Pregenerated sensors for PRRG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007837Ensembl transcript IDs: ENSMUST00000007981.9, ENSMUST00000209219.2, ENSMUST00000209920.2, ENSMUST00000210101.2, ENSMUST00000210493.2, ENSMUST00000210500.2, ENSMUST00000210690.2, ENSMUST00000211014.2, ENSMUST00000211337.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTaGCGACTTCCGGAATCCGCTATGAATCAGGGGCACAGTTCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: PDSPTDTLKPSRRRS*RLPESAMNQGHSSG Trigger: CCCTGAACTGTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| 3UTR-3UTR TCA 90 bp | GACCTCGGGTCCGACGACCCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTCAAGCAGGTCTTCAGTaGGGCCTTCTGAGGCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: DLGSDDPDSPTDTLKPSRQAGLQ*GLLRLE Trigger: CTCCAGCCTCAGAAGGCCTCACTGAAGACCTGCTTG...ACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGGGTCGTCGGACCCGAGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209920.2 |
||
| 3UTR-3UTR TCA 90 bp | GACGACCCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGTTCCGGAATCCGCTATaGATCAGGGGCACAGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: DDPDSPTDTLKPSRRRSWFRNPL*IRGTVQ Trigger: CTGAACTGTGCCCCTGATTCATAGCGGATTCCGGAA...CCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGGGTCGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| 3UTR-3UTR TCA 90 bp | ACGTGTGTCATGGTAGACCTCGGGTCCGACGACCCTGACTCCCCCACGGACACATTCCGGAATCCGCTATaGATCAGGGGCACAGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TCVMVDLGSDDPDSPTDTFRNPL*IRGTVQ Trigger: CTGAACTGTGCCCCTGATTCATAGCGGATTCCGGAA...TGTGTCCGTGGGGGAGTCAGGGTCGTCGGACCCGAGGTCTACCATGACACACGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| 3UTR TCA 72 bp | CACGTGTGTCATGGTAGACCTCGGGTCCGACGACCCTaGCTCCCCCACGGACACACTGAAGCCCAGTCGTCG | + |
|
Preference number: 3 (lower is better) Translates to: HVCHGRPRVRRP*LPHGHTEAQSS Trigger: CGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGGGTCGTCGGACCCGAGGTCTACCATGACACACGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| 3UTR TCA 72 bp | GTCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATaGATCAGGGGCACAGTTCAGGGAGCCCGCGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VVEEAGDFRNPL*IRGTVQGARAA Trigger: TGCAGCGCGGGCTCCCTGAACTGTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| 3UTR GCA 72 bp | CAACTCGGCAACAGGATGGTCAGGGACGTGCGTGTATaGGTGCCCGGCGGAAACACGTGTGTCATGGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QLGNRMVRDVRV*VPGGNTCVMVD Trigger: GTCTACCATGACACACGTGTTTCCGCCGGGCACGCATACACGCACGTCCCTGACCATCCTGTTGCCGAGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| 3UTR CCA 72 bp | CCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTaGCGACTTCCGGAATCCGCTATGAATCAGGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PTDTLKPSRRRS*RLPESAMNQGH Trigger: GTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| 3UTR GCA 72 bp | GCAGAGGGCAGCTCAGATCAACTCCATTTACCCGGGTaGAACACAAGCGTGACACCCCGCTTACAGCACATT | + |
|
Preference number: 3 (lower is better) Translates to: AEGSSDQLHLPG*NTSVTPRLQHI Trigger: AATGTGCTGTAAGCGGGGTGTCACGCTTGTGTTGCACCCGGGTAAATGGAGTTGATCTGAGCTGCCCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000007981.9 ENSMUST00000210690.2 |
||
