RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRRC2C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040225

Ensembl transcript IDs: ENSMUST00000028016.16, ENSMUST00000182149.8, ENSMUST00000182331.2, ENSMUST00000182393.8, ENSMUST00000182593.8, ENSMUST00000182660.8, ENSMUST00000183011.8, ENSMUST00000183223.8

Found 1399 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAATGGCCTGGAACTCAAGAGAGCTGCCTGCCTCTGCCTCCCGAGTaGTGGGATTACAGAGCTGCCTGCCCCTGCCTCCCGAGTGCTGGG +
Preference number: 1 (lower is better)
Translates to: EWPGTQESCLPLPPE*WDYRAACPCLPSAG
Trigger: CCCAGCACTCGGGAGGCAGGGGCAGGCAGCTCTGTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGCTCTCTTGAGTTCCAGGCCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR TCA 90 bp CCGACCCCGATTTCTGTGTGTAGGCCTGGCTGTCCTGGAGTTCACTaGATGGCCTGGAACTCAAGAGAGCTGCCTGCCTCTGCCTCCCGA +
Preference number: 1 (lower is better)
Translates to: PTPISVCRPGCPGVH*MAWNSRELPASASR
Trigger: TCGGGAGGCAGAGGCAGGCAGCTCTCTTGAGTTCCAGGCCATTCAGTGAACTCCAGGACAGCCAGGCCTACACACAGAAATCGGGGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR CCA 90 bp CCCCGATTTCTGTGTGTAGGCCTGGCTGTCCTGGAGTTCACTGAATaGCCTGGAACTCAAGAGAGCTGCCTGCCTCTGCCTCCCGAGTGC +
Preference number: 1 (lower is better)
Translates to: PRFLCVGLAVLEFTE*PGTQESCLPLPPEC
Trigger: GCACTCGGGAGGCAGAGGCAGGCAGCTCTCTTGAGTTCCAGGCCATTCAGTGAACTCCAGGACAGCCAGGCCTACACACAGAAATCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR GCA 90 bp GCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGTAAATaGTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACT +
Preference number: 1 (lower is better)
Translates to: ASLWSLTVQQLCHCK*SMPLVSHRMMSQTT
Trigger: AGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAGCATTTACAGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR TCA 90 bp AGCTCTGTCACTGTAAATGCTCTATGCCCCTTGTGTCTCACAGGATaGTGTCACAGACCACTTTACCCCTGTGGCTGCTGGCTGGCATTA +
Preference number: 1 (lower is better)
Translates to: SSVTVNALCPLCLTG*CHRPLYPCGCWLAL
Trigger: TAATGCCAGCCAGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAGCATTTACAGTGACAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR TCA 90 bp CTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTaGAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTC +
Preference number: 1 (lower is better)
Translates to: LYALTDCLRTCIQTN*RCKCYTGGASLWSL
Trigger: GAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR TCA 90 bp AAGGTCTCACACACATACAGATGGGCCTCAAACTTACTACCTAGATaGGAATGGCCTTTAACTCCTGATCATCCTGCTGCCATCTTGCCA +
Preference number: 1 (lower is better)
Translates to: KVSHTYRWASNLLPR*EWPLTPDHPAAILP
Trigger: TGGCAAGATGGCAGCAGGATGATCAGGAGTTAAAGGCCATTCTCATCTAGGTAGTAAGTTTGAGGCCCATCTGTATGTGTGTGAGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR-3UTR GCA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGAGAGCTGCCTGCCTCTaGCTCCCGAGTGCTGGGATT +
Preference number: 2 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKRAACL*LPSAGI
Trigger: AATCCCAGCACTCGGGAGGCAGAGGCAGGCAGCTCT...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR-3UTR GCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCAGATTACAGAGCTGCCTaGCCCTGCCTCCCGAGTGCT +
Preference number: 2 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASDYRAA*PCLPSA
Trigger: AGCACTCGGGAGGCAGGGGCAGGCAGCTCTGTAATC...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR-3UTR GCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCAAGAGCTGCCTGCCTCTaGCTCCCGAGTGCTGGGATT +
Preference number: 2 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASRAACL*LPSAGI
Trigger: AATCCCAGCACTCGGGAGGCAGAGGCAGGCAGCTCT...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR CAA 90 bp TTTCCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTaGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTATCTGTTTGT +
Preference number: 2 (lower is better)
Translates to: FPDRCQEGHSAFQGY*YHCPLSGFCLLSVC
Trigger: ACAAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
3UTR-3UTR TCA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGCCACCTCTGACTGAGTaGGCTTTAAGCTTCTTGACC +
Preference number: 2 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKPPLTE*ALSFLT
Trigger: GGTCAAGAAGCTTAAAGCTCACTCAGTCAGAGGTGG...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR-3UTR TCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCTGGCTGGCATTATTTaGCTTCACTTTCCCTACCCA +
Preference number: 2 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLAGII*LHFPYP
Trigger: TGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR TCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGCTGGCTGGCATTATTTaGCTTCACTTTCCCTACCCA +
Preference number: 2 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVLAGII*LHFPYP
Trigger: TGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAG...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR TCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCTGTATACAAACCAACTaGAGATGCAAATGTTACACC +
Preference number: 2 (lower is better)
Translates to: TQGSRRATADGFMGPPSVCIQTN*RCKCYT
Trigger: GGTGTAACATTTGCATCTTCAGTTGGTTTGTATACA...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR GCA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGATCCTGCTGCCATCTTaGCATCAAAGTTTGATCATC +
Preference number: 2 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKILLPS*HQSLII
Trigger: GATGATCAAACTTTGATGGCAAGATGGCAGCAGGAT...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR-3UTR GCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGGATTACAGAGCTGCCTaGCCCTGCCTCCCGAGTGCT +
Preference number: 2 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRDYRAA*PCLPSA
Trigger: AGCACTCGGGAGGCAGGGGCAGGCAGCTCTGTAATC...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR-3UTR TCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTCTGGCTGGCATTATTTaGCTTCACTTTCCCTACCCA +
Preference number: 2 (lower is better)
Translates to: LVYKPTEDANVTPEVRACLAGII*LHFPYP
Trigger: TGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAG...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR CCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCATCACACACATACAGATaGGCCTCAAACTTACTACCT +
Preference number: 2 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASSHTYR*ASNLLP
Trigger: AGGTAGTAAGTTTGAGGCCCATCTGTATGTGTGTGA...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR-3UTR CCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACCTGCCTCCCGAGTGCTaGGATTACAGAGCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNLPPEC*DYRAAC
Trigger: GCAGGCAGCTCTGTAATCCCAGCACTCGGGAGGCAG...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAACCACTTTACCCCTGTaGCTGCTGGCTGGCATTATT +
Preference number: 2 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRTTLPL*LLAGII
Trigger: AATAATGCCAGCCAGCAGCCACAGGGGTAAAGTGGT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR TCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGAACTTACTACCTAGATaGGAATGGCCTTTAACTCCT +
Preference number: 2 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWNLLPR*EWPLTP
Trigger: AGGAGTTAAAGGCCATTCTCATCTAGGTAGTAAGTT...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGACCACTTTACCCCTGTaGCTGCTGGCTGGCATTATT +
Preference number: 2 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRTTLPL*LLAGII
Trigger: AATAATGCCAGCCAGCAGCCACAGGGGTAAAGTGGT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCTGGCTGGCATTATTTaGCTTCACTTTCCCTACCCA +
Preference number: 2 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRLAGII*LHFPYP
Trigger: TGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACACCACTTTACCCCTGTaGCTGCTGGCTGGCATTATT +
Preference number: 2 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYTTLPL*LLAGII
Trigger: AATAATGCCAGCCAGCAGCCACAGGGGTAAAGTGGT...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATATTGTGTCTCACAGGATaGTGTCACAGACCACTTTAC +
Preference number: 2 (lower is better)
Translates to: MLLRTKLYALTDCLRTCILCLTG*CHRPLY
Trigger: GTAAAGTGGTCTGTGACATCATCCTGTGAGACACAA...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR GCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCGCAGAAGCTCTATGTTaGTCATCTGAGTGTGTTCAA +
Preference number: 2 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETAEALC*SSECVQ
Trigger: TTGAACACACTCAGATGAGCAACATAGAGCTTCTGC...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR GCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAGCAGAAGCTCTATGTTaGTCATCTGAGTGTGTTCAA +
Preference number: 2 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGAEALC*SSECVQ
Trigger: TTGAACACACTCAGATGAGCAACATAGAGCTTCTGC...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR TCA 90 bp CAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGAATGTTTAGAAACCTGTATACAAACCAACTaGAGATGCAAATGTTACACC +
Preference number: 2 (lower is better)
Translates to: QKTTDLKSLANVLECLETCIQTN*RCKCYT
Trigger: GGTGTAACATTTGCATCTTCAGTTGGTTTGTATACA...GGTTTCTAAACATTCAAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR GCA 72 bp CCTCTGCCTCCCGAGTGCTGGGATTACAGAGCTGCCTaGCCCTGCCTCCCGAGTGCTGGGATTACAGCCGTG +
Preference number: 3 (lower is better)
Translates to: PLPPECWDYRAA*PCLPSAGITAV
Trigger: CACGGCTGTAATCCCAGCACTCGGGAGGCAGGGGCAGGCAGCTCTGTAATCCCAGCACTCGGGAGGCAGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR GCA 72 bp GGAACTCAAGAGAGCTGCCTGCCTCTGCCTCCCGAGTaGTGGGATTACAGAGCTGCCTGCCCCTGCCTCCCG +
Preference number: 3 (lower is better)
Translates to: GTQESCLPLPPE*WDYRAACPCLP
Trigger: CGGGAGGCAGGGGCAGGCAGCTCTGTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGCTCTCTTGAGTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR GCA 72 bp CTGGGATTACAGAGCTGCCTGCCCCTGCCTCCCGAGTaGTGGGATTACAGCCGTGCACTACCACACGTGTCT +
Preference number: 3 (lower is better)
Translates to: LGLQSCLPLPPE*WDYSRALPHVS
Trigger: AGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAGGCAGGGGCAGGCAGCTCTGTAATCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR CCA 72 bp CTGTGTGTAGGCCTGGCTGTCCTGGAGTTCACTGAATaGCCTGGAACTCAAGAGAGCTGCCTGCCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: LCVGLAVLEFTE*PGTQESCLPLP
Trigger: AGGCAGAGGCAGGCAGCTCTCTTGAGTTCCAGGCCATTCAGTGAACTCCAGGACAGCCAGGCCTACACACAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR TCA 72 bp ATTTCTGTGTGTAGGCCTGGCTGTCCTGGAGTTCACTaGATGGCCTGGAACTCAAGAGAGCTGCCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: ISVCRPGCPGVH*MAWNSRELPAS
Trigger: AGAGGCAGGCAGCTCTCTTGAGTTCCAGGCCATTCAGTGAACTCCAGGACAGCCAGGCCTACACACAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR GCA 72 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTaGGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: TNQLKMQMLHRR*EPVEPHCAAAL
Trigger: CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCGCTGGCTGGCATTATTaGACTTCACTTTCCCTACCC +
Preference number: 3 (lower is better)
Translates to: TQGSRRATADGFMGPPSVAGWHY*TSLSLP
Trigger: GGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGC...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR CAA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTCATCCTGCTGCCATCTaGCCATCAAAGTTTGATCAT +
Preference number: 3 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFHPAAI*PSKFDH
Trigger: ATGATCAAACTTTGATGGCAAGATGGCAGCAGGATG...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGCTGGCTGGCATTATTaGACTTCACTTTCCCTACCC +
Preference number: 3 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPAGWHY*TSLSLP
Trigger: GGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR TCA 72 bp ACTGTAAATGCTCTATGCCCCTTGTGTCTCACAGGATaGTGTCACAGACCACTTTACCCCTGTGGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: TVNALCPLCLTG*CHRPLYPCGCW
Trigger: CCAGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAGCATTTACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR GCA 72 bp TGGAGCCTCACTGTGCAGCAGCTCTGTCACTGTAAATaGTCTATGCCCCTTGTGTCTCACAGGATGATGTCA +
Preference number: 3 (lower is better)
Translates to: WSLTVQQLCHCK*SMPLVSHRMMS
Trigger: TGACATCATCCTGTGAGACACAAGGGGCATAGAGCATTTACAGTGACAGAGCTGCTGCACAGTGAGGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR CCA 72 bp GATGTCACAGACCACTTTACCCCTGTGGCTGCTGGCTaGCATTATTTGACTTCACTTTCCCTACCCACCCAT +
Preference number: 3 (lower is better)
Translates to: DVTDHFTPVAAG*HYLTSLSLPTH
Trigger: ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTAAAGTGGTCTGTGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGCGTTTCAGGGTTACTaGTATCACTGTCCACTCTCT +
Preference number: 3 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPAFQGY*YHCPLS
Trigger: AGAGAGTGGACAGTGATACAAGTAACCCTGAAACGC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
3UTR TCA 72 bp CAGTTGGGCGACAGTGACTTAGTAAGAAGGCCAATGTaGCAAAACCCTCTTAACAGGGGTTCTGACCCTGTC +
Preference number: 3 (lower is better)
Translates to: QLGDSDLVRRPM*QNPLNRGSDPV
Trigger: GACAGGGTCAGAACCCCTGTTAAGAGGGTTTTGTCACATTGGCCTTCTTACTAAGTCACTGTCGCCCAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR TCA 72 bp CACACATACAGATGGGCCTCAAACTTACTACCTAGATaGGAATGGCCTTTAACTCCTGATCATCCTGCTGCC +
Preference number: 3 (lower is better)
Translates to: HTYRWASNLLPR*EWPLTPDHPAA
Trigger: GGCAGCAGGATGATCAGGAGTTAAAGGCCATTCTCATCTAGGTAGTAAGTTTGAGGCCCATCTGTATGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR CCA 72 bp TTAAGCTTCTTGACCTCAGGGCAGTCCCTAACTCTTTaGATAACGGCTAGGACCTTTGGTACACTAACAAGC +
Preference number: 3 (lower is better)
Translates to: LSFLTSGQSLTL*ITARTFGTLTS
Trigger: GCTTGTTAGTGTACCAAAGGTCCTAGCCGTTATCCAAAGAGTTAGGGACTGCCCTGAGGTCAAGAAGCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
3UTR CCA 72 bp AGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTaGGTTTTGCCTCCTATCTGTTTGTTCTGTTGCTGT +
Preference number: 3 (lower is better)
Translates to: SVSGLLVSLSTL*VLPPICLFCCC
Trigger: ACAGCAACAGAACAAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
3UTR TCA 72 bp CTTACAGACTGTTTACGTACTTGTATACAAACCAACTaGAGATGCAAATGTTACACCGGAGGTGCGAGCCTG +
Preference number: 3 (lower is better)
Translates to: LTDCLRTCIQTN*RCKCYTGGASL
Trigger: CAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
3UTR-3UTR CAA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCGCTGGCTGGCATTATTaGACTTCACTTTCCCTACCC +
Preference number: 3 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETAGWHY*TSLSLP
Trigger: GGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGC...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTTGGAAGCCCTGCTGCTaGGCCAGGGATGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTWKPCC*ARDGGA
Trigger: GGCTCCACCATCCCTGGCTCAGCAGCAGGGCTTCCA...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTGGAAGCCCTGCTGCTaGGCCAGGGATGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALWKPCC*ARDGGA
Trigger: GGCTCCACCATCCCTGGCTCAGCAGCAGGGCTTCCA...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGAAACGGCTGTGCCATaGGCACTGTGGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALETAVP*ALWRGL
Trigger: CAGCCCCCGCCACAGTGCGCATGGCACAGCCGTTTC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGGCCCTGCCCGAGGCTaGTTCTGCCGCTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSGPARG*FCRCSL
Trigger: TAAAGAGCAGCGGCAGAAGCAGCCTCGGGCAGGGCC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGCCCCCAAACTCAGCTaGGCTTGGTGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSAPKLS*AWCCPC
Trigger: GCAAGGGCAGCACCAAGCCCAGCTGAGTTTGGGGGC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTAGCACCAGCTGTGCCTaGGGCCTGGTCATCAAATGG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTSTSCA*GLVIKW
Trigger: CCATTTGATGACCAGGCCTCAGGCACAGCTGGTGCT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCAACGAGCATGGCTCATaGGGCCTGTGGTCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSNEHGS*GLWSAE
Trigger: CTCCGCTGACCACAGGCCTCATGAGCCATGCTCGTT...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTAACGCAGCCTGGGCCTaGTTACCTCTGACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTNAAWA*LPLTPD
Trigger: GTCTGGAGTCAGAGGTAATCAGGCCCAGGCTGCGTT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTAACCGCTGCGTGGACTaGAGAACCTCTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTNRCVD*RTSALC
Trigger: GCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGGTT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGGTCAGCACCAGCTGTaGCTGAGGCCTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTGQHQL*LRPGHQ
