Pregenerated sensors for PRRT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079654Ensembl transcript IDs: ENSMUST00000159200.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGCTAGGGGCATTAGCACCCCATGGCTCCAGAGAACTTGGCACTaGTTCCCAATGCATAGAGCCTGGTTGCTGACCCACCCACCCAGG | + |
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Preference number: 1 (lower is better) Translates to: AARGISTPWLQRTWH*FPMHRAWLLTHPPR Trigger: CCTGGGTGGGTGGGTCAGCAACCAGGCTCTATGCATTGGGAATCAGTGCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCCCCTAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR TCA 90 bp | TCCAGAGAACTTGGCACTGATTCCCAATGCATAGAGCCTGGTTGCTaGCCCACCCACCCAGGGGCCCCTGGATGGGAAAGAATCAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: SRELGTDSQCIEPGC*PTHPGAPGWERIRV Trigger: AACTCTGATTCTTTCCCATCCAGGGGCCCCTGGGTGGGTGGGTCAGCAACCAGGCTCTATGCATTGGGAATCAGTGCCAAGTTCTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR CCA 90 bp | CCAATGCATAGAGCCTGGTTGCTGACCCACCCACCCAGGGGCCCCTaGATGGGAAAGAATCAGAGTTATCTGAACCAGGCAGAATTGGAG | + |
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Preference number: 1 (lower is better) Translates to: PMHRAWLLTHPPRGP*MGKNQSYLNQAELE Trigger: CTCCAATTCTGCCTGGTTCAGATAACTCTGATTCTTTCCCATCCAGGGGCCCCTGGGTGGGTGGGTCAGCAACCAGGCTCTATGCATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR TCA 90 bp | GGACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGTaGCAGCCAAGGAAAGTAGAACCCTGCCACCCTAAAGTTGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: GHGGQEWSTLELYCW*QPRKVEPCHPKVAA Trigger: AGCTGCAACTTTAGGGTGGCAGGGTTCTACTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR CCA 90 bp | GACTCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTaGGCCACAGCTCCATCGTTAGGGAACAGTTCCATGAAGAGATGG | + |
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Preference number: 1 (lower is better) Translates to: DSENAHFPISCDKVC*ATAPSLGNSSMKRW Trigger: CCATCTCTTCATGGAACTGTTCCCTAACGATGGAGCTGTGGCCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR TCA 90 bp | CACCAGGGTAAGGGACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCACAGTGAGGAGGTCTTaGGCAGATCAGATGCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: HQGKGHGGQEWSTLELYCTVRRS*ADQMPE Trigger: TTCTGGCATCTGATCTGCTCAAGACCTCCTCACTGT...GCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTCCCTTACCCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGTAGAACCCTGCCACCCGGAGAATTGTTACAGTaGGGAGGTCTTGAGCAGATC | + |
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Preference number: 2 (lower is better) Translates to: HLGALLLVTAKESRTLPPGELLQ*GGLEQI Trigger: GATCTGCTCAAGACCTCCTCACTGTAACAATTCTCC...GGGTGGCAGGGTTCTACTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGAGGCATTAGCACCCCATaGCTCCAGAGAACTTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GHYKPFEDSCFTQHQGKGGISTP*LQRTWH Trigger: GTGCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCC...TCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACCAGGGGCCCCTGGATaGGAAAGAATCAGAGTTATC | + |
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Preference number: 2 (lower is better) Translates to: GHYKPFEDSCFTQHQGKGPGAPG*ERIRVI Trigger: GATAACTCTGATTCTTTCCCATCCAGGGGCCCCTGG...TCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGAATCAGAGTTATCTaGACCAGGCAGAATTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: WWSGVEHLGALLLVTAKERIRVI*TRQNWR Trigger: TCTCCAATTCTGCCTGGTTCAGATAACTCTGATTCT...TTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTGGTCAGGAGTaGAGCACCTTGGAGCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: GHYKPFEDSCFTQHQGKGHGGQE*STLELY Trigger: ATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATG...TCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTGAGGAGTGGAGCACCTTaGAGCTTTATTGCTGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: ISLLKIAVSLSTRVRDMVRSGAP*SFIAGD Trigger: GTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCT...CACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTGACTCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGCTTGAGCAGATCAGATaGCAGAAAGTGGAGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TLTLKTLISQSVAIKSVGLEQIR*QKVERG Trigger: CCCCCTCTCCACTTTCTGGCATCTGATCTGCTCAAG...CCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGAGTCAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR TCA 90 bp | ACATTGACTCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGCAGAGAACTTGGCACTaGTTCCCAATGCATAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: TLTLKTLISQSVAIKSVGQRTWH*FPMHRA Trigger: GGCTCTATGCATTGGGAATCAGTGCCAAGTTCTCTG...CCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGAGTCAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR CCA 72 bp | AGAGCCTGGTTGCTGACCCACCCACCCAGGGGCCCCTaGATGGGAAAGAATCAGAGTTATCTGAACCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RAWLLTHPPRGP*MGKNQSYLNQA Trigger: TGCCTGGTTCAGATAACTCTGATTCTTTCCCATCCAGGGGCCCCTGGGTGGGTGGGTCAGCAACCAGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGATGCATAGAGCCTGGTaGCTGACCCACCCACCCAGG | + |
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Preference number: 3 (lower is better) Translates to: VVRSGAPWSFIAGDSQGKMHRAW*LTHPPR Trigger: CCTGGGTGGGTGGGTCAGCAACCAGGCTCTATGCAT...CTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR TCA 72 bp | GGCATTAGCACCCCATGGCTCCAGAGAACTTGGCACTaGTTCCCAATGCATAGAGCCTGGTTGCTGACCCAC | + |
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Preference number: 3 (lower is better) Translates to: GISTPWLQRTWH*FPMHRAWLLTH Trigger: GTGGGTCAGCAACCAGGCTCTATGCATTGGGAATCAGTGCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR CAA 90 bp | CCTAAAGTTGCAGCTAGGGGCATTAGCACCCCATGGCTCCAGAGAACTTGGCACTACAGTGAGGAGGTCTaGAGCAGATCAGATGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: PKVAARGISTPWLQRTWHYSEEV*SRSDAR Trigger: TCTGGCATCTGATCTGCTCAAGACCTCCTCACTGTA...GTGCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCCCCTAGCTGCAACTTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR CAA 90 bp | TATGAAGCCCAGACAGGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCCTGCCACCCTAAAGTaGCAGCTAGGGGCATTAGCA | + |