| CDS-3UTR TCA 90 bp | GACCTCGGGTCCGACGACCCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTTTGCTCTCTGTGAGGTaGGGTGTCCAGGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLGSDDPDSPTDTLKPSRLLSVR*GVQAGG Trigger: GCCACCTGCCTGGACACCTCACCTCACAGAGAGCAA...ACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGGGTCGTCGGACCCGAGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR GCA 90 bp | GACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTCCGTCCCACCGCCAGGCCTaGAACATCCACCCGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: DSPTDTLKPSRRRSWRLPSHRQA*NIHPST Trigger: CGTGGACGGGTGGATGTTGCAGGCCTGGCGGTGGGA...CGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS-3UTR GCA 90 bp | ACGTGTGTCATGGTAGACCTCGGGTCCGACGACCCTGACTCCCCCACGGACACATCCCACCGCCAGGCCTaGAACATCCACCCGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TCVMVDLGSDDPDSPTDTSHRQA*NIHPST Trigger: CGTGGACGGGTGGATGTTGCAGGCCTGGCGGTGGGA...TGTGTCCGTGGGGGAGTCAGGGTCGTCGGACCCGAGGTCTACCATGACACACGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS-3UTR GCA 90 bp | GAATCCGCTATGAATCAGGGGCACAGTTCAGGGAGCCCGCGCTGCAAGCAGGTCTCCCACCGCCAGGCCTaGAACATCCACCCGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ESAMNQGHSSGSPRCKQVSHRQA*NIHPST Trigger: CGTGGACGGGTGGATGTTGCAGGCCTGGCGGTGGGA...GACCTGCTTGCAGCGCGGGCTCCCTGAACTGTGCCCCTGATTCATAGCGGATTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS-3UTR GCA 90 bp | CCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCTCCCACCGCCAGGCCTaGAACATCCACCCGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: PTDTLKPSRRRSWRLPESSHRQA*NIHPST Trigger: CGTGGACGGGTGGATGTTGCAGGCCTGGCGGTGGGA...GGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS-3UTR GCA 90 bp | CCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTGGCGGAGGTGCGTCGTaGACCCCGGAGGCTGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PDSPTDTLKPSRRRSWRLGGGAS*TPEAAK Trigger: TTTAGCAGCCTCCGGGGTGCACGACGCACCTCCGCC...AAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR CCA 90 bp | AACACGTGTGTCATGGTAGACCTCGGGTCCGACGACCCTGACTCCCCCACGGACGCCTGGGGGCAAGGGTaGAGATTGAGGCGTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NTCVMVDLGSDDPDSPTDAWGQG*RLRRLR Trigger: CCTCAGACGCCTCAATCTCCACCCTTGCCCCCAGGC...GTCCGTGGGGGAGTCAGGGTCGTCGGACCCGAGGTCTACCATGACACACGTGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR CCA 90 bp | GACCCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGAAAGCCTGCTCATAGGTaGGAAGGCCTGGGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPDSPTDTLKPSRRRSWRKPAHR*EGLGAR Trigger: CCTTGCCCCCAGGCCTTCCCACCTATGAGCAGGCTT...TCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR CCA 90 bp | GACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTCCGAAGCCTGCTCATAGGTaGGAAGGCCTGGGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSPTDTLKPSRRRSWRLPKPAHR*EGLGAR Trigger: CCTTGCCCCCAGGCCTTCCCACCTATGAGCAGGCTT...CGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR TCA 90 bp | CCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCTTGCTCTCTGTGAGGTaGGGTGTCCAGGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTDTLKPSRRRSWRLPESLLSVR*GVQAGG Trigger: GCCACCTGCCTGGACACCTCACCTCACAGAGAGCAA...GGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR TCA 90 bp | CCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTTTGCTCTCTGTGAGGTaGGGTGTCCAGGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PDSPTDTLKPSRRRSWRLLLSVR*GVQAGG Trigger: GCCACCTGCCTGGACACCTCACCTCACAGAGAGCAA...AAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR TCA 90 bp | GACCCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGAAGCCGGCCAAGACAATaGGGAGGATCCCAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DPDSPTDTLKPSRRRSWRSRPRQ*GGSQRS Trigger: TGACCTCTGGGATCCTCCTCATTGTCTTGGCCGGCT...TCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS-3UTR