Pregenerated sensors for PRRX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026586Ensembl transcript IDs: ENSMUST00000027878.14, ENSMUST00000075805.13, ENSMUST00000174397.3
Found 271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTGCCACTATGCAAGTCCAGCCCTCCCTCTACAATTGGCACTCCTaGCCAGTACTACAGAGCCAAGCCATTCACTGTCTACCTCTTGTA | + |
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Preference number: 1 (lower is better) Translates to: LATMQVQPSLYNWHS*PVLQSQAIHCLPLV Trigger: TACAAGAGGTAGACAGTGAATGGCTTGGCTCTGTAGTACTGGTCAGGAGTGCCAATTGTAGAGGGAGGGCTGGACTTGCATAGTGGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | AGTCTTCATAGGCTCAGCCCAGTGATCCCTGAATGTAGCTGTGTCTaGGGGAGGCTGTTTTACCAACTCTTACACTCCCTCAGTTGGGCA | + |
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Preference number: 1 (lower is better) Translates to: SLHRLSPVIPECSCV*GRLFYQLLHSLSWA Trigger: TGCCCAACTGAGGGAGTGTAAGAGTTGGTAAAACAGCCTCCCTCAGACACAGCTACATTCAGGGATCACTGGGCTGAGCCTATGAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | GATCGGGTTCAGTCCAGGAATCCTAGGTGCGTTTATGTCAACCTGTaGTTTCTGAAAGGCACCATGAATGGAGGGCGAAAGTGTCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: DRVQSRNPRCVYVNL*FLKGTMNGGRKCPD Trigger: ATCTGGACACTTTCGCCCTCCATTCATGGTGCCTTTCAGAAATCACAGGTTGACATAAACGCACCTAGGATTCCTGGACTGAACCCGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | GAAGGATCTCATTTCCATTTGTGCAGTATGCTGTGTTCAGCTCCATaGGTAGGGACCACATGGCAGCCATCTGGATGGTTAATTGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: EGSHFHLCSMLCSAP*VGTTWQPSGWLIAW Trigger: CCAAGCAATTAACCATCCAGATGGCTGCCATGTGGTCCCTACTCATGGAGCTGAACACAGCATACTGCACAAATGGAAATGAGATCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | ATGGGATCAGGTTTGTTTGACGTCCACTGGAAATGGATGCCAGGATaGAGGTTTCAGATGACTTCCAACAACTGCCTTCCAAGATTCTGC | + |
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Preference number: 1 (lower is better) Translates to: MGSGLFDVHWKWMPG*RFQMTSNNCLPRFC Trigger: GCAGAATCTTGGAAGGCAGTTGTTGGAAGTCATCTGAAACCTTCATCCTGGCATCCATTTCCAGTGGACGTCAAACAAACCTGATCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR CCA 90 bp | TTGTATGCTCTTAATGTCCCTTCTCCTTTCACGGCTACAAAGTGCTaGACAAACCAGGAACAAGGAAGGAAGGAAGGAAGGAAGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: LYALNVPSPFTATKC*TNQEQGRKEGRKEG Trigger: TCCTTCCTTCCTTCCTTCCTTCCTTCCTTGTTCCTGGTTTGTCCAGCACTTTGTAGCCGTGAAAGGAGAAGGGACATTAAGAGCATACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR CCA 90 bp | TACAAAGGATCTGTTCATTTATATTCTTTCCCAGTCTTGCAACCTTaGCAAGAATTCCTGAGTCCAGAAGGAGACTGCTGGTGGCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: YKGSVHLYSFPVLQP*QEFLSPEGDCWWLP Trigger: GGGCAGCCACCAGCAGTCTCCTTCTGGACTCAGGAATTCTTGCCAAGGTTGCAAGACTGGGAAAGAATATAAATGAACAGATCCTTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | CCGGGTAGACGCAAATTCAAACCAGAGAGCTTAATGCACCACCTCTaGACTATACCCATATTCCTGTTCACTGACTCTATGGACTACCAA | + |
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Preference number: 1 (lower is better) Translates to: PGRRKFKPESLMHHL*TIPIFLFTDSMDYQ Trigger: TTGGTAGTCCATAGAGTCAGTGAACAGGAATATGGGTATAGTTCAGAGGTGGTGCATTAAGCTCTCTGGTTTGAATTTGCGTCTACCCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR CCA 90 bp | ACGTTGATTCCCTACTTGGCCATAACACAGCAAATGTGTCTTAAATaGGATACTTTTGTTCCAGAATGGTTCCAAGAGGGCCATCGGGCA | + |
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Preference number: 1 (lower is better) Translates to: TLIPYLAITQQMCLK*DTFVPEWFQEGHRA Trigger: TGCCCGATGGCCCTCTTGGAACCATTCTGGAACAAAAGTATCCCATTTAAGACACATTTGCTGTGTTATGGCCAAGTAGGGAATCAACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR CCA 90 bp | TGTTCCAACTCTGCTTGCTGGAGACTTAAACTTGGGGGAAGTGTCTaGTCTCCTCTTGTTTTGAACCAGAGCAAGAATAGAGCTATCACA | + |
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Preference number: 1 (lower is better) Translates to: CSNSACWRLKLGGSV*SPLVLNQSKNRAIT Trigger: TGTGATAGCTCTATTCTTGCTCTGGTTCAAAACAAGAGGAGACCAGACACTTCCCCCAAGTTTAAGTCTCCAGCAAGCAGAGTTGGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | TGTTTGACGTCCACTGGAAATGGATGCCAGGATGAAGGTTTCAGATaGCTTCCAACAACTGCCTTCCAAGATTCTGCTCTCCTTAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: CLTSTGNGCQDEGFR*LPTTAFQDSALLRK Trigger: TTTTCTAAGGAGAGCAGAATCTTGGAAGGCAGTTGTTGGAAGTCATCTGAAACCTTCATCCTGGCATCCATTTCCAGTGGACGTCAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR TCA 90 bp | CATACATGGGTTTCTCTCATTCTTACAGACACAGATACCTATCGTTaGGATCAGAGCTGCTTCAGGCTAAGTTCACAAGGGGTGTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: HTWVSLILTDTDTYR*DQSCFRLSSQGVCR Trigger: TCTACACACCCCTTGTGAACTTAGCCTGAAGCAGCTCTGATCTCAACGATAGGTATCTGTGTCTGTAAGAATGAGAGAAACCCATGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR GCA 90 bp | ATATTGTATGCTCTTAATGTCCCTTCTCCTTTCACGGCTACAAAGTaGTGGACAAACCAGGAACAAGGAAGGAAGGAAGGAAGGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: ILYALNVPSPFTATK*WTNQEQGRKEGRKE Trigger: TTCCTTCCTTCCTTCCTTCCTTCCTTGTTCCTGGTTTGTCCAGCACTTTGTAGCCGTGAAAGGAGAAGGGACATTAAGAGCATACAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR CCA 90 bp | CTCCCACGTGCTGAACTAATTGGCCTCTTCTTTGGTAAGGGAGTGTaGACATTGATAGTTCTAATGCCTTCATCTGGGTATATTGATGGA | + |
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Preference number: 1 (lower is better) Translates to: LPRAELIGLFFGKGV*TLIVLMPSSGYIDG Trigger: TCCATCAATATACCCAGATGAAGGCATTAGAACTATCAATGTCCACACTCCCTTACCAAAGAAGAGGCCAATTAGTTCAGCACGTGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR CCA 90 bp | ATGTTAAATTTGAATAGGATAGGCTGGTCATGCAGCCCAGTGACTTaGGTAGAAATCAGGCCCAAAAGTACTGTTCCAACTCTGCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: MLNLNRIGWSCSPVT*VEIRPKSTVPTLLA Trigger: AGCAAGCAGAGTTGGAACAGTACTTTTGGGCCTGATTTCTACCCAAGTCACTGGGCTGCATGACCAGCCTATCCTATTCAAATTTAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | CAAGGGGTGTGTAGAAAACTTCCAAATGCATCTACGACGTTTCTCTaGAGAACTTACTTGGACCTGAGAGAGCATTTAGATGAGGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: QGVCRKLPNASTTFL*RTYLDLREHLDEAL Trigger: CAAAGCCTCATCTAAATGCTCTCTCAGGTCCAAGTAAGTTCTTCAGAGAAACGTCGTAGATGCATTTGGAAGTTTTCTACACACCCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | TTTTTAAGAAGTGCATTGCTTCCTCTAGTACCTTGGCTGCCTGTCTaGTGTCATCATCTAATGTGCTCAAGAGAAGGAGTGATGTCATCA | + |
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Preference number: 1 (lower is better) Translates to: FLRSALLPLVPWLPV*CHHLMCSREGVMSS Trigger: TGATGACATCACTCCTTCTCTTGAGCACATTAGATGATGACATCAGACAGGCAGCCAAGGTACTAGAGGAAGCAATGCACTTCTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR CCA 90 bp | TCAAAGCACTTGTGTTTCACAAATGTGGCATTTCTCATCTTTATCTaGGCCCAATTCCCTGTAACCAGTTTTAAATCCCTCCATGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: SKHLCFTNVAFLIFI*AQFPVTSFKSLHGS Trigger: TGACCCATGGAGGGATTTAAAACTGGTTACAGGGAATTGGGCCCAGATAAAGATGAGAAATGCCACATTTGTGAAACACAAGTGCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | CTGAAAGGCACCATGAATGGAGGGCGAAAGTGTCCAGATAGGGATTaGAATAGTCATCTATTATTTCCAGCTGTAAATGATTCCTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: LKGTMNGGRKCPDRD*NSHLLFPAVNDSFL Trigger: TAAGAAGGAATCATTTACAGCTGGAAATAATAGATGACTATTTCAATCCCTATCTGGACACTTTCGCCCTCCATTCATGGTGCCTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR GCA 90 bp | TTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTaGAACTTAAATCATCATGTCTTGCTTCTACTTGAAATGCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: LLLKRDSMKPLEACL*NLNHHVLLLLEMQK Trigger: CTTCTGCATTTCAAGTAGAAGCAAGACATGATGATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR CCA 90 bp | AGAGAGATTGGGATACATAAGAAGTACAAACGGAGTAGGAAGTACTaGGAATCTAAAGAAAACCTTCTCCCTAACAAAGTTCTAGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: REIGIHKKYKRSRKY*ESKENLLPNKVLGS Trigger: TGACCCTAGAACTTTGTTAGGGAGAAGGTTTTCTTTAGATTCCCAGTACTTCCTACTCCGTTTGTACTTCTTATGTATCCCAATCTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR GCA 90 bp | GAAAACTTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATaGCTGTGCAACTTAAATCATCATGTCTTGCTTCTACTTGAAATG | + |
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Preference number: 1 (lower is better) Translates to: ENLLLKRDSMKPLEA*LCNLNHHVLLLLEM Trigger: CATTTCAAGTAGAAGCAAGACATGATGATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | CAAGAGAAAGATCTTTTAATGAATATCTCATGTGAGGTACTAGCTTaGCATGATGGTACTGACAGAAACAACAAGGTTTGTCATCGCCTT | + |
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Preference number: 1 (lower is better) Translates to: QEKDLLMNISCEVLA*HDGTDRNNKVCHRL Trigger: AAGGCGATGACAAACCTTGTTGTTTCTGTCAGTACCATCATGTCAAGCTAGTACCTCACATGAGATATTCATTAAAAGATCTTTCTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR TCA 90 bp | ATTTCCTTACTAGAAAACAAAGCTTTCAAATACCGTGTTAATCCATaGATATTGTATGCTCTTAATGTCCCTTCTCCTTTCACGGCTACA | + |
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Preference number: 1 (lower is better) Translates to: ISLLENKAFKYRVNP*ILYALNVPSPFTAT Trigger: TGTAGCCGTGAAAGGAGAAGGGACATTAAGAGCATACAATATTCATGGATTAACACGGTATTTGAAAGCTTTGTTTTCTAGTAAGGAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR TCA 90 bp | TTAAACTTATATTCTTTCACAAAGTTTACCACAAATGAACAAAATTaGGCGTCAGTGCTTCAGGTGTATTTCCTGGTACGTGCTCAGATA | + |
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Preference number: 1 (lower is better) Translates to: LNLYSFTKFTTNEQN*ASVLQVYFLVRAQI Trigger: TATCTGAGCACGTACCAGGAAATACACCTGAAGCACTGACGCTCAATTTTGTTCATTTGTGGTAAACTTTGTGAAAGAATATAAGTTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR CAA 90 bp | AGAGGTAAACCCAGTAAGGAATGTCAGCCAGCTGCAAAAGCAGCCTaGAGAGTGGTGGATGGCTGGGGAGCGTGTGGAAGTGGAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RGKPSKECQPAAKAA*RVVDGWGACGSGAR Trigger: TCTTGCTCCACTTCCACACGCTCCCCAGCCATCCACCACTCTCAAGGCTGCTTTTGCAGCTGGCTGACATTCCTTACTGGGTTTACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR CAA 90 bp | GCCTCTTTCCCTTGCCACTATGCAAGTCCAGCCCTCCCTCTACAATaGGCACTCCTGACCAGTACTACAGAGCCAAGCCATTCACTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ASFPCHYASPALPLQ*ALLTSTTEPSHSLS Trigger: AGACAGTGAATGGCTTGGCTCTGTAGTACTGGTCAGGAGTGCCAATTGTAGAGGGAGGGCTGGACTTGCATAGTGGCAAGGGAAAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGTATTTCCTGGTACGTGCTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAGGTTCCTCTCCTGCTTTaGTCCGCCATGGTCCCAATA | + |