Trigger: TTGATGACCAGGCCTCAGGCACAGCTGGTGCTGACC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGCCCGAGGCTGCTTCTaGCGCTGCTCTTTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTARGCF*RCSLGS
Trigger: TGAACCTAAAGAGCAGCGGCAGAAGCAGCCTCGGGC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACCGGGGGTGGGACAGTaGATGCAGCTGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPPGVGQ*MQLRLG
Trigger: CCCCAGCCTCAGCTGCATCCACTGTCCCACCCCCGG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTGTCTGGGTCTGGGTCTaGGTCTGCACTGTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFVWVWV*VCTVEA
Trigger: GGCCTCGACAGTGCAGACCCAGACCCAGACCCAGAC...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCTGAGCCAGGGATGGTaGAGCCAATCGCGCATGCTG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSLSQGW*SQSRML
Trigger: CAGCATGCGCGATTGGCTCCACCATCCCTGGCTCAG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCAGCACCAGCTGTGCCTaGGGCCTGGTCATCAAATGG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSSTSCA*GLVIKW
Trigger: CCATTTGATGACCAGGCCTCAGGCACAGCTGGTGCT...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGTGCAGAGTTACCACTaGCAGGGTCAGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALVQSYH*QGQHQL
Trigger: CAGCTGGTGCTGACCCTGTCAGTGGTAACTCTGCAC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTAACAGGAGCCGAGGCTaGGGTTGGAACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFNRSRG*GWNWSW
Trigger: CCAGCTCCAGTTCCAACCTCAGCCTCGGCTCCTGTT...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTGCTGTAGGAGTGACTaGCGCAACTGGGATCTGCGG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSCCRSD*RNWDLR
Trigger: CCGCAGATCCCAGTTGCGTCAGTCACTCCTACAGCA...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGCTGCTGCTGTGCAATaGGGGAAGGCATACAGCTCA +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTAAAVQ*GKAYSS
Trigger: TGAGCTGTATGCCTTCCCTCATTGCACAGCAGCAGC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTCACTGTGGCGGGGGCTaGCTGGAACTGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTHCGGG*LELFLI
Trigger: TATCAGAAACAGTTCCAGTCAGCCCCCGCCACAGTG...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGGGACCAGGTTAGGCTaGGAGAGAATCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSGTRLG*ERIWGA
Trigger: TGCACCCCAGATTCTCTCTCAGCCTAACCTGGTCCC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTCTGACTCCAGACAGTaGTCCACAAGGACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVSDSRQ*STRTPG
Trigger: GCCAGGGGTCCTTGTGGATCACTGTCTGGAGTCAGA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTTGGGGGATGCTGTTGTaGAAGCAACTTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTWGMLL*KQLGRW
Trigger: CCACCTCCCAAGTTGCTTGCACAACAGCATCCCCCA...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTGGTCGGGTAGGTCGCTaGCTTCGGGGCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCGRVGR*LRGLSL
Trigger: TAGAGAGAGGCCCCGAAGGCAGCGACCTACCCGACC...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGGTCAGCACCAGCTGTaGCTGAGGCCTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSGQHQL*LRPGHQ
Trigger: TTGATGACCAGGCCTCAGGCACAGCTGGTGCTGACC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTGGCCCTGCCCGAGGCTaGTTCTGCCGCTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCGPARG*FCRCSL
Trigger: TAAAGAGCAGCGGCAGAAGCAGCCTCGGGCAGGGCC...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGAAACGGCTGTGCCATaGGCACTGTGGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLETAVP*ALWRGL
Trigger: CAGCCCCCGCCACAGTGCGCATGGCACAGCCGTTTC...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGCTGTGCCTGAGGCCTaGTCATCAAATGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALAVPEA*SSNGPL
Trigger: GAGAGGGCCATTTGATGACCAGGCCTCAGGCACAGC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGCTGTGCCTGAGGCCTaGTCATCAAATGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSAVPEA*SSNGPL
Trigger: GAGAGGGCCATTTGATGACCAGGCCTCAGGCACAGC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCCATGGGACTGTGAAGTaGGCATGGACTTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVHGTVK*AWTSQR
Trigger: CCGCTGGGAAGTCCATGCCCACTTCACAGTCCCATG...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTACTGGCCAGTGCCATTaGTGGCCTCTGTACAGGCGC +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFTGQCH*WPLYRR
Trigger: GCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGT...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCACCATTAGACGGCTGTaGGGGCACAGTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSTIRRL*GHSLWK
Trigger: CTTCCACAGACTGTGCCCTCACAGCCGTCTAATGGT...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTATAGAAGCCAGATGTTaGGGGTGGGGTTGCATTGGC +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTIEARC*GWGCIG
Trigger: GCCAATGCAACCCCACCCTCAACATCTGGCTTCTAT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGGCTGTGACTGGAGATaGAGTGGATGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSGCDWR*SGCWNR
Trigger: CCTGTTCCAGCATCCACTTCATCTCCAGTCACAGCC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCATTCCACGCACTGACTaGAGGTGGCTGTGGTGGACT +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVIPRTD*RWLWWT
Trigger: AGTCCACCACAGCCACCTTCAGTCAGTGCGTGGAAT...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGGGATTGGAATCTGCTaGACTGATGTCGGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSGIGIC*TDVGCE
Trigger: CTCGCAGCCGACATCAGTTCAGCAGATTCCAATCCC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCACTGTGGCGGGGGCTaGCTGGAACTGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSHCGGG*LELFLI
Trigger: TATCAGAAACAGTTCCAGTCAGCCCCCGCCACAGTG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTAACGAGCATGGCTCATaGGGCCTGTGGTCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAANEHGS*GLWSAE
Trigger: CTCCGCTGACCACAGGCCTCATGAGCCATGCTCGTT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTCATCCTTGGCTTTTGTaGTCTGGCCTGACTTCTCCG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTHPWLL*SGLTSP
Trigger: CGGAGAAGTCAGGCCAGAGCACAAAAGCCAAGGATG...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCAGACTTGGGAGTAGCTaGCTGCTGAGGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSRLGSS*LLRLSM
Trigger: CATGCTGAGCCTCAGCAGGCAGCTACTCCCAAGTCT...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTATCGAGGGTGGTGGCTaGTTTGAAGATGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTIEGGG*FEDGAE
Trigger: TTCAGCGCCATCTTCAAAGCAGCCACCACCCTCGAT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGGCCCTGCCCGAGGCTaGTTCTGCCGCTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPGPARG*FCRCSL
Trigger: TAAAGAGCAGCGGCAGAAGCAGCCTCGGGCAGGGCC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGACGCAACTGGGATCTaGGGCATTGATGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTDATGI*GIDALE
Trigger: TTCCAGTGCATCAATGCCGCAGATCCCAGTTGCGTC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCCTGGGGTGCAAACTGTaGAGGAAACGGCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVLGCKL*RKRLCH
Trigger: ATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAG...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTCTCCCATGCCTTCCGTaGAGACTCCATCTTTGCATC +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTLPCLP*RLHLCI
Trigger: GATGCAAAGATGGAGTCTGCACGGAAGGCATGGGAG...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGCTCTGCTCTCTGCTTTaGCTGGGGTGCAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALLCSLL*LGCKLC
Trigger: GCACAGTTTGCACCCCAGGCAAAGCAGAGAGCAGAG...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGGACTGAAGAACCTCTaGTCTCTGCTTTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALGLKNL*SLLCLG
Trigger: CCCCAGGCAAAGCAGAGAGCAGAGGTTCTTCAGTCC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCTTATCTTGCCTTGGTaGTCGGGTAGGTCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSLILPW*SGRSLP
Trigger: AGGCAGCGACCTACCCGACCACCAAGGCAAGATAAG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCAACTGGCGCGGAGGGTaGAGCTTGGATTTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVNWRGG*SLDLLS
Trigger: ACTCAGCAAATCCAAGCTCCACCCTCCGCGCCAGTT...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTAATGGGAACTGGAGCTaGGGTGGAGGCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAANGNWS*GGGRSC
Trigger: GCAGCTCCTGCCTCCACCCCAGCTCCAGTTCCCATT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGTCTGGGTCTGGGTCTaGGTCTGCACTGTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHVWVWV*VCTVEA
Trigger: GGCCTCGACAGTGCAGACCCAGACCCAGACCCAGAC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGCTGTTAGAGAGCCATaGGACTGTGAAGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTAVREP*DCEVGM
Trigger: CATGCCCACTTCACAGTCCCATGGCTCTCTAACAGC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCCTGAGCCAGGGATGGTaGAGCCAATCGCGCATGCTG +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVLSQGW*SQSRML
Trigger: CAGCATGCGCGATTGGCTCCACCATCCCTGGCTCAG...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGCCTGCTGGAGAGCACTaGGGGATTGGGCAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALPAGEH*GIGQCY
Trigger: ATAACACTGCCCAATCCCCCAGTGCTCTCCAGCAGG...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGTGCCATGCGCACTGTaGCGGGGGCTGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPVPCAL*RGLTGT
Trigger: AGTTCCAGTCAGCCCCCGCCACAGTGCGCATGGCAC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGTGCCATGCGCACTGTaGCGGGGGCTGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQVPCAL*RGLTGT
Trigger: AGTTCCAGTCAGCCCCCGCCACAGTGCGCATGGCAC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTGGGGCTCTTACCAATaGAGGGACCAGGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVWGSYQ*RDQVRL
Trigger: CAGCCTAACCTGGTCCCTCCATTGGTAAGAGCCCCA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTGGGGCTCTTACCAATaGAGGGACCAGGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALWGSYQ*RDQVRL
Trigger: CAGCCTAACCTGGTCCCTCCATTGGTAAGAGCCCCA...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTGAGGAGGCATCTGACTaGCCAGTGCCATTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCEEASD*PVPLVA
Trigger: GGCCACCAATGGCACTGGCCAGTCAGATGCCTCCTC...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGTGCAGAGTTACCACTaGCAGGGTCAGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAVQSYH*QGQHQL
Trigger: CAGCTGGTGCTGACCCTGTCAGTGGTAACTCTGCAC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGAACAGGAGCCGAGGCTaGGGTTGGAACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLNRSRG*GWNWSW
Trigger: CCAGCTCCAGTTCCAACCTCAGCCTCGGCTCCTGTT...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTGGCTGTGACTGGAGATaGAGTGGATGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFGCDWR*SGCWNR
Trigger: CCTGTTCCAGCATCCACTTCATCTCCAGTCACAGCC...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGACAGTGGATGCAGCTaGGGCTGGGGCAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPDSGCS*GWGKGN
Trigger: GTTCCCCTTGCCCCAGCCTCAGCTGCATCCACTGTC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCAGAGCCATGGGACTGTaGAGTGGGCATGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVRAMGL*SGHGLP
Trigger: GGGAAGTCCATGCCCACTTCACAGTCCCATGGCTCT...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCAGGATCAGTGCTTCTaGCCACAGCTGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAQDQCF*PQLGWV
Trigger: AACCCAGCCCAGCTGTGGTCAGAAGCACTGATCCTG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGGACGGCTCAAACTCTaGGCCTGTGCTTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPGRLKL*ACACGV
Trigger: GACCCCACAAGCACAGGCTCAGAGTTTGAGCCGTCC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTTCTGACTCCAGACAGTaGTCCACAAGGACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAASDSRQ*STRTPG
Trigger: GCCAGGGGTCCTTGTGGATCACTGTCTGGAGTCAGA...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCTCCTTCAGTTCGGATaGACTAAGGATGGATGGGCG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSLLQFG*TKDGWA
Trigger: CGCCCATCCATCCTTAGTGCATCCGAACTGAAGGAG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTCTGGAGGTGGGGGATaGTGTTGTGCAAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVSGGGG*CCASNL
Trigger: CAAGTTGCTTGCACAACAGCATCCCCCACCTCCAGA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGCTCTGCTGCTGCTGTaGAATGAGGGAAGGCATACA +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALALLLL*NEGRHT
Trigger: TGTATGCCTTCCCTCATTGCACAGCAGCAGCAGAGC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGCGGGCTCTGCTGCTaGTGTGCAATGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPCGLCC*CAMREG
Trigger: GCCTTCCCTCATTGCACAGCAGCAGCAGAGCCCGCA...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATGCGGGCTCTGCTGCTaGTGTGCAATGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPCGLCC*CAMREG
Trigger: GCCTTCCCTCATTGCACAGCAGCAGCAGAGCCCGCA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTTGGGAAAGACTGCTCTaGATAAAGGCTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTWERLL*IKAGCD
Trigger: ATCGCAGCCAGCCTTTATGCAGAGCAGTCTTTCCCA...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCTGTGGTCGCCATCATaGTATGCTGTGTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSLWSPS*YAVFQQ
Trigger: CTGCTGGAACACAGCATAGCATGATGGCGACCACAG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCAGAACCTCTGCTCTCTaGTTTGCCTGGGGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVRTSAL*FAWGAN
Trigger: GTTTGCACCCCAGGCAAAGCAGAGAGCAGAGGTTCT...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGCTGTCCATTCAGTTTaGCCTGTGGAGGACCACAAG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSAVHSV*PVEDHK
Trigger: CTTGTGGTCCTCCACAGGCCAAACTGAATGGACAGC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGGCACACCTTCTTGGTaGTGTGCAGAGTTACCACTG +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALGTPSW*CAELPL
Trigger: CAGTGGTAACTCTGCACACCACCAAGAAGGTGTGCC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGGCACACCTTCTTGGTaGTGTGCAGAGTTACCACTG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSGTPSW*CAELPL
Trigger: CAGTGGTAACTCTGCACACCACCAAGAAGGTGTGCC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGTAATTAGCAGTGCTTaGTCCACTGGCACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTVISSA*STGTAA
Trigger: AGCAGCAGTGCCAGTGGACCAAGCACTGCTAATTAC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCCCCCAAACTCAGCTaGGCTTGGTGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVAPKLS*AWCCPC
Trigger: GCAAGGGCAGCACCAAGCCCAGCTGAGTTTGGGGGC...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGACCTGATTGTGCCTTaGCAAGTTCCTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVDLIVP*QVPGAG
Trigger: TCCAGCACCAGGAACTTGCCAAGGCACAATCAGGTC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGAATGGACTAGATGTTaGCGTGGTGCTTCGACCACC +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSEWTRC*RGASTT
Trigger: GGTGGTCGAAGCACCACGCCAACATCTAGTCCATTC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCTGATCAGAGGAAGGTaGCCCAGCAGACTTACCACC +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAALIRGR*PSRLTT
Trigger: GGTGGTAAGTCTGCTGGGTCACCTTCCTCTGATCAG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATAGCACCAGCTGTGCCTaGGGCCTGGTCATCAAATGG +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHSTSCA*GLVIKW
Trigger: CCATTTGATGACCAGGCCTCAGGCACAGCTGGTGCT...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGCACCAGCTGTGCCTaGGGCCTGGTCATCAAATGG +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPSTSCA*GLVIKW
Trigger: CCATTTGATGACCAGGCCTCAGGCACAGCTGGTGCT...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGTGCAGAGTTACCACTaGCAGGGTCAGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHVQSYH*QGQHQL
Trigger: CAGCTGGTGCTGACCCTGTCAGTGGTAACTCTGCAC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAGTGCAGAGTTACCACTaGCAGGGTCAGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPVQSYH*QGQHQL
Trigger: CAGCTGGTGCTGACCCTGTCAGTGGTAACTCTGCAC...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATAGAGCCATGGGACTGTaGAGTGGGCATGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHRAMGL*SGHGLP
Trigger: GGGAAGTCCATGCCCACTTCACAGTCCCATGGCTCT...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGAGCCATGGGACTGTaGAGTGGGCATGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPRAMGL*SGHGLP
Trigger: GGGAAGTCCATGCCCACTTCACAGTCCCATGGCTCT...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGCTTATTCCACGCACTaGCTGAAGGTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAAYSTH*LKVAVV
