGGAAGCTTTGGGTTCAGAGGGGAACAGACCCAACAGAGAGCCTTAACTCCAAACCTGTACCCTTTCTTGATAGACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS-3UTR CAA 90 bp | TCTTGTCACTTCCTAACCAAAACCTCAGCTAATACCTTTAAACAAGAGAAAAGGCCTGGGGGTGGAGAGTaGATGTTCCTCACTGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCHFLTKTSANTFKQEKRPGGGE*MFLTGG Trigger: ACCGCCAGTGAGGAACATCAACTCTCCACCCCCAGG...CCTTTTCTCTTGTTTAAAGGTATTAGCTGAGGTTTTGGTTAGGAAGTGACAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS-3UTR CAA 90 bp | AATTTGCCCAACAGTTCACTTATTTATGTACCTTTCTGGAGGAAATACGAGTTTCGCTCTGTTCCTTGGTaGGGGAGGTCTTGTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NLPNSSLIYVPFWRKYEFRSVPW*GRSCPG Trigger: GCCAGGACAAGACCTCCCCAACCAAGGAACAGAGCG...AAACTCGTATTTCCTCCAGAAAGGTACATAAATAAGTGAACTGTTGGGCAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189022.8 |
||
| CDS GCA 72 bp | CGCGGGCCTTCATGCGCAGGGCAGCCACGCTGGCCGTaGGGTTGCTCTGGCAGCCATAAGTGGGGAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RGPSCAGQPRWP*GCSGSHKWGGR Trigger: CCTTCCTCCCCACTTATGGCTGCCAGAGCAACCGCACGGCCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS GCA 72 bp | CTGGAGGCGCCTGCTTGGAAGCAGGGCCGGGACTGCTaGTGGTGGATGGCAGGAGGTTGGCAGACTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LEAPAWKQGRDC*WWMAGGWQTAG Trigger: TCCTGCAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS CCA 72 bp | GGCCTGGGCATACGTGGCTGTGTTCAGGAGGGTCCCTaGCAAGCAGGAGGGGAAGAAAGGCCCGGTAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLGIRGCVQEGP*QAGGEERPGRA Trigger: GGCCCTACCGGGCCTTTCTTCCCCTCCTGCTTGCCAGGGACCCTCCTGAACACAGCCACGTATGCCCAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000068938.7 ENSMUST00000186452.7 ENSMUST00000187377.7 ENSMUST00000189022.8 ENSMUST00000228878.2 |
||
| CDS CCA 72 bp | AATGCTCGCGGGCCTTCATGCGCAGGGCAGCCACGCTaGCCGTGCGGTTGCTCTGGCAGCCATAAGTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: NARGPSCAGQPR*PCGCSGSHKWG Trigger: TCCCCACTTATGGCTGCCAGAGCAACCGCACGGCCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGCATT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS CCA 72 bp | GAGGCGCCTGCTTGGAAGCAGGGCCGGGACTGCTGCTaGTGGATGGCAGGAGGTTGGCAGACTGCAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: EAPAWKQGRDCC*WMAGGWQTAGQ Trigger: CTGTCCTGCAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS GCA 72 bp | ACTGCAGGACAGCTTCTGAATGCTCGCGGGCCTTCATaGGCAGGGCAGCCACGCTGGCCGTGCGGTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TAGQLLNARGPS*AGQPRWPCGCS Trigger: AGAGCAACCGCACGGCCAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS GCA 72 bp | GGCAGGAGGTTGGCAGACTGCAGGACAGCTTCTGAATaGTCGCGGGCCTTCATGCGCAGGGCAGCCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRRLADCRTASE*SRAFMRRAATL Trigger: CAGCGTGGCTGCCCTGCGCATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAGTCTGCCAACCTCCTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS GCA 72 bp | CTTCTGGAGGCGCCTGCTTGGAAGCAGGGCCGGGACTaGTGCTGGTGGATGGCAGGAGGTTGGCAGACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLEAPAWKQGRD*CWWMAGGWQTA Trigger: TGCAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS CCA 72 bp | TCACTGGCGGTGGTGTCACCTCTGCCATGGGTTCCTTaGCCCCTGGCTCCTGGTCAGAGGCCCCTCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLAVVSPLPWVP*PLAPGQRPLSL Trigger: CAGAGAGAGGGGCCTCTGACCAGGAGCCAGGGGCCAAGGAACCCATGGCAGAGGTGACACCACCGCCAGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000068938.7 ENSMUST00000186452.7 ENSMUST00000187377.7 ENSMUST00000189022.8 ENSMUST00000228878.2 |
