Pregenerated sensors for PRRG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047996Ensembl transcript IDs: ENSMUST00000114024.9, ENSMUST00000114025.8, ENSMUST00000177904.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCTTTATGGGTGATGTGGTAGAAGTTAGTTGTACACAAATTGGATaGCACACATTTGGTTATATGCATACATGTGTATTCCTTACAGTA | + |
|
Preference number: 1 (lower is better) Translates to: LFMGDVVEVSCTQIG*HTFGYMHTCVFLTV Trigger: TACTGTAAGGAATACACATGTATGCATATAACCAAATGTGTGCCATCCAATTTGTGTACAACTAACTTCTACCACATCACCCATAAAGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTCCACATGATGAGGAATaGAGTAGTCAGTACCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: ALLSNPVVLKIWISGSLLPHDEE*SSQYLL Trigger: GAGTAGGTACTGACTACTCCATTCCTCATCATGTGG...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTACCACATGATGAGGAATaGAGTAGTCAGTACCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: LWSSLLHFSLCKSSDRILPHDEE*SSQYLL Trigger: GAGTAGGTACTGACTACTCCATTCCTCATCATGTGG...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTCTCTGTCTCTCTGTTTaGGATGTTTCTAAAATTGAG | + |
|
Preference number: 2 (lower is better) Translates to: ALLSNPVVLKIWISGSLLLCLSV*DVSKIE Trigger: CTCAATTTTAGAAACATCTCAAACAGAGAGACAGAG...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTTTATGGGCCACAATTTaGAAATTGCTAGTCTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: ALLSNPVVLKIWISGSLLLWATI*KLLVSS Trigger: AGATGAGACTAGCAATTTTCAAATTGTGGCCCATAA...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTTGGATGGCACACATTTaGTTATATGCATACATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ALLSNPVVLKIWISGSLLWMAHI*LYAYMC Trigger: ACACATGTATGCATATAACCAAATGTGTGCCATCCA...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCCTCTGTCTCTCTGTTTaGGATGTTTCTAAAATTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LSNPVVLKIWISGSLLKLLCLSV*DVSKIE Trigger: CTCAATTTTAGAAACATCTCAAACAGAGAGACAGAG...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCACACGCCATCTCATTTaGCCTTTTTCAATACTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSNPVVLKIWISGSLLKLTRHLI*PFSILS Trigger: AGAAAGTATTGAAAAAGGTCAAATGAGATGGCGTGT...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTTGTACACAAATTGGATaGCACACATTTGGTTATATG | + |
|
Preference number: 2 (lower is better) Translates to: ALLSNPVVLKIWISGSLLCTQIG*HTFGYM Trigger: CATATAACCAAATGTGTGCCATCCAATTTGTGTACA...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTCTCTGTCTCTCTGTTTaGGATGTTTCTAAAATTGAG | + |
|
Preference number: 2 (lower is better) Translates to: QYLLPVINTNTISLPRNTLCLSV*DVSKIE Trigger: CTCAATTTTAGAAACATCTCAAACAGAGAGACAGAG...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTTGGATGGCACACATTTaGTTATATGCATACATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: QYLLPVINTNTISLPRNTWMAHI*LYAYMC Trigger: ACACATGTATGCATATAACCAAATGTGTGCCATCCA...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCTGTACACAAATTGGATaGCACACATTTGGTTATATG | + |
|
Preference number: 2 (lower is better) Translates to: LSNPVVLKIWISGSLLKLCTQIG*HTFGYM Trigger: CATATAACCAAATGTGTGCCATCCAATTTGTGTACA...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCAGCAATATTGTCATGTaGAGACCATTATCAAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: LSNPVVLKIWISGSLLKLSNIVM*RPLSRY Trigger: GTATCTTGATAATGGTCTCCACATGACAATATTGCT...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTACTGTCTATGAATCCTaGCTTTTCAATTTTTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: QYLLPVINTNTISLPRNTTVYES*LFNFCE Trigger: CTCACAAAAATTGAAAAGGCAGGATTCATAGACAGT...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR GCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTAACTGTCTATGAATCCTaGCTTTTCAATTTTTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LWSSLLHFSLCKSSDRILTVYES*LFNFCE Trigger: CTCACAAAAATTGAAAAGGCAGGATTCATAGACAGT...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTATGTACACAAATTGGATaGCACACATTTGGTTATATG | + |