TCA 90 bp | TGGCGACTTCCGGAATCCGCTATGAATCAGGGGCACAGTTCAGGGAGCCCGCGCAGCCGGCCAAGACAATaGGGAGGATCCCAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WRLPESAMNQGHSSGSPRSRPRQ*GGSQRS Trigger: TGACCTCTGGGATCCTCCTCATTGTCTTGGCCGGCT...GCGCGGGCTCCCTGAACTGTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGGGCACAGTTCAGGGAGCCCTTGCTCTCTGTGAGGTaGGGTGTCCAGGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLATSGIRYESGAQFREPLLSVR*GVQAGG Trigger: GCCACCTGCCTGGACACCTCACCTCACAGAGAGCAA...GGGCTCCCTGAACTGTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR CCA 90 bp | GACGACCCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGGAAACTCTGGGCCTCTaGGGCATCCAGGAAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: DDPDSPTDTLKPSRRRSWETLGL*GIQEDV Trigger: GACATCTTCCTGGATGCCCCAGAGGCCCAGAGTTTC...CCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGGGTCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007981.9 ENSMUST00000210690.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGGGCAAAGCCTGCTCATAGGTaGGAAGGCCTGGGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQSSKKLATSGIRYESGAKPAHR*EGLGAR Trigger: CCTTGCCCCCAGGCCTTCCCACCTATGAGCAGGCTT...TGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAACCAACTAAGAAACTCTaGGCCTCTGGGGCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPTDTLKPSRRRSWRLPEPTKKL*ASGASR Trigger: CCTGGATGCCCCAGAGGCCCAGAGTTTCTTAGTTGG...TTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000007981.9 ENSMUST00000210690.2 |
||
| CDS-3UTR CCA 90 bp | CAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGGGCACAGAAGCCTGCTCATAGGTaGGAAGGCCTGGGGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSKKLATSGIRYESGAQKPAHR*EGLGAR Trigger: CCTTGCCCCCAGGCCTTCCCACCTATGAGCAGGCTT...CTGTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR TCA 90 bp | TCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGGGCACAGTTCTTGCTCTCTGTGAGGTaGGGTGTCCAGGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKKLATSGIRYESGAQFLLSVR*GVQAGG Trigger: GCCACCTGCCTGGACACCTCACCTCACAGAGAGCAA...GAACTGTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGGGCACCAACTAAGAAACTCTaGGCCTCTGGGGCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQSSKKLATSGIRYESGAPTKKL*ASGASR Trigger: CCTGGATGCCCCAGAGGCCCAGAGTTTCTTAGTTGG...TGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000007981.9 ENSMUST00000210690.2 |
||
| CDS-3UTR TCA 90 bp | TCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGGGCACAGTTCAGCCGGCCAAGACAATaGGGAGGATCCCAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSKKLATSGIRYESGAQFSRPRQ*GGSQRS Trigger: TGACCTCTGGGATCCTCCTCATTGTCTTGGCCGGCT...GAACTGTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGAAACTCTGGGCCTCTaGGGCATCCAGGAAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKPSRRRSWRLPESAMNQETLGL*GIQEDV Trigger: GACATCTTCCTGGATGCCCCAGAGGCCCAGAGTTTC...CTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000007981.9 ENSMUST00000210690.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCCAAAGGGTTTTTAAGCAGAGGGCAGCTCAGATCAACTCCATTTACCCGAGCCGGCCAAGACAATaGGGAGGATCCCAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSQRVFKQRAAQINSIYPSRPRQ*GGSQRS Trigger: TGACCTCTGGGATCCTCCTCATTGTCTTGGCCGGCT...CGGGTAAATGGAGTTGATCTGAGCTGCCCTCTGCTTAAAAACCCTTTGGGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007981.9 ENSMUST00000210690.