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Preference number: 2 (lower is better) Translates to: GVFPGTCSDKAAVLWVYQVPLLL*SAMVPI Trigger: TATTGGGACCATGGCGGAGCAAAGCAGGAGAGGAAC...CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGCCCAGTGACTTGGGTAGAAATCAGGCCCAAAAGTACTGTTCCAACTCTGAAGGAGACTGCTGGTaGCTGCCCCTCTCTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: MQPSDLGRNQAQKYCSNSEGDCW*LPLSLL Trigger: CAGAAGAGAGAGGGGCAGCCACCAGCAGTCTCCTTC...AGAGTTGGAACAGTACTTTTGGGCCTGATTTCTACCCAAGTCACTGGGCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGTATTTCCTGGTACGTGCTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAGATTTTGTTCCTCTCCTaGTTTGCTCCGCCATGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GVFPGTCSDKAAVLWVYQILFLS*FAPPWS Trigger: GGACCATGGCGGAGCAAAGCAGGAGAGGAACAAAAT...CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR-3UTR GCA 90 bp | TGTACAAGAGGAATCAGCCTCTTTCCCTTGCCACTATGCAAGTCCAGCCCTCCCTCTCTGACAAGAGTCTaGTCTCTGTCCCTGGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: CTRGISLFPLPLCKSSPPSLTRV*SLSLVS Trigger: TGAAACCAGGGACAGAGAGCAGACTCTTGTCAGAGA...GGGAGGGCTGGACTTGCATAGTGGCAAGGGAAAGAGGCTGATTCCTCTTGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGTATTTCCTGGTACGTGCTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAGGAAGTAGAGAAAGAGTaGTGTCTTCCCTCACCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GVFPGTCSDKAAVLWVYQEVEKE*CLPSPF Trigger: GAAGGGTGAGGGAAGACAGCACTCTTTCTCTACTTC...CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR-3UTR GCA 90 bp | AAGAAGTACAAACGGAGTAGGAAGTACTGGGAATCTAAAGAAAACCTTCTCCCTGAGACTGCTGGTGGCTaGCCCTCTCTCTTCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: KKYKRSRKYWESKENLLPETAGG*PSLFCP Trigger: GGGGCAGAAGAGAGAGGGGCAGCCACCAGCAGTCTC...AGGGAGAAGGTTTTCTTTAGATTCCCAGTACTTCCTACTCCGTTTGTACTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR-3UTR TCA 90 bp | GAAACAAAGAAATACCAGCTCTGCCTCCCACCCTCGATGCTAAACCTCATTTCATGCTGTTGGCCATGTTaGTACCCTGTGCAGGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: ETKKYQLCLPPSMLNLISCCWPC*YPVQGY Trigger: ATAGCCCTGCACAGGGTATCAACATGGCCAACAGCA...TGAAATGAGGTTTAGCATCGAGGGTGGGAGGCAGAGCTGGTATTTCTTTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
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| 3UTR-3UTR GCA 90 bp | GAAACAAAGAAATACCAGCTCTGCCTCCCACCCTCGATGCTAAACCTCATTTCAGTTCCTCTCCTGCTTTaGTCCGCCATGGTCCCAATA | + |
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Preference number: 2 (lower is better) Translates to: ETKKYQLCLPPSMLNLISVPLLL*SAMVPI Trigger: TATTGGGACCATGGCGGAGCAAAGCAGGAGAGGAAC...TGAAATGAGGTTTAGCATCGAGGGTGGGAGGCAGAGCTGGTATTTCTTTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR-3UTR GCA 90 bp | GGTGTATTTCCTGGTACGTGCTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAGTCCACTGGAAATGGATaGCAGGATGAAGGTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: GVFPGTCSDKAAVLWVYQSTGNG*QDEGFR Trigger: TCTGAAACCTTCATCCTGGCATCCATTTCCAGTGGA...CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAACATCCCTGTGAGGTAGGACGGCGGATGAAGATATaGCAGAACAGGATAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ERERKQMDVASQHPCEVGRRMKI*QNRIGV Trigger: GACACCTATCCTGTTCTGTCATATCTTCATCCGCCG...TCCTACCTCACAGGGATGTTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR-3UTR GCA 90 bp | GAAACAAAGAAATACCAGCTCTGCCTCCCACCCTCGATGCTAAACCTCATTTCAAAGAAATACCAGCTCTaGCTCCCACCCTCGATGCTA | + |
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Preference number: 2 (lower is better) Translates to: ETKKYQLCLPPSMLNLISKKYQL*LPPSML Trigger: TAGCATCGAGGGTGGGAGGCAGAGCTGGTATTTCTT...TGAAATGAGGTTTAGCATCGAGGGTGGGAGGCAGAGCTGGTATTTCTTTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR-3UTR CCA 90 bp | GGTGTATTTCCTGGTACGTGCTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAGTGCTTTGCTCCGCCATaGTCCCAATATTTTAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: GVFPGTCSDKAAVLWVYQCFAPP*SQYFSS Trigger: AGAACTAAAATATTGGGACCATGGCGGAGCAAAGCA...CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR-3UTR CCA 90 bp | GAAACAAAGAAATACCAGCTCTGCCTCCCACCCTCGATGCTAAACCTCATTTCACCTTCAGTCTCAGGTTaGCAATGCTGTTGGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: ETKKYQLCLPPSMLNLISPSVSG*QCCWPC Trigger: ACATGGCCAACAGCATTGCCAACCTGAGACTGAAGG...TGAAATGAGGTTTAGCATCGAGGGTGGGAGGCAGAGCTGGTATTTCTTTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGTCAGAGGCCATCTCTTTGGTTTGTCGTCTTGTCAAGGCAAGAGCAATCCAGTCTTGCAACCTTaGCAAGAATTCCTGAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: TEVRGHLFGLSSCQGKSNPVLQP*QEFLSP Trigger: TGGACTCAGGAATTCTTGCCAAGGTTGCAAGACTGG...ATTGCTCTTGCCTTGACAAGACGACAAACCAAAGAGATGGCCTCTGACCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR-3UTR CCA 90 bp | TGTACAAGAGGAATCAGCCTCTTTCCCTTGCCACTATGCAAGTCCAGCCCTCCCGACCCAGAACATACATaGGTTTCTCTCATTCTTACA | + |
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Preference number: 2 (lower is better) Translates to: CTRGISLFPLPLCKSSPPDPEHT*VSLILT Trigger: TGTAAGAATGAGAGAAACCCATGTATGTTCTGGGTC...GGGAGGGCTGGACTTGCATAGTGGCAAGGGAAAGAGGCTGATTCCTCTTGTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR-3UTR CCA 90 bp | CTTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTCATGGCCACAAGGGTTaGGCCAATGAAGACCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LTSKERFHEAFGGMPVQLHGHKG*ANEDPE Trigger: TTCTGGGTCTTCATTGGCCCAACCCTTGTGGCCATG...AAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATCGGCGGATGAAGATATaGCAGAACAGGATAGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDRRMKI*QNRIGV Trigger: GACACCTATCCTGTTCTGTCATATCTTCATCCGCCG...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR-3UTR TCA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATCATGACCAACCACATTaGTCAGACTGGTCAGTGACC | + |
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Preference number: 2 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDHDQPH*SDWSVT Trigger: GGTCACTGACCAGTCTGATCAATGTGGTTGGTCATG...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| 3UTR-3UTR GCA 90 bp | GAGACAAGCTATAGAAGTCAGAAAACCATTCTCTCTGACAAGAGTCTGCTCTCTAGGATAGGCTGGTCATaGAGCCCAGTGACTTGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: ETSYRSQKTILSDKSLLSRIGWS*SPVTWV Trigger: TACCCAAGTCACTGGGCTGCATGACCAGCCTATCCT...AGAGAGCAGACTCTTGTCAGAGAGAATGGTTTTCTGACTTCTATAGCTTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGCAGCCCAGTGACTTGGGTAGAAATCAGGCCCAAAAGTACTGTTCCAACTCTTGGGGCATGTCTCTTTaGTTCAGATTGCCTAACTTG | + |
|
Preference number: 2 (lower is better) Translates to: MQPSDLGRNQAQKYCSNSWGMSL*FRLPNL Trigger: CAAGTTAGGCAATCTGAACCAAAGAGACATGCCCCA...AGAGTTGGAACAGTACTTTTGGGCCTGATTTCTACCCAAGTCACTGGGCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 90 bp | AAGCTGCTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTaGAGTTTATGGGATCAGGTTTGTTTGACGTCCACTGGAAATGGA | + |
|
Preference number: 2 (lower is better) Translates to: KLLVRSIRHNIPLPP*SLWDQVCLTSTGNG Trigger: TCCATTTCCAGTGGACGTCAAACAAACCTGATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAGCAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR CAA 90 bp | TTACAAAGGATCTGTTCATTTATATTCTTTCCCAGTCTTGCAACCTaGGCAAGAATTCCTGAGTCCAGAAGGAGACTGCTGGTGGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LQRICSFIFFPSLAT*ARIPESRRRLLVAA Trigger: GGCAGCCACCAGCAGTCTCCTTCTGGACTCAGGAATTCTTGCCAAGGTTGCAAGACTGGGAAAGAATATAAATGAACAGATCCTTTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 90 bp | GTTTCTGCTAGATGCCCACACTGGGGCATGTCTCTTTGGTTCAGATaGCCTAACTTGATGCTAGTTCAGGAAGGATCTCATTTCCATTTG | + |
|
Preference number: 2 (lower is better) Translates to: VSARCPHWGMSLWFR*PNLMLVQEGSHFHL Trigger: CAAATGGAAATGAGATCCTTCCTGAACTAGCATCAAGTTAGGCAATCTGAACCAAAGAGACATGCCCCAGTGTGGGCATCTAGCAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 90 bp | TGCTGGAGACTTAAACTTGGGGGAAGTGTCTGGTCTCCTCTTGTTTaGAACCAGAGCAAGAATAGAGCTATCACACAGGAGTGCTCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: CWRLKLGGSVWSPLV*NQSKNRAITQECSK Trigger: TTTAGAGCACTCCTGTGTGATAGCTCTATTCTTGCTCTGGTTCAAAACAAGAGGAGACCAGACACTTCCCCCAAGTTTAAGTCTCCAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTAAATCTTGGCAAGAATTCCTaGGTCCAGAAGGAGACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: LLKRDSMKPLEACLCNLNLGKNS*VQKETA Trigger: AGCAGTCTCCTTCTGGACTCAGGAATTCTTGCCAAG...ATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR TCA 90 bp | GATCTCAGTATTGAGTATACATACTACATTGTTTATCCCTGGGTTCCAAACTCCCTGTGTTCAGCTCCATaGGTAGGGACCACATGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: DLSIEYTYYIVYPWVPNSLCSAP*VGTTWQ Trigger: CTGCCATGTGGTCCCTACTCATGGAGCTGAACACAG...GGAGTTTGGAACCCAGGGATAAACAATGTAGTATGTATACTCAATACTGAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTACTATGGTACTGGCCTaGGAAACCACAGAATCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LTSKERFHEAFGGMPVQLTMVLA*ETTESG Trigger: TCCTGATTCTGTGGTTTCTCAGGCCAGTACCATAGT...AAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR GCA 90 bp | TGTACAAGAGGAATCAGCCTCTTTCCCTTGCCACTATGCAAGTCCAGCCCTCCCGTTTGTCATCGCCTTTaGTTTTCATTATTTCTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CTRGISLFPLPLCKSSPPVCHRL*FSLFLA Trigger: AGCAAGAAATAATGAAAAGCAAAGGCGATGACAAAC...GGGAGGGCTGGACTTGCATAGTGGCAAGGGAAAGAGGCTGATTCCTCTTGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTACAAAGGATCTGTTCATTTATATTCTTTCCCAGTCTTGCAACCTTGGCACTTGAGAGTGGTGGATaGCTGGGGAGCGTGTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SLQRICSFIFFPSLATLALESGG*LGSVWK Trigger: CTTCCACACGCTCCCCAGCCATCCACCACTCTCAAG...TGCCAAGGTTGCAAGACTGGGAAAGAATATAAATGAACAGATCCTTTGTAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGGTCAGAGGCCATCTCTTTGGTTTGTCGTCTTGTCAAGGCAAGAGCAATTTTCTCATCTTTATCTaGGCCCAATTCCCTGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: TEVRGHLFGLSSCQGKSNFLIFI*AQFPVT Trigger: GGTTACAGGGAATTGGGCCCAGATAAAGATGAGAAA...ATTGCTCTTGCCTTGACAAGACGACAAACCAAAGAGATGGCCTCTGACCTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTAAATTGCAGCCCAGTGACTTaGGTAGAAATCAGGCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLKRDSMKPLEACLCNLNCSPVT*VEIRPK Trigger: TTTGGGCCTGATTTCTACCCAAGTCACTGGGCTGCA...ATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATaGGGATACATAAGAAGTACAAACGGAGTAGGAAGTACTGGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: RERERERERERERER*GYIRSTNGVGSTGN Trigger: ATTCCCAGTACTTCCTACTCCGTTTGTACTTCTTATGTATCCCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATAGAGTACACCAGACATaGCCAACCACATTGATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDRVHQT*PTTLIR Trigger: TCTGATCAATGTGGTTGGTCATGTCTGGTGTACTCT...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR TCA 90 bp | ATAGTGAGTCTTGATCATTTTAGGGTTGGTGTGCATTTCCATTCTCATAAATCACTGCAAAAGCAGCCTTaGGAGTGGTGGATGGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: IVSLDHFRVGVHFHSHKSLQKQP*EWWMAG Trigger: CCCAGCCATCCACCACTCTCAAGGCTGCTTTTGCAG...TGATTTATGAGAATGGAAATGCACACCAACCCTAAAATGATCAAGACTCACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGCAGCCCAGTGACTTGGGTAGAAATCAGGCCCAAAAGTACTGTTCCAACTCTGAGTGCTCTAAAGGTTaGCCAAGAGAAAGATCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: MQPSDLGRNQAQKYCSNSECSKG*PRERSF Trigger: AAAAGATCTTTCTCTTGGTCAACCTTTAGAGCACTC...AGAGTTGGAACAGTACTTTTGGGCCTGATTTCTACCCAAGTCACTGGGCTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTTCCATTTGTGCAGTATaGTGTGTTCAGCTCCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: LTSKERFHEAFGGMPVQLSICAV*CVQLHE Trigger: CTCATGGAGCTGAACACAGCATACTGCACAAATGGA...AAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTGAGTCTTGATCATTTTAGGGTTGGTGTGCATTTCCATTCTCATAAATCACCAGAAGGAGACTGCTaGTGGCTGCCCCTCTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: IVSLDHFRVGVHFHSHKSPEGDC*WLPLSL Trigger: AAGAGAGAGGGGCAGCCACCAGCAGTCTCCTTCTGG...TGATTTATGAGAATGGAAATGCACACCAACCCTAAAATGATCAAGACTCACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGACAAGCTATAGAAGTCAGAAAACCATTCTCTCTGACAAGAGTCTGCTCTCTACTTTTGTTCCAGAATaGTTCCAAGAGGGCCATCGG | + |
|