|
Preference number: 2 (lower is better) Translates to: LWSSLLHFSLCKSSDRILCTQIG*HTFGYM Trigger: CATATAACCAAATGTGTGCCATCCAATTTGTGTACA...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTTTAATGGAGCAGTGTTaGGTAATCAGCCAAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ALLSNPVVLKIWISGSLLLMEQC*VISQEG Trigger: TCCTTCTTGGCTGATTACCAAACACTGCTCCATTAA...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTTTGGATGGCACACATTaGGTTATATGCATACATGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALLSNPVVLKIWISGSLLLDGTH*VICIHV Trigger: CACATGTATGCATATAACCAAATGTGTGCCATCCAA...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAATTGGCACAGCTTTaGTACAGTCCAGATAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALLSNPVVLKIWISGSLLKLAQL*YSPDNV Trigger: CACATTATCTGGACTGTACAAAAGCTGTGCCAATTT...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTATTAATGGAGCAGTGTTaGGTAATCAGCCAAGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LWSSLLHFSLCKSSDRILLMEQC*VISQEG Trigger: TCCTTCTTGGCTGATTACCAAACACTGCTCCATTAA...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTTTTATGGGCCACAATTaGAAAATTGCTAGTCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: ALLSNPVVLKIWISGSLLFMGHN*KIASLI Trigger: GATGAGACTAGCAATTTTCAAATTGTGGCCCATAAA...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTTTGGATGGCACACATTaGGTTATATGCATACATGTG | + |
|
Preference number: 3 (lower is better) Translates to: QYLLPVINTNTISLPRNTLDGTH*VICIHV Trigger: CACATGTATGCATATAACCAAATGTGTGCCATCCAA...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTATTGGATGGCACACATTaGGTTATATGCATACATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LWSSLLHFSLCKSSDRILLDGTH*VICIHV Trigger: CACATGTATGCATATAACCAAATGTGTGCCATCCAA...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCTACACGCCATCTCATTaGACCTTTTTCAATACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSNPVVLKIWISGSLLKLYTPSH*TFFNTF Trigger: GAAAGTATTGAAAAAGGTCAAATGAGATGGCGTGTA...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCTTTATGGGCCACAATTaGAAAATTGCTAGTCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: LSNPVVLKIWISGSLLKLFMGHN*KIASLI Trigger: GATGAGACTAGCAATTTTCAAATTGTGGCCCATAAA...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTATTAGTTGTACACAAATaGGATGGCACACATTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LWSSLLHFSLCKSSDRILLVVHK*DGTHLV Trigger: AACCAAATGTGTGCCATCCAATTTGTGTACAACTAA...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTTTAGTTGTACACAAATaGGATGGCACACATTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QYLLPVINTNTISLPRNTLVVHK*DGTHLV Trigger: AACCAAATGTGTGCCATCCAATTTGTGTACAACTAA...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR GCA 72 bp | ACTTTACAAGAACAAAAACCTAACTTAGTGACAGGATaGCTTGCTCTTTTGTCCAATCCTGTAGTTCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TLQEQKPNLVTG*LALLSNPVVLK Trigger: TTTAAGAACTACAGGATTGGACAAAAGAGCAAGGCATCCTGTCACTAAGTTAGGTTTTTGTTCTTGTAAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTGTGGGGGATCACAGTTaGAAAGGCGAGTGGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSNPVVLKIWISGSLLVGDHS*KGEWKP Trigger: CGGTTTCCACTCGCCTTTCCAACTGTGATCCCCCAC...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCGTGGGGGATCACAGTTaGAAAGGCGAGTGGAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: LSNPVVLKIWISGSLLKLVGDHS*KGEWKP Trigger: CGGTTTCCACTCGCCTTTCCAACTGTGATCCCCCAC...