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Preference number: 3 (lower is better) Translates to: YEAQTGHYKPFEDSCFTQPATLK*QLGALA Trigger: TGCTAATGCCCCTAGCTGCAACTTTAGGGTGGCAGG...CTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCCTGTCTGGGCTTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR-3UTR CAA 90 bp | TATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTCTGAACCAGGCAGAATaGGAGAATTGTTACAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: YKPFEDSCFTQHQGKGHGLNQAE*ENCYSE Trigger: CTCACTGTAACAATTCTCCAATTCTGCCTGGTTCAG...ACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| 3UTR GCA 72 bp | TACATTGACTCTGAAAACGCTCATTTCCCAATCAGTTaGGATAAAGTCTGTTGGGCCACAGCTCCATCGTTA | + |
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Preference number: 3 (lower is better) Translates to: YIDSENAHFPIS*DKVCWATAPSL Trigger: TAACGATGGAGCTGTGGCCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGAGTCAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | CAGGGTAAGGGACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGCAGGCAGGGGGCGCCTaGCGGACAGCGCCAGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: QGKGHGGQEWSTLELYCWQAGGA*RTAPGQ Trigger: TTGCCCTGGCGCTGTCCGCCAGGCGCCCCCTGCCTG...CCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTCCCTTACCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | GACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGTGACAGCCAAGAGCAGTGGGCCGCTTaGTGGGCCCTGAGAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: DMVVRSGAPWSFIAGDSQEQWAA*WALRGG Trigger: CCCGCCTCTCAGGGCCCACCAAGCGGCCCACTGCTC...TTGGCTGTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR GCA 90 bp | CTAAAGTTGCAGCTAGGGGCATTAGCACCCCATGGCTCCAGAGAACTTGGCACTGCGAGCCCTAGCCTCTaGCCAGTCGGCCTCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LKLQLGALAPHGSRELGTASPSL*PVGLQG Trigger: ACCCTGGAGGCCGACTGGGCAGAGGCTAGGGCTCGC...AGTGCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCCCCTAGCTGCAACTTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR TCA 90 bp | CACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGTAGAACCCTGCCACCCCCGCTTGGTGGGCCCTaGGAGGCGGGATGTGGATTC | + |
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Preference number: 4 (lower is better) Translates to: HLGALLLVTAKESRTLPPPLGGP*EAGCGF Trigger: GAATCCACATCCCGCCTCTCAGGGCCCACCAAGCGG...GGGTGGCAGGGTTCTACTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR TCA 90 bp | GTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGAGGGGAGGAGGCTGTTaGCTGCGTTGGGTTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: VVRSGAPWSFIAGDSQGKRGGGC*LRWVGP Trigger: GGGGCCAACCCAACGCAGTCAACAGCCTCCTCCCCT...CTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | CACCAGGGTAAGGGACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCGAGGCCTGGGAGCACTaGTTGGAGGTGCTGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: HQGKGHGGQEWSTLELYCEAWEH*LEVLSL Trigger: CAGCGACAGCACCTCCAACCAGTGCTCCCAGGCCTC...GCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTCCCTTACCCTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR GCA 90 bp | GGGCCCCTGGATGGGAAAGAATCAGAGTTATCTGAACCAGGCAGAATTGGAGAAGCGCCCAGCAATCTCTaGCAGGCTGGCCCGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GPLDGKESELSEPGRIGEAPSNL*QAGPQA Trigger: AGCCTGCGGGCCAGCCTGGCAGAGATTGCTGGGCGC...TTCTCCAATTCTGCCTGGTTCAGATAACTCTGATTCTTTCCCATCCAGGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR GCA 90 bp | CACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGTAGAACCCTGCCACCCGCCCCAACAAGAGAGTaGCAGCAGGAGCCCCGACAG | + |
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Preference number: 4 (lower is better) Translates to: HLGALLLVTAKESRTLPPAPTRE*QQEPRQ Trigger: CTGTCGGGGCTCCTGCTGGCACTCTCTTGTTGGGGC...GGGTGGCAGGGTTCTACTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | CAGGGTAAGGGACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGCCTGGGAGCACTGGTTaGAGGTGCTGTCGCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: QGKGHGGQEWSTLELYCWPGSTG*RCCRCQ Trigger: CTGACAGCGACAGCACCTCCAACCAGTGCTCCCAGG...CCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTCCCTTACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | CCTAAAGTTGCAGCTAGGGGCATTAGCACCCCATGGCTCCAGAGAACTTGGCACCCTGCTCCATATACATaGGCCTCCCAGGCCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: PKVAARGISTPWLQRTWHPAPYT*ASQARP Trigger: GGGTCTGGCCTGGGAGGCCCATGTATATGGAGCAGG...GTGCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCCCCTAGCTGCAACTTTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR TCA 90 bp | CCTAAAGTTGCAGCTAGGGGCATTAGCACCCCATGGCTCCAGAGAACTTGGCACGAGGATGGGTCTCGGTaGCAGGATTTCCCCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: PKVAARGISTPWLQRTWHEDGSR*QDFPRQ Trigger: CTGTCTGGGGAAATCCTGTCACCGAGACCCATCCTC...GTGCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCCCCTAGCTGCAACTTTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR TCA 90 bp | CTAAAGTTGCAGCTAGGGGCATTAGCACCCCATGGCTCCAGAGAACTTGGCACTGCACTGGTGTTGTCTTaGCTGAGGCAGAGCTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LKLQLGALAPHGSRELGTALVLS*LRQSSG Trigger: CCCCGAGCTCTGCCTCAGTCAAGACAACACCAGTGC...AGTGCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCCCCTAGCTGCAACTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR TCA 90 bp | GGGCCCCTGGATGGGAAAGAATCAGAGTTATCTGAACCAGGCAGAATTGGAGAACCGCAGGTTGATAGGTaGGGGCGGGCGGAAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: GPLDGKESELSEPGRIGEPQVDR*GRAEVH Trigger: GTGGACTTCCGCCCGCCCTCACCTATCAACCTGCGG...TTCTCCAATTCTGCCTGGTTCAGATAACTCTGATTCTTTCCCATCCAGGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR GCA 90 bp | GGGCCCCTGGATGGGAAAGAATCAGAGTTATCTGAACCAGGCAGAATTGGAGAAGCGGCACACGTGGGCTaGAGAGCGCTGGGTAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: GPLDGKESELSEPGRIGEAAHVG*RALGRD Trigger: GTCTCTACCCAGCGCTCTGCAGCCCACGTGTGCCGC...TTCTCCAATTCTGCCTGGTTCAGATAACTCTGATTCTTTCCCATCCAGGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | GGGCCCCTGGATGGGAAAGAATCAGAGTTATCTGAACCAGGCAGAATTGGAGAACCTTTCCAGGAGGGGTaGAGGACGCGACCCCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GPLDGKESELSEPGRIGEPFQEG*RTRPRG Trigger: ACCACGGGGTCGCGTCCTCCACCCCTCCTGGAAAGG...TTCTCCAATTCTGCCTGGTTCAGATAACTCTGATTCTTTCCCATCCAGGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | TATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTGCGGGAAGGCCCGAGTaGTCCCCGCGGAGAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: YKPFEDSCFTQHQGKGHGAGRPE*SPRRAA Trigger: TGCTGCTCTCCGCGGGGACCACTCGGGCCTTCCCGC...ACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | CAGGGTAAGGGACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGAAGCTCAGGAGGTGCTaGGGATCCAGGGACATTCTC | + |
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Preference number: 4 (lower is better) Translates to: QGKGHGGQEWSTLELYCWKLRRC*GSRDIL Trigger: GAGAATGTCCCTGGATCCCCAGCACCTCCTGAGCTT...CCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTCCCTTACCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR GCA 90 bp | CACCAGGGTAAGGGACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCGGTCTATGGTGTCGCTaGCCATGCTCAGCTCATCAA | + |
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Preference number: 4 (lower is better) Translates to: HQGKGHGGQEWSTLELYCGLWCR*PCSAHQ Trigger: TTGATGAGCTGAGCATGGGCAGCGACACCATAGACC...GCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTCCCTTACCCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | GGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGAGGGGCCTGTCGGGGCTaGAACACAGAAGCATGGACG | + |
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Preference number: 4 (lower is better) Translates to: GHYKPFEDSCFTQHQGKGGACRG*NTEAWT Trigger: CGTCCATGCTTCTGTGTTCCAGCCCCGACAGGCCCC...TCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR GCA 90 bp | CCTAAAGTTGCAGCTAGGGGCATTAGCACCCCATGGCTCCAGAGAACTTGGCACTTGGATGTGCTGTTGTaGCTGGGTAACTCTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PKVAARGISTPWLQRTWHLDVLL*LGNSAL Trigger: CAAGGCAGAGTTACCCAGGCACAACAGCACATCCAA...GTGCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCCCCTAGCTGCAACTTTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR GCA 90 bp | ACATTGACTCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGGCAGCGAGAAAGGCGTaGAGACCGCGGGAGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: TLTLKTLISQSVAIKSVGAARKA*RPREAS Trigger: GCTCGCCTCCCGCGGTCTGCACGCCTTTCTCGCTGC...CCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGAGTCAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | GTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGGCAGGTCCCCGGAGATaGAATTTGAAGTTTAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: VVRSGAPWSFIAGDSQGKAGPRR*NLKFSP Trigger: GGGGCTAAACTTCAAATTCCATCTCCGGGGACCTGC...CTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | ACATTGACTCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGCAGTGGGCCGCTTGGTaGGCCCTGAGAGGCGGGATG | + |
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Preference number: 4 (lower is better) Translates to: TLTLKTLISQSVAIKSVGQWAAW*ALRGGM Trigger: CATCCCGCCTCTCAGGGCCCACCAAGCGGCCCACTG...CCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGAGTCAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | TCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGCCACAGCTGTTGAGAGTGAGCAGTaGGCCGCTTGGTGGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SENAHFPISCDKVCWATAVESEQ*AAWWAL Trigger: CAGGGCCCACCAAGCGGCCCACTGCTCACTCTCAAC...AGCTGTGGCCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | AGAGATGGCAGAGGTGGGTATGAAGCCCAGACAGGGCACTATAAGCCTTTTGAACACTCTGATGAGGCCTaGGAGCACTGGTTGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RDGRGGYEAQTGHYKPFEHSDEA*EHWLEV Trigger: CACCTCCAACCAGTGCTCCCAGGCCTCATCAGAGTG...TTCAAAAGGCTTATAGTGCCCTGTCTGGGCTTCATACCCACCTCTGCCATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CCA 90 bp | GTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGCATCTGGGCCAGAAGTaGAGACAGTGGGGTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVRSGAPWSFIAGDSQGKHLGQK*RQWGLV Trigger: AACAAGACCCCACTGTCTCCACTTCTGGCCCAGATG...CTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGAAGACGCAGACCTAGCTaGAAAGCCCACCAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHYKPFEDSCFTQHQGKGRRRPS*KAHQGQ Trigger: CTGGCCCTGGTGGGCTTTCCAGCTAGGTCTGCGTCT...TCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGCCACAGCTCGGCAGCCGCCACCTTaGAGAAGGAGATCGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SENAHFPISCDKVCWATARQPPP*RRRSGP Trigger: AGGTCCCGATCTCCTTCTCCAAGGTGGCGGCTGCCG...AGCTGTGGCCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGTGGAACACAGAAGCATaGACGAGCTGTCCCGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVRSGAPWSFIAGDSQGKWNTEA*TSCPVR Trigger: TCTCACGGGACAGCTCGTCCATGCTTCTGTGTTCCA...CTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR TCA 90 bp | AGAGATGGCAGAGGTGGGTATGAAGCCCAGACAGGGCACTATAAGCCTTTTGAAATAGAGGCCTCACTCTaGGGTGGTGGGGTCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RDGRGGYEAQTGHYKPFEIEASL*GGGVRV Trigger: TACTCTGACCCCACCACCTCAGAGTGAGGCCTCTAT...TTCAAAAGGCTTATAGTGCCCTGTCTGGGCTTCATACCCACCTCTGCCATCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR TCA 90 bp | GGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGATGGTGTTGTCTTGACTaGGGCAGAGCTCGGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHYKPFEDSCFTQHQGKGWCCLD*GRARGS Trigger: GCTTCCCCGAGCTCTGCCTCAGTCAAGACAACACCA...TCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTGACCAGGAGCCAGAAGTaGCTCGCTGCAGAGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLLKIAVSLSTRVRDMVTRSQK*LAAEGF Trigger: GAAGCCCTCTGCAGCGAGGCACTTCTGGCTCCTGGT...CACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGCAAGCATCCAGGAATTaGTCTTGCAGCAATGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVRSGAPWSFIAGDSQGKQASRN*SCSNAS Trigger: GGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTG...CTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | TATGAAGCCCAGACAGGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGTGGGCTGCAGAGCGCTaGGTAGAGACCAAGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: YEAQTGHYKPFEDSCFTQWAAER*VETKQR Trigger: GCGCTGCTTGGTCTCTACCCAGCGCTCTGCAGCCCA...CTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCCTGTCTGGGCTTCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR GCA 90 bp | TATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTGGCAGCGGAAGGTCCTaGAGCAGTAGCCAGACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YKPFEDSCFTQHQGKGHGGSGRS*SSSQTR Trigger: TCTCGTCTGGCTACTGCTGCAGGACCTTCCGCTGCC...ACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTGGGGAAGCTCAGGAGGTaGTGGGGATCCAGGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: ISLLKIAVSLSTRVRDMVGKLRR*WGSRDI Trigger: AATGTCCCTGGATCCCCAGCACCTCCTGAGCTTCCC...CACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR GCA 90 bp | CACCTTGGAGCTTTATTGCTGGTGACAGCCAAGGAAAGTAGAACCCTGCCACCCAATGCCTCCTCAGCCTaGAGTTCAGAAGCATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLGALLLVTAKESRTLPPNASSA*SSEACS Trigger: AGAACATGCTTCTGAACTGCAGGCTGAGGAGGCATT...GGGTGGCAGGGTTCTACTTTCCTTGGCTGTCACCAGCAATAAAGCTCCAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR GCA 90 bp | AGAGATGGCAGAGGTGGGTATGAAGCCCAGACAGGGCACTATAAGCCTTTTGAATGGTGTCGCTGCCCATaGTCAGCTCATCAATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDGRGGYEAQTGHYKPFEWCRCP*SAHQSV Trigger: GACAGATTGATGAGCTGAGCATGGGCAGCGACACCA...TTCAAAAGGCTTATAGTGCCCTGTCTGGGCTTCATACCCACCTCTGCCATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTGAGAGGAAGCAGGCTGTaGACCCACAGGTACGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLLKIAVSLSTRVRDMVRGSRL*THRYGK Trigger: CTTGCCGTACCTGTGGGTCCACAGCCTGCTTCCTCT...CACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGCCACAGCTTTCAGAAGCATGTTCTaGGGAGTCGCGGGAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SENAHFPISCDKVCWATAFRSMF*GVAGGW Trigger: CCACCCTCCCGCGACTCCCCAGAACATGCTTCTGAA...AGCTGTGGCCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR TCA 90 bp | TCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGCCACAGCTTGGGTAACTCTGCCTTaGGAAGTTCCGGAGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SENAHFPISCDKVCWATAWVTLP*EVPEWG Trigger: TCCCCACTCCGGAACTTCTCAAGGCAGAGTTACCCA...AGCTGTGGCCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | GACTCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGCCACAAGTAAGAGGGGCACCTaGTACAGAGGAAGCAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSENAHFPISCDKVCWATSKRGT*YRGSRL Trigger: CAGCCTGCTTCCTCTGTACCAGGTGCCCCTCTTACT...TGTGGCCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACCAGGAGAGAGAGGATaGGTCTCGGTGACAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: GHYKPFEDSCFTQHQGKGPGERG*VSVTGF Trigger: AAATCCTGTCACCGAGACCCATCCTCTCTCTCCTGG...TCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGATCTTCCTCAGACTCCTaGCCTAGTCCAGGAGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHYKPFEDSCFTQHQGKGSSSDS*PSPGER Trigger: TCTCTCTCCTGGACTAGGCCAGGAGTCTGAGGAAGA...TCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | CACCAGGGTAAGGGACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTTCAAAAGCAAAACTTaGATGTGCTGTTGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQGKGHGGQEWSTLELYCFKSKT*MCCCAW Trigger: CCAGGCACAACAGCACATCCAAGTTTTGCTTTTGAA...GCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTCCCTTACCCTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGCCACAGCTCTTCTCACTGGGTCCTaGCCCTATCTTGTTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SENAHFPISCDKVCWATALLTGS*PYLVPQ Trigger: TTGGGGAACAAGATAGGGGCAGGACCCAGTGAGAAG...AGCTGTGGCCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | TATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTGGCCTCACTCTGAGGTaGTGGGGTCAGAGTAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YKPFEDSCFTQHQGKGHGGLTLR*WGQSSK Trigger: CTTACTACTCTGACCCCACCACCTCAGAGTGAGGCC...ACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGAAGGAGAGAGTTCATCTaGGCCAGAAGTGGAGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GHYKPFEDSCFTQHQGKGRREFI*ARSGDS Trigger: ACTGTCTCCACTTCTGGCCCAGATGAACTCTCTCCT...TCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGAAAGGATTCCCGAAGCTaGCAGGAGAGAGTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GHYKPFEDSCFTQHQGKGKDSRS*QERVHL Trigger: CAGATGAACTCTCTCCTGCCAGCTTCGGGAATCCTT...TCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | ACATTGACTCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGACCGATGACCAAGAGTaGGGGCTGCACCTGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLTLKTLISQSVAIKSVGTDDQE*GLHLLL Trigger: TAAGAGCAGGTGCAGCCCCCACTCTTGGTCATCGGT...CCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGAGTCAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR GCA 90 bp | ACATTGACTCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGTCCAGGAATTGCTCTTaGAGCAATGCCTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLTLKTLISQSVAIKSVGSRNCS*SNASSA Trigger: GGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGA...CCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGAGTCAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTGGAGCCCAGGAGAATCTaGCACTTCAAAAGCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ISLLKIAVSLSTRVRDMVEPRRI*HFKSKT Trigger: AGTTTTGCTTTTGAAGTGTCAGATTCTCCTGGGCTC...CACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CCA 90 bp | ACATTGACTCTGAAAACGCTCATTTCCCAATCAGTTGCGATAAAGTCTGTTGGGGGAGTGGGGACACAGTaGTACCAAAGAACCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLTLKTLISQSVAIKSVGGVGTQ*YQRTQK Trigger: CTTTTGGGTTCTTTGGTACCACTGTGTCCCCACTCC...CCCAACAGACTTTATCGCAACTGATTGGGAAATGAGCGTTTTCAGAGTCAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| 