Preference number: 2 (lower is better) Translates to: ETSYRSQKTILSDKSLLSTFVPE*FQEGHR Trigger: CCGATGGCCCTCTTGGAACCATTCTGGAACAAAAGT...AGAGAGCAGACTCTTGTCAGAGAGAATGGTTTTCTGACTTCTATAGCTTGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGCACTTGTGTTTCACAAATGTGGCATTTCTCATCTTTATCTGGGCCCAATTCGAAAGGCACCATGAATaGAGGGCGAAAGTGTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KHLCFTNVAFLIFIWAQFERHHE*RAKVSR Trigger: TCTGGACACTTTCGCCCTCCATTCATGGTGCCTTTC...GAATTGGGCCCAGATAAAGATGAGAAATGCCACATTTGTGAAACACAAGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR TCA 90 bp | GCATGGCAACGTGGTTTGGTCAAGTTCACCAGGAAAATTGCCAAAGCAAAGCTGTCTTTCATATTCCTATaGAGTAGAGAAAGAGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: AWQRGLVKFTRKIAKAKLSFIFL*SRERVL Trigger: CAGCACTCTTTCTCTACTTCATAGGAATATGAAAGA...CAGCTTTGCTTTGGCAATTTTCCTGGTGAACTTGACCAAACCACGTTGCCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR TCA 90 bp | CTTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTCAAGTTGAATGTCTCTaGAGAGGTAAACCCAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: LTSKERFHEAFGGMPVQLQVECL*RGKPSK Trigger: CTTACTGGGTTTACCTCTTCAGAGACATTCAACTTG...AAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAGGTCAGAGGCCATCTCTTTGGTTTGTCGTCTTGTCAAGGCAAGAGCAATGAAATATCTCTCTACTaGCACCAGATCTTTTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: TEVRGHLFGLSSCQGKSNEISLY*HQIFCI Trigger: AATGCAAAAGATCTGGTGGCAGTAGAGAGATATTTC...ATTGCTCTTGCCTTGACAAGACGACAAACCAAAGAGATGGCCTCTGACCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATAATTATAGGAATGGGTaGGCTGAGCCTAACAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDNYRNG*AEPNRR Trigger: TCTTCTGTTAGGCTCAGCCCACCCATTCCTATAATT...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR TCA 90 bp | GTTGAGAAGGAATCACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTCATGACCAACCACATTaGTCAGACTGGTCAGTGACC | + |
|
Preference number: 2 (lower is better) Translates to: VEKESLHEIKVHKMIFLLHDQPH*SDWSVT Trigger: GGTCACTGACCAGTCTGATCAATGTGGTTGGTCATG...AAGAAGGAAGATCATCTTGTGTACTTTGATCTCATGAAGTGATTCCTTCTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR TCA 90 bp | GAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAACATCCCTGTGAGGTAGGATCTTTCATATTCCTATaGAGTAGAGAAAGAGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ERERKQMDVASQHPCEVGSFIFL*SRERVL Trigger: CAGCACTCTTTCTCTACTTCATAGGAATATGAAAGA...TCCTACCTCACAGGGATGTTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAGGTCAGAGGCCATCTCTTTGGTTTGTCGTCTTGTCAAGGCAAGAGCAATCTTACATTTCTAGGATaGCTTTCCTCAGTTTCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: TEVRGHLFGLSSCQGKSNLTFLG*LSSVSL Trigger: TAAAGAAACTGAGGAAAGGCATCCTAGAAATGTAAG...ATTGCTCTTGCCTTGACAAGACGACAAACCAAAGAGATGGCCTCTGACCTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATTTGACTGTTGGCACCTaGTTCCTCTGTAAACTATAT | + |
|
Preference number: 2 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDLTVGT*FLCKLY Trigger: ATATAGTTTACAGAGGAACCAGGTGCCAACAGTCAA...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| 3UTR CAA 90 bp | TCTCTCTACTGCCACCAGATCTTTTGCATTTCTCTGATCTCAGTATaGAGTATACATACTACATTGTTTATCCCTGGGTTCCAAACTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SLYCHQIFCISLISV*SIHTTLFIPGFQTP Trigger: GGGAGTTTGGAACCCAGGGATAAACAATGTAGTATGTATACTCAATACTGAGATCAGAGAAATGCAAAAGATCTGGTGGCAGTAGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR TCA 90 bp | GATCTCAGTATTGAGTATACATACTACATTGTTTATCCCTGGGTTCCAAACTCCGGTCTCCTCTTGTTTTaGACCAGAGCAAGAATAGAG | + |
|
Preference number: 2 (lower is better) Translates to: DLSIEYTYYIVYPWVPNSGLLLF*TRARIE Trigger: CTCTATTCTTGCTCTGGTTCAAAACAAGAGGAGACC...GGAGTTTGGAACCCAGGGATAAACAATGTAGTATGTATACTCAATACTGAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR GCA 90 bp | GTTGAGAAGGAATCACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTGAAGTAGAGAAAGAGTaGTGTCTTCCCTCACCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: VEKESLHEIKVHKMIFLLEVEKE*CLPSPF Trigger: GAAGGGTGAGGGAAGACAGCACTCTTTCTCTACTTC...AAGAAGGAAGATCATCTTGTGTACTTTGATCTCATGAAGTGATTCCTTCTCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGTGCTCTAAAGGTTGACCAAGAGAAAGATCTTTTAATGAATATCTCATGTGGAATGTCAGCCAGCTaGAAAAGCAGCCTTGAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: RSALKVDQEKDLLMNISCGMSAS*KSSLES Trigger: ACTCTCAAGGCTGCTTTTGCAGCTGGCTGACATTCC...ACATGAGATATTCATTAAAAGATCTTTCTCTTGGTCAACCTTTAGAGCACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | CAAAATACACACACAAAAGCAAATGGTGATGGTAGGTATCCGAGAGCAAGAAGATGCTTTGCTCCGCCATaGTCCCAATATTTTAGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QNTHTKANGDGRYPRARRCFAPP*SQYFSS Trigger: AGAACTAAAATATTGGGACCATGGCGGAGCAAAGCA...TCTTCTTGCTCTCGGATACCTACCATCACCATTTGCTTTTGTGTGTGTATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR CCA 90 bp | GTTGAGAAGGAATCACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTGTGCAGGGCTATTGTTaGCACATGTGGCAGAATAAG | + |
|
Preference number: 2 (lower is better) Translates to: VEKESLHEIKVHKMIFLLVQGYC*HMWQNK Trigger: CTTATTCTGCCACATGTGCCAACAATAGCCCTGCAC...AAGAAGGAAGATCATCTTGTGTACTTTGATCTCATGAAGTGATTCCTTCTCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| 3UTR-3UTR CCA 90 bp | CTTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTGGATGGTTAATTGCTTaGGGTAAAAATCCCAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LTSKERFHEAFGGMPVQLGWLIA*GKNPKE Trigger: TTCTTTGGGATTTTTACCCCAAGCAATTAACCATCC...AAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGTGCTCTAAAGGTTGACCAAGAGAAAGATCTTTTAATGAATATCTCATGTCACATGGCAGCCATCTaGATGGTTAATTGCTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: RSALKVDQEKDLLMNISCHMAAI*MVNCLG Trigger: CCCCAAGCAATTAACCATCCAGATGGCTGCCATGTG...ACATGAGATATTCATTAAAAGATCTTTCTCTTGGTCAACCTTTAGAGCACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTAAATCAGGGAAAAGTGTCTTaGCAACTTCATCTCAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLKRDSMKPLEACLCNLNQGKVS*QLHLKE Trigger: TTCTTTGAGATGAAGTTGCCAAGACACTTTTCCCTG...ATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAATACAATGCAATGTTAAATTTGAATAGGATAGGCTGGTCATGCAGCCCACATATTCCTGTTCACTaGCTCTATGGACTACCAATA | + |
|
Preference number: 2 (lower is better) Translates to: FQYNAMLNLNRIGWSCSPHIPVH*LYGLPI Trigger: TATTGGTAGTCCATAGAGTCAGTGAACAGGAATATG...TGGGCTGCATGACCAGCCTATCCTATTCAAATTTAACATTGCATTGTATTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR GCA 90 bp | GAAGAACAAGTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTTGACTGACGTTCACCAGGAAAATTaGCAAAGCAAAGCTGGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: EEQVCAKSESYTPNTLTDVHQEN*QSKAGN Trigger: GTTCCCAGCTTTGCTTTGGCAATTTTCCTGGTGAAC...GTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATACTTGTTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR GCA 90 bp | ATAGTGAGTCTTGATCATTTTAGGGTTGGTGTGCATTTCCATTCTCATAAATCATGTTCCAACTCTGCTTaGTGGAGACTTAAACTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: IVSLDHFRVGVHFHSHKSCSNSA*WRLKLG Trigger: CCCAAGTTTAAGTCTCCAGCAAGCAGAGTTGGAACA...TGATTTATGAGAATGGAAATGCACACCAACCCTAAAATGATCAAGACTCACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 90 bp | CAATCTTATACATTTTGGCTTTTCCAATACAATGCAATGTTAAATTaGAATAGGATAGGCTGGTCATGCAGCCCAGTGACTTGGGTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QSYTFWLFQYNAMLN*NRIGWSCSPVTWVE Trigger: TTCTACCCAAGTCACTGGGCTGCATGACCAGCCTATCCTATTCAAATTTAACATTGCATTGTATTGGAAAAGCCAAAATGTATAAGATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTGAGAAGGAATCACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTCGCATATTGCAATGTTaGCATATTTGGCCAAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: VEKESLHEIKVHKMIFLLRILQC*HIWPKS Trigger: TGATTTTGGCCAAATATGTCAACATTGCAATATGCG...AAGAAGGAAGATCATCTTGTGTACTTTGATCTCATGAAGTGATTCCTTCTCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTGAGTCTTGATCATTTTAGGGTTGGTGTGCATTTCCATTCTCATAAATCACGGAGTAGGAAGTACTaGGAATCTAAAGAAAACCTT | + |
|
Preference number: 2 (lower is better) Translates to: IVSLDHFRVGVHFHSHKSRSRKY*ESKENL Trigger: AAGGTTTTCTTTAGATTCCCAGTACTTCCTACTCCG...TGATTTATGAGAATGGAAATGCACACCAACCCTAAAATGATCAAGACTCACTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 90 bp | GAAGAACAAGTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTaGACTGACACGCATATTGCAATGTTGACATATTTGGCCAAAATC | + |
|
Preference number: 2 (lower is better) Translates to: EEQVCAKSESYTPNT*TDTHIAMLTYLAKI Trigger: GATTTTGGCCAAATATGTCAACATTGCAATATGCGTGTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATACTTGTTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGTTTTAAATCCCTCCATGGGTCAAGCATTAACTTTAAAAAGATACACAGAATAATAGCCTTGACTTaGGTTTCTCCAAGGTTTAAA | + |
|
Preference number: 2 (lower is better) Translates to: TSFKSLHGSSINFKKIHRIIALT*VSPRFK Trigger: TTTAAACCTTGGAGAAACCCAAGTCAAGGCTATTAT...TCTGTGTATCTTTTTAAAGTTAATGCTTGACCCATGGAGGGATTTAAAACTGGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | CCAGCTGCAAAAGCAGCCTTGAGAGTGGTGGATGGCTaGGGAGCGTGTGGAAGTGGAGCAAGAGAGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PAAKAALRVVDG*GACGSGARESG Trigger: CCCACTCTCTCTTGCTCCACTTCCACACGCTCCCCAGCCATCCACCACTCTCAAGGCTGCTTTTGCAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTACAAGAGGAATCAGCCTCTTTCCCTTGCCACTATGCAAGTCCAGCCCTCCCGCTTCCTCTAGTACCTaGGCTGCCTGTCTGATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CTRGISLFPLPLCKSSPPASSST*AACLMS Trigger: TGACATCAGACAGGCAGCCAAGGTACTAGAGGAAGC...GGGAGGGCTGGACTTGCATAGTGGCAAGGGAAAGAGGCTGATTCCTCTTGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR TCA 72 bp | AGGCTCAGCCCAGTGATCCCTGAATGTAGCTGTGTCTaGGGGAGGCTGTTTTACCAACTCTTACACTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RLSPVIPECSCV*GRLFYQLLHSL Trigger: GAGGGAGTGTAAGAGTTGGTAAAACAGCCTCCCTCAGACACAGCTACATTCAGGGATCACTGGGCTGAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR GCA 72 bp | AGGGGCACTGTACAAGAGGAATCAGCCTCTTTCCCTTaGCACTATGCAAGTCCAGCCCTCCCTCTACAATTG | + |
|