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAGTTGGAAAGGCGAGTaGAAACCGAATCTGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLSNPVVLKIWISGSLLSWKGE*KPNLNA Trigger: GGCGTTCAGATTCGGTTTCCACTCGCCTTTCCAACT...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAGCAATGGCACTAGCTaGACTGGAGTTGACTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLSNPVVLKIWISGSLLSNGTS*TGVDYV Trigger: GACATAGTCAACTCCAGTTCAGCTAGTGCCATTGCT...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTTTCCTCATAGGTAGGTaGGGGATCACAGTTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSNPVVLKIWISGSLLFLIGR*GITVGK Trigger: CTTTCCAACTGTGATCCCCCACCTACCTATGAGGAA...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTATCAAAGACTTCATCTaGTGGAGGAGGTGGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALLSNPVVLKIWISGSLLIKDFI*WRRWSD Trigger: ATCACTCCACCTCCTCCACCAGATGAAGTCTTTGAT...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTAGTTGGAAAGGCGAGTaGAAACCGAATCTGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: QYLLPVINTNTISLPRNTSWKGE*KPNLNA Trigger: GGCGTTCAGATTCGGTTTCCACTCGCCTTTCCAACT...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTAAGTTGGAAAGGCGAGTaGAAACCGAATCTGAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWSSLLHFSLCKSSDRILSWKGE*KPNLNA Trigger: GGCGTTCAGATTCGGTTTCCACTCGCCTTTCCAACT...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCTTCCTCATAGGTAGGTaGGGGATCACAGTTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSNPVVLKIWISGSLLKLFLIGR*GITVGK Trigger: CTTTCCAACTGTGATCCCCCACCTACCTATGAGGAA...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTATGATGTTAAGTTGCTaGGGGAAAGGAATGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLSNPVVLKIWISGSLLMMLSC*GKGMWL Trigger: AAGCCACATTCCTTTCCCTCAGCAACTTAACATCAT...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR TCA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTAGCAATGGCACTAGCTaGACTGGAGTTGACTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QYLLPVINTNTISLPRNTSNGTS*TGVDYV Trigger: GACATAGTCAACTCCAGTTCAGCTAGTGCCATTGCT...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR GCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTCTGGAGACAATGCACTaGTATCAAAGACTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLSNPVVLKIWISGSLLLETMH*YQRLHL Trigger: CAGATGAAGTCTTTGATAGCAGTGCATTGTCTCCAG...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTCTTCAAAAAGCCCATTaGCTCTTGGGTAGCGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ALLSNPVVLKIWISGSLLLQKAH*LLGSVL Trigger: TAAAACGCTACCCAAGAGCCAATGGGCTTTTTGAAG...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTTTCCTCATAGGTAGGTaGGGGATCACAGTTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QYLLPVINTNTISLPRNTFLIGR*GITVGK Trigger: CTTTCCAACTGTGATCCCCCACCTACCTATGAGGAA...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCTACAGATTTCTTCTCTaGACTCACGCTCAATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSNPVVLKIWISGSLLKLYRFLL*THAQCC Trigger: GCAACATTGAGCGTGAGTGCAGAGAAGAAATCTGTA...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTAGGTTTCTCCTTGTTGTaGTTTTGTGTAGGTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWSSLLHFSLCKSSDRILGFSLL*FCVGAP Trigger: TGGAGCACCTACACAAAAGCACAACAAGGAGAAACC...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCCTGGAGACAATGCACTaGTATCAAAGACTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSNPVVLKIWISGSLLKLLETMH*YQRLHL Trigger: CAGATGAAGTCTTTGATAGCAGTGCATTGTCTCCAG...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCAGTCACTTCCTCTGTTaGTTTCTCCTTGTTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSNPVVLKIWISGSLLKLSHFLC*FLLVVL Trigger: AAGCACAACAAGGAGAAACCAACAGAGGAAGTGACT...