3UTR CAA 72 bp | ATGGGAAAGAATCAGAGTTATCTGAACCAGGCAGAATaGGAGAATTGTTACAGTGAGGAGGTCTTGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MGKNQSYLNQAE*ENCYSEEVLSR Trigger: TCTGCTCAAGACCTCCTCACTGTAACAATTCTCCAATTCTGCCTGGTTCAGATAACTCTGATTCTTTCCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS GCA 90 bp | GCAGGGCTCCGCTCAGCAGCCCAAAGGTCCCGGCCACCGGGGCTGTaGGCGCCGCTCGCCTCCAGGACTCCCGCGGGGCGAAGGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGLRSAAQRSRPPGL*APLASRTPAGRRDC Trigger: GCAGTCCCTTCGCCCCGCGGGAGTCCTGGAGGCGAGCGGCGCGCACAGCCCCGGTGGCCGGGACCTTTGGGCTGCTGAGCGGAGCCCTGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS CCA 90 bp | GCTAACGGGAGCGCGACGCCCACCTCGCCCAGACGCAGACCTAGCTaGAAAGCCCACCAGGGCCAGGGCCCCTCCAAGCCTGCTTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ANGSATPTSPRRRPS*KAHQGQGPSKPAWL Trigger: AAGCCAAGCAGGCTTGGAGGGGCCCTGGCCCTGGTGGGCTTTCCAGCTAGGTCTGCGTCTGGGCGAGGTGGGCGTCGCGCTCCCGTTAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS GCA 90 bp | CAAGCCAGCCCCAGACCTGCAGCTAGGCAGGGCAGCGGAAGGTCCTaGAGCAGTAGCCAGACGAGAGTCGGCAGCCGATCGCGATGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QASPRPAARQGSGRS*SSSQTRVGSRSRCP Trigger: CGGGCATCGCGATCGGCTGCCGACTCTCGTCTGGCTACTGCTGCAGGACCTTCCGCTGCCCTGCCTAGCTGCAGGTCTGGGGCTGGCTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS GCA 90 bp | CCTTGGAGAAGGAGATCGGGACCTGGGCCTGCTAGAGCGCATAGCTaGAGCAGCTCTGCGTCCCCACGCGCGATCGCGCTACCCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PWRRRSGPGPARAHS*SSSASPRAIALPRG Trigger: GCCCCTGGGTAGCGCGATCGCGCGTGGGGACGCAGAGCTGCTGCAGCTATGCGCTCTAGCAGGCCCAGGTCCCGATCTCCTTCTCCAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS GCA 90 bp | GCTGCTGCCGGGAGGCCAGGCCCCGGGAGAGGGAAGCTCAGGAGGTaGTGGGGATCCAGGGACATTCTCGGACTTCTCACTGGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAAGRPGPGRGKLRR*WGSRDILGLLTGSC Trigger: GCAGGACCCAGTGAGAAGTCCGAGAATGTCCCTGGATCCCCAGCACCTCCTGAGCTTCCCTCTCCCGGGGCCTGGCCTCCCGGCAGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS GCA 90 bp | AGCTGTCCCGTGAGAGTCCACACAGAGAGCCAGATGAGGCGCTGCTaGCGGGAGGCCAGGCCCCGGGAGAGGGAAGCTCAGGAGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCPVRVHTESQMRRC*REARPREREAQEVL Trigger: CAGCACCTCCTGAGCTTCCCTCTCCCGGGGCCTGGCCTCCCGGCAGCAGCGCCTCATCTGGCTCTCTGTGTGGACTCTCACGGGACAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS GCA 90 bp | ACGAGCTGTCCCGTGAGAGTCCACACAGAGAGCCAGATGAGGCGCTaGTGCCGGGAGGCCAGGCCCCGGGAGAGGGAAGCTCAGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TSCPVRVHTESQMRR*CREARPREREAQEV Trigger: CACCTCCTGAGCTTCCCTCTCCCGGGGCCTGGCCTCCCGGCAGCAGCGCCTCATCTGGCTCTCTGTGTGGACTCTCACGGGACAGCTCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS CCA 90 bp | GATCGCGATGCCCGTAGGCGTCGTAGAAGAGCGGGAAGGCCCGAGTaGTCCCCGCGGAGAGCAGCAGCAGATCCAGCAACGCCAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DRDARRRRRRAGRPE*SPRRAAADPATPGR Trigger: CCTGCCTGGCGTTGCTGGATCTGCTGCTGCTCTCCGCGGGGACCACTCGGGCCTTCCCGCTCTTCTACGACGCCTACGGGCATCGCGATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS CCA 90 bp | GTTGGGTTGGCCCCGGCACCTTCAAAGCCCCGGCAGCCGCCACCTTaGAGAAGGAGATCGGGACCTGGGCCTGCTAGAGCGCATAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGLAPAPSKPRQPPP*RRRSGPGPARAHSC Trigger: GCAGCTATGCGCTCTAGCAGGCCCAGGTCCCGATCTCCTTCTCCAAGGTGGCGGCTGCCGGGGCTTTGAAGGTGCCGGGGCCAACCCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS GCA 90 bp | ATATACATGGGCCTCCCAGGCCAGACCCCAGCGAGCCCTAGCCTCTaGCCAGTCGGCCTCCAGGGTCAAGAAGAAGAGAGGCAGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IYMGLPGQTPASPSL*PVGLQGQEEERQRG Trigger: TCCCCGCTGCCTCTCTTCTTCTTGACCCTGGAGGCCGACTGGGCAGAGGCTAGGGCTCGCTGGGGTCTGGCCTGGGAGGCCCATGTATAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS GCA 90 bp | CAGCTCAAGCTCACTCTGATGAGGCCTGGGAGCACTGGTTGGAGGTaGTGTCGCTGTCAGAGCAGTGGCCCAGGTCACGGTGCCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: QLKLTLMRPGSTGWR*CRCQSSGPGHGAHP Trigger: AGGATGGGCACCGTGACCTGGGCCACTGCTCTGACAGCGACAGCACCTCCAACCAGTGCTCCCAGGCCTCATCAGAGTGAGCTTGAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS CCA 90 bp | CTAAGGGACAGCGAGGGGGCCTGTCGGGGCTGGAACACAGAAGCATaGACGAGCTGTCCCGTGAGAGTCCACACAGAGAGCCAGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRDSEGACRGWNTEA*TSCPVRVHTESQMR Trigger: CCTCATCTGGCTCTCTGTGTGGACTCTCACGGGACAGCTCGTCCATGCTTCTGTGTTCCAGCCCCGACAGGCCCCCTCGCTGTCCCTTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CAA 90 bp | ACCCTAAAGTTGCAGCTAGGGGCATTAGCACCCCATGGCTCCAGAGAACTTGGCCCGGCAGCCGCCACCTaGGAGAAGGAGATCGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TLKLQLGALAPHGSRELGPAAAT*EKEIGT Trigger: GGTCCCGATCTCCTTCTCCAAGGTGGCGGCTGCCGG...GCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCCCCTAGCTGCAACTTTAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS CCA 90 bp | AAACTTCAGCTCAAGCTCACTCTGATGAGGCCTGGGAGCACTGGTTaGAGGTGCTGTCGCTGTCAGAGCAGTGGCCCAGGTCACGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KLQLKLTLMRPGSTG*RCCRCQSSGPGHGA Trigger: GGCACCGTGACCTGGGCCACTGCTCTGACAGCGACAGCACCTCCAACCAGTGCTCCCAGGCCTCATCAGAGTGAGCTTGAGCTGAAGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CAA 90 bp | CACCAGGGTAAGGGACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCGAAGGGACTGCGCACTaGCGGGACAGGGGTAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HQGKGHGGQEWSTLELYCEGTAH*RDRGST Trigger: GGTGCTACCCCTGTCCCGCAAGTGCGCAGTCCCTTC...GCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTCCCTTACCCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS CCA 90 bp | CATCAAACTTCAGCTCAAGCTCACTCTGATGAGGCCTGGGAGCACTaGTTGGAGGTGCTGTCGCTGTCAGAGCAGTGGCCCAGGTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: HQTSAQAHSDEAWEH*LEVLSLSEQWPRSR Trigger: CCGTGACCTGGGCCACTGCTCTGACAGCGACAGCACCTCCAACCAGTGCTCCCAGGCCTCATCAGAGTGAGCTTGAGCTGAAGTTTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS GCA 90 bp | CGACAAGCATCCAGGAATTGCTCTTGCAGCAATGCCTCCTCAGCCTaGAGTTCAGAAGCATGTTCTGGGGAGTCGCGGGAGGGTGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RQASRNCSCSNASSA*SSEACSGESREGGD