Preference number: 3 (lower is better) Translates to: RGTVQEESASFP*HYASPALPLQL Trigger: CAATTGTAGAGGGAGGGCTGGACTTGCATAGTGGCAAGGGAAAGAGGCTGATTCCTCTTGTACAGTGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR TCA 72 bp | ATGCAAGTCCAGCCCTCCCTCTACAATTGGCACTCCTaGCCAGTACTACAGAGCCAAGCCATTCACTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: MQVQPSLYNWHS*PVLQSQAIHCL Trigger: TAGACAGTGAATGGCTTGGCTCTGTAGTACTGGTCAGGAGTGCCAATTGTAGAGGGAGGGCTGGACTTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR TCA 72 bp | ACTTACTGGATCAGAGTCTTCATAGGCTCAGCCCAGTaGTCCCTGAATGTAGCTGTGTCTGAGGGAGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TYWIRVFIGSAQ*SLNVAVSEGGC Trigger: ACAGCCTCCCTCAGACACAGCTACATTCAGGGATCACTGGGCTGAGCCTATGAAGACTCTGATCCAGTAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR GCA 72 bp | TTGAGCGTCAGTGCTTCAGGTGTATTTCCTGGTACGTaGTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSVSASGVFPGT*SDKAAVLWVYQ Trigger: CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACCTGAAGCACTGACGCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR GCA 72 bp | TGTACAAGAGGAATCAGCCTCTTTCCCTTGCCACTATaGAAGTCCAGCCCTCCCTCTACAATTGGCACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CTRGISLFPLPL*KSSPPSTIGTP Trigger: AGGAGTGCCAATTGTAGAGGGAGGGCTGGACTTGCATAGTGGCAAGGGAAAGAGGCTGATTCCTCTTGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR GCA 72 bp | GCACACCAAACCCCCATGTTACTAGTTTCTGCTAGATaGCCACACTGGGGCATGTCTCTTTGGTTCAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: AHQTPMLLVSAR*PHWGMSLWFRL Trigger: CAATCTGAACCAAAGAGACATGCCCCAGTGTGGGCATCTAGCAGAAACTAGTAACATGGGGGTTTGGTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAATGTTCCTCTCCTGCTTaGCTCCGCCATGGTCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ERERERERERKQMDVASQCSSPA*LRHGPN Trigger: ATTGGGACCATGGCGGAGCAAAGCAGGAGAGGAACA...TTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR CAA 90 bp | GAAACAAAGAAATACCAGCTCTGCCTCCCACCCTCGATGCTAAACCTCATTTCAATGCTGTTGGCCATGTaGATACCCTGTGCAGGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: ETKKYQLCLPPSMLNLISMLLAM*IPCAGL Trigger: TAGCCCTGCACAGGGTATCAACATGGCCAACAGCAT...TGAAATGAGGTTTAGCATCGAGGGTGGGAGGCAGAGCTGGTATTTCTTTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| 3UTR TCA 72 bp | CAGTCCAGGAATCCTAGGTGCGTTTATGTCAACCTGTaGTTTCTGAAAGGCACCATGAATGGAGGGCGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QSRNPRCVYVNL*FLKGTMNGGRK Trigger: CTTTCGCCCTCCATTCATGGTGCCTTTCAGAAATCACAGGTTGACATAAACGCACCTAGGATTCCTGGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR TCA 72 bp | CATTTCCATTTGTGCAGTATGCTGTGTTCAGCTCCATaGGTAGGGACCACATGGCAGCCATCTGGATGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: HFHLCSMLCSAP*VGTTWQPSGWL Trigger: TAACCATCCAGATGGCTGCCATGTGGTCCCTACTCATGGAGCTGAACACAGCATACTGCACAAATGGAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | ACCCCCATGTTACTAGTTTCTGCTAGATGCCCACACTaGGGCATGTCTCTTTGGTTCAGATTGCCTAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: TPMLLVSARCPH*GMSLWFRLPNL Trigger: CAAGTTAGGCAATCTGAACCAAAGAGACATGCCCCAGTGTGGGCATCTAGCAGAAACTAGTAACATGGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGGAATCAGCCTCTTTCCCTTGCCACTATGCAAGTCCAGCCCTCCCTCTACGGTTTGTCATCGCCTTaGCTTTTCATTATTTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: KRNQPLSLATMQVQPSLYGLSSP*LFIISC Trigger: GCAAGAAATAATGAAAAGCAAAGGCGATGACAAACC...GTAGAGGGAGGGCTGGACTTGCATAGTGGCAAGGGAAAGAGGCTGATTCCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTGTAGCCTTGGCTTTCTaGAAGTGGACACATGGGACC | + |
|
Preference number: 3 (lower is better) Translates to: LTSKERFHEAFGGMPVQLVALAF*KWTHGT Trigger: GGTCCCATGTGTCCACTTCAAGAAAGCCAAGGCTAC...AAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCTCAGTATTGAGTATACATACTACATTGTTTATCCCTGGGTTCCAAACTCCGCTGCAAAAGCAGCCTaGAGAGTGGTGGATGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DLSIEYTYYIVYPWVPNSAAKAA*RVVDGW Trigger: CCAGCCATCCACCACTCTCAAGGCTGCTTTTGCAGC...GGAGTTTGGAACCCAGGGATAAACAATGTAGTATGTATACTCAATACTGAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR TCA 72 bp | TCCACTGGAAATGGATGCCAGGATGAAGGTTTCAGATaGCTTCCAACAACTGCCTTCCAAGATTCTGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: STGNGCQDEGFR*LPTTAFQDSAL Trigger: GAGAGCAGAATCTTGGAAGGCAGTTGTTGGAAGTCATCTGAAACCTTCATCCTGGCATCCATTTCCAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR TCA 72 bp | CCTCTCACAGGCTCTGCTTCACTGTTTTCTGGATTCTaGAATACAGAGGTCAGAGGCCATCTCTTTGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PLTGSASLFSGF*NTEVRGHLFGL Trigger: CAAACCAAAGAGATGGCCTCTGACCTCTGTATTTCAGAATCCAGAAAACAGTGAAGCAGAGCCTGTGAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR GCA 72 bp | AGAAATCAGGCCCAAAAGTACTGTTCCAACTCTGCTTaGTGGAGACTTAAACTTGGGGGAAGTGTCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RNQAQKYCSNSA*WRLKLGGSVWS Trigger: AGACCAGACACTTCCCCCAAGTTTAAGTCTCCAGCAAGCAGAGTTGGAACAGTACTTTTGGGCCTGATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | TTGAATAGGATAGGCTGGTCATGCAGCCCAGTGACTTaGGTAGAAATCAGGCCCAAAAGTACTGTTCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: LNRIGWSCSPVT*VEIRPKSTVPT Trigger: AGTTGGAACAGTACTTTTGGGCCTGATTTCTACCCAAGTCACTGGGCTGCATGACCAGCCTATCCTATTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTGTGGATGCCAGCAAGTaGAATGTCTCTGAAGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LTSKERFHEAFGGMPVQLVDASK*NVSEEV Trigger: TACCTCTTCAGAGACATTCAACTTGCTGGCATCCAC...AAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGTACAAACGGAGTAGGAAGTACTGGGAATCTAAAGAAAACCTTCTCCCTCCCAGTCTTGCAACCTaGGCAAGAATTCCTGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KKYKRSRKYWESKENLLPPSLAT*ARIPES Trigger: GGACTCAGGAATTCTTGCCAAGGTTGCAAGACTGGG...AGGGAGAAGGTTTTCTTTAGATTCCCAGTACTTCCTACTCCGTTTGTACTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAGGTCAGAGGCCATCTCTTTGGTTTGTCGTCTTGTCAAGGCAAGAGCAATTATTCTTTCCCAGTCTaGCAACCTTGGCAAGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: TEVRGHLFGLSSCQGKSNYSFPV*QPWQEF Trigger: GAATTCTTGCCAAGGTTGCAAGACTGGGAAAGAATA...ATTGCTCTTGCCTTGACAAGACGACAAACCAAAGAGATGGCCTCTGACCTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTAAATAATGAGCCAAATGCGTaGAGCAGATGTCAGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLKRDSMKPLEACLCNLNNEPNA*SRCQQH Trigger: GTGCTGCTGACATCTGCTCAACGCATTTGGCTCATT...ATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | TCTGCTTGCTGGAGACTTAAACTTGGGGGAAGTGTCTaGTCTCCTCTTGTTTTGAACCAGAGCAAGAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: SACWRLKLGGSV*SPLVLNQSKNR Trigger: TCTATTCTTGCTCTGGTTCAAAACAAGAGGAGACCAGACACTTCCCCCAAGTTTAAGTCTCCAGCAAGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | CTGATATCTGAAGTCACCCCAGTCAAAGTTTGTAAATaGGATCCCCATGAGAATGACTTCAGTGGAGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: LISEVTPVKVCK*DPHENDFSGAT Trigger: GGTTGCTCCACTGAAGTCATTCTCATGGGGATCCCATTTACAAACTTTGACTGGGGTGACTTCAGATATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATAGTTCACCAGGAAAATaGCCAAAGCAAAGCTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDSSPGK*PKQSWE Trigger: TTCCCAGCTTTGCTTTGGCAATTTTCCTGGTGAACT...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR CAA 90 bp | GTTGAGAAGGAATCACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTGCCTTCAGTCTCAGGTaGGCAATGCTGTTGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: VEKESLHEIKVHKMIFLLAFSLR*AMLLAM Trigger: CATGGCCAACAGCATTGCCAACCTGAGACTGAAGGC...AAGAAGGAAGATCATCTTGTGTACTTTGATCTCATGAAGTGATTCCTTCTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAACATCCCTGTGAGGTAGGATGTAAACTATATTCCTaGGCCTTCAGTCTCAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: ERERKQMDVASQHPCEVGCKLYS*AFSLRL Trigger: CAACCTGAGACTGAAGGCCAAGGAATATAGTTTACA...TCCTACCTCACAGGGATGTTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| 3UTR TCA 72 bp | GTTTCTCTCATTCTTACAGACACAGATACCTATCGTTaGGATCAGAGCTGCTTCAGGCTAAGTTCACAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: VSLILTDTDTYR*DQSCFRLSSQG Trigger: CCCTTGTGAACTTAGCCTGAAGCAGCTCTGATCTCAACGATAGGTATCTGTGTCTGTAAGAATGAGAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | TCTGTTCATTTATATTCTTTCCCAGTCTTGCAACCTTaGCAAGAATTCCTGAGTCCAGAAGGAGACTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SVHLYSFPVLQP*QEFLSPEGDCW Trigger: CCAGCAGTCTCCTTCTGGACTCAGGAATTCTTGCCAAGGTTGCAAGACTGGGAAAGAATATAAATGAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | CCCTACTTGGCCATAACACAGCAAATGTGTCTTAAATaGGATACTTTTGTTCCAGAATGGTTCCAAGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PYLAITQQMCLK*DTFVPEWFQEG Trigger: GCCCTCTTGGAACCATTCTGGAACAAAAGTATCCCATTTAAGACACATTTGCTGTGTTATGGCCAAGTAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | CCGAGAAGTGATCTTTCTCATATATATATTTCTTTGGCTGCTGGAGATTTCTTTTGTTCCTCTCCTGCTTaGCTCCGCCATGGTCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: PRSDLSHIYISLAAGDFFCSSPA*LRHGPN Trigger: ATTGGGACCATGGCGGAGCAAAGCAGGAGAGGAACA...AAAGAAATCTCCAGCAGCCAAAGAAATATATATATGAGAAAGATCACTTCTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR CAA 90 bp | CCGAGAAGTGATCTTTCTCATATATATATTTCTTTGGCTGCTGGAGATTTCTTTCCCTGTGCAGGGCTATaGTTGGCACATGTGGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PRSDLSHIYISLAAGDFFPCAGL*LAHVAE Trigger: TTCTGCCACATGTGCCAACAATAGCCCTGCACAGGG...AAAGAAATCTCCAGCAGCCAAAGAAATATATATATGAGAAAGATCACTTCTCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| 3UTR-3UTR CAA 90 bp | CTTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTAGTGTGTCAAAGCACTaGTGTTTCACAAATGTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LTSKERFHEAFGGMPVQLSVSKH*CFTNVA Trigger: TGCCACATTTGTGAAACACAAGTGCTTTGACACACT...AAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTAAATCTGCCACCAGATCTTTaGCATTTCTCTGATCTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LLKRDSMKPLEACLCNLNLPPDL*HFSDLS Trigger: ACTGAGATCAGAGAAATGCAAAAGATCTGGTGGCAG...ATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR TCA 72 bp | GCACCACCTCTGAACTATACCCATATTCCTGTTCACTaGCTCTATGGACTACCAATAGTTGTAGGGAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: APPLNYTHIPVH*LYGLPIVVGKT Trigger: TGTTTTCCCTACAACTATTGGTAGTCCATAGAGTCAGTGAACAGGAATATGGGTATAGTTCAGAGGTGGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR GCA 72 bp | AATGCAATGTTAAATTTGAATAGGATAGGCTGGTCATaGAGCCCAGTGACTTGGGTAGAAATCAGGCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: NAMLNLNRIGWS*SPVTWVEIRPK Trigger: TTTGGGCCTGATTTCTACCCAAGTCACTGGGCTGCATGACCAGCCTATCCTATTCAAATTTAACATTGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | GCTGAACTAATTGGCCTCTTCTTTGGTAAGGGAGTGTaGACATTGATAGTTCTAATGCCTTCATCTGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: AELIGLFFGKGV*TLIVLMPSSGY Trigger: ATACCCAGATGAAGGCATTAGAACTATCAATGTCCACACTCCCTTACCAAAGAAGAGGCCAATTAGTTCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR CCA 72 bp | TTAAAATGTAGCCTTGGCTTTCTTGAAGTGGACACATaGGACCACTTCTCATTGGTAAGGCTTTGGTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LKCSLGFLEVDT*DHFSLVRLWFL Trigger: TAGGAACCAAAGCCTTACCAATGAGAAGTGGTCCCATGTGTCCACTTCAAGAAAGCCAAGGCTACATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCTCAGTATTGAGTATACATACTACATTGTTTATCCCTGGGTTCCAAACTCCCACAGATACCTATCGTaGAGATCAGAGCTGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLSIEYTYYIVYPWVPNSHRYLS*RSELLQ Trigger: CTGAAGCAGCTCTGATCTCAACGATAGGTATCTGTG...GGAGTTTGGAACCCAGGGATAAACAATGTAGTATGTATACTCAATACTGAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR GCA 72 bp | AAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTaGAACTTAAATCATCATGTCTTGCTTCTACTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KRDSMKPLEACL*NLNHHVLLLLE Trigger: TTCAAGTAGAAGCAAGACATGATGATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR GCA 72 bp | CTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATaGCTGTGCAACTTAAATCATCATGTCTTGCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LLKRDSMKPLEA*LCNLNHHVLLL Trigger: TAGAAGCAAGACATGATGATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | CAATACAATGCAATGTTAAATTTGAATAGGATAGGCTaGTCATGCAGCCCAGTGACTTGGGTAGAAATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QYNAMLNLNRIG*SCSPVTWVEIR Trigger: CCTGATTTCTACCCAAGTCACTGGGCTGCATGACCAGCCTATCCTATTCAAATTTAACATTGCATTGTATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | TTCTCACCTAAGAAGTGGGGTTATGTCCCAAAGACATaGTTGCCTCAATTAGCTACAGATAATAACAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: FSPKKWGYVPKT*LPQLATDNNNL Trigger: GAGGTTGTTATTATCTGTAGCTAATTGAGGCAACCATGTCTTTGGGACATAACCCCACTTCTTAGGTGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCTCAGTATTGAGTATACATACTACATTGTTTATCCCTGGGTTCCAAACTCCGTCCCAAAGACATGGTaGCCTCAATTAGCTACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DLSIEYTYYIVYPWVPNSVPKTW*PQLATD Trigger: ATCTGTAGCTAATTGAGGCAACCATGTCTTTGGGAC...GGAGTTTGGAACCCAGGGATAAACAATGTAGTATGTATACTCAATACTGAGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | TTGTGTTTCACAAATGTGGCATTTCTCATCTTTATCTaGGCCCAATTCCCTGTAACCAGTTTTAAATCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LCFTNVAFLIFI*AQFPVTSFKSL Trigger: GAGGGATTTAAAACTGGTTACAGGGAATTGGGCCCAGATAAAGATGAGAAATGCCACATTTGTGAAACACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CCA 72 bp | TCTGAACTATACCCATATTCCTGTTCACTGACTCTATaGACTACCAATAGTTGTAGGGAAAACAGTCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SELYPYSCSLTL*TTNSCRENSPS Trigger: AGAAGGACTGTTTTCCCTACAACTATTGGTAGTCCATAGAGTCAGTGAACAGGAATATGGGTATAGTTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR TCA 72 bp | ACCATGAATGGAGGGCGAAAGTGTCCAGATAGGGATTaGAATAGTCATCTATTATTTCCAGCTGTAAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: TMNGGRKCPDRD*NSHLLFPAVND Trigger: ATCATTTACAGCTGGAAATAATAGATGACTATTTCAATCCCTATCTGGACACTTTCGCCCTCCATTCATGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR GCA 72 bp | AAATGGAAGCTGTTCTCAAACAGCTGCCTGGCTAATTaGTCTCTGACCTTAATGAGGATTTTATATAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: KWKLFSNSCLAN*SLTLMRILYRL Trigger: TAGTCTATATAAAATCCTCATTAAGGTCAGAGAGCAATTAGCCAGGCAGCTGTTTGAGAACAGCTTCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR GCA 72 bp | TATTGTCTTTCATATTCCTATGAAGTAGAGAAAGAGTaGTGTCTTCCCTCACCCTTCCAACTGTATTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: YCLSYSYEVEKE*CLPSPFQLYFS Trigger: TGAGAAATACAGTTGGAAGGGTGAGGGAAGACAGCACTCTTTCTCTACTTCATAGGAATATGAAAGACAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR CCA 72 bp | GGGATACATAAGAAGTACAAACGGAGTAGGAAGTACTaGGAATCTAAAGAAAACCTTCTCCCTAACAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GIHKKYKRSRKY*ESKENLLPNKV Trigger: AACTTTGTTAGGGAGAAGGTTTTCTTTAGATTCCCAGTACTTCCTACTCCGTTTGTACTTCTTATGTATCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTGAGTCTTGATCATTTTAGGGTTGGTGTGCATTTCCATTCTCATAAATCAGGATATATAATAGCCTaGACTTGGGTTTCTCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IVSLDHFRVGVHFHSHKSGYIIA*TWVSPR Trigger: CCTTGGAGAAACCCAAGTCAAGGCTATTATATATCC...TGATTTATGAGAATGGAAATGCACACCAACCCTAAAATGATCAAGACTCACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR TCA 72 bp | TATTCTTTCACAAAGTTTACCACAAATGAACAAAATTaGGCGTCAGTGCTTCAGGTGTATTTCCTGGTACGT | + |
|
Preference number: 3 (lower is better) Translates to: YSFTKFTTNEQN*ASVLQVYFLVR Trigger: ACGTACCAGGAAATACACCTGAAGCACTGACGCTCAATTTTGTTCATTTGTGGTAAACTTTGTGAAAGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR TCA 72 bp | ATCATCATGTCTTGCTTCTACTTGAAATGCAGAAGCTaGGTTTTAAAATGTAGCCTTGGCTTTCTTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: IIMSCFYLKCRS*VLKCSLGFLEV Trigger: CACTTCAAGAAAGCCAAGGCTACATTTTAAAACTCAGCTTCTGCATTTCAAGTAGAAGCAAGACATGATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAACAAGTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTTGACTGACGCAATGTTGACATATTaGGCCAAAATCACTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EEQVCAKSESYTPNTLTDAMLTY*AKITLK Trigger: CTTCAGAGTGATTTTGGCCAAATATGTCAACATTGC...GTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATACTTGTTCTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAACAAGTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTTGACTGACACGCATATTGCAATGTaGACATATTTGGCCAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: EEQVCAKSESYTPNTLTDTHIAM*TYLAKI Trigger: GATTTTGGCCAAATATGTCAACATTGCAATATGCGT...GTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATACTTGTTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR TCA 72 bp | GATCTTTTAATGAATATCTCATGTGAGGTACTAGCTTaGCATGATGGTACTGACAGAAACAACAAGGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: DLLMNISCEVLA*HDGTDRNNKVC Trigger: ACAAACCTTGTTGTTTCTGTCAGTACCATCATGTCAAGCTAGTACCTCACATGAGATATTCATTAAAAGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR TCA 72 bp | CAAAACCTTCCCAGTCCAGATGATATAACTGTTATATaGTCTTTCCACTCAATAGCAAAGACATCCAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: QNLPSPDDITVI*SFHSIAKTSNK Trigger: TTTGTTGGATGTCTTTGCTATTGAGTGGAAAGATCATATAACAGTTATATCATCTGGACTGGGAAGGTTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR GCA 72 bp | TTTCTAGAAATATCTCTCTACTGCCACCAGATCTTTTaGATTTCTCTGATCTCAGTATTGAGTATACATACT | + |
|
Preference number: 3 (lower is better) Translates to: FLEISLYCHQIF*ISLISVLSIHT Trigger: AGTATGTATACTCAATACTGAGATCAGAGAAATGCAAAAGATCTGGTGGCAGTAGAGAGATATTTCTAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR GCA 90 bp | GTTGATACCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATGCAGGGTGTCGAGGTTaGCCGGGCTGTCCAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VDTLCRAIVGTCGRISSHAGCRG*PGCPSG Trigger: GCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGC...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGTATCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAACATCCCTGTGAGGTAGGAGCAGGGTGTCGAGGTTaGCCGGGCTGTCCAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERERKQMDVASQHPCEVGAGCRG*PGCPSG Trigger: GCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGC...TCCTACCTCACAGGGATGTTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR GCA 90 bp | GGTGTATTTCCTGGTACGTGCTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAGACTTTCGTCTGCTTGTaGCGCCACCATGTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVFPGTCSDKAAVLWVYQTFVCL*RHHVPG Trigger: GCCGGGGACATGGTGGCGGCACAAGCAGACGAAAGT...CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | GTTGATACCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATGCACTCTGGCCTCAGTaGGGTTCACCCGACGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VDTLCRAIVGTCGRISSHALWPQ*GSPDVR Trigger: TCGCACGTCGGGTGAACCTCACTGAGGCCAGAGTGC...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGTATCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| 3UTR CAA 72 bp | CCTTGCCACTATGCAAGTCCAGCCCTCCCTCTACAATaGGCACTCCTGACCAGTACTACAGAGCCAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PCHYASPALPLQ*ALLTSTTEPSH Trigger: ATGGCTTGGCTCTGTAGTACTGGTCAGGAGTGCCAATTGTAGAGGGAGGGCTGGACTTGCATAGTGGCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR TCA 90 bp | TGTACAAGAGGAATCAGCCTCTTTCCCTTGCCACTATGCAAGTCCAGCCCTCCCAGCAGTCACGTCTCCTaGGTAGGACTTGAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CTRGISLFPLPLCKSSPPSSHVS*VGLEER Trigger: TCTCTCCTCAAGTCCTACTCAGGAGACGTGACTGCT...GGGAGGGCTGGACTTGCATAGTGGCAAGGGAAAGAGGCTGATTCCTCTTGTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR GCA 90 bp | GATCTCAGTATTGAGTATACATACTACATTGTTTATCCCTGGGTTCCAAACTCCCCGCCCAGCGCCGGTTaGCGCTCCAGAACGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DLSIEYTYYIVYPWVPNSPPSAG*RSRTCP Trigger: CGGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGG...GGAGTTTGGAACCCAGGGATAAACAATGTAGTATGTATACTCAATACTGAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR GCA 90 bp | TCCCCGGCGGATGAAGATATGACAGAACAGGATAGGTGTCTTATGGTTTTTGATGCTGAGGGGTGTCGCTaGCACTGGTCAGTCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPADEDMTEQDRCLMVFDAEGCR*HWSVPV Trigger: CACCGGGACTGACCAGTGGCAGCGACACCCCTCAGC...ATCAAAAACCATAAGACACCTATCCTGTTCTGTCATATCTTCATCCGCCGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR CAA 72 bp | GAGGGGCACTGTACAAGAGGAATCAGCCTCTTTCCCTaGCCACTATGCAAGTCCAGCCCTCCCTCTACAATT | + |
|
Preference number: 4 (lower is better) Translates to: EGHCTRGISLFP*PLCKSSPPSTI Trigger: AATTGTAGAGGGAGGGCTGGACTTGCATAGTGGCAAGGGAAAGAGGCTGATTCCTCTTGTACAGTGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAAGGGTGTCGCTGCCACTaGTCAGTCCCGGTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERERKQMDVASQGCRCH*SVPVTP Trigger: TGGAGTCACCGGGACTGACCAGTGGCAGCGACACCC...TTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | TCCCCGGCGGATGAAGATATGACAGAACAGGATAGGTGTCTTATGGTTTTTGATTGGTCATTGTCCTGCTaGGGGGTGTCGCTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPADEDMTEQDRCLMVFDWSLSC*GVSLPL Trigger: CAGTGGCAGCGACACCCCTCAGCAGGACAATGACCA...ATCAAAAACCATAAGACACCTATCCTGTTCTGTCATATCTTCATCCGCCGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAATGGTCATTGTCCTGCTaGGGGGTGTCGCTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERERKQMDVASQWSLSC*GVSLPL Trigger: CAGTGGCAGCGACACCCCTCAGCAGGACAATGACCA...TTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | GGTGTATTTCCTGGTACGTGCTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAGGCAGTTGGCTGCTGTTaGATGTTGTCCTGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVFPGTCSDKAAVLWVYQAVGCC*MLSCFS Trigger: GGAGAAACAGGACAACATTCAACAGCAGCCAACTGC...CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR GCA 90 bp | CCGAGAAGTGATCTTTCTCATATATATATTTCTTTGGCTGCTGGAGATTTCTTTCCGCCCAGCGCCGGTTaGCGCTCCAGAACGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PRSDLSHIYISLAAGDFFPPSAG*RSRTCP Trigger: CGGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGG...AAAGAAATCTCCAGCAGCCAAAGAAATATATATATGAGAAAGATCACTTCTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR GCA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATACTTTCGTCTGCTTGTaGCGCCACCATGTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDTFVCL*RHHVPG Trigger: GCCGGGGACATGGTGGCGGCACAAGCAGACGAAAGT...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR GCA 90 bp | AAGAAGTACAAACGGAGTAGGAAGTACTGGGAATCTAAAGAAAACCTTCTCCCTGCTGAGGGGTGTCGCTaGCACTGGTCAGTCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KKYKRSRKYWESKENLLPAEGCR*HWSVPV Trigger: CACCGGGACTGACCAGTGGCAGCGACACCCCTCAGC...AGGGAGAAGGTTTTCTTTAGATTCCCAGTACTTCCTACTCCGTTTGTACTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR GCA 90 bp | GTTGATACCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATCGAGGTACGATGGGTTaGTCCACAGCAGTCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VDTLCRAIVGTCGRISSHRGTMG*STAVTS Trigger: AGACGTGACTGCTGTGGAGCAACCCATCGTACCTCG...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGTATCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| CDS-3UTR CCA 90 bp | GGTGTATTTCCTGGTACGTGCTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAGCCTTCAGTCTCAGGTTaGCAATGCTGTTGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GVFPGTCSDKAAVLWVYQPSVSG*QCCWPC Trigger: ACATGGCCAACAGCATTGCCAACCTGAGACTGAAGG...CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027878.14 |
||