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| CDS CCA 72 bp | GGGCCCCCTTTCAGAGATGCCACATGGGACAGGGCCTaGGCATACGTGGCTGTGTTCAGGAGGGTCCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GPPFRDATWDRA*AYVAVFRRVPG Trigger: GCCAGGGACCCTCCTGAACACAGCCACGTATGCCCAGGCCCTGTCCCATGTGGCATCTCTGAAAGGGGGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS CAA 90 bp | TTGGTTGGGGAGGTCTTGTCCTGGCTGCCTTCTGGAGGCGCCTGCTaGGAAGCAGGGCCGGGACTGCTGCTGGTGGATGGCAGGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LVGEVLSWLPSGGAC*EAGPGLLLVDGRRL Trigger: CAACCTCCTGCCATCCACCAGCAGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGAAGGCAGCCAGGACAAGACCTCCCCAACCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS TCA 72 bp | GGATGGCAGGAGGTTGGCAGACTGCAGGACAGCTTCTaGATGCTCGCGGGCCTTCATGCGCAGGGCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GWQEVGRLQDSF*MLAGLHAQGSH Trigger: GTGGCTGCCCTGCGCATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAGTCTGCCAACCTCCTGCCATCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS CCA 72 bp | TTCCTTGGTTGGGGAGGTCTTGTCCTGGCTGCCTTCTaGAGGCGCCTGCTTGGAAGCAGGGCCGGGACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FLGWGGLVLAAF*RRLLGSRAGTA Trigger: AGCAGTCCCGGCCCTGCTTCCAAGCAGGCGCCTCCAGAAGGCAGCCAGGACAAGACCTCCCCAACCAAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
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| CDS CAA 90 bp | AGGGCCTCCTTCTTGCTCCGGGTCTGGTCCCCTGGGGGTGGAGAGTaGATGTTCCTCACTGGCGGTGGTGTCACCTCTGCCATGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RASFLLRVWSPGGGE*MFLTGGGVTSAMGS Trigger: GGAACCCATGGCAGAGGTGACACCACCGCCAGTGAGGAACATCAACTCTCCACCCCCAGGGGACCAGACCCGGAGCAAGAAGGAGGCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068938.7 ENSMUST00000186452.7 ENSMUST00000187377.7 ENSMUST00000189022.8 ENSMUST00000228878.2 |
||
| CDS TCA 72 bp | TCTTGCTCCGGGTCTGGTCCCCTGGGGGTGGAGAGTTaGTGTTCCTCACTGGCGGTGGTGTCACCTCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SCSGSGPLGVES*CSSLAVVSPLP Trigger: TGGCAGAGGTGACACCACCGCCAGTGAGGAACATCAACTCTCCACCCCCAGGGGACCAGACCCGGAGCAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068938.7 ENSMUST00000186452.7 ENSMUST00000187377.7 ENSMUST00000189022.8 ENSMUST00000228878.2 |
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| CDS CCA 72 bp | CTGGTCCCCTGGGGGTGGAGAGTTGATGTTCCTCACTaGCGGTGGTGTCACCTCTGCCATGGGTTCCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LVPWGWRVDVPH*RWCHLCHGFLG Trigger: GCCAAGGAACCCATGGCAGAGGTGACACCACCGCCAGTGAGGAACATCAACTCTCCACCCCCAGGGGACCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000068938.7 ENSMUST00000186452.7 ENSMUST00000187377.7 ENSMUST00000189022.8 ENSMUST00000228878.2 |
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| CDS CCA 72 bp | TCAGAGATGCCACATGGGACAGGGCCTGGGCATACGTaGCTGTGTTCAGGAGGGTCCCTGGCAAGCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SEMPHGTGPGHT*LCSGGSLASRR Trigger: CCTCCTGCTTGCCAGGGACCCTCCTGAACACAGCCACGTATGCCCAGGCCCTGTCCCATGTGGCATCTCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000068938.7 ENSMUST00000186452.7 ENSMUST00000187377.7 ENSMUST00000189022.8 ENSMUST00000228878.2 |