Trigger: CACCACAGCCACCTTCAGTCAGTGCGTGGAATAAGC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCGCTTATTCCACGCACTaGCTGAAGGTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVAYSTH*LKVAVV
Trigger: CACCACAGCCACCTTCAGTCAGTGCGTGGAATAAGC...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTCTCTGCAGAGGAGACTaGGATCATCGCCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFLCRGD*DHRPNF
Trigger: GAAATTGGGGCGATGATCTCAGTCTCCTCTGCAGAG...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTCTCAACTGTGAAAAGTaGCTTGCAGAAGGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTLNCEK*LAEGRL
Trigger: CAGCCTACCTTCTGCAAGTCACTTTTCACAGTTGAG...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCGGGATTGGAATCTGCTaGACTGATGTCGGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVGIGIC*TDVGCE
Trigger: CTCGCAGCCGACATCAGTTCAGCAGATTCCAATCCC...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCCTGAAAGGCAAGACCTaGTTGTGCCTTGGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVLKGKT*LCLGKF
Trigger: GAACTTGCCAAGGCACAATCAGGTCTTGCCTTTCAG...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCTGAAAGGCAAGACCTaGTTGTGCCTTGGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSLKGKT*LCLGKF
Trigger: GAACTTGCCAAGGCACAATCAGGTCTTGCCTTTCAG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAAACGCAGCCTGGGCCTaGTTACCTCTGACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQNAAWA*LPLTPD
Trigger: GTCTGGAGTCAGAGGTAATCAGGCCCAGGCTGCGTT...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTGCAGTTTCAGGCCTTaGATCCCCAGTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSCSFRP*IPSFFS
Trigger: GCTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCA...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTGCAGTTTCAGGCCTTaGATCCCCAGTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVCSFRP*IPSFFS
Trigger: GCTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCGGATACTCACGAGTGTaGCCTCTACCACCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVGYSRV*PLPPLP
Trigger: TGGCAGAGGTGGTAGAGGGCACACTCGTGAGTATCC...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGAGGTTTAGGAGGTTCTaGCTGCCTTGTGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALRFRRF*LPCVPL
Trigger: CAGTGGAACACAAGGCAGGCAGAACCTCCTAAACCT...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGCTCCCATGCCTTCCGTaGAGACTCCATCTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALLPCLP*RLHLKG
Trigger: ACCTTTAAGATGGAGTCTGCACGGAAGGCATGGGAG...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGCTCACAATGGGAGGTaGTGTAGAAGTTACTGGGGA +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSAHNGR*CRSYWG
Trigger: TCCCCAGTAACTTCTACAGCACCTCCCATTGTGAGC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCAAACTCTGAGCCTGTaGTTGTGGGGTCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAQTLSL*LWGRVL
Trigger: CAGCACACGACCCCACAAGCACAGGCTCAGAGTTTG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTAGCTCTCTTCTGGGGTaGAAACTGTGCAGGAAACGG +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFSSLLG*KLCRKR
Trigger: CCGTTTCCTGCACAGTTTGCACCCCAGAAGAGAGCT...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR GCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGGACTGAAGAACCTCTaGTCTCTGCTTTGCCAACAC +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVGLKNL*SLLCQH
Trigger: GTGTTGGCAAAGCAGAGAGCAGAGGTTCTTCAGTCC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCACCTTGCTTGTTACTaGCCCATGATTTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSHLACY*PMIWEQ
Trigger: CTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTCAGCTGCCTGCAGACTaGGAAATTCCTGCTGAAATT +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTQLPAD*EIPAEI
Trigger: AATTTCAGCAGGAATTTCCCAGTCTGCAGGCAGCTG...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTGTTGTGCAAGCAACTTaGGAGGTGGTGGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFVVQAT*EVVASV
Trigger: CACACTTGCCACCACCTCCCAAGTTGCTTGCACAAC...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCCTGCTCATGTCTTCTTaGTGGCTCTCCATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVLLMSS*WLSIFR
Trigger: CCTGAAGATGGAGAGCCACCAAGAAGACATGAGCAG...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGCTGTGCCTGAGGCCTaGTCATCAAATGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHAVPEA*SSNGPL
Trigger: GAGAGGGCCATTTGATGACCAGGCCTCAGGCACAGC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGAATGGGAACTGGAGCTaGGGTGGAGGCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKNGNWS*GGGRSC
Trigger: GCAGCTCCTGCCTCCACCCCAGCTCCAGTTCCCATT...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTGCTGGAACTGATGGTTaGGATGAGGAAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFAGTDG*DEEEAV
Trigger: CACAGCCTCTTCCTCATCCCAACCATCAGTTCCAGC...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTGTCTGGGTCTGGGTCTaGGTCTGCACTGTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LSVSGLLVSLSTLWVLPPVWVWV*VCTVEA
Trigger: GGCCTCGACAGTGCAGACCCAGACCCAGACCCAGAC...AGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCACTGTGAAGTGGGCATaGACTTCCCAGCGGCTACGA +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVTVKWA*TSQRLR
Trigger: TCGTAGCCGCTGGGAAGTCCATGCCCACTTCACAGT...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTACTGTGAAGTGGGCATaGACTTCCCAGCGGCTACGA +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAATVKWA*TSQRLR
Trigger: TCGTAGCCGCTGGGAAGTCCATGCCCACTTCACAGT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGTAATTAGCAGTGCTTaGTCCACTGGCACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSVISSA*STGTAA
Trigger: AGCAGCAGTGCCAGTGGACCAAGCACTGCTAATTAC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCAGCCCCCAAACTCAGCTaGGCTTGGTGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASAPKLS*AWCCPC
Trigger: GCAAGGGCAGCACCAAGCCCAGCTGAGTTTGGGGGC...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGACAGCTGGGAAGTTGTaGATAGCTGTACCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALTAGKL*IAVPER
Trigger: CCTCTCTGGTACAGCTATCCACAACTTCCCAGCTGT...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCACAGCTGGGAAGTTGTaGATAGCTGTACCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSTAGKL*IAVPER
Trigger: CCTCTCTGGTACAGCTATCCACAACTTCCCAGCTGT...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCTGCTGGAGAGCACTaGGGGATTGGGCAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCPAGEH*GIGQCY
Trigger: ATAACACTGCCCAATCCCCCAGTGCTCTCCAGCAGG...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCCTGCTGGAGAGCACTaGGGGATTGGGCAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAPAGEH*GIGQCY
Trigger: ATAACACTGCCCAATCCCCCAGTGCTCTCCAGCAGG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGAAGGTGTTAGTATGTaGGGCTCTTACCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTEGVSM*GSYQWR
Trigger: CCTCCATTGGTAAGAGCCCCACATACTAACACCTTC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGAGGAGGCATCTGACTaGCCAGTGCCATTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPEEASD*PVPLVA
Trigger: GGCCACCAATGGCACTGGCCAGTCAGATGCCTCCTC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTATAGGACTGCATCATaGGCCACCTTGGGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVYRTAS*ATLGQN
Trigger: GTTTTGACCCAAGGTGGCTCATGATGCAGTCCTATA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGGAATCATTCCAGGATaGATGGGTGGAATGTCCATA +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTGIIPG*MGGMSI
Trigger: TATGGACATTCCACCCATTCATCCTGGAATGATTCC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTCTTCCCACCTTTTaGTGGTGGGCCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALSLPTF*WWAISS
Trigger: AGAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGA...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGGCTGTGACTGGAGATaGAGTGGATGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHGCDWR*SGCWNR
Trigger: CCTGTTCCAGCATCCACTTCATCTCCAGTCACAGCC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTGGCACAGCTGTAGCTaGGACCACTGGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPWHSCS*DHWGWR
Trigger: TCTCCAACCCCAGTGGTCTCAGCTACAGCTGTGCCA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAGCTTATTCCACGCACTaGCTGAAGGTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPAYSTH*LKVAVV
Trigger: CACCACAGCCACCTTCAGTCAGTGCGTGGAATAAGC...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGCCGGAGCACCAAACTaGATTGTGTCAATTCCAATT +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTAGAPN*IVSIPI
Trigger: AATTGGAATTGACACAATTCAGTTTGGTGCTCCGGC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTCATACAGCTCAACTGTaGAAAGTGACTTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTHTAQL*KVTCRR
Trigger: CCTTCTGCAAGTCACTTTTCACAGTTGAGCTGTATG...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGCTGCTGCTGTGCAATaGGGGAAGGCATACAGCTCA +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPAAAVQ*GKAYSS
Trigger: TGAGCTGTATGCCTTCCCTCATTGCACAGCAGCAGC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTGGAAGCCCTGCTGCTaGGCCAGGGATGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACWKPCC*ARDGGA
Trigger: GGCTCCACCATCCCTGGCTCAGCAGCAGGGCTTCCA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGGGATTGGAATCTGCTaGACTGATGTCGGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHGIGIC*TDVGCE
Trigger: CTCGCAGCCGACATCAGTTCAGCAGATTCCAATCCC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCAGGACGGCTCAAACTCTaGGCCTGTGCTTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASGRLKL*ACACGV
Trigger: GACCCCACAAGCACAGGCTCAGAGTTTGAGCCGTCC...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGAGGTGTTCCTGGTTTaGTATCAATGCCACTCCCAA +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSEVFLV*YQCHSQ
Trigger: TTGGGAGTGGCATTGATATCAAACCAGGAACACCTC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACACTGTGGCGGGGGCTaGCTGGAACTGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQHCGGG*LELFLI
Trigger: TATCAGAAACAGTTCCAGTCAGCCCCCGCCACAGTG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAGGGCCTGATTACCTCTaGCTCCAGACAGTGATCCAC +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPGPDYL*LQTVIH
Trigger: GTGGATCACTGTCTGGAGTCAGAGGTAATCAGGCCC...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGAACCGCTGCGTGGACTaGAGAACCTCTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVNRCVD*RTSALC
Trigger: GCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGGTT...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTGGATTCCATCTCCTTaGCCACCTTGCTTGTTACTG +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVWIPSP*PPCLLL
Trigger: CAGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTTCTGGAGGTGGGGGATaGTGTTGTGCAAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCSGGGG*CCASNL
Trigger: CAAGTTGCTTGCACAACAGCATCCCCCACCTCCAGA...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTTGGAGGTCGTTTATCTaGCGGTATAGGCATAAACTG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTWRSFI*RYRHKL
Trigger: CAGTTTATGCCTATACCGGCAGATAAACGACCTCCA...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCGAGGTGGCTTATCTTaGCTTGGTGGTCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHRGGLS*LGGRVG
Trigger: ACCTACCCGACCACCAAGGCAAGATAAGCCACCTCG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCATACCTGTACGACTTaGTCTTCCTTCTTTCGGCGT +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSHTCTT*SSFFRR
Trigger: ACGCCGAAAGAAGGAAGAGCAAGTCGTACAGGTATG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTATCGAGGGTGGTGGCTaGTTTGAAGATGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAIEGGG*FEDGAE
Trigger: TTCAGCGCCATCTTCAAAGCAGCCACCACCCTCGAT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTGACGCAACTGGGATCTaGGGCATTGATGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCDATGI*GIDALE
Trigger: TTCCAGTGCATCAATGCCGCAGATCCCAGTTGCGTC...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTGCTCTGCTGCTGCTGTaGAATGAGGGAAGGCATACA +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCALLLL*NEGRHT
Trigger: TGTATGCCTTCCCTCATTGCACAGCAGCAGCAGAGC...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCAAACTCTGAGCCTGTaGTTGTGGGGTCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHQTLSL*LWGRVL
Trigger: CAGCACACGACCCCACAAGCACAGGCTCAGAGTTTG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACAAACTCTGAGCCTGTaGTTGTGGGGTCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQQTLSL*LWGRVL
Trigger: CAGCACACGACCCCACAAGCACAGGCTCAGAGTTTG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGAAACGGCTGTGCCATaGGCACTGTGGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACETAVP*ALWRGL
Trigger: CAGCCCCCGCCACAGTGCGCATGGCACAGCCGTTTC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGCTGGGGTGCAAACTGTaGAGGAAACGGCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLLGCKL*RKRLCH
Trigger: ATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAG...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACATCTGACTGGCCAGTaGCATTGGTGGCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQHLTGQ*HWWPLY
Trigger: GTACAGAGGCCACCAATGGCACTGGCCAGTCAGATG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTGCACTAAGGATGGATaGGCGTTCAGGTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFCTKDG*AFRFRS
Trigger: GCTTCTGAACCTGAACGCCCATCCATCCTTAGTGCA...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCAGGTCTTCTTAAGGTaGCAGGACGTGATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPQVFLR*QDVMAG
Trigger: GCCGGCCATCACGTCCTGCCACCTTAAGAAGACCTG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCGGCACACCTTCTTGGTaGTGTGCAGAGTTACCACTG +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVGTPSW*CAELPL
Trigger: CAGTGGTAACTCTGCACACCACCAAGAAGGTGTGCC...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAAACTGGCGCGGAGGGTaGAGCTTGGATTTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPNWRGG*SLDLLS
Trigger: ACTCAGCAAATCCAAGCTCCACCCTCCGCGCCAGTT...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTGGAAGTGGACTCTaGACTGGTTTGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLGGSGL*TGLWVW
Trigger: CCAGACCCACAAACCAGTCCAGAGTCCACTTCCACC...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATACTGTGAAGTGGGCATaGACTTCCCAGCGGCTACGA +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHTVKWA*TSQRLR
Trigger: TCGTAGCCGCTGGGAAGTCCATGCCCACTTCACAGT...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGCATGGGACTGTGAAGTaGGCATGGACTTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVHGTVK*AWTSQR
Trigger: CCGCTGGGAAGTCCATGCCCACTTCACAGTCCCATG...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTCTGGCTCGACCTGCTaGGCATCTTTCACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVSGSTC*ASFTFL
Trigger: TAGAAAAGTGAAAGATGCCCAGCAGGTCGAGCCAGA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTGGCTCGACCTGCTaGGCATCTTTCACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALSGSTC*ASFTFL
Trigger: TAGAAAAGTGAAAGATGCCCAGCAGGTCGAGCCAGA...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGCTTCTGACCACAGCTaGGCTGGGTTTCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQASDHS*AGFLLS
Trigger: GGACAAGAGAAACCCAGCCCAGCTGTGGTCAGAAGC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTAGGACCACGGAAGGCTaGGAAAGACTGCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAARTTEG*ERLLCI
Trigger: TATGCAGAGCAGTCTTTCCCAGCCTTCCGTGGTCCT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCCTGGTGCTGGACAGCTaGGAAGTTGTGGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVLVLDS*EVVDSC
Trigger: ACAGCTATCCACAACTTCCCAGCTGTCCAGCACCAG...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTAAAGGCTGGCTTACTTaGGCAGGACGGCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCKGWLT*AGRLKL
Trigger: GAGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTT...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGCTTCGACCACCAATTaGAGGTGTTCCTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALASTTN*RCSWFD
Trigger: ATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTGTGGCAAACGAGCATaGCTCATGAGGCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHCGKRA*LMRPVV
Trigger: GACCACAGGCCTCATGAGCCATGCTCGTTTGCCACA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACTTGTTACTGGCCCATaGTTTGGGAGCAGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQLVTGP*FGSRCY
Trigger: GTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCTGATCAGAGGAAGGTaGCCCAGCAGACTTACCACC +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLIRGR*PSRLTT
Trigger: GGTGGTAAGTCTGCTGGGTCACCTTCCTCTGATCAG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCATCATAGCTCTATACTaGGAAGCAAGTGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSIIALY*EASAGC