| CDS-3UTR TCA 90 bp | GCATGGCAACGTGGTTTGGTCAAGTTCACCAGGAAAATTGCCAAAGCAAAGCTGAGCAGTCACGTCTCCTaGGTAGGACTTGAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AWQRGLVKFTRKIAKAKLSSHVS*VGLEER Trigger: TCTCTCCTCAAGTCCTACTCAGGAGACGTGACTGCT...CAGCTTTGCTTTGGCAATTTTCCTGGTGAACTTGACCAAACCACGTTGCCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | GTTGATACCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATAGCAGTCACGTCTCCTaGGTAGGACTTGAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VDTLCRAIVGTCGRISSHSSHVS*VGLEER Trigger: TCTCTCCTCAAGTCCTACTCAGGAGACGTGACTGCT...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGTATCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| CDS-3UTR GCA 90 bp | GAAACAAAGAAATACCAGCTCTGCCTCCCACCCTCGATGCTAAACCTCATTTCATGGCTCGCTCATTCCTaGGGAACTTGGCTCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETKKYQLCLPPSMLNLISWLAHS*GTWLFG Trigger: ACCGAAGAGCCAAGTTCCGCAGGAATGAGCGAGCCA...TGAAATGAGGTTTAGCATCGAGGGTGGGAGGCAGAGCTGGTATTTCTTTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAACATCCCTGTGAGGTAGGATGGCTCGCTCATTCCTaGGGAACTTGGCTCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERERKQMDVASQHPCEVGWLAHS*GTWLFG Trigger: ACCGAAGAGCCAAGTTCCGCAGGAATGAGCGAGCCA...TCCTACCTCACAGGGATGTTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | GCATGGCAACGTGGTTTGGTCAAGTTCACCAGGAAAATTGCCAAAGCAAAGCTGGGTCTAGCAGGTGACTaGCGGAGAAGTTCTTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AWQRGLVKFTRKIAKAKLGLAGD*RRSSFS Trigger: CGAAAAAGAACTTCTCCGTCAGTCACCTGCTAGACC...CAGCTTTGCTTTGGCAATTTTCCTGGTGAACTTGACCAAACCACGTTGCCATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | ACAGAGGTCAGAGGCCATCTCTTTGGTTTGTCGTCTTGTCAAGGCAAGAGCAATGGTCTAGCAGGTGACTaGCGGAGAAGTTCTTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TEVRGHLFGLSSCQGKSNGLAGD*RRSSFS Trigger: CGAAAAAGAACTTCTCCGTCAGTCACCTGCTAGACC...ATTGCTCTTGCCTTGACAAGACGACAAACCAAAGAGATGGCCTCTGACCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR TCA 90 bp | TTCCAATACAATGCAATGTTAAATTTGAATAGGATAGGCTGGTCATGCAGCCCAGCACTCTGGCCTCAGTaGGGTTCACCCGACGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FQYNAMLNLNRIGWSCSPALWPQ*GSPDVR Trigger: TCGCACGTCGGGTGAACCTCACTGAGGCCAGAGTGC...TGGGCTGCATGACCAGCCTATCCTATTCAAATTTAACATTGCATTGTATTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGCTCTAAAGGTTGACCAAGAGAAAGATCTTTTAATGAATATCTCATGTGCAGGGTGTCGAGGTTaGCCGGGCTGTCCAAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSALKVDQEKDLLMNISCAGCRG*PGCPSG Trigger: GCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGC...ACATGAGATATTCATTAAAAGATCTTTCTCTTGGTCAACCTTTAGAGCACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAACATCCCTGTGAGGTAGGAAAGTTCTTTTTCGCCTaGAGGGTGTCGAGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ERERKQMDVASQHPCEVGKFFFA*RVSRLP Trigger: GGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTT...TCCTACCTCACAGGGATGTTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR GCA 90 bp | GGGGACAGAGGTTACTTTTCAGCCCATGATTCTGACCATAGGCAAATAACTGCTAAGTTCTTTTTCGCCTaGAGGGTGTCGAGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GDRGYFSAHDSDHRQITAKFFFA*RVSRLP Trigger: GGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTT...AGCAGTTATTTGCCTATGGTCAGAATCATGGGCTGAAAAGTAACCTCTGTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR GCA 90 bp | AAGCACTTGTGTTTCACAAATGTGGCATTTCTCATCTTTATCTGGGCCCAATTCACTTTCGTCTGCTTGTaGCGCCACCATGTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KHLCFTNVAFLIFIWAQFTFVCL*RHHVPG Trigger: GCCGGGGACATGGTGGCGGCACAAGCAGACGAAAGT...GAATTGGGCCCAGATAAAGATGAGAAATGCCACATTTGTGAAACACAAGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAACAGGACGAGGTACGATaGGTTGCTCCACAGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERERKQMDVASQQDEVR*VAPQQS Trigger: TGACTGCTGTGGAGCAACCCATCGTACCTCGTCCTG...TTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR CCA 90 bp | CTTACTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTCAGGACGAGGTACGATaGGTTGCTCCACAGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSKERFHEAFGGMPVQLQDEVR*VAPQQS Trigger: TGACTGCTGTGGAGCAACCCATCGTACCTCGTCCTG...AAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAACATCCCTGTGAGGTAGGAGATAATCGGTTGGTCTaGGAGCAGGACGAGGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: ERERKQMDVASQHPCEVGDNRLV*EQDEVR Trigger: TCGTACCTCGTCCTGCTCCCAGACCAACCGATTATC...TCCTACCTCACAGGGATGTTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR CCA 90 bp | GGGGACAGAGGTTACTTTTCAGCCCATGATTCTGACCATAGGCAAATAACTGCTGATAATCGGTTGGTCTaGGAGCAGGACGAGGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: GDRGYFSAHDSDHRQITADNRLV*EQDEVR Trigger: TCGTACCTCGTCCTGCTCCCAGACCAACCGATTATC...AGCAGTTATTTGCCTATGGTCAGAATCATGGGCTGAAAAGTAACCTCTGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAAAAGTTCTTTTTCGCCTaGAGGGTGTCGAGGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERERKQMDVASQKFFFA*RVSRLP Trigger: GGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTT...TTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACAAATGGATGTAGCCTCACAAGGTCTAGCAGGTGACTaGCGGAGAAGTTCTTTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERERKQMDVASQGLAGD*RRSSFS Trigger: CGAAAAAGAACTTCTCCGTCAGTCACCTGCTAGACC...TTGTGAGGCTACATCCATTTGTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATGCAGTTGGCTGCTGTTaGATGTTGTCCTGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDAVGCC*MLSCFS Trigger: GGAGAAACAGGACAACATTCAACAGCAGCCAACTGC...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | GAAGAACAAGTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTTGACTGACGCACTCTGGCCTCAGTaGGGTTCACCCGACGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EEQVCAKSESYTPNTLTDALWPQ*GSPDVR Trigger: TCGCACGTCGGGTGAACCTCACTGAGGCCAGAGTGC...GTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATACTTGTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR CCA 90 bp | GAAGAACAAGTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTTGACTGACGGGTGTCGCTGCCACTaGTCAGTCCCGGTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EEQVCAKSESYTPNTLTDGCRCH*SVPVTP Trigger: TGGAGTCACCGGGACTGACCAGTGGCAGCGACACCC...GTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATACTTGTTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR CCA 90 bp | AGGAGTGCTCTAAAGGTTGACCAAGAGAAAGATCTTTTAATGAATATCTCATGTGGGTGTCGCTGCCACTaGTCAGTCCCGGTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSALKVDQEKDLLMNISCGCRCH*SVPVTP Trigger: TGGAGTCACCGGGACTGACCAGTGGCAGCGACACCC...ACATGAGATATTCATTAAAAGATCTTTCTCTTGGTCAACCTTTAGAGCACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 72 bp | CCACTTCCTCCTTTGAGTTTATGGGATCAGGTTTGTTaGACGTCCACTGGAAATGGATGCCAGGATGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLPPLSLWDQVC*TSTGNGCQDEG Trigger: ACCTTCATCCTGGCATCCATTTCCAGTGGACGTCAAACAAACCTGATCCCATAAACTCAAAGGAGGAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR CAA 72 bp | AGATGCCCACACTGGGGCATGTCTCTTTGGTTCAGATaGCCTAACTTGATGCTAGTTCAGGAAGGATCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RCPHWGMSLWFR*PNLMLVQEGSH Trigger: ATGAGATCCTTCCTGAACTAGCATCAAGTTAGGCAATCTGAACCAAAGAGACATGCCCCAGTGTGGGCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 72 bp | GGCTTTCTTGAAGTGGACACATGGGACCACTTCTCATaGGTAAGGCTTTGGTTCCTATCGCTTGTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GFLEVDTWDHFS*VRLWFLSLVLF Trigger: GAACAGAACAAGCGATAGGAACCAAAGCCTTACCAATGAGAAGTGGTCCCATGTGTCCACTTCAAGAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR TCA 90 bp | CTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTAAATGCAGTTGGCTGCTGTTaGATGTTGTCCTGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKRDSMKPLEACLCNLNAVGCC*MLSCFS Trigger: GGAGAAACAGGACAACATTCAACAGCAGCCAACTGC...ATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR TCA 90 bp | GAAACAAAGAAATACCAGCTCTGCCTCCCACCCTCGATGCTAAACCTCATTTCACTCCTGAGTAGGACTTaGGGAGAGAAGCGTTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ETKKYQLCLPPSMLNLISLLSRT*GEKRFY Trigger: ATAAAAACGCTTCTCTCCTCAAGTCCTACTCAGGAG...TGAAATGAGGTTTAGCATCGAGGGTGGGAGGCAGAGCTGGTATTTCTTTGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | CAAAATACACACACAAAAGCAAATGGTGATGGTAGGTATCCGAGAGCAAGAAGATGCTGTTGGCCATGTTaGTACCCTGTGCAGGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QNTHTKANGDGRYPRARRCCWPC*YPVQGY Trigger: ATAGCCCTGCACAGGGTATCAACATGGCCAACAGCA...TCTTCTTGCTCTCGGATACCTACCATCACCATTTGCTTTTGTGTGTGTATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027878.14 |
||
| CDS-3UTR GCA 90 bp | TTCCAATACAATGCAATGTTAAATTTGAATAGGATAGGCTGGTCATGCAGCCCACGAGGTACGATGGGTTaGTCCACAGCAGTCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQYNAMLNLNRIGWSCSPRGTMG*STAVTS Trigger: AGACGTGACTGCTGTGGAGCAACCCATCGTACCTCG...TGGGCTGCATGACCAGCCTATCCTATTCAAATTTAACATTGCATTGTATTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCGGCGGATGAAGATATGACAGAACAGGATAGGTGTCTTATGGTTTTTGATGAGAAGCGTTTTTATTaGCCAGCATGGCTCGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPADEDMTEQDRCLMVFDEKRFY*PAWLAH Trigger: ATGAGCGAGCCATGCTGGCCAATAAAAACGCTTCTC...ATCAAAAACCATAAGACACCTATCCTGTTCTGTCATATCTTCATCCGCCGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR TCA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATCTCCTGAGTAGGACTTaGGGAGAGAAGCGTTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDLLSRT*GEKRFY Trigger: ATAAAAACGCTTCTCTCCTCAAGTCCTACTCAGGAG...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR CCA 90 bp | GCATGGCAACGTGGTTTGGTCAAGTTCACCAGGAAAATTGCCAAAGCAAAGCTGTTGACTGTTGGCACCTaGTTCCTCTGTAAACTATAT | + |
|
Preference number: 4 (lower is better) Translates to: AWQRGLVKFTRKIAKAKLLTVGT*FLCKLY Trigger: ATATAGTTTACAGAGGAACCAGGTGCCAACAGTCAA...CAGCTTTGCTTTGGCAATTTTCCTGGTGAACTTGACCAAACCACGTTGCCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027878.14 |
||
| 3UTR CAA 72 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATaGGGATACATAAGAAGTACAAACGGAGTAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ERERERERERER*GYIRSTNGVGS Trigger: ACTTCCTACTCCGTTTGTACTTCTTATGTATCCCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 72 bp | GGTTTCTCTCATTCTTACAGACACAGATACCTATCGTaGAGATCAGAGCTGCTTCAGGCTAAGTTCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFSHSYRHRYLS*RSELLQAKFTR Trigger: CCTTGTGAACTTAGCCTGAAGCAGCTCTGATCTCAACGATAGGTATCTGTGTCTGTAAGAATGAGAGAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 72 bp | CACTGGGGCATGTCTCTTTGGTTCAGATTGCCTAACTaGATGCTAGTTCAGGAAGGATCTCATTTCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: HWGMSLWFRLPN*MLVQEGSHFHL Trigger: CAAATGGAAATGAGATCCTTCCTGAACTAGCATCAAGTTAGGCAATCTGAACCAAAGAGACATGCCCCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGCTCTAAAGGTTGACCAAGAGAAAGATCTTTTAATGAATATCTCATGTTGGCTCGCTCATTCCTaGGGAACTTGGCTCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSALKVDQEKDLLMNISCWLAHS*GTWLFG Trigger: ACCGAAGAGCCAAGTTCCGCAGGAATGAGCGAGCCA...ACATGAGATATTCATTAAAAGATCTTTCTCTTGGTCAACCTTTAGAGCACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR GCA 90 bp | GAAGAACAAGTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTTGACTGACCGAGGTACGATGGGTTaGTCCACAGCAGTCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EEQVCAKSESYTPNTLTDRGTMG*STAVTS Trigger: AGACGTGACTGCTGTGGAGCAACCCATCGTACCTCG...GTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATACTTGTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR GCA 90 bp | CAAAATACACACACAAAAGCAAATGGTGATGGTAGGTATCCGAGAGCAAGAAGACATGTTGATACCCTGTaGAGGGCTATTGTTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QNTHTKANGDGRYPRARRHVDTL*RAIVGT Trigger: TGTGCCAACAATAGCCCTGCACAGGGTATCAACATG...TCTTCTTGCTCTCGGATACCTACCATCACCATTTGCTTTTGTGTGTGTATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027878.14 |
||