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCGACTTCCGGAATCCGCTATGAATCAGGGGCACAGTTCAGGGAGCCCGCGGATGAGCCCGGTCTCTaGCAGACAGGACTCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LATSGIRYESGAQFREPADEPGL*QTGLLA Trigger: GGCCAGGAGTCCTGTCTGCAAGAGACCGGGCTCATC...CGCGGGCTCCCTGAACTGTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS-3UTR CAA 90 bp | CCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTGATGAGCCCGGTCTCTaGCAGACAGGACTCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PDSPTDTLKPSRRRSWRLDEPGL*QTGLLA Trigger: GGCCAGGAGTCCTGTCTGCAAGAGACCGGGCTCATC...AAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS-3UTR CAA 90 bp | AACACGTGTGTCATGGTAGACCTCGGGTCCGACGACCCTGACTCCCCCACGGACGGGCAAGGGTGGAGATaGAGGCGTCTGAGGACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: NTCVMVDLGSDDPDSPTDGQGWR*RRLRTQ Trigger: TTGAGTCCTCAGACGCCTCAATCTCCACCCTTGCCC...GTCCGTGGGGGAGTCAGGGTCGTCGGACCCGAGGTCTACCATGACACACGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAAGGGCAAGGGTGGAGATaGAGGCGTCTGAGGACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SPTDTLKPSRRRSWRLPEGQGWR*RRLRTQ Trigger: TTGAGTCCTCAGACGCCTCAATCTCCACCCTTGCCC...TTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR CAA 90 bp | GAATCCGCTATGAATCAGGGGCACAGTTCAGGGAGCCCGCGCTGCAAGCAGGTCGGGCAAGGGTGGAGATaGAGGCGTCTGAGGACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ESAMNQGHSSGSPRCKQVGQGWR*RRLRTQ Trigger: TTGAGTCCTCAGACGCCTCAATCTCCACCCTTGCCC...GACCTGCTTGCAGCGCGGGCTCCCTGAACTGTGCCCCTGATTCATAGCGGATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR CAA 90 bp | GACGACCCTGACTCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGTCCCAGAAGCGCTCCTaGGTTTTGCTCTCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DDPDSPTDTLKPSRRRSWSQKRS*VLLSVR Trigger: CCTCACAGAGAGCAAAACCAAGGAGCGCTTCTGGGA...CCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGAGTCAGGGTCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209920.2 ENSMUST00000211337.2 |
||
| CDS CCA 90 bp | CACTCCCGTTCCAGGTTCCCAGGGGTCAGCAACTCCAGGTCCCAGTaGTTAGCACGAGGAAAACGCCTGCGGCCAACTAAGAAACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSRSRFPGVSNSRSQ*LARGKRLRPTKKLW Trigger: CCAGAGTTTCTTAGTTGGCCGCAGGCGTTTTCCTCGTGCTAACCACTGGGACCTGGAGTTGCTGACCCCTGGGAACCTGGAACGGGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000007981.9 ENSMUST00000210101.2 ENSMUST00000210493.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211014.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGGGCACAGTTCAGGGAGCCCCGCTCCGTCAGTGTGTaGTCCTCAAAGTACTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: KLATSGIRYESGAQFREPRSVSV*SSKYSR Trigger: CCGGGAGTACTTTGAGGACAACACACTGACGGAGCG...GGGCTCCCTGAACTGTGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000007981.9 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGGGCAGGGCAAGGGTGGAGATaGAGGCGTCTGAGGACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: AQSSKKLATSGIRYESGAGQGWR*RRLRTQ Trigger: TTGAGTCCTCAGACGCCTCAATCTCCACCCTTGCCC...TGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCACGGACACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCCAGAAGCGCTCCTaGGTTTTGCTCTCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPTDTLKPSRRRSWRLPESQKRS*VLLSVR Trigger: CCTCACAGAGAGCAAAACCAAGGAGCGCTTCTGGGA...TTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGTGTCCGTGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209920.2 ENSMUST00000211337.2 |
||
| CDS CCA 90 bp | GCGCTCCTTGGTTTTGCTCTCTGTGAGGTGAGGTGTCCAGGCAGGTaGCCAATCCCATATAGACTAAGAGCAGGGAAGGACGGCCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLGFALCEVRCPGR*PIPYRLRAGKDGPS Trigger: TGAGGGGCCGTCCTTCCCTGCTCTTAGTCTATATGGGATTGGCCACCTGCCTGGACACCTCACCTCACAGAGAGCAAAACCAAGGAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209219.2 ENSMUST00000209920.2 ENSMUST00000211337.2 |