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| CDS CCA 72 bp | GAGTCCCATCGGGTCTGGGACACAGCAAGAGCACAGTaGGCCCCCTTTCAGAGATGCCACATGGGACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESHRVWDTARAQ*APFQRCHMGQG Trigger: GCCCTGTCCCATGTGGCATCTCTGAAAGGGGGCCCACTGTGCTCTTGCTGTGTCCCAGACCCGATGGGACTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS CCA 72 bp | GGGGTTCCTTTCAGAGATGCCACATGGGACAGGGCCTaGGCATACGTGGCTGTGTTCAGGAGGGTCCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GVPFRDATWDRA*AYVAVFRRVPG Trigger: GCCAGGGACCCTCCTGAACACAGCCACGTATGCCCAGGCCCTGTCCCATGTGGCATCTCTGAAAGGAACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228878.2 |
||
| CDS CAA 90 bp | CATACACTCTTCTCTCCCTCGCTCTGTTCCTTGGTTGGGGAGGTCTaGTCCTGGCTGCCTTCTGGAGGCGCCTGCTTGGAAGCAGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: HTLFSPSLCSLVGEV*SWLPSGGACLEAGP Trigger: CGGCCCTGCTTCCAAGCAGGCGCCTCCAGAAGGCAGCCAGGACAAGACCTCCCCAACCAAGGAACAGAGCGAGGGAGAGAAGAGTGTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS GCA 72 bp | GGACTGCTGCTGGTGGATGGCAGGAGGTTGGCAGACTaGAGGACAGCTTCTGAATGCTCGCGGGCCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GLLLVDGRRLAD*RTASECSRAFM Trigger: CATGAAGGCCCGCGAGCATTCAGAAGCTGTCCTGCAGTCTGCCAACCTCCTGCCATCCACCAGCAGCAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS CCA 72 bp | CAAGAGCACAGTGGGCCCCCTTTCAGAGATGCCACATaGGACAGGGCCTGGGCATACGTGGCTGTGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QEHSGPPFRDAT*DRAWAYVAVFR Trigger: CCTGAACACAGCCACGTATGCCCAGGCCCTGTCCCATGTGGCATCTCTGAAAGGGGGCCCACTGTGCTCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS CCA 72 bp | GCCATAAGTGGGGAGGAAGGAGAGTCCCATCGGGTCTaGGACACAGCAAGAGCACAGTGGGCCCCCTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AISGEEGESHRV*DTARAQWAPFQ Trigger: CTGAAAGGGGGCCCACTGTGCTCTTGCTGTGTCCCAGACCCGATGGGACTCTCCTTCCTCCCCACTTATGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS CAA 72 bp | TTCTCTCCCTCGCTCTGTTCCTTGGTTGGGGAGGTCTaGTCCTGGCTGCCTTCTGGAGGCGCCTGCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: FSPSLCSLVGEV*SWLPSGGACLE Trigger: TTCCAAGCAGGCGCCTCCAGAAGGCAGCCAGGACAAGACCTCCCCAACCAAGGAACAGAGCGAGGGAGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000186452.7 ENSMUST00000189022.8 |
||
| CDS TCA 72 bp | AACCCAAAGCTTCCAGAACATAGCATTGCTCGGAAATaGTCTTTCAGAGATGCCACATGGGACAGGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: NPKLPEHSIARK*SFRDATWDRAW Trigger: CCAGGCCCTGTCCCATGTGGCATCTCTGAAAGATCATTTCCGAGCAATGCTATGTTCTGGAAGCTTTGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS TCA 72 bp | TTGGAGTTAAGGCTCTCTGTTGGGTCTGTTCCCCTCTaGACCCAAAGCTTCCAGAACATAGCATTGCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: LELRLSVGSVPL*TQSFQNIALLG Trigger: TCCGAGCAATGCTATGTTCTGGAAGCTTTGGGTTCAGAGGGGAACAGACCCAACAGAGAGCCTTAACTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
||
| CDS CCA 72 bp | AAGAAAGGGTACAGGTTTGGAGTTAAGGCTCTCTGTTaGGTCTGTTCCCCTCTGAACCCAAAGCTTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: KKGYRFGVKALC*VCSPLNPKLPE Trigger: TTCTGGAAGCTTTGGGTTCAGAGGGGAACAGACCCAACAGAGAGCCTTAACTCCAAACCTGTACCCTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068938.7 ENSMUST00000187377.7 |
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