| CDS-3UTR CCA 90 bp | GAAGAACAAGTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTTGACTGACCAGGACGAGGTACGATaGGTTGCTCCACAGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EEQVCAKSESYTPNTLTDQDEVR*VAPQQS Trigger: TGACTGCTGTGGAGCAACCCATCGTACCTCGTCCTG...GTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATACTTGTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR CCA 90 bp | CAAAATACACACACAAAAGCAAATGGTGATGGTAGGTATCCGAGAGCAAGAAGAGTGCAGGGCTATTGTTaGCACATGTGGCAGAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: QNTHTKANGDGRYPRARRVQGYC*HMWQNK Trigger: CTTATTCTGCCACATGTGCCAACAATAGCCCTGCAC...TCTTCTTGCTCTCGGATACCTACCATCACCATTTGCTTTTGTGTGTGTATTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027878.14 |
||
| CDS-3UTR CCA 90 bp | CCGAGAAGTGATCTTTCTCATATATATATTTCTTTGGCTGCTGGAGATTTCTTTGATAATCGGTTGGTCTaGGAGCAGGACGAGGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: PRSDLSHIYISLAAGDFFDNRLV*EQDEVR Trigger: TCGTACCTCGTCCTGCTCCCAGACCAACCGATTATC...AAAGAAATCTCCAGCAGCCAAAGAAATATATATATGAGAAAGATCACTTCTCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR CAA 72 bp | TCACCTAAGAAGTGGGGTTATGTCCCAAAGACATGGTaGCCTCAATTAGCTACAGATAATAACAACCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPKKWGYVPKTW*PQLATDNNNLC Trigger: ACAGAGGTTGTTATTATCTGTAGCTAATTGAGGCAACCATGTCTTTGGGACATAACCCCACTTCTTAGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR CCA 90 bp | GAAGAACAAGTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTTGACTGACGAGAAGCGTTTTTATTaGCCAGCATGGCTCGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EEQVCAKSESYTPNTLTDEKRFY*PAWLAH Trigger: ATGAGCGAGCCATGCTGGCCAATAAAAACGCTTCTC...GTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATACTTGTTCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR CAA 72 bp | TCCTACACTTGGAGTAATTACACGTTGATTCCCTACTaGGCCATAACACAGCAAATGTGTCTTAAATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SYTWSNYTLIPY*AITQQMCLKWD Trigger: ATCCCATTTAAGACACATTTGCTGTGTTATGGCCAAGTAGGGAATCAACGTGTAATTACTCCAAGTGTAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 72 bp | GAAAACTTACTTCTAAAGAGAGATTCCATGAAGCCTTaGGAGGCATGCCTGTGCAACTTAAATCATCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ENLLLKRDSMKP*EACLCNLNHHV Trigger: GACATGATGATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAGTAAGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGTTTTAAATCCCTCCATGGGTCAAGCATTAACTTTAAAAAGATACACAGACTCCTGAGTAGGACTTaGGGAGAGAAGCGTTTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: TSFKSLHGSSINFKKIHRLLSRT*GEKRFY Trigger: ATAAAAACGCTTCTCTCCTCAAGTCCTACTCAGGAG...TCTGTGTATCTTTTTAAAGTTAATGCTTGACCCATGGAGGGATTTAAAACTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 72 bp | TGCCACCAGATCTTTTGCATTTCTCTGATCTCAGTATaGAGTATACATACTACATTGTTTATCCCTGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHQIFCISLISV*SIHTTLFIPGF Trigger: GAACCCAGGGATAAACAATGTAGTATGTATACTCAATACTGAGATCAGAGAAATGCAAAAGATCTGGTGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 72 bp | TTGGAGGCATGCCTGTGCAACTTAAATCATCATGTCTaGCTTCTACTTGAAATGCAGAAGCTGAGTTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEACLCNLNHHV*LLLEMQKLSFK Trigger: TTTAAAACTCAGCTTCTGCATTTCAAGTAGAAGCAAGACATGATGATTTAAGTTGCACAGGCATGCCTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| 3UTR CAA 72 bp | ACGCCAAATACTTTGACTGACACGCATATTGCAATGTaGACATATTTGGCCAAAATCACTCTGAAGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPNTLTDTHIAM*TYLAKITLKIF Trigger: GAAAATCTTCAGAGTGATTTTGGCCAAATATGTCAACATTGCAATATGCGTGTCAGTCAAAGTATTTGGCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| 3UTR CAA 72 bp | GTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTaGACTGACACGCATATTGCAATGTTGACATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCAKSESYTPNT*TDTHIAMLTYL Trigger: CAAATATGTCAACATTGCAATATGCGTGTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS TCA 90 bp | GTCATTGTCCTGCTGAGGGGTGTCGCTGCCACTGGTCAGTCCCGGTaGCTCCAGCAGGCTCCGGCCCGCCTCGCCCACACTTTCGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VIVLLRGVAATGQSR*LQQAPARLAHTFVC Trigger: GCAGACGAAAGTGTGGGCGAGGCGGGCCGGAGCCTGCTGGAGTCACCGGGACTGACCAGTGGCAGCGACACCCCTCAGCAGGACAATGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
||
| CDS CCA 90 bp | CAGAGTTCAACTGGTCATTGTCCTGCTGAGGGGTGTCGCTGCCACTaGTCAGTCCCGGTGACTCCAGCAGGCTCCGGCCCGCCTCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QSSTGHCPAEGCRCH*SVPVTPAGSGPPRP Trigger: TGGGCGAGGCGGGCCGGAGCCTGCTGGAGTCACCGGGACTGACCAGTGGCAGCGACACCCCTCAGCAGGACAATGACCAGTTGAACTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
||
| CDS GCA 90 bp | TCTCCTCAGAGTTCAACTGGTCATTGTCCTGCTGAGGGGTGTCGCTaGCACTGGTCAGTCCCGGTGACTCCAGCAGGCTCCGGCCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPQSSTGHCPAEGCR*HWSVPVTPAGSGPP Trigger: AGGCGGGCCGGAGCCTGCTGGAGTCACCGGGACTGACCAGTGGCAGCGACACCCCTCAGCAGGACAATGACCAGTTGAACTCTGAGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
||
| CDS CCA 90 bp | CGCTGTACGGAGAGGCTGTCCCCCAGGAGAGATAATCGGTTGGTCTaGGAGCAGGACGAGGTACGATGGGTTGCTCCACAGCAGTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: RCTERLSPRRDNRLV*EQDEVRWVAPQQSR Trigger: ACGTGACTGCTGTGGAGCAACCCATCGTACCTCGTCCTGCTCCCAGACCAACCGATTATCTCTCCTGGGGGACAGCCTCTCCGTACAGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027878.14 |
||
| CDS-3UTR CAA 90 bp | GGTGTATTTCCTGGTACGTGCTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAGTGCAGGGTGTCGAGGTaGCCCGGGCTGTCCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GVFPGTCSDKAAVLWVYQCRVSR*PGLSKR Trigger: CCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCA...CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS CCA 90 bp | ATCTGTACGGAGAGGCTGTCCCCCAGGAGAGATAATCGGTTGGTCTaGGAGCAGGACGAGGTACGATGGGTTGCTCCACAGCAGTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: ICTERLSPRRDNRLV*EQDEVRWVAPQQSR Trigger: ACGTGACTGCTGTGGAGCAACCCATCGTACCTCGTCCTGCTCCCAGACCAACCGATTATCTCTCCTGGGGGACAGCCTCTCCGTACAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| CDS CCA 90 bp | CGAAGATCTGTACGGAGAGGCTGTCCCCCAGGAGAGATAATCGGTTaGTCTGGGAGCAGGACGAGGTACGATGGGTTGCTCCACAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRSVRRGCPPGEIIG*SGSRTRYDGLLHSS Trigger: ACTGCTGTGGAGCAACCCATCGTACCTCGTCCTGCTCCCAGACCAACCGATTATCTCTCCTGGGGGACAGCCTCTCCGTACAGATCTTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| CDS-3UTR CAA 90 bp | TCCCCGGCGGATGAAGATATGACAGAACAGGATAGGTGTCTTATGGTTTTTGATGCCGCCCAGCGCCGGTaGCCGCTCCAGAACGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPADEDMTEQDRCLMVFDAAQRR*PLQNVP Trigger: GGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGGC...ATCAAAAACCATAAGACACCTATCCTGTTCTGTCATATCTTCATCCGCCGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
||
| CDS-3UTR CAA 90 bp | GTTGATACCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATTGCAGGGTGTCGAGGTaGCCCGGGCTGTCCAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VDTLCRAIVGTCGRISSHCRVSR*PGLSKR Trigger: CCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCA...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGTATCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| CDS GCA 90 bp | CTGAAACCACACCTGCACTCTGGCCTCAGTGAGGTTCACCCGACGTaGGAGATCTTCTCGAACAAAAGCATCCGGGTAATGTGTCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LKPHLHSGLSEVHPT*EIFSNKSIRVMCPL Trigger: GAGCGGACACATTACCCGGATGCTTTTGTTCGAGAAGATCTCGCACGTCGGGTGAACCTCACTGAGGCCAGAGTGCAGGTGTGGTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
||
| CDS TCA 90 bp | AGCAGGACGAGGTACGATGGGTTGCTCCACAGCAGTCACGTCTCCTaGGTAGGACTTGAGGAGAGAAGCGTTTTTATTGGCCAGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRTRYDGLLHSSHVS*VGLEERSVFIGQHG Trigger: GCCATGCTGGCCAATAAAAACGCTTCTCTCCTCAAGTCCTACTCAGGAGACGTGACTGCTGTGGAGCAACCCATCGTACCTCGTCCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
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| CDS-3UTR CAA 90 bp | TTCCAATACAATGCAATGTTAAATTTGAATAGGATAGGCTGGTCATGCAGCCCAGCCGCCCAGCGCCGGTaGCCGCTCCAGAACGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FQYNAMLNLNRIGWSCSPAAQRR*PLQNVP Trigger: GGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGGC...TGGGCTGCATGACCAGCCTATCCTATTCAAATTTAACATTGCATTGTATTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| CDS TCA 90 bp | GTACGATGGGTTGCTCCACAGCAGTCACGTCTCCTGAGTAGGACTTaGGGAGAGAAGCGTTTTTATTGGCCAGCATGGCTCGCTCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRWVAPQQSRLLSRT*GEKRFYWPAWLAHS Trigger: GGAATGAGCGAGCCATGCTGGCCAATAAAAACGCTTCTCTCCTCAAGTCCTACTCAGGAGACGTGACTGCTGTGGAGCAACCCATCGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
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| CDS-3UTR CAA 90 bp | GTTGAGAAGGAATCACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTGCCGCCCAGCGCCGGTaGCCGCTCCAGAACGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VEKESLHEIKVHKMIFLLAAQRR*PLQNVP Trigger: GGGCACGTTCTGGAGCGGCAACCGGCGCTGGGCGGC...AAGAAGGAAGATCATCTTGTGTACTTTGATCTCATGAAGTGATTCCTTCTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | ACAGAGGTCAGAGGCCATCTCTTTGGTTTGTCGTCTTGTCAAGGCAAGAGCAATCACACTTTCGTCTGCTaGTGCCGCCACCATGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TEVRGHLFGLSSCQGKSNHTFVC*CRHHVP Trigger: GGGGACATGGTGGCGGCACAAGCAGACGAAAGTGTG...ATTGCTCTTGCCTTGACAAGACGACAAACCAAAGAGATGGCCTCTGACCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| CDS-3UTR CAA 90 bp | ATGCAGCCCAGTGACTTGGGTAGAAATCAGGCCCAAAAGTACTGTTCCAACTCTACGAGGTACGATGGGTaGCTCCACAGCAGTCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: MQPSDLGRNQAQKYCSNSTRYDG*LHSSHV Trigger: GACGTGACTGCTGTGGAGCAACCCATCGTACCTCGT...AGAGTTGGAACAGTACTTTTGGGCCTGATTTCTACCCAAGTCACTGGGCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| CDS-3UTR CAA 90 bp | GGTGTATTTCCTGGTACGTGCTCAGATAAAGCTGCTGTGCTGTGGGTCTACCAGATGCTGTTGGCCATGTaGATACCCTGTGCAGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GVFPGTCSDKAAVLWVYQMLLAM*IPCAGL Trigger: TAGCCCTGCACAGGGTATCAACATGGCCAACAGCAT...CTGGTAGACCCACAGCACAGCAGCTTTATCTGAGCACGTACCAGGAAATACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027878.14 |
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| CDS-3UTR CAA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATCACACTTTCGTCTGCTaGTGCCGCCACCATGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDHTFVC*CRHHVP Trigger: GGGGACATGGTGGCGGCACAAGCAGACGAAAGTGTG...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | GCATGGCAACGTGGTTTGGTCAAGTTCACCAGGAAAATTGCCAAAGCAAAGCTGGCCTTCAGTCTCAGGTaGGCAATGCTGTTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: AWQRGLVKFTRKIAKAKLAFSLR*AMLLAM Trigger: CATGGCCAACAGCATTGCCAACCTGAGACTGAAGGC...CAGCTTTGCTTTGGCAATTTTCCTGGTGAACTTGACCAAACCACGTTGCCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027878.14 |