||
| CDS CCA 90 bp | GGGCCTCTTGGTTTTGCTCTCTGTGAGGTGAGGTGTCCAGGCAGGTaGCCAATCCCATATAGACTAAGAGCAGGGAAGGACGGCCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPLGFALCEVRCPGR*PIPYRLRAGKDGPS Trigger: TGAGGGGCCGTCCTTCCCTGCTCTTAGTCTATATGGGATTGGCCACCTGCCTGGACACCTCACCTCACAGAGAGCAAAACCAAGAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210500.2 |
||
| CDS-3UTR CAA 90 bp | AAGCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGGGGGGCAAGGGTGGAGATaGAGGCGTCTGAGGACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: KPSRRRSWRLPESAMNQGGQGWR*RRLRTQ Trigger: TTGAGTCCTCAGACGCCTCAATCTCCACCCTTGCCC...CCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTT 58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 5 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211337.2 |
||
| CDS TCA 90 bp | GTCGATAATGCAGATACCAAAAGGCTCCCAAGCCGGCCAAGACAATaGGGAGGATCCCAGAGGTCAGTCCCACCGCCAGGCCTGCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VDNADTKRLPSRPRQ*GGSQRSVPPPGLQH Trigger: ATGTTGCAGGCCTGGCGGTGGGACTGACCTCTGGGATCCTCCTCATTGTCTTGGCCGGCTTGGGAGCCTTTTGGTATCTGCATTATCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210101.2 ENSMUST00000210493.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211014.2 |
||
| CDS-3UTR CAA 90 bp | GCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATGAATCAGGGGCAGAAACTCTGGGCCTCTaGGTTTTGCTCTCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQSSKKLATSGIRYESGAETLGL*VLLSVR Trigger: CCTCACAGAGAGCAAAACCAAGAGGCCCAGAGTTTC...TGCCCCTGATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210500.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGAAGCCCAGTCGTCGAAGAAGCTGGCGACTTCCGGAATCCGCTATGAATCGCTCCGTCAGTGTGTaGTCCTCAAAGTACTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLKPSRRRSWRLPESAMNRSVSV*SSKYSR Trigger: CCGGGAGTACTTTGAGGACAACACACTGACGGAGCG...ATTCATAGCGGATTCCGGAAGTCGCCAGCTTCTTCGACGACTGGGCTTCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000007981.9 ENSMUST00000210500.2 ENSMUST00000210690.2 |
||
| CDS CCA 90 bp | CAAGAACTTGGTTTTGCTCTCTGTGAGGTGAGGTGTCCAGGCAGGTaGCCAATCCCATATAGACTAAGAGCAGGGAAGGACGGCCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QELGFALCEVRCPGR*PIPYRLRAGKDGPS Trigger: TGAGGGGCCGTCCTTCCCTGCTCTTAGTCTATATGGGATTGGCCACCTGCCTGGACACCTCACCTCACAGAGAGCAAAACCAAGTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000210101.2 ENSMUST00000210690.2 ENSMUST00000211014.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCCCAAAGGGTTTTTAAGCAGAGGGCAGCTCAGATCAACTCCATTTACCCGCGCTCCGTCAGTGTGTaGTCCTCAAAGTACTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSQRVFKQRAAQINSIYPRSVSV*SSKYSR Trigger: CCGGGAGTACTTTGAGGACAACACACTGACGGAGCG...CGGGTAAATGGAGTTGATCTGAGCTGCCCTCTGCTTAAAAACCCTTTGGGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000007981.9 ENSMUST00000210690.2 |
||
| CDS CAA 72 bp | CGTCTGAGGACTCAAGGGGATGATGAGCCCGGTCTCTaGCAGACAGGACTCCTGGCCTCTGAGGCGGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RLRTQGDDEPGL*QTGLLASEAAP Trigger: CGGCGCCGCCTCAGAGGCCAGGAGTCCTGTCTGCAAGAGACCGGGCTCATCATCCCCTTGAGTCCTCAGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210101.2 ENSMUST00000210493.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211014.2 |
||