Trigger: ATCCCCACCCTCCCGCGACTCCCCAGAACATGCTTCTGAACTGCAGGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CAA 90 bp | AGAGATGGCAGAGGTGGGTATGAAGCCCAGACAGGGCACTATAAGCCTTTTGAACCCCTCCAAGCCTGCTaGGCTTCCGTAGCCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RDGRGGYEAQTGHYKPFEPLQAC*ASVAQG Trigger: GCCCTGGGCTACGGAAGCCAAGCAGGCTTGGAGGGG...TTCAAAAGGCTTATAGTGCCCTGTCTGGGCTTCATACCCACCTCTGCCATCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 90 bp | GGAGAGAGTTCATCTGGGCCAGAAGTGGAGACAGTGGGGTCTTGTTaGACTGGTGTTGTCTTGACTGAGGCAGAGCTCGGGGAAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: GESSSGPEVETVGSC*TGVVLTEAELGEAT Trigger: AGTGGCTTCCCCGAGCTCTGCCTCAGTCAAGACAACACCAGTGCAACAAGACCCCACTGTCTCCACTTCTGGCCCAGATGAACTCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 90 bp | AGGGGATCAGTCCTCAGATCGCCTTCCTCCTCTTCCTCAGACTCCTaGCCTAGTCCAGGAGAGAGAGGATGGGTCTCGGTGACAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: RGSVLRSPSSSSSDS*PSPGERGWVSVTGF Trigger: AAATCCTGTCACCGAGACCCATCCTCTCTCTCCTGGACTAGGCCAGGAGTCTGAGGAAGAGGAGGAAGGCGATCTGAGGACTGATCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CAA 90 bp | ACCCTAAAGTTGCAGCTAGGGGCATTAGCACCCCATGGCTCCAGAGAACTTGGCTGCACTGGTGTTGTCTaGACTGAGGCAGAGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLKLQLGALAPHGSRELGCTGVV*TEAELG Trigger: CCCGAGCTCTGCCTCAGTCAAGACAACACCAGTGCA...GCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCCCCTAGCTGCAACTTTAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS TCA 90 bp | CAACTCTGGCTCACTACAAGAGCCTGGCTCACATCCAGGCTGTGTTaGAGGATTCCCGAAGCTGGCAGGAGAGAGTTCATCTGGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QLWLTTRAWLTSRLC*RIPEAGRREFIWAR Trigger: TCTGGCCCAGATGAACTCTCTCCTGCCAGCTTCGGGAATCCTTCAACACAGCCTGGATGTGAGCCAGGCTCTTGTAGTGAGCCAGAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CAA 90 bp | CACCAGGGTAAGGGACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCAAGTTTAGCCCCAGGTaGAGAGAGAGCATAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HQGKGHGGQEWSTLELYCKFSPR*RESIEA Trigger: GGCCTCTATGCTCTCTCTCAACCTGGGGCTAAACTT...GCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTCCCTTACCCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CAA 90 bp | TATGAAGCCCAGACAGGGCACTATAAGCCTTTTGAAGATAGCTGTTTCACTCAGATGCTGCGCCGCAGGTaGATAGGTGAGGGCGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: YEAQTGHYKPFEDSCFTQMLRRR*IGEGGR Trigger: CCGCCCGCCCTCACCTATCAACCTGCGGCGCAGCAT...CTGAGTGAAACAGCTATCTTCAAAAGGCTTATAGTGCCCTGTCTGGGCTTCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 90 bp | CTCATCAATCTGTCGACAAGCATCCAGGAATTGCTCTTGCAGCAATaGCTCCTCAGCCTGCAGTTCAGAAGCATGTTCTGGGGAGTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LINLSTSIQELLLQQ*LLSLQFRSMFWGVA Trigger: CGCGACTCCCCAGAACATGCTTCTGAACTGCAGGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGTCGACAGATTGATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CAA 90 bp | GACATGGTGGTCAGGAGTGGAGCACCTTGGAGCTTTATTGCTGGTGACAGCCAAATCCAGGAATTGCTCTaGCAGCAATGCCTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DMVVRSGAPWSFIAGDSQIQELL*QQCLLS Trigger: GCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGAT...TTGGCTGTCACCAGCAATAAAGCTCCAAGGTGCTCCACTCCTGACCACCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 90 bp | CTGCCCATGCTCAGCTCATCAATCTGTCGACAAGCATCCAGGAATTaGTCTTGCAGCAATGCCTCCTCAGCCTGCAGTTCAGAAGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LPMLSSSICRQASRN*SCSNASSACSSEAC Trigger: ACATGCTTCTGAACTGCAGGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGTCGACAGATTGATGAGCTGAGCATGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CAA 90 bp | TATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTGCCTGGGAGCACTGGTaGGAGGTGCTGTCGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YKPFEDSCFTQHQGKGHGAWEHW*EVLSLS Trigger: TGACAGCGACAGCACCTCCAACCAGTGCTCCCAGGC...ACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CAA 90 bp | AGAGATGGCAGAGGTGGGTATGAAGCCCAGACAGGGCACTATAAGCCTTTTGAACCAACAGGCTTGGGCTaGAGAACTTCCTTTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RDGRGGYEAQTGHYKPFEPTGLG*RTSFPG Trigger: TCCTGGAAAGGAAGTTCTCAAGCCCAAGCCTGTTGG...TTCAAAAGGCTTATAGTGCCCTGTCTGGGCTTCATACCCACCTCTGCCATCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CAA 90 bp | TATAAGCCTTTTGAAGATAGCTGTTTCACTCAGCACCAGGGTAAGGGACATGGTCTGGGTAACTCTGCCTaGAGAAGTTCCGGAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YKPFEDSCFTQHQGKGHGLGNSA*RSSGVG Trigger: CCCCACTCCGGAACTTCTCAAGGCAGAGTTACCCAG...ACCATGTCCCTTACCCTGGTGCTGAGTGAAACAGCTATCTTCAAAAGGCTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CAA 90 bp | CTAAAGTTGCAGCTAGGGGCATTAGCACCCCATGGCTCCAGAGAACTTGGCACTCTTCAAAAGCAAAACTaGGATGTGCTGTTGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKLQLGALAPHGSRELGTLQKQN*DVLLCL Trigger: CAGGCACAACAGCACATCCAAGTTTTGCTTTTGAAG...AGTGCCAAGTTCTCTGGAGCCATGGGGTGCTAATGCCCCTAGCTGCAACTTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS-3UTR CAA 90 bp | GGGCCCCTGGATGGGAAAGAATCAGAGTTATCTGAACCAGGCAGAATTGGAGAAACAAGCATCCAGGAATaGCTCTTGCAGCAATGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPLDGKESELSEPGRIGETSIQE*LLQQCL Trigger: GAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGT...TTCTCCAATTCTGCCTGGTTCAGATAACTCTGATTCTTTCCCATCCAGGGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS-3UTR CAA 90 bp | GAATTGGAGAATTGTTACAGTGAGGAGGTCTTGAGCAGATCAGATGCCAGAAAGCTGAATCCAACAGGCTaGGGCTTGAGAACTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ELENCYSEEVLSRSDARKLNPTG*GLRTSF Trigger: AAAGGAAGTTCTCAAGCCCAAGCCTGTTGGATTCAG...CTTTCTGGCATCTGATCTGCTCAAGACCTCCTCACTGTAACAATTCTCCAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 72 bp | CGCTCAGCAGCCCAAAGGTCCCGGCCACCGGGGCTGTaGGCGCCGCTCGCCTCCAGGACTCCCGCGGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RSAAQRSRPPGL*APLASRTPAGR Trigger: TCGCCCCGCGGGAGTCCTGGAGGCGAGCGGCGCGCACAGCCCCGGTGGCCGGGACCTTTGGGCTGCTGAGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 