Trigger: GCAACCTGCACTTGCTTCTCAGTATAGAGCTATGAT...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTGGTGTTTTTGCAGTTTaGTCCTCACTGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFGVFAV*SSLLLS
Trigger: AGAGAGCAGCAGTGAGGATCAAACTGCAAAAACACC...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGGAATCATTCCAGGATaGATGGGTGGAATGTCCATA +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVGIIPG*MGGMSI
Trigger: TATGGACATTCCACCCATTCATCCTGGAATGATTCC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGAGCATGATAGGGATCTaGCCCCCACATCATTCGAGG +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLSMIGI*PPHHSR
Trigger: CCTCGAATGATGTGGGGGTCAGATCCCTATCATGCT...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGCATGGTTAGATCCATaGGAAACACTTCTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTAWLDP*ETLLFR
Trigger: CCGAAAAAGAAGTGTTTCTCATGGATCTAACCATGC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTTCAACTCCAGGTCTCTaGCTAGAAAAACTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTSTPGL*LEKLLF
Trigger: GAAGAGAAGTTTTTCTAGTCAGAGACCTGGAGTTGA...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTATTGAGGTCAAACTGTaGCAGAGCATCTACTTTCTC +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTIEVKL*QSIYFL
Trigger: GAGAAAGTAGATGCTCTGTCACAGTTTGACCTCAAT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTCACTTGCGTAATTATTaGGGTCAAACTGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTHLRNY*GQTVTE
Trigger: CTCTGTCACAGTTTGACCTCAATAATTACGCAAGTG...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGCCGGAGCACCAAACTaGATTGTGTCAATTCCAATT +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALAGAPN*IVSIPI
Trigger: AATTGGAATTGACACAATTCAGTTTGGTGCTCCGGC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCACAGGATCAGTGCTTCTaGCCACAGCTGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASQDQCF*PQLGWV
Trigger: AACCCAGCCCAGCTGTGGTCAGAAGCACTGATCCTG...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCATACAGCTCAACTGTaGAAAGTGACTTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSHTAQL*KVTCRR
Trigger: CCTTCTGCAAGTCACTTTTCACAGTTGAGCTGTATG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACTGGAAGCCCTGCTGCTaGGCCAGGGATGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYWKPCC*ARDGGA
Trigger: GGCTCCACCATCCCTGGCTCAGCAGCAGGGCTTCCA...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGGATTTGAAGTCTGCTaGAAGGCAAGACCTGATTGT +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALGFEVC*KARPDC
Trigger: ACAATCAGGTCTTGCCTTTCAGCAGACTTCAAATCC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCACATCCTTGGCTTTTGTaGTCTGGCCTGACTTCTCCG +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPHPWLL*SGLTSP
Trigger: CGGAGAAGTCAGGCCAGAGCACAAAAGCCAAGGATG...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTTGCTCTTGTTTCGATaGCCATCCTGTCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALLLLFR*PSCPIF
Trigger: AAAGATGGGACAGGATGGGCATCGAAACAAGAGCAA...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTTCTCCTTGCCCACCTTaGTTGTTACTGGCCCATGAT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAASPCPP*LLLAHD
Trigger: ATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGA...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCATACTGAGAAGCAAGTaGAGGTTGCTGTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSILRSK*RLLSIQ
Trigger: CTGAATGGACAGCAACCTGCACTTGCTTCTCAGTAT...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCTCCTCTGGAGATGGCTaGTTTTCTATGATCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVSSGDG*FSMIPS
Trigger: GCTCGGGATCATAGAAAAGCAGCCATCTCCAGAGGA...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATGCTGCTGCCACTGTTaGTGTTTCATCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQCCCHC*CFICSC
Trigger: GCAGGAGCAGATGAAACAGCAACAGTGGCAGCAGCA...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGGTGCTGCAACGCTTTaGTGGTTTACAGTTTTAACT +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTGAATL*WFTVLT
Trigger: AGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGGATACTCACGAGTGTaGCCTCTACCACCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKGYSRV*PLPPLP
Trigger: TGGCAGAGGTGGTAGAGGGCACACTCGTGAGTATCC...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGGATACTCACGAGTGTaGCCTCTACCACCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVGYSRV*PLPPLP
Trigger: TGGCAGAGGTGGTAGAGGGCACACTCGTGAGTATCC...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGCGAGGTGGCTTATCTTaGCTTGGTGGTCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVRGGLS*LGGRVG
Trigger: ACCTACCCGACCACCAAGGCAAGATAAGCCACCTCG...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGCGAGGTGGCTTATCTTaGCTTGGTGGTCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKRGGLS*LGGRVG
Trigger: ACCTACCCGACCACCAAGGCAAGATAAGCCACCTCG...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGGCTGCTTCTGCCGCTaGTCTTTAGGTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHGCFCR*SLGSGT
Trigger: AGTTCCTGAACCTAAAGAGCAGCGGCAGAAGCAGCC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCCCTTCTGGCTCGACCTaGTGGGCATCTTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVPSGST*WASFTF
Trigger: AAAAGTGAAAGATGCCCAGCAGGTCGAGCCAGAAGG...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTGTTACAGACTCCTTTaGATCAGAGCCATACTCTGC +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVCYRLL*IRAILC
Trigger: GCAGAGTATGGCTCTGATGCAAAGGAGTCTGTAACA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGACGCAACTGGGATCTaGGGCATTGATGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHDATGI*GIDALE
Trigger: TTCCAGTGCATCAATGCCGCAGATCCCAGTTGCGTC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGACGCAACTGGGATCTaGGGCATTGATGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQDATGI*GIDALE
Trigger: TTCCAGTGCATCAATGCCGCAGATCCCAGTTGCGTC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCGGCTGGGATTTGAGCTaGTGCAGACTGAGACACATA +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVGWDLS*CRLRHI
Trigger: TATGTGTCTCAGTCTGCAGCAGCTCAAATCCCAGCC...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGGCTGGGATTTGAGCTaGTGCAGACTGAGACACATA +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAGWDLS*CRLRHI
Trigger: TATGTGTCTCAGTCTGCAGCAGCTCAAATCCCAGCC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCTGGGAAAGACTGCTCTaGATAAAGGCTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVWERLL*IKAGCD
Trigger: ATCGCAGCCAGCCTTTATGCAGAGCAGTCTTTCCCA...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGTTGGCAAGTTCCTGGTaGTGGACAGCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLLASSW*WTAGKL
Trigger: CAACTTCCCAGCTGTCCAGCACCAGGAACTTGCCAA...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTGGCAAGTTCCTGGTaGTGGACAGCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPLASSW*WTAGKL
Trigger: CAACTTCCCAGCTGTCCAGCACCAGGAACTTGCCAA...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTTGGCAAGTTCCTGGTaGTGGACAGCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHLASSW*WTAGKL
Trigger: CAACTTCCCAGCTGTCCAGCACCAGGAACTTGCCAA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGAAACGGCTGTGCCATaGGCACTGTGGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEETAVP*ALWRGL
Trigger: CAGCCCCCGCCACAGTGCGCATGGCACAGCCGTTTC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGAGAACCTCTGCTCTCTaGTTTGCCTTCAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALRTSAL*FAFRSC
Trigger: ACAAGATCTGAAGGCAAAGCAGAGAGCAGAGGTTCT...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCATTCAGTTTGGCCTGTaGAGGACCACAAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSIQFGL*RTTSYS
Trigger: AGAATAGCTTGTGGTCCTCCACAGGCCAAACTGAAT...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTAAGGTGGGAACCTCATaGGACCATGTAGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAKVGTS*DHVEED
Trigger: ATCCTCCTCTACATGGTCCCATGAGGTTCCCACCTT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGTTGTGCAAGCAACTTaGGAGGTGGTGGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHVVQAT*EVVASV
Trigger: CACACTTGCCACCACCTCCCAAGTTGCTTGCACAAC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTAGGGTGGGGTTGCATTaGCTGGTAAAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPRVGLH*LVKGSV
Trigger: CACAGACCCCTTTACCAGCCAATGCAACCCCACCCT...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCTTCTTCTCTTCTGTTaGAGCTTGGTCTTGGACCCC +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCLLLFC*SLVLDP
Trigger: GGGGTCCAAGACCAAGCTCCAACAGAAGAGAAGAAG...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTTCTGTCGCCTTCTTTTaGGAACAACCTCAAAATCAG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTSVAFF*EQPQNQ
Trigger: CTGATTTTGAGGTTGTTCCCAAAAGAAGGCGACAGA...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCCCGTCTAAATCGAGGTaGCTTATCTTGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVPSKSR*LILPWW
Trigger: CCACCAAGGCAAGATAAGCCACCTCGATTTAGACGG...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGGCCTGGTCATCAAATaGCCCTCTCTTCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPGLVIK*PSLPTF
Trigger: AAAGGTGGGAAGAGAGGGCCATTTGATGACCAGGCC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCTGGAACTAGAGCGGTaGCTGATGCCAAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCLELER*LMPKWE
Trigger: TTCCCATTTTGGCATCAGCCACCGCTCTAGTTCCAG...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGCTGGAACTGATGGTTaGGATGAGGAAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHAGTDG*DEEEAV
Trigger: CACAGCCTCTTCCTCATCCCAACCATCAGTTCCAGC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGCTGGAACTGATGGTTaGGATGAGGAAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPAGTDG*DEEEAV
Trigger: CACAGCCTCTTCCTCATCCCAACCATCAGTTCCAGC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGGTGGAAGTGGACTCTaGACTGGTTTGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPGGSGL*TGLWVW
Trigger: CCAGACCCACAAACCAGTCCAGAGTCCACTTCCACC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATTTCTCTTGTCCTTCTaGCTCGACCTGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPFLLSF*LDLLGI
Trigger: GATGCCCAGCAGGTCGAGCCAGAAGGACAAGAGAAA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTTCTCTTGTCCTTCTaGCTCGACCTGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPFLLSF*LDLLGI
Trigger: GATGCCCAGCAGGTCGAGCCAGAAGGACAAGAGAAA...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGAGAAGAGGAAGGTGTaGTGTAGTCTGTTACAGACT +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALEKRKV*CSLLQT
Trigger: AGTCTGTAACAGACTACACCACACCTTCCTCTTCTC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGATCCATATAGAAGGCTaGGATTTGAGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALIHIEG*DLSCCR
Trigger: TCTGCAGCAGCTCAAATCCCAGCCTTCTATATGGAT...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCACAGCTGGGAAGTTGTaGATAGCTGTACCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVTAGKL*IAVPER
Trigger: CCTCTCTGGTACAGCTATCCACAACTTCCCAGCTGT...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGCTGGTGCTGGACAGCTaGGAAGTTGTGGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLLVLDS*EVVDSC
Trigger: ACAGCTATCCACAACTTCCCAGCTGTCCAGCACCAG...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACTGGTGCTGGACAGCTaGGAAGTTGTGGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQLVLDS*EVVDSC
Trigger: ACAGCTATCCACAACTTCCCAGCTGTCCAGCACCAG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAAAAGGCTGGCTTACTTaGGCAGGACGGCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPKGWLT*AGRLKL
Trigger: GAGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTT...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACCTCTGTACAGGCGCTaGGAAGGTGTTAGTATGTGG +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQPLYRR*EGVSMW
Trigger: CCACATACTAACACCTTCCCAGCGCCTGTACAGAGG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATATCCACAAGGACCCCTaGCTACATGTGGCAAACGAG +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHIHKDP*LHVANE
Trigger: CTCGTTTGCCACATGTAGCCAGGGGTCCTTGTGGAT...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGAAGAACCGCTGCGTaGACTGAAGAACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPRRTAA*TEEPLL
Trigger: GAGCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCT...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTGGACCAAATGTCTTGTaGCTGAGTCCTCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCGPNVL*LSPLPT
Trigger: TGTGGGAAGAGGACTCAGCCACAAGACATTTGGTCC...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCCCACAGCTCTCTTCTaGGGTGCAAACTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPPTALF*GANCAG
Trigger: TCCTGCACAGTTTGCACCCCAGAAGAGAGCTGTGGG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
3UTR CAA 72 bp AGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTaGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTA +
Preference number: 4 (lower is better)
Translates to: RCQEGHSAFQGY*YHCPLSGFCLL
Trigger: TAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATGGGGGCATTCGCCGTaGAATACCAACTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQWGHSP*NTNFSK
Trigger: CTTGGAAAAGTTGGTATTTCACGGCGAATGCCCCCA...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCATAGCAGGCCTTCCTaGTATCATTCGAGGATCCAT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAHSRPS*YHSRIH
Trigger: ATGGATCCTCGAATGATATCAGGAAGGCCTGCTATG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCGAGGTTCAGAAAGTaGAATTCCATGATCTCTTGC +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSSRFRK*NSMISC
Trigger: GCAAGAGATCATGGAATTTCACTTTCTGAACCTCGA...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTCGAGGTTCAGAAAGTaGAATTCCATGATCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVSRFRK*NSMISC
Trigger: GCAAGAGATCATGGAATTTCACTTTCTGAACCTCGA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTCAACTCCAGGTCTCTaGCTAGAAAAACTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVSTPGL*LEKLLF
Trigger: GAAGAGAAGTTTTTCTAGTCAGAGACCTGGAGTTGA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCTCTCTTCCCACCTTTTaGTGGTGGGCCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVSLPTF*WWAISS
Trigger: AGAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGA...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGACAGTGGATGCAGCTaGGGCTGGGGCAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEDSGCS*GWGKGN
Trigger: GTTCCCCTTGCCCCAGCCTCAGCTGCATCCACTGTC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCTCTGCAGAGGAGACTaGGATCATCGCCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLCRGD*DHRPNF
Trigger: GAAATTGGGGCGATGATCTCAGTCTCCTCTGCAGAG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGTGCTGTAGGAGTGACTaGCGCAACTGGGATCTGCGG +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWCCRSD*RNWDLR
Trigger: CCGCAGATCCCAGTTGCGTCAGTCACTCCTACAGCA...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTCATACAGCTCAACTGTaGAAAGTGACTTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFHTAQL*KVTCRR
Trigger: CCTTCTGCAAGTCACTTTTCACAGTTGAGCTGTATG...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCTGAAAGGCAAGACCTaGTTGTGCCTTGGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHLKGKT*LCLGKF
Trigger: GAACTTGCCAAGGCACAATCAGGTCTTGCCTTTCAG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGAACCGCTGCGTGGACTaGAGAACCTCTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWNRCVD*RTSALC
Trigger: GCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGGTT...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTTGCTCTTGTTTCGATaGCCATCCTGTCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFLLLFR*PSCPIF
Trigger: AAAGATGGGACAGGATGGGCATCGAAACAAGAGCAA...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGTACTTCTGGGGGAGCTaGAACCCCAGGTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWYFWGS*NPRFGL
Trigger: CAGCCCAAACCTGGGGTTGCAGCTCCCCCAGAAGTA...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGTCTGGAGGTGGGGGATaGTGTTGTGCAAGCAACTTG +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVSGGGG*CCASNL
Trigger: CAAGTTGCTTGCACAACAGCATCCCCCACCTCCAGA...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTACGAGCACGCTCTACTaGTGCAGATATTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCTSTLY*CRYFRL
Trigger: CAGTCTGAAATATCTGCAGCAGTAGAGCGTGCTCGT...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR GCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTACGAGCACGCTCTACTaGTGCAGATATTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAATSTLY*CRYFRL