| CDS TCA 72 bp | GCAGATACCAAAAGGCTCCCAAGCCGGCCAAGACAATaGGGAGGATCCCAGAGGTCAGTCCCACCGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ADTKRLPSRPRQ*GGSQRSVPPPG Trigger: GCCTGGCGGTGGGACTGACCTCTGGGATCCTCCTCATTGTCTTGGCCGGCTTGGGAGCCTTTTGGTATCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210101.2 ENSMUST00000210493.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211014.2 |
||
| CDS CAA 90 bp | AGATTGAGGCGTCTGAGGACTCAAGGGGATGATGAGCCCGGTCTCTaGCAGACAGGACTCCTGGCCTCTGAGGCGGCGCCGTCGATAATG | + |
|
Preference number: 6 (lower is better) Translates to: RLRRLRTQGDDEPGL*QTGLLASEAAPSIM Trigger: CATTATCGACGGCGCCGCCTCAGAGGCCAGGAGTCCTGTCTGCAAGAGACCGGGCTCATCATCCCCTTGAGTCCTCAGACGCCTCAATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000007981.9 ENSMUST00000209920.2 ENSMUST00000210101.2 ENSMUST00000210493.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211014.2 |
||
| CDS CCA 72 bp | TCCAGGTTCCCAGGGGTCAGCAACTCCAGGTCCCAGTaGTTAGCACGAGGAAAACGCCTGCGGCCAACTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRFPGVSNSRSQ*LARGKRLRPTK Trigger: CTTAGTTGGCCGCAGGCGTTTTCCTCGTGCTAACCACTGGGACCTGGAGTTGCTGACCCCTGGGAACCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000007981.9 ENSMUST00000210101.2 ENSMUST00000210493.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211014.2 |
||
| CDS CCA 72 bp | AGCCTGCTCATAGGTGGGAAGGCCTGGGGGCAAGGGTaGAGATTGAGGCGTCTGAGGACTCAAGGGGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLLIGGKAWGQG*RLRRLRTQGDD Trigger: ATCATCCCCTTGAGTCCTCAGACGCCTCAATCTCCACCCTTGCCCCCAGGCCTTCCCACCTATGAGCAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000007981.9 ENSMUST00000210493.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211014.2 ENSMUST00000211337.2 |
||
| CDS TCA 72 bp | GAAACTCTGGGCCTCTTGGTTTTGCTCTCTGTGAGGTaGGGTGTCCAGGCAGGTGGCCAATCCCATATAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ETLGLLVLLSVR*GVQAGGQSHID Trigger: GTCTATATGGGATTGGCCACCTGCCTGGACACCTCACCTCACAGAGAGCAAAACCAAGAGGCCCAGAGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210500.2 |
||
| CDS CCA 72 bp | GGTTTTGCTCTCTGTGAGGTGAGGTGTCCAGGCAGGTaGCCAATCCCATATAGACTAAGAGCAGGGAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GFALCEVRCPGR*PIPYRLRAGKD Trigger: GTCCTTCCCTGCTCTTAGTCTATATGGGATTGGCCACCTGCCTGGACACCTCACCTCACAGAGAGCAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000007981.9 ENSMUST00000209219.2 ENSMUST00000209920.2 ENSMUST00000210101.2 ENSMUST00000210500.2 ENSMUST00000210690.2 ENSMUST00000211014.2 ENSMUST00000211337.2 |
||
| CDS TCA 72 bp | ACTAAGAAACTCTGGGCCTCTTGGTTTTGCTCTCTGTaGGGTGAGGTGTCCAGGCAGGTGGCCAATCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: TKKLWASWFCSL*GEVSRQVANPI Trigger: TATGGGATTGGCCACCTGCCTGGACACCTCACCTCACAGAGAGCAAAACCAAGAGGCCCAGAGTTTCTTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210500.2 |
||
| CDS TCA 72 bp | TCCAGGAAGATGTCAAGAACTTGGTTTTGCTCTCTGTaGGGTGAGGTGTCCAGGCAGGTGGCCAATCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: SRKMSRTWFCSL*GEVSRQVANPI Trigger: TATGGGATTGGCCACCTGCCTGGACACCTCACCTCACAGAGAGCAAAACCAAGTTCTTGACATCTTCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000210101.2 ENSMUST00000210690.2 ENSMUST00000211014.2 |
||
| CDS TCA 72 bp | GAAGATGTCAAGAACTTGGTTTTGCTCTCTGTGAGGTaGGGTGTCCAGGCAGGTGGCCAATCCCATATAGAC | + |
|
Preference number: 6 (lower is better) Translates to: EDVKNLVLLSVR*GVQAGGQSHID Trigger: GTCTATATGGGATTGGCCACCTGCCTGGACACCTCACCTCACAGAGAGCAAAACCAAGTTCTTGACATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000007981.9 ENSMUST00000210101.2 ENSMUST00000210690.2 ENSMUST00000211014.2 |
||