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTAATCAAAGACTTCATCTaGTGGAGGAGGTGGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LWSSLLHFSLCKSSDRILIKDFI*WRRWSD Trigger: ATCACTCCACCTCCTCCACCAGATGAAGTCTTTGAT...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR CAA 72 bp | TCAAGGATTCCACATATAAGCAATGTAGGTGGAGGTTaGAAAATCATACTATTGGAGGAACCTAGAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRIPHISNVGGG*KIILLEEPRAD Trigger: ATCTGCTCTAGGTTCCTCCAATAGTATGATTTTCAAACCTCCACCTACATTGCTTATATGTGGAATCCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR TCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTAATGATGTTAAGTTGCTaGGGGAAAGGAATGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWSSLLHFSLCKSSDRILMMLSC*GKGMWL Trigger: AAGCCACATTCCTTTCCCTCAGCAACTTAACATCAT...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR GCA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCACTCACGCTCAATGTTaGCCTGTCTTATTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSNPVVLKIWISGSLLKLTHAQC*PVLFLQ Trigger: TTGAAGAAATAAGACAGGGCAACATTGAGCGTGAGT...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR GCA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTTACAGATTTCTTCTCTaGACTCACGCTCAATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QYLLPVINTNTISLPRNTYRFLL*THAQCC Trigger: GCAACATTGAGCGTGAGTGCAGAGAAGAAATCTGTA...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTACTGGAGACAATGCACTaGTATCAAAGACTTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWSSLLHFSLCKSSDRILLETMH*YQRLHL Trigger: CAGATGAAGTCTTTGATAGCAGTGCATTGTCTCCAG...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR GCA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTAAACCCTGGAGACAATaGACTGCTATCAAAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QYLLPVINTNTISLPRNTKPWRQ*TAIKDF Trigger: GAAGTCTTTGATAGCAGTGCATTGTCTCCAGGGTTT...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTAAAACCCTGGAGACAATaGACTGCTATCAAAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWSSLLHFSLCKSSDRILKPWRQ*TAIKDF Trigger: GAAGTCTTTGATAGCAGTGCATTGTCTCCAGGGTTT...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTACTTCAAAAAGCCCATTaGCTCTTGGGTAGCGTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LWSSLLHFSLCKSSDRILLQKAH*LLGSVL Trigger: TAAAACGCTACCCAAGAGCCAATGGGCTTTTTGAAG...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTTTTCAAAAGCCTCTCTaGCTTCTTCATATGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALLSNPVVLKIWISGSLLFQKPL*LLHMYR Trigger: TCTGTACATATGAAGAAGCCAGAGAGGCTTTTGAAA...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTAACTCACGCTCAATGTTaGCCTGTCTTATTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWSSLLHFSLCKSSDRILTHAQC*PVLFLQ Trigger: TTGAAGAAATAAGACAGGGCAACATTGAGCGTGAGT...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CCA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTATTTCAAAAGCCTCTCTaGCTTCTTCATATGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWSSLLHFSLCKSSDRILFQKPL*LLHMYR Trigger: TCTGTACATATGAAGAAGCCAGAGAGGCTTTTGAAA...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| 3UTR CAA 72 bp | CAAAAACCTAACTTAGTGACAGGATGCCTTGCTCTTTaGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKPNLVTGCLAL*SNPVVLKIWIS Trigger: AGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGCAAGGCATCCTGTCACTAAGTTAGGTTTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS TCA 90 bp | GGTAGGTGGGGGATCACAGTTGGAAAGGCGAGTGGAAACCGAATCTaGACGCCCAACAACATATTCCAAAAACCCTGGAGACAATGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GRWGITVGKASGNRI*TPNNIFQKPWRQCT Trigger: AGTGCATTGTCTCCAGGGTTTTTGGAATATGTTGTTGGGCGTTCAGATTCGGTTTCCACTCGCCTTTCCAACTGTGATCCCCCACCTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS TCA 90 bp | AAGACTTCATCTGGTGGAGGAGGTGGAGTGATGATGTTAAGTTGCTaGGGGAAAGGAATGTGGCTTTCAGTCACTGTCTGTCTCCGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KTSSGGGGGVMMLSC*GKGMWLSVTVCLRV Trigger: AACTCGGAGACAGACAGTGACTGAAAGCCACATTCCTTTCCCTCAGCAACTTAACATCATCACTCCACCTCCTCCACCAGATGAAGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS CCA 90 bp | TGGAGACAATGCACTGCTATCAAAGACTTCATCTGGTGGAGGAGGTaGAGTGATGATGTTAAGTTGCTGAGGGAAAGGAATGTGGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WRQCTAIKDFIWWRR*SDDVKLLRERNVAF Trigger: GAAAGCCACATTCCTTTCCCTCAGCAACTTAACATCATCACTCCACCTCCTCCACCAGATGAAGTCTTTGATAGCAGTGCATTGTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS CCA 90 bp | TTCCAAAAACCCTGGAGACAATGCACTGCTATCAAAGACTTCATCTaGTGGAGGAGGTGGAGTGATGATGTTAAGTTGCTGAGGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FQKPWRQCTAIKDFI*WRRWSDDVKLLRER Trigger: CCTTTCCCTCAGCAACTTAACATCATCACTCCACCTCCTCCACCAGATGAAGTCTTTGATAGCAGTGCATTGTCTCCAGGGTTTTTGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTGGTGGGGGATCACAGTaGGAAAGGCGAGTGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: ALLSNPVVLKIWISGSLLGGGSQ*ERRVET Trigger: GGTTTCCACTCGCCTTTCCAACTGTGATCCCCCACC...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS CCA 90 bp | CAAAAACCCTGGAGACAATGCACTGCTATCAAAGACTTCATCTGGTaGAGGAGGTGGAGTGATGATGTTAAGTTGCTGAGGGAAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QKPWRQCTAIKDFIW*RRWSDDVKLLRERN Trigger: ATTCCTTTCCCTCAGCAACTTAACATCATCACTCCACCTCCTCCACCAGATGAAGTCTTTGATAGCAGTGCATTGTCTCCAGGGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTAGGTGGGGGATCACAGTaGGAAAGGCGAGTGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: LWSSLLHFSLCKSSDRILGGGSQ*ERRVET Trigger: GGTTTCCACTCGCCTTTCCAACTGTGATCCCCCACC...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTCAGTCACTTCCTCTGTaGGTTTCTCCTTGTTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALLSNPVVLKIWISGSLLQSLPL*VSPCCA Trigger: AGCACAACAAGGAGAAACCAACAGAGGAAGTGACTG...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCAAAGCCCATTGGCTCTaGGGTAGCGTTTTAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSNPVVLKIWISGSLLKLKAHWL*GSVLVL Trigger: CAGTACTAAAACGCTACCCAAGAGCCAATGGGCTTT...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTCTCCTTGTTGTGCTTTaGTGTAGGTGCTCCAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: ALLSNPVVLKIWISGSLLLLVVL*CRCSKT Trigger: AGTTTTGGAGCACCTACACAAAAGCACAACAAGGAG...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCCGTTTTAGTACTGAGTaGGCTTTTTCTTCCGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSNPVVLKIWISGSLLKLRFSTE*AFSSVR Trigger: CCTCACGGAAGAAAAAGCCAACTCAGTACTAAAACG...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTAAAAGCCCATTGGCTCTaGGGTAGCGTTTTAGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LWSSLLHFSLCKSSDRILKAHWL*GSVLVL Trigger: CAGTACTAAAACGCTACCCAAGAGCCAATGGGCTTT...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCGTTGGTTTCTCCTTGTaGTGCTTTTGTGTAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LSNPVVLKIWISGSLLKLVGFSL*CFCVGA Trigger: AGCACCTACACAAAAGCACAACAAGGAGAAACCAAC...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTACAGTCACTTCCTCTGTaGGTTTCTCCTTGTTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LWSSLLHFSLCKSSDRILQSLPL*VSPCCA Trigger: AGCACAACAAGGAGAAACCAACAGAGGAAGTGACTG...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTTTTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTCTAGCTGAACTGGAGTaGACTATGTCCTCATATTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALLSNPVVLKIWISGSLLLAELE*TMSSYS Trigger: AGAATATGAGGACATAGTCAACTCCAGTTCAGCTAG...AAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAAAAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTCGTTTTAGTACTGAGTaGGCTTTTTCTTCCGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QYLLPVINTNTISLPRNTRFSTE*AFSSVR Trigger: CCTCACGGAAGAAAAAGCCAACTCAGTACTAAAACG...