Trigger: CAGTCTGAAATATCTGCAGCAGTAGAGCGTGCTCGT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTCCTCTGGAGATGGCTaGTTTTCTATGATCCCGAGC +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHSSGDG*FSMIPS
Trigger: GCTCGGGATCATAGAAAAGCAGCCATCTCCAGAGGA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTCTAACTCTTTCTCTTaGTGTCTTGCCCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVSNSFS*CLALSI
Trigger: AATGGAGAGGGCAAGACAGCAAGAGAAAGAGTTAGA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGGTCGGGTAGGTCGCTaGCTTCGGGGCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEGRVGR*LRGLSL
Trigger: TAGAGAGAGGCCCCGAAGGCAGCGACCTACCCGACC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTGGAATTCTTCTGTCCTaGACCATTAGGCACACCTTC +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCGILLS*TIRHTF
Trigger: GAAGGTGTGCCTAATGGTGCAGGACAGAAGAATTCC...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGATCGAGGGTGGTGGCTaGTTTGAAGATGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVIEGGG*FEDGAE
Trigger: TTCAGCGCCATCTTCAAAGCAGCCACCACCCTCGAT...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGGCTGCTTCTGCCGCTaGTCTTTAGGTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPGCFCR*SLGSGT
Trigger: AGTTCCTGAACCTAAAGAGCAGCGGCAGAAGCAGCC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGCCTTCTGGCTCGACCTaGTGGGCATCTTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLPSGST*WASFTF
Trigger: AAAAGTGAAAGATGCCCAGCAGGTCGAGCCAGAAGG...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACCTTCTGGCTCGACCTaGTGGGCATCTTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPPSGST*WASFTF
Trigger: AAAAGTGAAAGATGCCCAGCAGGTCGAGCCAGAAGG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTCTGCTGCTGCTGTaGAATGAGGGAAGGCATACA +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVALLLL*NEGRHT
Trigger: TGTATGCCTTCCCTCATTGCACAGCAGCAGCAGAGC...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGGCTGGGATTTGAGCTaGTGCAGACTGAGACACATA +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPGWDLS*CRLRHI
Trigger: TATGTGTCTCAGTCTGCAGCAGCTCAAATCCCAGCC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGGCTTGAGTAAGATTTaGTCTTGCCTGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVGLSKI*SCLKKM
Trigger: CATCTTCTTCAGGCAAGAGCAAATCTTACTCAAGCC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGTCGCCATCATGCTATaGTGTGTTCCAGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHVAIML*CVPAGI
Trigger: AATCCCTGCTGGAACACAGCATAGCATGATGGCGAC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGTCGCCATCATGCTATaGTGTGTTCCAGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPVAIML*CVPAGI
Trigger: AATCCCTGCTGGAACACAGCATAGCATGATGGCGAC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGCTGTGGTCGCCATCATaGTATGCTGTGTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVLWSPS*YAVFQQ
Trigger: CTGCTGGAACACAGCATAGCATGATGGCGACCACAG...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCCAGCTGCCTGCAGACTaGGAAATTCCTGCTGAAATT +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVQLPAD*EIPAEI
Trigger: AATTTCAGCAGGAATTTCCCAGTCTGCAGGCAGCTG...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGCTGTCCATTCAGTTTaGCCTGTGGAGGACCACAAG +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPAVHSV*PVEDHK
Trigger: CTTGTGGTCCTCCACAGGCCAAACTGAATGGACAGC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAAAGGTGGGAACCTCATaGGACCATGTAGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPKVGTS*DHVEED
Trigger: ATCCTCCTCTACATGGTCCCATGAGGTTCCCACCTT...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTAGGACTTTTTGTGACTaGAGGCTGAGCAGGTATCTG +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAARTFCD*RLSRYL
Trigger: CAGATACCTGCTCAGCCTCCAGTCACAAAAAGTCCT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTCTTGTACCACTTGTGTaGTCTCCTTTTCACTGCGAT +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFLVPLV*SPFHCD
Trigger: ATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAG...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAGGTGACCCTTCCATCTaGTCTCTTCTGATTAACGGC +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPGDPSI*SLLING
Trigger: GCCGTTAATCAGAAGAGACCAGATGGAAGGGTCACC...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGTCTTCTGTTGGAGCTTaGTCTTGGACCCCACCGAGT +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVSSVGA*SWTPPS
Trigger: ACTCGGTGGGGTCCAAGACCAAGCTCCAACAGAAGA...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACGGCCTCTGTATCCTTaGTCTGGAAACCAATCCCTA +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQRPLYP*SGNQSL
Trigger: TAGGGATTGGTTTCCAGACCAAGGATACAGAGGCCG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGCTGCTCATGTCTTCTTaGTGGCTCTCCATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLLLMSS*WLSIFR
Trigger: CCTGAAGATGGAGAGCCACCAAGAAGACATGAGCAG...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTTTTCGCTCAAATTTTaGAGGTCGTTTATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVFSLKF*RSFICR
Trigger: CCGGCAGATAAACGACCTCCAAAATTTGAGCGAAAA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGGCCTGGTCATCAAATaGCCCTCTCTTCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPGLVIK*PSLPTF
Trigger: AAAGGTGGGAAGAGAGGGCCATTTGATGACCAGGCC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGGCACACCTTCTTGGTaGTGTGCAGAGTTACCACTG +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPGTPSW*CAELPL
Trigger: CAGTGGTAACTCTGCACACCACCAAGAAGGTGTGCC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTAATGGGAACTGGAGCTaGGGTGGAGGCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACNGNWS*GGGRSC
Trigger: GCAGCTCCTGCCTCCACCCCAGCTCCAGTTCCCATT...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCCGGGGGTGGGACAGTaGATGCAGCTGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRPGVGQ*MQLRLG
Trigger: CCCCAGCCTCAGCTGCATCCACTGTCCCACCCCCGG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGCTGTTAGAGAGCCATaGGACTGTGAAGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPAVREP*DCEVGM
Trigger: CATGCCCACTTCACAGTCCCATGGCTCTCTAACAGC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTTACCAGACTCAAGTCTaGAAGCTTCTGAGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTYQTQV*KLLSFN
Trigger: ATTAAAGCTCAGAAGCTTCCAGACTTGAGTCTGGTA...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGTTTCTCTTGTCCTTCTaGCTCGACCTGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVFLLSF*LDLLGI
Trigger: GATGCCCAGCAGGTCGAGCCAGAAGGACAAGAGAAA...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTTTTCGGAGACTGCTTTaGTTTCTTTTGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTFRRLL*FLLLFQ
Trigger: CTGAAACAGCAAAAGAAACCAAAGCAGTCTCCGAAA...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGTAATTAGCAGTGCTTaGTCCACTGGCACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLVISSA*STGTAA
Trigger: AGCAGCAGTGCCAGTGGACCAAGCACTGCTAATTAC...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTATCCATATAGAAGGCTaGGATTTGAGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFIHIEG*DLSCCR
Trigger: TCTGCAGCAGCTCAAATCCCAGCCTTCTATATGGAT...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTAGGACCACGGAAGGCTaGGAAAGACTGCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPRTTEG*ERLLCI
Trigger: TATGCAGAGCAGTCTTTCCCAGCCTTCCGTGGTCCT...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAAGTTGCTTTTCATCCTaGTCAGAGGAAGGTGACCCA +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQSCFSS*SEEGDP
Trigger: TGGGTCACCTTCCTCTGATCAGGATGAAAAGCAACT...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTGCTCATCATCATCACTaGAGTTCAGCTGTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCAHHHH*SSAVLC
Trigger: ACACAGAACAGCTGAACTTCAGTGATGATGATGAGC...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR TCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGGTGTTTTTGCAGTTTaGTCCTCACTGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHGVFAV*SSLLLS
Trigger: AGAGAGCAGCAGTGAGGATCAAACTGCAAAAACACC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTAAATCGTGGTGGCAATaGTTTCTGAAACTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTKSWWQ*FLKLFE
Trigger: TTCAAACAGTTTCAGAAATCATTGCCACCACGATTT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGACCATTAGACGGCTGTaGGGGCACAGTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWTIRRL*GHSLWK
Trigger: CTTCCACAGACTGTGCCCTCACAGCCGTCTAATGGT...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCTCAGAGCTATTAGGTaGCCCTTCCATCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLRAIR*PFHLVS
Trigger: AGAGACCAGATGGAAGGGTCACCTAATAGCTCTGAG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGGAGCTTGGATTTGCTaGGTCCCAGTAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPGAWIC*VPVACF
Trigger: AAAACAAGCTACTGGGACTCAGCAAATCCAAGCTCC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGAACAGGAGCCGAGGCTaGGGTTGGAACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCENRSRG*GWNWSW
Trigger: CCAGCTCCAGTTCCAACCTCAGCCTCGGCTCCTGTT...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCTCAACACCACTCTCTTaGCCATTTCTTGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVSTPLS*PFLVPS
Trigger: AGAGGGAACAAGAAATGGTCAAGAGAGTGGTGTTGA...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTGCTGTAGGAGTGACTaGCGCAACTGGGATCTGCGG +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACCCRSD*RNWDLR
Trigger: CCGCAGATCCCAGTTGCGTCAGTCACTCCTACAGCA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTAGATTTTGTACTCAATaGAGAGGTAGTGTAAGTACC +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTRFCTQ*RGSVST
Trigger: GGTACTTACACTACCTCTTCATTGAGTACAAAATCT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGCTCAACTGTGAAAAGTaGCTTGCAGAAGGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLLNCEK*LAEGRL
Trigger: CAGCCTACCTTCTGCAAGTCACTTTTCACAGTTGAG...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACTCAACTGTGAAAAGTaGCTTGCAGAAGGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQLNCEK*LAEGRL
Trigger: CAGCCTACCTTCTGCAAGTCACTTTTCACAGTTGAG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCATACAGCTCAACTGTaGAAAGTGACTTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAHTAQL*KVTCRR
Trigger: CCTTCTGCAAGTCACTTTTCACAGTTGAGCTGTATG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGGAAGCCCTGCTGCTaGGCCAGGGATGGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRWKPCC*ARDGGA
Trigger: GGCTCCACCATCCCTGGCTCAGCAGCAGGGCTTCCA...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGGGATTGGAATCTGCTaGACTGATGTCGGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWGIGIC*TDVGCE
Trigger: CTCGCAGCCGACATCAGTTCAGCAGATTCCAATCCC...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGTTGAATTGAAGAACTaGATAATTCCTGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALVELKN*IIPEPV
Trigger: CACAGGCTCAGGAATTATTCAGTTCTTCAATTCAAC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGTTGAATTGAAGAACTaGATAATTCCTGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVVELKN*IIPEPV
Trigger: CACAGGCTCAGGAATTATTCAGTTCTTCAATTCAAC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCAGATTTGCTCTTGCCTaGAGAAGATGTGTATCAATC +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVRFALA*RRCVSI
Trigger: GATTGATACACATCTTCTTCAGGCAAGAGCAAATCT...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGAGATTTGCTCTTGCCTaGAGAAGATGTGTATCAATC +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALRFALA*RRCVSI
Trigger: GATTGATACACATCTTCTTCAGGCAAGAGCAAATCT...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGGACGGCTCAAACTCTaGGCCTGTGCTTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEGRLKL*ACACGV
Trigger: GACCCCACAAGCACAGGCTCAGAGTTTGAGCCGTCC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGAGGTGTTCCTGGTTTaGTATCAATGCCACTCCCAA +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHEVFLV*YQCHSQ
Trigger: TTGGGAGTGGCATTGATATCAAACCAGGAACACCTC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGAGGTGTTCCTGGTTTaGTATCAATGCCACTCCCAA +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPEVFLV*YQCHSQ
Trigger: TTGGGAGTGGCATTGATATCAAACCAGGAACACCTC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGACTGGAACTGTTTCTaGTACACAACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVDWNCF*YTTLFI
Trigger: AATGAACAGTGTTGTGTATCAGAAACAGTTCCAGTC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCTTGCTCTTGTTTCGATaGCCATCCTGTCCCATCTTT +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVLLLFR*PSCPIF
Trigger: AAAGATGGGACAGGATGGGCATCGAAACAAGAGCAA...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAAGCTTCTCATCCAGCTaGTTCAATTTCTCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQSFSSS*FNFSAH
Trigger: GTGCGCAGAGAAATTGAAGCAGCTGGATGAGAAGCT...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGCTTCTCATCCAGCTaGTTCAATTTCTCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPSFSSS*FNFSAH
Trigger: GTGCGCAGAGAAATTGAAGCAGCTGGATGAGAAGCT...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTAATTCCATGATCTCTTaGAGATCTAGCTATATGCTC +
Preference number: 4 (lower is better)
Translates to: VTPEVRACGASLCSSSVTNSMIS*RSSYML
Trigger: GAGCATATAGCTAGATCTGCAAGAGATCATGGAATT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTTCTTTCTCCTTCCTCTaGTCTCGCTCCTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAASFSFL*SRSSFI
Trigger: TATGAAAGAGGAGCGAGAGCAGAGGAAGGAGAAAGA...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTAGTAATACTCGCCTCTaGCTCGGCCTCTGTATCCTT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPSNTRL*LGLCIL
Trigger: AAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACT...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGCATACCTGTACGACTTaGTCTTCCTTCTTTCGGCGT +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLHTCTT*SSFFRR
Trigger: ACGCCGAAAGAAGGAAGAGCAAGTCGTACAGGTATG...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACATACCTGTACGACTTaGTCTTCCTTCTTTCGGCGT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPHTCTT*SSFFRR
Trigger: ACGCCGAAAGAAGGAAGAGCAAGTCGTACAGGTATG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGCCCGAGGCTGCTTCTaGCGCTGCTCTTTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACARGCF*RCSLGS
Trigger: TGAACCTAAAGAGCAGCGGCAGAAGCAGCCTCGGGC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGCCTTCTGGCTCGACCTaGTGGGCATCTTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVPSGST*WASFTF
Trigger: AAAAGTGAAAGATGCCCAGCAGGTCGAGCCAGAAGG...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTGCTTTGGTTTCTTTTaGTGTTTCAGGATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSCFGFF*CFRISA
Trigger: AGCACTGATCCTGAAACAGCAAAAGAAACCAAAGCA...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTTGGGATTTGAGCTGCTaGAGACTGAGACACATAAAC +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAWDLSC*RLRHIN
Trigger: GTTTATGTGTCTCAGTCTGCAGCAGCTCAAATCCCA...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGTCGCCATCATGCTATaGTGTGTTCCAGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPVAIML*CVPAGI
Trigger: AATCCCTGCTGGAACACAGCATAGCATGATGGCGAC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGCTGCAACCCCAGGTTTaGGCTGTGCTGGTGACACTT +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWLQPQV*AVLVTL
Trigger: AAGTGTCACCAGCACAGCCCAAACCTGGGGTTGCAG...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTACTGGCCCATGATTTaGGAGCAGGTGCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPYWPMI*EQVLLL
Trigger: CAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATTGGAGGGCGTAAACTaGGTCCAGGTCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPLEGVN*VQVHSF
Trigger: AAAACTATGGACCTGGACCCAGTTTACGCCCTCCAA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTGCACTAAGGATGGATaGGCGTTCAGGTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPCTKDG*AFRFRS
Trigger: GCTTCTGAACCTGAACGCCCATCCATCCTTAGTGCA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGATCGTTATCAGGTACTaGAGGCTTGGAGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVIVIRY*RLGGKG
Trigger: CCCTTTCCCTCCAAGCCTCCAGTACCTGATAACGAT...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTACAACAGGCTCTTaGGGTTCAACTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFSTTGS*GSTFSS
Trigger: AGAGGAAAAAGTTGAACCCCAAGAGCCTGTTGTAGA...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGCTGCAACGCTTTGCTaGTTTACAGTTTTAACTACA +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVAATLC*FTVLTT
Trigger: TGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTCAGGTCTTCTTAAGGTaGCAGGACGTGATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACQVFLR*QDVMAG