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| CDS-3UTR CAA 90 bp | GCATGGCAACGTGGTTTGGTCAAGTTCACCAGGAAAATTGCCAAAGCAAAGCTGCTCCAAGGCCTGCAGTaGGCTGCTGTTGAATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AWQRGLVKFTRKIAKAKLLQGLQ*AAVECC Trigger: ACAACATTCAACAGCAGCCAACTGCAGGCCTTGGAG...CAGCTTTGCTTTGGCAATTTTCCTGGTGAACTTGACCAAACCACGTTGCCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | GTTGATACCCTGTGCAGGGCTATTGTTGGCACATGTGGCAGAATAAGTAGCCATAGAGAAGCGTTTTTATaGGCCAGCATGGCTCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VDTLCRAIVGTCGRISSHREAFL*ASMARS Trigger: TGAGCGAGCCATGCTGGCCAATAAAAACGCTTCTCT...ATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGTATCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATAGGAGAGATAATCGGTaGGTCTGGGAGCAGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDRRDNR*VWEQDE Trigger: CTCGTCCTGCTCCCAGACCAACCGATTATCTCTCCT...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | ATGCAGCCCAGTGACTTGGGTAGAAATCAGGCCCAAAAGTACTGTTCCAACTCTTGCAGTTGGCTGCTGTaGAATGTTGTCCTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MQPSDLGRNQAQKYCSNSCSWLL*NVVLFL Trigger: GAGAAACAGGACAACATTCAACAGCAGCCAACTGCA...AGAGTTGGAACAGTACTTTTGGGCCTGATTTCTACCCAAGTCACTGGGCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| CDS-3UTR CAA 90 bp | GAAACAAAGAAATACCAGCTCTGCCTCCCACCCTCGATGCTAAACCTCATTTCAAGAGAAGCGTTTTTATaGGCCAGCATGGCTCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ETKKYQLCLPPSMLNLISREAFL*ASMARS Trigger: TGAGCGAGCCATGCTGGCCAATAAAAACGCTTCTCT...TGAAATGAGGTTTAGCATCGAGGGTGGGAGGCAGAGCTGGTATTTCTTTGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | AATGTCTCTGAAGAGGTAAACCCAGTAAGGAATGTCAGCCAGCTGCAAAAGCAGAGAGAAGCGTTTTTATaGGCCAGCATGGCTCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NVSEEVNPVRNVSQLQKQREAFL*ASMARS Trigger: TGAGCGAGCCATGCTGGCCAATAAAAACGCTTCTCT...CTGCTTTTGCAGCTGGCTGACATTCCTTACTGGGTTTACCTCTTCAGAGACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| CDS-3UTR CAA 90 bp | CAAAATACACACACAAAAGCAAATGGTGATGGTAGGTATCCGAGAGCAAGAAGAACGAGGTACGATGGGTaGCTCCACAGCAGTCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: QNTHTKANGDGRYPRARRTRYDG*LHSSHV Trigger: GACGTGACTGCTGTGGAGCAACCCATCGTACCTCGT...TCTTCTTGCTCTCGGATACCTACCATCACCATTTGCTTTTGTGTGTGTATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | CTTCTAAAGAGAGATTCCATGAAGCCTTTGGAGGCATGCCTGTGCAACTTAAATAGGAGAGATAATCGGTaGGTCTGGGAGCAGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLKRDSMKPLEACLCNLNRRDNR*VWEQDE Trigger: CTCGTCCTGCTCCCAGACCAACCGATTATCTCTCCT...ATTTAAGTTGCACAGGCATGCCTCCAAAGGCTTCATGGAATCTCTCTTTAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
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| CDS-3UTR CAA 90 bp | GTTGAGAAGGAATCACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTCACACTTTCGTCTGCTaGTGCCGCCACCATGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VEKESLHEIKVHKMIFLLHTFVC*CRHHVP Trigger: GGGGACATGGTGGCGGCACAAGCAGACGAAAGTGTG...AAGAAGGAAGATCATCTTGTGTACTTTGATCTCATGAAGTGATTCCTTCTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | CAAAATACACACACAAAAGCAAATGGTGATGGTAGGTATCCGAGAGCAAGAAGACTCCAAGGCCTGCAGTaGGCTGCTGTTGAATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QNTHTKANGDGRYPRARRLQGLQ*AAVECC Trigger: ACAACATTCAACAGCAGCCAACTGCAGGCCTTGGAG...TCTTCTTGCTCTCGGATACCTACCATCACCATTTGCTTTTGTGTGTGTATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | AAGCACTTGTGTTTCACAAATGTGGCATTTCTCATCTTTATCTGGGCCCAATTCCTCCAAGGCCTGCAGTaGGCTGCTGTTGAATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KHLCFTNVAFLIFIWAQFLQGLQ*AAVECC Trigger: ACAACATTCAACAGCAGCCAACTGCAGGCCTTGGAG...GAATTGGGCCCAGATAAAGATGAGAAATGCCACATTTGTGAAACACAAGTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174397.3 |
||
| CDS-3UTR CAA 90 bp | GTTGAGAAGGAATCACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTACGAGGTACGATGGGTaGCTCCACAGCAGTCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: VEKESLHEIKVHKMIFLLTRYDG*LHSSHV Trigger: GACGTGACTGCTGTGGAGCAACCCATCGTACCTCGT...AAGAAGGAAGATCATCTTGTGTACTTTGATCTCATGAAGTGATTCCTTCTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | GCATGGCAACGTGGTTTGGTCAAGTTCACCAGGAAAATTGCCAAAGCAAAGCTGTGTAAACTATATTCCTaGGCCTTCAGTCTCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AWQRGLVKFTRKIAKAKLCKLYS*AFSLRL Trigger: CAACCTGAGACTGAAGGCCAAGGAATATAGTTTACA...CAGCTTTGCTTTGGCAATTTTCCTGGTGAACTTGACCAAACCACGTTGCCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027878.14 |
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| CDS-3UTR CAA 90 bp | CTTGTACGAAGCATCAGACACAACATCCCACTTCCTCCTTTGAGTTTATGGGATCGTGTAAACAACATCTaGGGAGGGACGAAGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVRSIRHNIPLPPLSLWDRVNNI*GGTKIC Trigger: ACAGATCTTCGTCCCTCCCAAGATGTTGTTTACACG...ATCCCATAAACTCAAAGGAGGAAGTGGGATGTTGTGTCTGATGCTTCGTACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | GTTGAGAAGGAATCACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTCCCTGTGCAGGGCTATaGTTGGCACATGTGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VEKESLHEIKVHKMIFLLPCAGL*LAHVAE Trigger: TTCTGCCACATGTGCCAACAATAGCCCTGCACAGGG...AAGAAGGAAGATCATCTTGTGTACTTTGATCTCATGAAGTGATTCCTTCTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027878.14 |
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| CDS-3UTR CAA 90 bp | GAAGAACAAGTATGTGCTAAAAGTGAATCTTATACGCCAAATACTTTGACTGACAGGAGAGATAATCGGTaGGTCTGGGAGCAGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: EEQVCAKSESYTPNTLTDRRDNR*VWEQDE Trigger: CTCGTCCTGCTCCCAGACCAACCGATTATCTCTCCT...GTCAGTCAAAGTATTTGGCGTATAAGATTCACTTTTAGCACATACTTGTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | GTTGAGAAGGAATCACTTCATGAGATCAAAGTACACAAGATGATCTTCCTTCTTTGCAGTTGGCTGCTGTaGAATGTTGTCCTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VEKESLHEIKVHKMIFLLCSWLL*NVVLFL Trigger: GAGAAACAGGACAACATTCAACAGCAGCCAACTGCA...AAGAAGGAAGATCATCTTGTGTACTTTGATCTCATGAAGTGATTCCTTCTCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS-3UTR CAA 90 bp | CCGAGAAGTGATCTTTCTCATATATATATTTCTTTGGCTGCTGGAGATTTCTTTTGCAGTTGGCTGCTGTaGAATGTTGTCCTGTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PRSDLSHIYISLAAGDFFCSWLL*NVVLFL Trigger: GAGAAACAGGACAACATTCAACAGCAGCCAACTGCA...AAAGAAATCTCCAGCAGCCAAAGAAATATATATATGAGAAAGATCACTTCTCGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 |
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| CDS TCA 72 bp | CTGCTGAGGGGTGTCGCTGCCACTGGTCAGTCCCGGTaGCTCCAGCAGGCTCCGGCCCGCCTCGCCCACACT | + |
|
Preference number: 6 (lower is better) Translates to: LLRGVAATGQSR*LQQAPARLAHT Trigger: AGTGTGGGCGAGGCGGGCCGGAGCCTGCTGGAGTCACCGGGACTGACCAGTGGCAGCGACACCCCTCAGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
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| CDS GCA 72 bp | CAGCAGGCTCCGGCCCGCCTCGCCCACACTTTCGTCTaGTTGTGCCGCCACCATGTCCCCGGCCTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QQAPARLAHTFV*LCRHHVPGLLQ Trigger: CTGGAGGAGGCCGGGGACATGGTGGCGGCACAAGCAGACGAAAGTGTGGGCGAGGCGGGCCGGAGCCTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
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| CDS CAA 72 bp | CAGGCTCCGGCCCGCCTCGCCCACACTTTCGTCTGCTaGTGCCGCCACCATGTCCCCGGCCTCCTCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QAPARLAHTFVC*CRHHVPGLLQV Trigger: GACCTGGAGGAGGCCGGGGACATGGTGGCGGCACAAGCAGACGAAAGTGTGGGCGAGGCGGGCCGGAGCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
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| CDS GCA 72 bp | CGGAGAAGTTCTTTTTCGCCTGCAGGGTGTCGAGGTTaGCCGGGCTGTCCAAGCGGCCGCCCAGCGCCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RRSSFSPAGCRG*PGCPSGRPAPV Trigger: AACCGGCGCTGGGCGGCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTTCTCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
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| CDS CCA 72 bp | ACTGGTCATTGTCCTGCTGAGGGGTGTCGCTGCCACTaGTCAGTCCCGGTGACTCCAGCAGGCTCCGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TGHCPAEGCRCH*SVPVTPAGSGP Trigger: CGGGCCGGAGCCTGCTGGAGTCACCGGGACTGACCAGTGGCAGCGACACCCCTCAGCAGGACAATGACCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
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| CDS CAA 72 bp | ACGGAGAAGTTCTTTTTCGCCTGCAGGGTGTCGAGGTaGCCCGGGCTGTCCAAGCGGCCGCCCAGCGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TEKFFFACRVSR*PGLSKRPPSAG Trigger: ACCGGCGCTGGGCGGCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTTCTCCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
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| CDS GCA 72 bp | AGTTCAACTGGTCATTGTCCTGCTGAGGGGTGTCGCTaGCACTGGTCAGTCCCGGTGACTCCAGCAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSTGHCPAEGCR*HWSVPVTPAGS Trigger: GGAGCCTGCTGGAGTCACCGGGACTGACCAGTGGCAGCGACACCCCTCAGCAGGACAATGACCAGTTGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
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| CDS CCA 72 bp | GAGAGGCTGTCCCCCAGGAGAGATAATCGGTTGGTCTaGGAGCAGGACGAGGTACGATGGGTTGCTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ERLSPRRDNRLV*EQDEVRWVAPQ Trigger: CTGTGGAGCAACCCATCGTACCTCGTCCTGCTCCCAGACCAACCGATTATCTCTCCTGGGGGACAGCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
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| CDS CAA 90 bp | ACGAAGATCTGTACGGAGAGGCTGTCCCCCAGGAGAGATAATCGGTaGGTCTGGGAGCAGGACGAGGTACGATGGGTTGCTCCACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TKICTERLSPRRDNR*VWEQDEVRWVAPQQ Trigger: CTGCTGTGGAGCAACCCATCGTACCTCGTCCTGCTCCCAGACCAACCGATTATCTCTCCTGGGGGACAGCCTCTCCGTACAGATCTTCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
||
| CDS CAA 72 bp | TGTACGGAGAGGCTGTCCCCCAGGAGAGATAATCGGTaGGTCTGGGAGCAGGACGAGGTACGATGGGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CTERLSPRRDNR*VWEQDEVRWVA Trigger: AGCAACCCATCGTACCTCGTCCTGCTCCCAGACCAACCGATTATCTCTCCTGGGGGACAGCCTCTCCGTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
||
| CDS CCA 72 bp | GATAATCGGTTGGTCTGGGAGCAGGACGAGGTACGATaGGTTGCTCCACAGCAGTCACGTCTCCTGAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: DNRLVWEQDEVR*VAPQQSRLLSR Trigger: CCTACTCAGGAGACGTGACTGCTGTGGAGCAACCCATCGTACCTCGTCCTGCTCCCAGACCAACCGATTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
||
| CDS GCA 72 bp | CACCTGCACTCTGGCCTCAGTGAGGTTCACCCGACGTaGGAGATCTTCTCGAACAAAAGCATCCGGGTAATG | + |
|
Preference number: 6 (lower is better) Translates to: HLHSGLSEVHPT*EIFSNKSIRVM Trigger: CATTACCCGGATGCTTTTGTTCGAGAAGATCTCGCACGTCGGGTGAACCTCACTGAGGCCAGAGTGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
||
| CDS TCA 72 bp | GTTGCTCCACAGCAGTCACGTCTCCTGAGTAGGACTTaGGGAGAGAAGCGTTTTTATTGGCCAGCATGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VAPQQSRLLSRT*GEKRFYWPAWL Trigger: GAGCCATGCTGGCCAATAAAAACGCTTCTCTCCTCAAGTCCTACTCAGGAGACGTGACTGCTGTGGAGCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
||
| CDS TCA 72 bp | AGGTACGATGGGTTGCTCCACAGCAGTCACGTCTCCTaGGTAGGACTTGAGGAGAGAAGCGTTTTTATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RYDGLLHSSHVS*VGLEERSVFIG Trigger: GCCAATAAAAACGCTTCTCTCCTCAAGTCCTACTCAGGAGACGTGACTGCTGTGGAGCAACCCATCGTACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027878.14 ENSMUST00000075805.13 ENSMUST00000174397.3 |
||
| CDS CAA 72 bp | AGAATCCGTTATGAAGCCCCTCGTGTAAACAACATCTaGGGAGGGACGAAGATCTGTACGGAGAGGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RIRYEAPRVNNI*GGTKICTERLS Trigger: GGACAGCCTCTCCGTACAGATCTTCGTCCCTCCCAAGATGTTGTTTACACGAGGGGCTTCATAACGGATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075805.13 |
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