72 bp | AGCAGGAGCCCCGACAGGAAGGCAGCGAGAAAGGCGTaGAGACCGCGGGAGGCGAGCCGCAGCGGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRSPDRKAARKA*RPREASRSGRS Trigger: GCTGCGGCCGCTGCGGCTCGCCTCCCGCGGTCTGCACGCCTTTCTCGCTGCCTTCCTGTCGGGGCTCCTGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS CCA 72 bp | AGCGCGACGCCCACCTCGCCCAGACGCAGACCTAGCTaGAAAGCCCACCAGGGCCAGGGCCCCTCCAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SATPTSPRRRPS*KAHQGQGPSKP Trigger: AGGCTTGGAGGGGCCCTGGCCCTGGTGGGCTTTCCAGCTAGGTCTGCGTCTGGGCGAGGTGGGCGTCGCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | GCCCCGGCACCTTCAAAGCCCCGGCAGCCGCCACCTTaGAGAAGGAGATCGGGACCTGGGCCTGCTAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: APAPSKPRQPPP*RRRSGPGPARA Trigger: CGCTCTAGCAGGCCCAGGTCCCGATCTCCTTCTCCAAGGTGGCGGCTGCCGGGGCTTTGAAGGTGCCGGGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CAA 72 bp | CCTCCAGGACTCCCGCGGGGCGAAGGGACTGCGCACTaGCGGGACAGGGGTAGCACCCTTAAAGCCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPGLPRGEGTAH*RDRGSTLKASP Trigger: GGGGCTGGCTTTAAGGGTGCTACCCCTGTCCCGCAAGTGCGCAGTCCCTTCGCCCCGCGGGAGTCCTGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | GCCCGTAGGCGTCGTAGAAGAGCGGGAAGGCCCGAGTaGTCCCCGCGGAGAGCAGCAGCAGATCCAGCAACG | + |
|
Preference number: 6 (lower is better) Translates to: ARRRRRRAGRPE*SPRRAAADPAT Trigger: CGTTGCTGGATCTGCTGCTGCTCTCCGCGGGGACCACTCGGGCCTTCCCGCTCTTCTACGACGCCTACGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 72 bp | CCCAGACCTGCAGCTAGGCAGGGCAGCGGAAGGTCCTaGAGCAGTAGCCAGACGAGAGTCGGCAGCCGATCG | + |
|
Preference number: 6 (lower is better) Translates to: PRPAARQGSGRS*SSSQTRVGSRS Trigger: CGATCGGCTGCCGACTCTCGTCTGGCTACTGCTGCAGGACCTTCCGCTGCCCTGCCTAGCTGCAGGTCTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS TCA 72 bp | AGGTTGAGAGTGAGCAGTGGGCCGCTTGGTGGGCCCTaGGAGGCGGGATGTGGATTCGGGAGGCAGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RLRVSSGPLGGP*EAGCGFGRQGG Trigger: TCCTCCCTGCCTCCCGAATCCACATCCCGCCTCTCAGGGCCCACCAAGCGGCCCACTGCTCACTCTCAACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS TCA 72 bp | GAGGGCTTCCTCGATGCTGCGCCGCAGGTTGATAGGTaGGGGCGGGCGGAAGTCCACGGTGCAATCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EGFLDAAPQVDR*GRAEVHGAIAA Trigger: AGCAGCGATTGCACCGTGGACTTCCGCCCGCCCTCACCTATCAACCTGCGGCGCAGCATCGAGGAAGCCCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 72 bp | GGGAGGCCAGGCCCCGGGAGAGGGAAGCTCAGGAGGTaGTGGGGATCCAGGGACATTCTCGGACTTCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: GRPGPGRGKLRR*WGSRDILGLLT Trigger: AGTGAGAAGTCCGAGAATGTCCCTGGATCCCCAGCACCTCCTGAGCTTCCCTCTCCCGGGGCCTGGCCTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | GCCACCAAGCCGAAGAGAGCTCCTGCTCCATATACATaGGCCTCCCAGGCCAGACCCCAGCGAGCCCTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ATKPKRAPAPYT*ASQARPQRALA Trigger: GGCTAGGGCTCGCTGGGGTCTGGCCTGGGAGGCCCATGTATATGGAGCAGGAGCTCTCTTCGGCTTGGTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | AGGCCAGGCCCCGGGAGAGGGAAGCTCAGGAGGTGCTaGGGATCCAGGGACATTCTCGGACTTCTCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPGPGRGKLRRC*GSRDILGLLTG Trigger: CCCAGTGAGAAGTCCGAGAATGTCCCTGGATCCCCAGCACCTCCTGAGCTTCCCTCTCCCGGGGCCTGGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 72 bp | AAAGGCAGGGCCCTGAAAGAGACCAGGAGCCAGAAGTaGCTCGCTGCAGAGGGCTTCCTCGATGCTGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: KGRALKETRSQK*LAAEGFLDAAP Trigger: CGGCGCAGCATCGAGGAAGCCCTCTGCAGCGAGGCACTTCTGGCTCCTGGTCTCTTTCAGGGCCCTGCCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 72 bp | CTCACTCTGATGAGGCCTGGGAGCACTGGTTGGAGGTaGTGTCGCTGTCAGAGCAGTGGCCCAGGTCACGGT | + |
|
Preference number: 6 (lower is better) Translates to: LTLMRPGSTGWR*CRCQSSGPGHG Trigger: ACCGTGACCTGGGCCACTGCTCTGACAGCGACAGCACCTCCAACCAGTGCTCCCAGGCCTCATCAGAGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | CACTGGGTCCTGCCCCTATCTTGTTCCCCAATGAGATaGTGCGGTAGAGACCGAGCCCAGGCAGGGCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: HWVLPLSCSPMR*CGRDRAQAGLP Trigger: GGGAAGCCCTGCCTGGGCTCGGTCTCTACCGCACCATCTCATTGGGGAACAAGATAGGGGCAGGACCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | CACAGACTAAGGGACAGCGAGGGGGCCTGTCGGGGCTaGAACACAGAAGCATGGACGAGCTGTCCCGTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: HRLRDSEGACRG*NTEAWTSCPVR Trigger: TCTCACGGGACAGCTCGTCCATGCTTCTGTGTTCCAGCCCCGACAGGCCCCCTCGCTGTCCCTTAGTCTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS TCA 72 bp | CTTCTCACTGGGTCCTGCCCCTATCTTGTTCCCCAATaGGATGGTGCGGTAGAGACCGAGCCCAGGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLTGSCPYLVPQ*DGAVETEPRQG Trigger: GCCCTGCCTGGGCTCGGTCTCTACCGCACCATCTCATTGGGGAACAAGATAGGGGCAGGACCCAGTGAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | CTCAAGCTCACTCTGATGAGGCCTGGGAGCACTGGTTaGAGGTGCTGTCGCTGTCAGAGCAGTGGCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LKLTLMRPGSTG*RCCRCQSSGPG Trigger: ACCTGGGCCACTGCTCTGACAGCGACAGCACCTCCAACCAGTGCTCCCAGGCCTCATCAGAGTGAGCTTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | TCAGCTCAAGCTCACTCTGATGAGGCCTGGGAGCACTaGTTGGAGGTGCTGTCGCTGTCAGAGCAGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SAQAHSDEAWEH*LEVLSLSEQWP Trigger: GGGCCACTGCTCTGACAGCGACAGCACCTCCAACCAGTGCTCCCAGGCCTCATCAGAGTGAGCTTGAGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | GGAGGCAGGCGGCTGTCCCAAGTCATCCAGCAACTCTaGCTCACTACAAGAGCCTGGCTCACATCCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGRRLSQVIQQL*LTTRAWLTSRL Trigger: CAGCCTGGATGTGAGCCAGGCTCTTGTAGTGAGCCAGAGTTGCTGGATGACTTGGGACAGCCGCCTGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | CTGAGGTGGTGGGGTCAGAGTAGTAAGAGGGGCACCTaGTACAGAGGAAGCAGGCTGTGGACCCACAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LRWWGQSSKRGT*YRGSRLWTHRY Trigger: GTACCTGTGGGTCCACAGCCTGCTTCCTCTGTACCAGGTGCCCCTCTTACTACTCTGACCCCACCACCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CAA 72 bp | AGCTCGGGGAAGCCACTGAATCCAACAGGCTTGGGCTaGAGAACTTCCTTTCCAGGAGGGGTGGAGGACGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSGKPLNPTGLG*RTSFPGGVEDA Trigger: CGCGTCCTCCACCCCTCCTGGAAAGGAAGTTCTCAAGCCCAAGCCTGTTGGATTCAGTGGCTTCCCCGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | ACTTCCTTTCCAGGAGGGGTGGAGGACGCGACCCCGTaGTGCCAAAGAGCCCAGGAGAATCTGACACTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: TSFPGGVEDATP*CQRAQENLTLQ Trigger: TTGAAGTGTCAGATTCTCCTGGGCTCTTTGGCACCACGGGGTCGCGTCCTCCACCCCTCCTGGAAAGGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CAA 72 bp | AGGCAGAGCTCGGGGAAGCCACTGAATCCAACAGGCTaGGGCTTGAGAACTTCCTTTCCAGGAGGGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RQSSGKPLNPTG*GLRTSFPGGVE Trigger: CTCCACCCCTCCTGGAAAGGAAGTTCTCAAGCCCAAGCCTGTTGGATTCAGTGGCTTCCCCGAGCTCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CAA 90 bp | GCAACTCTGGCTCACTACAAGAGCCTGGCTCACATCCAGGCTGTGTaGAAGGATTCCCGAAGCTGGCAGGAGAGAGTTCATCTGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ATLAHYKSLAHIQAV*KDSRSWQERVHLGQ Trigger: CTGGCCCAGATGAACTCTCTCCTGCCAGCTTCGGGAATCCTTCAACACAGCCTGGATGTGAGCCAGGCTCTTGTAGTGAGCCAGAGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 72 bp | TCATCTGGGCCAGAAGTGGAGACAGTGGGGTCTTGTTaGACTGGTGTTGTCTTGACTGAGGCAGAGCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGPEVETVGSC*TGVVLTEAELG Trigger: CCCGAGCTCTGCCTCAGTCAAGACAACACCAGTGCAACAAGACCCCACTGTCTCCACTTCTGGCCCAGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CCA 72 bp | AACTCTGCCTTGAGAAGTTCCGGAGTGGGGACACAGTaGTACCAAAGAACCCAAAAGGTCCCAGGCGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NSALRSSGVGTQ*YQRTQKVPGAQ Trigger: CTGGGCGCCTGGGACCTTTTGGGTTCTTTGGTACCACTGTGTCCCCACTCCGGAACTTCTCAAGGCAGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CAA 72 bp | GTGGAGACAGTGGGGTCTTGTTGCACTGGTGTTGTCTaGACTGAGGCAGAGCTCGGGGAAGCCACTGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: VETVGSCCTGVV*TEAELGEATES Trigger: GGATTCAGTGGCTTCCCCGAGCTCTGCCTCAGTCAAGACAACACCAGTGCAACAAGACCCCACTGTCTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS TCA 72 bp | TGGAGACAGTGGGGTCTTGTTGCACTGGTGTTGTCTTaGCTGAGGCAGAGCTCGGGGAAGCCACTGAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: WRQWGLVALVLS*LRQSSGKPLNP Trigger: TGGATTCAGTGGCTTCCCCGAGCTCTGCCTCAGTCAAGACAACACCAGTGCAACAAGACCCCACTGTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS CAA 90 bp | GCTGCCCATGCTCAGCTCATCAATCTGTCGACAAGCATCCAGGAATaGCTCTTGCAGCAATGCCTCCTCAGCCTGCAGTTCAGAAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: AAHAQLINLSTSIQE*LLQQCLLSLQFRSM Trigger: CATGCTTCTGAACTGCAGGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGTCGACAGATTGATGAGCTGAGCATGGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 72 bp | CTGTCGACAAGCATCCAGGAATTGCTCTTGCAGCAATaGCTCCTCAGCCTGCAGTTCAGAAGCATGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSTSIQELLLQQ*LLSLQFRSMFW Trigger: CCAGAACATGCTTCTGAACTGCAGGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGTCGACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS CAA 72 bp | GCTCAGCTCATCAATCTGTCGACAAGCATCCAGGAATaGCTCTTGCAGCAATGCCTCCTCAGCCTGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AQLINLSTSIQE*LLQQCLLSLQF Trigger: GAACTGCAGGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGTCGACAGATTGATGAGCTGAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS CAA 90 bp | CATGCTCAGCTCATCAATCTGTCGACAAGCATCCAGGAATTGCTCTaGCAGCAATGCCTCCTCAGCCTGCAGTTCAGAAGCATGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HAQLINLSTSIQELL*QQCLLSLQFRSMFW Trigger: CCAGAACATGCTTCTGAACTGCAGGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGTCGACAGATTGATGAGCTGAGCATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
||
| CDS GCA 72 bp | CTCAGCTCATCAATCTGTCGACAAGCATCCAGGAATTaGTCTTGCAGCAATGCCTCCTCAGCCTGCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LSSSICRQASRN*SCSNASSACSS Trigger: TGAACTGCAGGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGTCGACAGATTGATGAGCTGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CAA 72 bp | CTCATCAATCTGTCGACAAGCATCCAGGAATTGCTCTaGCAGCAATGCCTCCTCAGCCTGCAGTTCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: LINLSTSIQELL*QQCLLSLQFRS Trigger: GCTTCTGAACTGCAGGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGTCGACAGATTGATGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 72 bp | TCATCAATCTGTCGACAAGCATCCAGGAATTGCTCTTaGAGCAATGCCTCCTCAGCCTGCAGTTCAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSICRQASRNCS*SNASSACSSEA Trigger: TGCTTCTGAACTGCAGGCTGAGGAGGCATTGCTGCAAGAGCAATTCCTGGATGCTTGTCGACAGATTGATGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CAA 90 bp | TGGTGCCAAAGAGCCCAGGAGAATCTGACACTTCAAAAGCAAAACTaGGATGTGCTGTTGTGCCTGGGTAACTCTGCCTTGAGAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: WCQRAQENLTLQKQN*DVLLCLGNSALRSS Trigger: GGAACTTCTCAAGGCAGAGTTACCCAGGCACAACAGCACATCCAAGTTTTGCTTTTGAAGTGTCAGATTCTCCTGGGCTCTTTGGCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS GCA 72 bp | CTGACACTTCAAAAGCAAAACTTGGATGTGCTGTTGTaGCTGGGTAACTCTGCCTTGAGAAGTTCCGGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LTLQKQNLDVLL*LGNSALRSSGV Trigger: CACTCCGGAACTTCTCAAGGCAGAGTTACCCAGGCACAACAGCACATCCAAGTTTTGCTTTTGAAGTGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CAA 72 bp | AGAGCCCAGGAGAATCTGACACTTCAAAAGCAAAACTaGGATGTGCTGTTGTGCCTGGGTAACTCTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: RAQENLTLQKQN*DVLLCLGNSAL Trigger: CAAGGCAGAGTTACCCAGGCACAACAGCACATCCAAGTTTTGCTTTTGAAGTGTCAGATTCTCCTGGGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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| CDS CAA 72 bp | AATCTGACACTTCAAAAGCAAAACTTGGATGTGCTGTaGTGCCTGGGTAACTCTGCCTTGAGAAGTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: NLTLQKQNLDVL*CLGNSALRSSG Trigger: TCCGGAACTTCTCAAGGCAGAGTTACCCAGGCACAACAGCACATCCAAGTTTTGCTTTTGAAGTGTCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159200.2 |
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