Trigger: GCCGGCCATCACGTCCTGCCACCTTAAGAAGACCTG...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCTGCTCATGTCTTCTTaGTGGCTCTCCATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLLMSS*WLSIFR
Trigger: CCTGAAGATGGAGAGCCACCAAGAAGACATGAGCAG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGCTGTGCCTGAGGCCTaGTCATCAAATGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACAVPEA*SSNGPL
Trigger: GAGAGGGCCATTTGATGACCAGGCCTCAGGCACAGC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCTGGAACTAGAGCGGTaGCTGATGCCAAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLELER*LMPKWE
Trigger: TTCCCATTTTGGCATCAGCCACCGCTCTAGTTCCAG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGATCGTTCCTTTCCAATaGGACCAGGTTTATGTTCTT +
Preference number: 4 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALIVPFQ*DQVYVL
Trigger: AAGAACATAAACCTGGTCCCATTGGAAAGGAACGAT...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATCTGGCTCGACCTGCTaGGCATCTTTCACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQSGSTC*ASFTFL
Trigger: TAGAAAAGTGAAAGATGCCCAGCAGGTCGAGCCAGA...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCTGGCTCGACCTGCTaGGCATCTTTCACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPSGSTC*ASFTFL
Trigger: TAGAAAAGTGAAAGATGCCCAGCAGGTCGAGCCAGA...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCGAGAAGAGGAAGGTGTaGTGTAGTCTGTTACAGACT +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVEKRKV*CSLLQT
Trigger: AGTCTGTAACAGACTACACCACACCTTCCTCTTCTC...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCATCCATATAGAAGGCTaGGATTTGAGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVIHIEG*DLSCCR
Trigger: TCTGCAGCAGCTCAAATCCCAGCCTTCTATATGGAT...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTATCTGTTTCTGAGCCAGGGATGGTaGAGCCAATCGCGCATGCTG +
Preference number: 4 (lower is better)
Translates to: FRVTCITVHSLGFASYLFLSQGW*SQSRML
Trigger: CAGCATGCGCGATTGGCTCCACCATCCCTGGCTCAG...AAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTCACTGTCCACTCTCTaGGTTTTGCCTCCTATCTGT +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHSLSTL*VLPPIC
Trigger: ACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAGCTCATCATCATCACTaGAGTTCAGCTGTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPAHHHH*SSAVLC
Trigger: ACACAGAACAGCTGAACTTCAGTGATGATGATGAGC...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGTATAGGACTGCATCATaGGCCACCTTGGGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVYRTAS*ATLGQN
Trigger: GTTTTGACCCAAGGTGGCTCATGATGCAGTCCTATA...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGCATAGCAGGCCTTCCTaGTATCATTCGAGGATCCAT +
Preference number: 4 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKHSRPS*YHSRIH
Trigger: ATGGATCCTCGAATGATATCAGGAAGGCCTGCTATG...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTCAAAACAAGCAGACTaGGTATTTGTATCAACATGG +
Preference number: 4 (lower is better)
Translates to: NVTPEVRACGASLCSSSVSKQAD*VFVSTW
Trigger: CCATGTTGATACAAATACTCAGTCTGCTTGTTTTGA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGCATGGTTAGATCCATaGGAAACACTTCTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAAWLDP*ETLLFR
Trigger: CCGAAAAAGAAGTGTTTCTCATGGATCTAACCATGC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCACCCCACCGAGTTTCTaGTTTAGATTTATAGACTTT +
Preference number: 4 (lower is better)
Translates to: DANVTPEVRACGASLCSSTPPSF*FRFIDF
Trigger: AAAGTCTATAAATCTAAATCAGAAACTCGGTGGGGT...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCACTTGCGTAATTATTaGGGTCAAACTGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAHLRNY*GQTVTE
Trigger: CTCTGTCACAGTTTGACCTCAATAATTACGCAAGTG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTATCATCATTCAGATTTaGCTGGGGGTCTTCAATTAC +
Preference number: 4 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFIIIQI*LGVFNY
Trigger: GTAATTGAAGACCCCCAGTCAAATCTGAATGATGAT...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTGGAAGCTTAGAAGTCTaGCTTCTTCCTTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCGSLEV*LLPFSP
Trigger: AGGTGAAAAAGGAAGAAGTCAGACTTCTAAGCTTCC...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAAACAGGAGCCGAGGCTaGGGTTGGAACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRNRSRG*GWNWSW
Trigger: CCAGCTCCAGTTCCAACCTCAGCCTCGGCTCCTGTT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCGCGCATGCTGCGTATTaGATAAATGACTTGTATCCA +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVAHAAY*INDLYP
Trigger: TGGATACAAGTCATTTATTCAATACGCAGCATGCGC...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGGATTTGAAGTCTGCTaGAAGGCAAGACCTGATTGT +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHGFEVC*KARPDC
Trigger: ACAATCAGGTCTTGCCTTTCAGCAGACTTCAAATCC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGAACCGCTGCGTGGACTaGAGAACCTCTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCENRCVD*RTSALC
Trigger: GCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGGTT...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGTACTTCTGGGGGAGCTaGAACCCCAGGTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEYFWGS*NPRFGL
Trigger: CAGCCCAAACCTGGGGTTGCAGCTCCCCCAGAAGTA...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGGACTAGTACTTCCTTaGTCATCATCATCACTGAAG +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAGLVLP*SSSSLK
Trigger: CTTCAGTGATGATGATGAGCAAGGAAGTACTAGTCC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGCTTTCAGGTGTTTTTaGAGTTTGATCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAAFRCF*SLILTA
Trigger: AGCAGTGAGGATCAAACTGCAAAAACACCTGAAAGC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTAGCTTCTCATCCAGCTaGTTCAATTTCTCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPSFSSS*FNFSAH
Trigger: GTGCGCAGAGAAATTGAAGCAGCTGGATGAGAAGCT...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCACTGCGATTGCTGTCCTaGCTAGTGAAAATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPLRLLS*LVKIGS
Trigger: AGAACCAATTTTCACTAGGCAGGACAGCAATCGCAG...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGTGCTGCTGCCACTGTTaGTGTTTCATCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWCCCHC*CFICSC
Trigger: GCAGGAGCAGATGAAACAGCAACAGTGGCAGCAGCA...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCATGCAGTTTCAGGCCTTaGATCCCCAGTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASCSFRP*IPSFFS
Trigger: GCTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCA...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTCTTTCTCCTTCCTCTaGTCTCGCTCCTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHSFSFL*SRSSFI
Trigger: TATGAAAGAGGAGCGAGAGCAGAGGAAGGAGAAAGA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGGTATAGGCATAAACTaGTCATGTCTTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHGIGIN*SCLLGG
Trigger: GCCACCAAGAAGACATGAGCAGTTTATGCCTATACC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAGGTATAGGCATAAACTaGTCATGTCTTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPGIGIN*SCLLGG
Trigger: GCCACCAAGAAGACATGAGCAGTTTATGCCTATACC...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATGGAGGTCGTTTATCTaGCGGTATAGGCATAAACTG +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQWRSFI*RYRHKL
Trigger: CAGTTTATGCCTATACCGGCAGATAAACGACCTCCA...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGTGGAGGTCGTTTATCTaGCGGTATAGGCATAAACTG +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLWRSFI*RYRHKL
Trigger: CAGTTTATGCCTATACCGGCAGATAAACGACCTCCA...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGGTCGGGTAGGTCGCTaGCTTCGGGGCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRGRVGR*LRGLSL
Trigger: TAGAGAGAGGCCCCGAAGGCAGCGACCTACCCGACC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGGAATTCTTCTGTCCTaGACCATTAGGCACACCTTC +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPGILLS*TIRHTF
Trigger: GAAGGTGTGCCTAATGGTGCAGGACAGAAGAATTCC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATGTTACAGACTCCTTTaGATCAGAGCCATACTCTGC +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPCYRLL*IRAILC
Trigger: GCAGAGTATGGCTCTGATGCAAAGGAGTCTGTAACA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCAGCTCACAATGGGAGGTaGTGTAGAAGTTACTGGGGA +
Preference number: 4 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASAHNGR*CRSYWG
Trigger: TCCCCAGTAACTTCTACAGCACCTCCCATTGTGAGC...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTGGGATTTGAGCTGCTaGAGACTGAGACACATAAAC +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHWDLSC*RLRHIN
Trigger: GTTTATGTGTCTCAGTCTGCAGCAGCTCAAATCCCA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCTCTGCTCTCTGCTTTaGCAACACCTAGGACCAAAT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLCSLL*QHLGPN
Trigger: ATTTGGTCCTAGGTGTTGGCAAAGCAGAGAGCAGAG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTCTGCAACCCCAGGTTTaGGCTGTGCTGGTGACACTT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACLQPQV*AVLVTL
Trigger: AAGTGTCACCAGCACAGCCCAAACCTGGGGTTGCAG...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAAGCAGGTGCTACTTCTaGGGGAGCTGCAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRSRCYF*GSCNPR
Trigger: CCTGGGGTTGCAGCTCCCCCAGAAGTAGCACCTGCT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATAAGTTCCTCTGGAGATaGCTGCTTTTCTATGATCCC +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHKFLWR*LLFYDP
Trigger: GGGATCATAGAAAAGCAGCCATCTCCAGAGGAACTT...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACTTGTACCACTTGTGTaGTCTCCTTTTCACTGCGAT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPLVPLV*SPFHCD
Trigger: ATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCTTGTACCACTTGTGTaGTCTCCTTTTCACTGCGAT +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHLVPLV*SPFHCD
Trigger: ATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTCTTATCTTGCCTTGGTaGTCGGGTAGGTCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACLILPW*SGRSLP
Trigger: AGGCAGCGACCTACCCGACCACCAAGGCAAGATAAG...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCACCGTCTAAATCGAGGTaGCTTATCTTGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASPSKSR*LILPWW
Trigger: CCACCAAGGCAAGATAAGCCACCTCGATTTAGACGG...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGAATTCCTTCCTGATTTaGGTGGGCCATTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVNSFLI*VGHCCH
Trigger: GTGGCAACAATGGCCCACCCAAATCAGGAAGGAATT...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTATCTACTTTCTCCTTTaGCTTCTTAGGACCCGGTTT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAIYFLL*LLRTRF
Trigger: AAACCGGGTCCTAAGAAGCCAAAGGAGAAAGTAGAT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAAATGGGAACTGGAGCTaGGGTGGAGGCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRNGNWS*GGGRSC
Trigger: GCAGCTCCTGCCTCCACCCCAGCTCCAGTTCCCATT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCACTGGAACTAGAGCGGTaGCTGATGCCAAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASLELER*LMPKWE
Trigger: TTCCCATTTTGGCATCAGCCACCGCTCTAGTTCCAG...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCACCGGGGGTGGGACAGTaGATGCAGCTGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAPGVGQ*MQLRLG
Trigger: CCCCAGCCTCAGCTGCATCCACTGTCCCACCCCCGG...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTCCGGGGGTGGGACAGTaGATGCAGCTGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTPGVGQ*MQLRLG
Trigger: CCCCAGCCTCAGCTGCATCCACTGTCCCACCCCCGG...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCGGGGGTGGGACAGTaGATGCAGCTGAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIPGVGQ*MQLRLG
Trigger: CCCCAGCCTCAGCTGCATCCACTGTCCCACCCCCGG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGTCTGGGTCTGGGTCTaGGTCTGCACTGTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRVWVWV*VCTVEA
Trigger: GGCCTCGACAGTGCAGACCCAGACCCAGACCCAGAC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGTGGAAGTGGACTCTaGACTGGTTTGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACGGSGL*TGLWVW
Trigger: CCAGACCCACAAACCAGTCCAGAGTCCACTTCCACC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCATGGGACTGTGAAGTaGGCATGGACTTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEHGTVK*AWTSQR
Trigger: CCGCTGGGAAGTCCATGCCCACTTCACAGTCCCATG...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGCCCCCAAACTCAGCTaGGCTTGGTGCTGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRAPKLS*AWCCPC
Trigger: GCAAGGGCAGCACCAAGCCCAGCTGAGTTTGGGGGC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTAAGGACCACGGAAGGCTaGGAAAGACTGCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: SAFQGYLYHCPLSGFCLLRTTEG*ERLLCI
Trigger: TATGCAGAGCAGTCTTTCCCAGCCTTCCGTGGTCCT...TAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp TCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTACTGGTGCTGGACAGCTaGGAAGTTGTGGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: SAFQGYLYHCPLSGFCLLLVLDS*EVVDSC
Trigger: ACAGCTATCCACAACTTCCCAGCTGTCCAGCACCAG...TAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp TCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTAGACCTGATTGTGCCTTaGCAAGTTCCTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SAFQGYLYHCPLSGFCLLDLIVP*QVPGAG
Trigger: TCCAGCACCAGGAACTTGCCAAGGCACAATCAGGTC...TAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGTGGGGGCATTCGCCGTaGAATACCAACTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWWGHSP*NTNFSK
Trigger: CTTGGAAAAGTTGGTATTTCACGGCGAATGCCCCCA...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTATAGAAGCCAGATGTTaGGGGTGGGGTTGCATTGGC +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACIEARC*GWGCIG
Trigger: GCCAATGCAACCCCACCCTCAACATCTGGCTTCTAT...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGAAAGTGAAATTCCATaGTCTCTTGCAGATCTAGCT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAESEIP*SLADLA
Trigger: AGCTAGATCTGCAAGAGATCATGGAATTTCACTTTC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATTATTGTCTCTATACTaGGGATACTCACGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPLLSLY*GYSRVC
Trigger: GCACACTCGTGAGTATCCTCAGTATAGAGACAATAA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATCAACTCCAGGTCTCTaGCTAGAAAAACTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQSTPGL*LEKLLF
Trigger: GAAGAGAAGTTTTTCTAGTCAGAGACCTGGAGTTGA...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATTGAGGTCAAACTGTaGCAGAGCATCTACTTTCTC +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPIEVKL*QSIYFL
Trigger: GAGAAAGTAGATGCTCTGTCACAGTTTGACCTCAAT...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTATCATCATTCAGATTTaGCTGGGGGTCTTCAATTAC +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAIIIQI*LGVFNY
Trigger: GTAATTGAAGACCCCCAGTCAAATCTGAATGATGAT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGAAGCTTAGAAGTCTaGCTTCTTCCTTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLGSLEV*LLPFSP
Trigger: AGGTGAAAAAGGAAGAAGTCAGACTTCTAAGCTTCC...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGGAAGCTTAGAAGTCTaGCTTCTTCCTTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQGSLEV*LLPFSP
Trigger: AGGTGAAAAAGGAAGAAGTCAGACTTCTAAGCTTCC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGGCTGTGACTGGAGATaGAGTGGATGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEGCDWR*SGCWNR
Trigger: CCTGTTCCAGCATCCACTTCATCTCCAGTCACAGCC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTCAACACCACTCTCTTaGCCATTTCTTGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPSTPLS*PFLVPS
Trigger: AGAGGGAACAAGAAATGGTCAAGAGAGTGGTGTTGA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGATTTTCATTCCCGTTTaGGGCCGGAGCACCAAACTG +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWIFIPV*GRSTKL
Trigger: CAGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAAT...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGACAGGATCAGTGCTTCTaGCCACAGCTGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRQDQCF*PQLGWV
Trigger: AACCCAGCCCAGCTGTGGTCAGAAGCACTGATCCTG...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTCTCTGCAGAGGAGACTaGGATCATCGCCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACLCRGD*DHRPNF
Trigger: GAAATTGGGGCGATGATCTCAGTCTCCTCTGCAGAG...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTCTCAACTGTGAAAAGTaGCTTGCAGAAGGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSVSGLLVSLSTLWVLPPLNCEK*LAEGRL
Trigger: CAGCCTACCTTCTGCAAGTCACTTTTCACAGTTGAG...AGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGCGCATGCTGCGTATTaGATAAATGACTTGTATCCA +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLAHAAY*INDLYP