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTCACTCACGCTCAATGTaGCCCTGTCTTATTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QYLLPVINTNTISLPRNTHSRSM*PCLISS Trigger: TGAAGAAATAAGACAGGGCAACATTGAGCGTGAGTG...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | CAGTACCTACTCCCTGTCATTAACACAAACACTATTTCATTACCTAGAAATACTGTTGGTTTCTCCTTGTaGTGCTTTTGTGTAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QYLLPVINTNTISLPRNTVGFSL*CFCVGA Trigger: AGCACCTACACAAAAGCACAACAAGGAGAAACCAAC...AGTATTTCTAGGTAATGAAATAGTGTTTGTGTTAATGACAGGGAGTAGGTACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCCAATCCTGTAGTTCTTAAAATTTGGATTTCTGGATCCCTCCTTAAACTCGTCTGTCTCCGAGTTTaGTTTCTTAGAAAGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSNPVVLKIWISGSLLKLVCLRV*FLRKHL Trigger: GAGATGCTTTCTAAGAAACAAAACTCGGAGACAGAC...GAGTTTAAGGAGGGATCCAGAAATCCAAATTTTAAGAACTACAGGATTGGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTAGTCTGTCTCCGAGTTTaGTTTCTTAGAAAGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LWSSLLHFSLCKSSDRILVCLRV*FLRKHL Trigger: GAGATGCTTTCTAAGAAACAAAACTCGGAGACAGAC...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS-3UTR CAA 90 bp | CTATGGAGCAGCCTGTTACATTTCTCATTATGTAAAAGCTCTGATAGAATTCTACTAGCTGAACTGGAGTaGACTATGTCCTCATATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWSSLLHFSLCKSSDRILLAELE*TMSSYS Trigger: AGAATATGAGGACATAGTCAACTCCAGTTCAGCTAG...TAGAATTCTATCAGAGCTTTTACATAATGAGAAATGTAACAGGCTGCTCCATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS CCA 72 bp | CAGGTTCACCTGGCCGGTGGCTTCCTCATAGGTAGGTaGGGGATCACAGTTGGAAAGGCGAGTGGAAACCGA | + |
|
Preference number: 6 (lower is better) Translates to: QVHLAGGFLIGR*GITVGKASGNR Trigger: TCGGTTTCCACTCGCCTTTCCAACTGTGATCCCCCACCTACCTATGAGGAAGCCACCGGCCAGGTGAACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS TCA 72 bp | GGTGGTGACCACAGGCACCATAGCAATGGCACTAGCTaGACTGGAGTTGACTATGTCCTCATATTCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGDHRHHSNGTS*TGVDYVLIFWW Trigger: CCACCAGAATATGAGGACATAGTCAACTCCAGTTCAGCTAGTGCCATTGCTATGGTGCCTGTGGTCACCACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS CCA 72 bp | CCCTGGAGACAATGCACTGCTATCAAAGACTTCATCTaGTGGAGGAGGTGGAGTGATGATGTTAAGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PWRQCTAIKDFI*WRRWSDDVKLL Trigger: CAGCAACTTAACATCATCACTCCACCTCCTCCACCAGATGAAGTCTTTGATAGCAGTGCATTGTCTCCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS CCA 72 bp | TGGAGACAATGCACTGCTATCAAAGACTTCATCTGGTaGAGGAGGTGGAGTGATGATGTTAAGTTGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: WRQCTAIKDFIW*RRWSDDVKLLR Trigger: CCTCAGCAACTTAACATCATCACTCCACCTCCTCCACCAGATGAAGTCTTTGATAGCAGTGCATTGTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS GCA 72 bp | AAACCAGTCACTTCCTCTGTTGGTTTCTCCTTGTTGTaGTTTTGTGTAGGTGCTCCAAAACTCCTTAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KPVTSSVGFSLL*FCVGAPKLLSF Trigger: AAAACTAAGGAGTTTTGGAGCACCTACACAAAAGCACAACAAGGAGAAACCAACAGAGGAAGTGACTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||
| CDS CAA 72 bp | AAATTGAAACCAGTCACTTCCTCTGTTGGTTTCTCCTaGTTGTGCTTTTGTGTAGGTGCTCCAAAACTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KLKPVTSSVGFS*LCFCVGAPKLL Trigger: AAGGAGTTTTGGAGCACCTACACAAAAGCACAACAAGGAGAAACCAACAGAGGAAGTGACTGGTTTCAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000114024.9 ENSMUST00000114025.8 ENSMUST00000177904.8 |
||