Trigger: TGGATACAAGTCATTTATTCAATACGCAGCATGCGC...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGCGCATGCTGCGTATTaGATAAATGACTTGTATCCA +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPAHAAY*INDLYP
Trigger: TGGATACAAGTCATTTATTCAATACGCAGCATGCGC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGGATTTGAAGTCTGCTaGAAGGCAAGACCTGATTGT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPGFEVC*KARPDC
Trigger: ACAATCAGGTCTTGCCTTTCAGCAGACTTCAAATCC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCAGATTTGCTCTTGCCTaGAGAAGATGTGTATCAATC +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVRFALA*RRCVSI
Trigger: GATTGATACACATCTTCTTCAGGCAAGAGCAAATCT...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTTCCAGAGTAAAGATTTaGGGCTTGAGTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAASRVKI*GLSKIC
Trigger: GCAAATCTTACTCAAGCCTCAAATCTTTACTCTGGA...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGATACTGAGAAGCAAGTaGAGGTTGCTGTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVILRSK*RLLSIQ
Trigger: CTGAATGGACAGCAACCTGCACTTGCTTCTCAGTAT...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGGTGCTGCAACGCTTTaGTGGTTTACAGTTTTAACT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPGAATL*WFTVLT
Trigger: AGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGGTCGGGTAGGTCGCTaGCTTCGGGGCCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYGRVGR*LRGLSL
Trigger: TAGAGAGAGGCCCCGAAGGCAGCGACCTACCCGACC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACCGAGGTGGCTTATCTTaGCTTGGTGGTCGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYRGGLS*LGGRVG
Trigger: ACCTACCCGACCACCAAGGCAAGATAAGCCACCTCG...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGCTGCTTCTGCCGCTaGTCTTTAGGTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACGCFCR*SLGSGT
Trigger: AGTTCCTGAACCTAAAGAGCAGCGGCAGAAGCAGCC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCCGAGGCTGCTTCTaGCGCTGCTCTTTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRARGCF*RCSLGS
Trigger: TGAACCTAAAGAGCAGCGGCAGAAGCAGCCTCGGGC...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGGGCCCTGCCCGAGGCTaGTTCTGCCGCTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRGPARG*FCRCSL
Trigger: TAAAGAGCAGCGGCAGAAGCAGCCTCGGGCAGGGCC...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGCTCCCATGCCTTCCGTaGAGACTCCATCTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWLPCLP*RLHLKG
Trigger: ACCTTTAAGATGGAGTCTGCACGGAAGGCATGGGAG...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTGGGATTTGAGCTGCTaGAGACTGAGACACATAAAC +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPWDLSC*RLRHIN
Trigger: GTTTATGTGTCTCAGTCTGCAGCAGCTCAAATCCCA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGGCTTGAGTAAGATTTaGTCTTGCCTGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQGLSKI*SCLKKM
Trigger: CATCTTCTTCAGGCAAGAGCAAATCTTACTCAAGCC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGGCTTGAGTAAGATTTaGTCTTGCCTGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPGLSKI*SCLKKM
Trigger: CATCTTCTTCAGGCAAGAGCAAATCTTACTCAAGCC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGAAACGGCTGTGCCATaGGCACTGTGGCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAETAVP*ALWRGL
Trigger: CAGCCCCCGCCACAGTGCGCATGGCACAGCCGTTTC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATCTGTTTGTTCTGTTaGTGTTCAGAGAAGAACCGC +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPICLFC*CSEKNR
Trigger: GCGGTTCTTCTCTGAACAGCAACAGAACAAACAGAT...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGAGCAGGTGCTACTTCTaGGGGAGCTGCAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRSRCYF*GSCNPR
Trigger: CCTGGGGTTGCAGCTCCCCCAGAAGTAGCACCTGCT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTTCCTGATTAAATGGTaGTCCCTTCCCATAAGGACT +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHFLIKW*SLPIRT
Trigger: AGTCCTTATGGGAAGGGACCACCATTTAATCAGGAA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGAGGGTGGGGTTGCATTaGCTGGTAAAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCERVGLH*LVKGSV
Trigger: CACAGACCCCTTTACCAGCCAATGCAACCCCACCCT...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATCTGTCGCCTTCTTTTaGGAACAACCTCAAAATCAG +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPSVAFF*EQPQNQ
Trigger: CTGATTTTGAGGTTGTTCCCAAAAGAAGGCGACAGA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGACAGGTCTTCTTAAGGTaGCAGGACGTGATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRQVFLR*QDVMAG
Trigger: GCCGGCCATCACGTCCTGCCACCTTAAGAAGACCTG...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGCCTGGTCATCAAATaGCCCTCTCTTCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACGLVIK*PSLPTF
Trigger: AAAGGTGGGAAGAGAGGGCCATTTGATGACCAGGCC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATCTACTTTCTCCTTTaGCTTCTTAGGACCCGGTTT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPIYFLL*LLRTRF
Trigger: AAACCGGGTCCTAAGAAGCCAAAGGAGAAAGTAGAT...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGAACTGGCGCGGAGGGTaGAGCTTGGATTTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCENWRGG*SLDLLS
Trigger: ACTCAGCAAATCCAAGCTCCACCCTCCGCGCCAGTT...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACGGTGGAAGTGGACTCTaGACTGGTTTGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYGGSGL*TGLWVW
Trigger: CCAGACCCACAAACCAGTCCAGAGTCCACTTCCACC...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGACTGTGAAGTGGGCATaGACTTCCCAGCGGCTACGA +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCETVKWA*TSQRLR
Trigger: TCGTAGCCGCTGGGAAGTCCATGCCCACTTCACAGT...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTATCGTTCCTTTCCAATaGGACCAGGTTTATGTTCTT +
Preference number: 4 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCIVPFQ*DQVYVL
Trigger: AAGAACATAAACCTGGTCCCATTGGAAAGGAACGAT...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp TTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTATCTGTTTGCTTCTGACCACAGCTaGGCTGGGTTTCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: FRVTCITVHSLGFASYLFASDHS*AGFLLS
Trigger: GGACAAGAGAAACCCAGCCCAGCTGTGGTCAGAAGC...AAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCTTTCGGAGACTGCTTTaGTTTCTTTTGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVFRRLL*FLLLFQ
Trigger: CTGAAACAGCAAAAGAAACCAAAGCAGTCTCCGAAA...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGCAGACATTTTTCCTGTaGTCGCCATCATGCTATGCT +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVQTFFL*SPSCYA
Trigger: AGCATAGCATGATGGCGACCACAGGAAAAATGTCTG...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGTGCCATGCGCACTGTaGCGGGGGCTGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYVPCAL*RGLTGT
Trigger: AGTTCCAGTCAGCCCCCGCCACAGTGCGCATGGCAC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCGGCCAGTGCCATTGGTaGCCTCTGTACAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETGQCHW*PLYRRW
Trigger: CCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCC...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGGGCCAGTGCCATTGGTaGCCTCTGTACAGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRGQCHW*PLYRRW
Trigger: CCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCC...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTAGAAGAACCGCTGCGTaGACTGAAGAACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACRRTAA*TEEPLL
Trigger: GAGCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCT...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAATTTCTGAAACTGTTTaGAATAGCCAGGTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQISETV*NSQVEV
Trigger: AACCTCGACCTGGCTATTTCAAACAGTTTCAGAAAT...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAATTTCTGAAACTGTTTaGAATAGCCAGGTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPISETV*NSQVEV
Trigger: AACCTCGACCTGGCTATTTCAAACAGTTTCAGAAAT...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAGAAAGTGAAATTCCATaGTCTCTTGCAGATCTAGCT +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPESEIP*SLADLA
Trigger: AGCTAGATCTGCAAGAGATCATGGAATTTCACTTTC...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTACCCCACCGAGTTTCTaGTTTAGATTTATAGACTTT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAATPPSF*FRFIDF
Trigger: AAAGTCTATAAATCTAAATCAGAAACTCGGTGGGGT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGTGCAGAGTTACCACTaGCAGGGTCAGCACCAGCTG +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRVQSYH*QGQHQL
Trigger: CAGCTGGTGCTGACCCTGTCAGTGGTAACTCTGCAC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAATCATCATTCAGATTTaGCTGGGGGTCTTCAATTAC +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQIIIQI*LGVFNY
Trigger: GTAATTGAAGACCCCCAGTCAAATCTGAATGATGAT...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAGACAGTGGATGCAGCTaGGGCTGGGGCAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGDSGCS*GWGKGN
Trigger: GTTCCCCTTGCCCCAGCCTCAGCTGCATCCACTGTC...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGACAGTGGATGCAGCTaGGGCTGGGGCAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTDSGCS*GWGKGN
Trigger: GTTCCCCTTGCCCCAGCCTCAGCTGCATCCACTGTC...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTATTTTCATTCCCGTTTaGGGCCGGAGCACCAAACTG +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACIFIPV*GRSTKL
Trigger: CAGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAAT...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGCTCAACTGTGAAAAGTaGCTTGCAGAAGGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWLNCEK*LAEGRL
Trigger: CAGCCTACCTTCTGCAAGTCACTTTTCACAGTTGAG...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGTTGAATTGAAGAACTaGATAATTCCTGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQVELKN*IIPEPV
Trigger: CACAGGCTCAGGAATTATTCAGTTCTTCAATTCAAC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGGACGGCTCAAACTCTaGGCCTGTGCTTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLGRLKL*ACACGV
Trigger: GACCCCACAAGCACAGGCTCAGAGTTTGAGCCGTCC...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGACTGGAACTGTTTCTaGTACACAACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQDWNCF*YTTLFI
Trigger: AATGAACAGTGTTGTGTATCAGAAACAGTTCCAGTC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACCAAATGTCTTGTGGCTaGGTCCTCTTCCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYQMSCG*VLFPQL
Trigger: GAGCTGTGGGAAGAGGACTCAGCCACAAGACATTTG...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTCTCCTTGCCCACCTTaGTTGTTACTGGCCCATGAT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACSPCPP*LLLAHD
Trigger: ATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCTCCTTCAGTTCGGATaGACTAAGGATGGATGGGCG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCELLQFG*TKDGWA
Trigger: CGCCCATCCATCCTTAGTGCATCCGAACTGAAGGAG...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTTTCAGGTGTTTTTaGAGTTTGATCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVAFRCF*SLILTA
Trigger: AGCAGTGAGGATCAAACTGCAAAAACACCTGAAAGC...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCTGCTTCAATTTCTCTaGGCACGCTGCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCELLQFL*ARCLPL
Trigger: CAGAGGAAGGCAGCGTGCGCAGAGAAATTGAAGCAG...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGTGCTGCTGCCACTGTTaGTGTTTCATCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCECCCHC*CFICSC
Trigger: GCAGGAGCAGATGAAACAGCAACAGTGGCAGCAGCA...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGCAGATCTAGCTATATaGTCAAATGACTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPADLAI*SNDSEL
Trigger: TAGCTCTGAGTCATTTGAGCATATAGCTAGATCTGC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTAGTAATACTCGCCTCTaGCTCGGCCTCTGTATCCTT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACSNTRL*LGLCIL
Trigger: AAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACT...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGGTCAGCACCAGCTGTaGCTGAGGCCTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRGQHQL*LRPGHQ
Trigger: TTGATGACCAGGCCTCAGGCACAGCTGGTGCTGACC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTAGTATCCTCCATCTTTaGATTATTAGTAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAASILHL*IISSHS
Trigger: ACTGTGGCTACTAATAATGCAAAGATGGAGGATACT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCAGTAAGATTTGCTCTTaGCTGAAGAAGATGTGTATC +
Preference number: 4 (lower is better)
Translates to: TQGSRRATADGFMGPPSVSKICS*LKKMCI
Trigger: GATACACATCTTCTTCAGGCAAGAGCAAATCTTACT...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGGCTTGAGTAAGATTTaGTCTTGCCTGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPGLSKI*SCLKKM
Trigger: CATCTTCTTCAGGCAAGAGCAAATCTTACTCAAGCC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGACTGAAGAACCTCTaGTCTCTGCTTTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRGLKNL*SLLCLG
Trigger: CCCCAGGCAAAGCAGAGAGCAGAGGTTCTTCAGTCC...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTCACCTTGCTTGTTACTaGCCCATGATTTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACHLACY*PMIWEQ
Trigger: CTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTG...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTTCTCTAAGTTCCTCTaGAGATGGCTGCTTTTCTAT +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHFSKFL*RWLLFY
Trigger: ATAGAAAAGCAGCCATCTCCAGAGGAACTTAGAGAA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGCTGCAACGCTTTGCTaGTTTACAGTTTTAACTACA +
Preference number: 4 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQAATLC*FTVLTT
Trigger: TGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTCGGCCTCTGTATCCTTaGTCTGGAAACCAATCCCTA +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACRPLYP*SGNQSL
Trigger: TAGGGATTGGTTTCCAGACCAAGGATACAGAGGCCG...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGTTTTCGCTCAAATTTTaGAGGTCGTTTATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVFSLKF*RSFICR
Trigger: CCGGCAGATAAACGACCTCCAAAATTTGAGCGAAAA...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTCCGTCTAAATCGAGGTaGCTTATCTTGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACPSKSR*LILPWW
Trigger: CCACCAAGGCAAGATAAGCCACCTCGATTTAGACGG...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGGCCTGGTCATCAAATaGCCCTCTCTTCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEGLVIK*PSLPTF
Trigger: AAAGGTGGGAAGAGAGGGCCATTTGATGACCAGGCC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGCTGTGCCTGAGGCCTaGTCATCAAATGGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRAVPEA*SSNGPL
Trigger: GAGAGGGCCATTTGATGACCAGGCCTCAGGCACAGC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTATCTACTTTCTCCTTTaGCTTCTTAGGACCCGGTTT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPIYFLL*LLRTRF
Trigger: AAACCGGGTCCTAAGAAGCCAAAGGAGAAAGTAGAT...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGTCTGGGTCTGGGTCTaGGTCTGCACTGTCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTVWVWV*VCTVEA
Trigger: GGCCTCGACAGTGCAGACCCAGACCCAGACCCAGAC...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCATGGGACTGTGAAGTaGGCATGGACTTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRHGTVK*AWTSQR
Trigger: CCGCTGGGAAGTCCATGCCCACTTCACAGTCCCATG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATCGTTCCTTTCCAATaGGACCAGGTTTATGTTCTT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPIVPFQ*DQVYVL
Trigger: AAGAACATAAACCTGGTCCCATTGGAAAGGAACGAT...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGTTTCTCTTGTCCTTCTaGCTCGACCTGCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEFLLSF*LDLLGI
Trigger: GATGCCCAGCAGGTCGAGCCAGAAGGACAAGAGAAA...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCTTCTGACCACAGCTaGGCTGGGTTTCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRASDHS*AGFLLS
Trigger: GGACAAGAGAAACCCAGCCCAGCTGTGGTCAGAAGC...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTTTCGGAGACTGCTTTaGTTTCTTTTGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHFRRLL*FLLLFQ
Trigger: CTGAAACAGCAAAAGAAACCAAAGCAGTCTCCGAAA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGAATGGACTAGATGTTaGCGTGGTGCTTCGACCACC +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEEWTRC*RGASTT
Trigger: GGTGGTCGAAGCACCACGCCAACATCTAGTCCATTC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACGAATGGACTAGATGTTaGCGTGGTGCTTCGACCACC +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYEWTRC*RGASTT
Trigger: GGTGGTCGAAGCACCACGCCAACATCTAGTCCATTC...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTTTCATTTTGCTAGACTaGCTGTTTGGACTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAFILLD*LFGLVD
Trigger: ATCAACAAGTCCAAACAGCCAGTCTAGCAAAATGAA...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGTGCCATGCGCACTGTaGCGGGGGCTGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIVPCAL*RGLTGT
Trigger: AGTTCCAGTCAGCCCCCGCCACAGTGCGCATGGCAC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACGTGCCATGCGCACTGTaGCGGGGGCTGACTGGAACT +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNVPCAL*RGLTGT
Trigger: AGTTCCAGTCAGCCCCCGCCACAGTGCGCATGGCAC...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTATCTGTTTCCTCTGTACAGGCGCTaGGAAGGTGTTAGTATGTGG +
Preference number: 4 (lower is better)
Translates to: FRVTCITVHSLGFASYLFPLYRR*EGVSMW
Trigger: CCACATACTAACACCTTCCCAGCGCCTGTACAGAGG...AAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACACTGGCCAGTGCCATTaGTGGCCTCTGTACAGGCGC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYTGQCH*WPLYRR
Trigger: GCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGT...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAATAGAAGCCAGATGTTaGGGGTGGGGTTGCATTGGC +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRIEARC*GWGCIG
Trigger: GCCAATGCAACCCCACCCTCAACATCTGGCTTCTAT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTATAGGACTGCATCATaGGCCACCTTGGGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACYRTAS*ATLGQN
Trigger: GTTTTGACCCAAGGTGGCTCATGATGCAGTCCTATA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAAGCATGATAGGGATCTaGCCCCCACATCATTCGAGG +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRSMIGI*PPHHSR
Trigger: CCTCGAATGATGTGGGGGTCAGATCCCTATCATGCT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCAGCACCAGCTGTGCCTaGGGCCTGGTCATCAAATGG +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETSTSCA*GLVIKW
Trigger: CCATTTGATGACCAGGCCTCAGGCACAGCTGGTGCT...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAAACAGGAGCCGAGGCTaGGGTTGGAACTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGNRSRG*GWNWSW
Trigger: CCAGCTCCAGTTCCAACCTCAGCCTCGGCTCCTGTT...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTGGCACAGCTGTAGCTaGGACCACTGGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETWHSCS*DHWGWR
Trigger: TCTCCAACCCCAGTGGTCTCAGCTACAGCTGTGCCA...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCAGAGCCATGGGACTGTaGAGTGGGCATGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETRAMGL*SGHGLP
Trigger: GGGAAGTCCATGCCCACTTCACAGTCCCATGGCTCT...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGATTCCACGCACTGACTaGAGGTGGCTGTGGTGGACT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRIPRTD*RWLWWT
Trigger: AGTCCACCACAGCCACCTTCAGTCAGTGCGTGGAAT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGAGATTTTGTACTCAATaGAGAGGTAGTGTAAGTACC +
Preference number: 4 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLRFCTQ*RGSVST
Trigger: GGTACTTACACTACCTCTTCATTGAGTACAAAATCT...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGATGGGCTGAGGATTTaGAGTCTGCTGAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEDGLRI*SLLKGK
Trigger: CTTGCCTTTCAGCAGACTTCAAATCCTCAGCCCATC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAGGACGGCTCAAACTCTaGGCCTGTGCTTGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGGRLKL*ACACGV
Trigger: GACCCCACAAGCACAGGCTCAGAGTTTGAGCCGTCC...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGGGACCAGGTTAGGCTaGGAGAGAATCTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLGTRLG*ERIWGA
Trigger: TGCACCCCAGATTCTCTCTCAGCCTAACCTGGTCCC...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGAATGTTTAGAAACCTACTTCTGGGGGAGCTaGAACCCCAGGTTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QKTTDLKSLANVLECLETYFWGS*NPRFGL
Trigger: CAGCCCAAACCTGGGGTTGCAGCTCCCCCAGAAGTA...GGTTTCTAAACATTCAAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGTCTCCTTGCCCACCTTaGTTGTTACTGGCCCATGAT +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCESPCPP*LLLAHD
Trigger: ATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGA...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGACTCCTTCAGTTCGGATaGACTAAGGATGGATGGGCG +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRLLQFG*TKDGWA
Trigger: CGCCCATCCATCCTTAGTGCATCCGAACTGAAGGAG...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCATCTAACTCTTTCTCTTaGTGTCTTGCCCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASSNSFS*CLALSI
Trigger: AATGGAGAGGGCAAGACAGCAAGAGAAAGAGTTAGA...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGGTATAGGCATAAACTaGTCATGTCTTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWGIGIN*SCLLGG
Trigger: GCCACCAAGAAGACATGAGCAGTTTATGCCTATACC...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTCATACCTGTACGACTTaGTCTTCCTTCTTTCGGCGT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACHTCTT*SSFFRR
Trigger: ACGCCGAAAGAAGGAAGAGCAAGTCGTACAGGTATG...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGGCCCTGCCCGAGGCTaGTTCTGCCGCTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKGPARG*FCRCSL
Trigger: TAAAGAGCAGCGGCAGAAGCAGCCTCGGGCAGGGCC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTGCGGGCTCTGCTGCTaGTGTGCAATGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTCGLCC*CAMREG
Trigger: GCCTTCCCTCATTGCACAGCAGCAGCAGAGCCCGCA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGATGCGGGCTCTGCTGCTaGTGTGCAATGAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGCGLCC*CAMREG
Trigger: GCCTTCCCTCATTGCACAGCAGCAGCAGAGCCCGCA...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGGCTGGGATTTGAGCTaGTGCAGACTGAGACACATA +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEGWDLS*CRLRHI
Trigger: TATGTGTCTCAGTCTGCAGCAGCTCAAATCCCAGCC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCTGGGGTGCAAACTGTaGAGGAAACGGCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRLGCKL*RKRLCH
Trigger: ATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTTGGAGGGCGTAAACTaGGTCCAGGTCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACLEGVN*VQVHSF
Trigger: AAAACTATGGACCTGGACCCAGTTTACGCCCTCCAA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGATTCAGTTTGGCCTGTaGAGGACCACAAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWIQFGL*RTTSYS
Trigger: AGAATAGCTTGTGGTCCTCCACAGGCCAAACTGAAT...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACTGCTGAAACATATATaGAGGCATCATAGCTCTATA +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPLLKHI*RHHSSI
Trigger: TATAGAGCTATGATGCCTCCATATATGTTTCAGCAG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGAGGGTGGGGTTGCATTaGCTGGTAAAGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRRVGLH*LVKGSV
Trigger: CACAGACCCCTTTACCAGCCAATGCAACCCCACCCT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCGGCCTCTGTATCCTTaGTCTGGAAACCAATCCCTA +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCERPLYP*SGNQSL
Trigger: TAGGGATTGGTTTCCAGACCAAGGATACAGAGGCCG...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACGCAGGTGGATTAACTaGTTCTTGAACAACATTATT +
Preference number: 4 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPRRWIN*FLNNII
Trigger: AATAATGTTGTTCAAGAACCAGTTAATCCACCTGCG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCACGCAGGTGGATTAACTaGTTCTTGAACAACATTATT +
Preference number: 4 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPRRWIN*FLNNII
Trigger: AATAATGTTGTTCAAGAACCAGTTAATCCACCTGCG...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTAATGGGAACTGGAGCTaGGGTGGAGGCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTNGNWS*GGGRSC
Trigger: GCAGCTCCTGCCTCCACCCCAGCTCCAGTTCCCATT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCTGGAACTGATGGTTaGGATGAGGAAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRAGTDG*DEEEAV
Trigger: CACAGCCTCTTCCTCATCCCAACCATCAGTTCCAGC...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCATGGGACTGTGAAGTaGGCATGGACTTCCCAGCGG +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYHGTVK*AWTSQR
Trigger: CCGCTGGGAAGTCCATGCCCACTTCACAGTCCCATG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTACCAGACTCAAGTCTaGAAGCTTCTGAGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPYQTQV*KLLSFN
Trigger: ATTAAAGCTCAGAAGCTTCCAGACTTGAGTCTGGTA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTTTCGGAGACTGCTTTaGTTTCTTTTGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPFRRLL*FLLLFQ
Trigger: CTGAAACAGCAAAAGAAACCAAAGCAGTCTCCGAAA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTGAGCCAGGGATGGTaGAGCCAATCGCGCATGCTG +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCILSQGW*SQSRML
Trigger: CAGCATGCGCGATTGGCTCCACCATCCCTGGCTCAG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCCTGCTGGAGAGCACTaGGGGATTGGGCAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRPAGEH*GIGQCY
Trigger: ATAACACTGCCCAATCCCCCAGTGCTCTCCAGCAGG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGCTTCGACCACCAATTaGAGGTGTTCCTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACASTTN*RCSWFD
Trigger: ATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGATGGGGGCATTCGCCGTaGAATACCAACTTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRWGHSP*NTNFSK
Trigger: CTTGGAAAAGTTGGTATTTCACGGCGAATGCCCCCA...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCTGATCAGAGGAAGGTaGCCCAGCAGACTTACCACC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYLIRGR*PSRLTT
Trigger: GGTGGTAAGTCTGCTGGGTCACCTTCCTCTGATCAG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTAAATCGTGGTGGCAATaGTTTCTGAAACTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPKSWWQ*FLKLFE
Trigger: TTCAAACAGTTTCAGAAATCATTGCCACCACGATTT...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGGCTGTGACTGGAGATaGAGTGGATGCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYGCDWR*SGCWNR
Trigger: CCTGTTCCAGCATCCACTTCATCTCCAGTCACAGCC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATATGGCACAGCTGTAGCTaGGACCACTGGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIWHSCS*DHWGWR
Trigger: TCTCCAACCCCAGTGGTCTCAGCTACAGCTGTGCCA...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTGGCACAGCTGTAGCTaGGACCACTGGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTWHSCS*DHWGWR
Trigger: TCTCCAACCCCAGTGGTCTCAGCTACAGCTGTGCCA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGCTTATTCCACGCACTaGCTGAAGGTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYAYSTH*LKVAVV
Trigger: CACCACAGCCACCTTCAGTCAGTGCGTGGAATAAGC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAGGATCAGTGCTTCTaGCCACAGCTGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIQDQCF*PQLGWV
Trigger: AACCCAGCCCAGCTGTGGTCAGAAGCACTGATCCTG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTCAGGATCAGTGCTTCTaGCCACAGCTGGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTQDQCF*PQLGWV
Trigger: AACCCAGCCCAGCTGTGGTCAGAAGCACTGATCCTG...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCATGCTGTAGGAGTGACTaGCGCAACTGGGATCTGCGG +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDACCRSD*RNWDLR
Trigger: CCGCAGATCCCAGTTGCGTCAGTCACTCCTACAGCA...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGAGATTTTGTACTCAATaGAGAGGTAGTGTAAGTACC +
Preference number: 4 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVRFCTQ*RGSVST
Trigger: GGTACTTACACTACCTCTTCATTGAGTACAAAATCT...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTATCTGTTTGAGGTGTTCCTGGTTTaGTATCAATGCCACTCCCAA +
Preference number: 4 (lower is better)
Translates to: FRVTCITVHSLGFASYLFEVFLV*YQCHSQ
Trigger: TTGGGAGTGGCATTGATATCAAACCAGGAACACCTC...AAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAACCGCTGCGTGGACTaGAGAACCTCTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDANRCVD*RTSALC
Trigger: GCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGGTT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCAAATGTCTTGTGGCTaGGTCCTCTTCCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRQMSCG*VLFPQL
Trigger: GAGCTGTGGGAAGAGGACTCAGCCACAAGACATTTG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR GCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTAAACAAACTGAGTGTTaGATACTTCTTCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPKQTEC*ILLPIL
Trigger: AAGGATGGGAAGAAGTATGCAACACTCAGTTTGTTT...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTGGGGGATGCTGTTGTaGAAGCAACTTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETWGMLL*KQLGRW
Trigger: CCACCTCCCAAGTTGCTTGCACAACAGCATCCCCCA...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGATCCTCTGGAGATGGCTaGTTTTCTATGATCCCGAGC +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRSSGDG*FSMIPS
Trigger: GCTCGGGATCATAGAAAAGCAGCCATCTCCAGAGGA...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAAGGTTTAGGAGGTTCTaGCTGCCTTGTGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRRFRRF*LPCVPL
Trigger: CAGTGGAACACAAGGCAGGCAGAACCTCCTAAACCT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGGTCAGCACCAGCTGTaGCTGAGGCCTGGTCATCAA +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAGQHQL*LRPGHQ
Trigger: TTGATGACCAGGCCTCAGGCACAGCTGGTGCTGACC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGGAATTCTTCTGTCCTaGACCATTAGGCACACCTTC +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEGILLS*TIRHTF
Trigger: GAAGGTGTGCCTAATGGTGCAGGACAGAAGAATTCC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGATCGAGGGTGGTGGCTaGTTTGAAGATGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRIEGGG*FEDGAE
Trigger: TTCAGCGCCATCTTCAAAGCAGCCACCACCCTCGAT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACGCCCGAGGCTGCTTCTaGCGCTGCTCTTTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNARGCF*RCSLGS
Trigger: TGAACCTAAAGAGCAGCGGCAGAAGCAGCCTCGGGC...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGCCCGAGGCTGCTTCTaGCGCTGCTCTTTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIARGCF*RCSLGS
Trigger: TGAACCTAAAGAGCAGCGGCAGAAGCAGCCTCGGGC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGACGCAACTGGGATCTaGGGCATTGATGCACTGGAA +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRDATGI*GIDALE
Trigger: TTCCAGTGCATCAATGCCGCAGATCCCAGTTGCGTC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGATGGGAAAGACTGCTCTaGATAAAGGCTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRWERLL*IKAGCD
Trigger: ATCGCAGCCAGCCTTTATGCAGAGCAGTCTTTCCCA...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGGCTTGAGTAAGATTTaGTCTTGCCTGAAGAAGATG +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWGLSKI*SCLKKM
Trigger: CATCTTCTTCAGGCAAGAGCAAATCTTACTCAAGCC...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTCAAACTCTGAGCCTGTaGTTGTGGGGTCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLQTLSL*LWGRVL
Trigger: CAGCACACGACCCCACAAGCACAGGCTCAGAGTTTG...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCATCTGACTGGCCAGTaGCATTGGTGGCCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYHLTGQ*HWWPLY
Trigger: GTACAGAGGCCACCAATGGCACTGGCCAGTCAGATG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCTGCAACCCCAGGTTTaGGCTGTGCTGGTGACACTT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYLQPQV*AVLVTL
Trigger: AAGTGTCACCAGCACAGCCCAAACCTGGGGTTGCAG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCTGCTGAAACATATATaGAGGCATCATAGCTCTATA +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLLKHI*RHHSSI
Trigger: TATAGAGCTATGATGCCTCCATATATGTTTCAGCAG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACAGGACTTTTTGTGACTaGAGGCTGAGCAGGTATCTG +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYRTFCD*RLSRYL
Trigger: CAGATACCTGCTCAGCCTCCAGTCACAAAAAGTCCT...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACCATCATGAGCCACCTTaGGTCAAAACCCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYHHEPP*VKTHRS
Trigger: GCTTCTATGGGTTTTGACCCAAGGTGGCTCATGATG...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTCTTCTGTTGGAGCTTaGTCTTGGACCCCACCGAGT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRSSVGA*SWTPPS
Trigger: ACTCGGTGGGGTCCAAGACCAAGCTCCAACAGAAGA...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGTCTGTATCCTTGGTCTaGAAACCAATCCCTATCTCT +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWSVSLV*KPIPIS
Trigger: AGAGATAGGGATTGGTTTCCAGACCAAGGATACAGA...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACCAGGTCTTCTTAAGGTaGCAGGACGTGATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNQVFLR*QDVMAG
Trigger: GCCGGCCATCACGTCCTGCCACCTTAAGAAGACCTG...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCTTATCTTGCCTTGGTaGTCGGGTAGGTCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYLILPW*SGRSLP
Trigger: AGGCAGCGACCTACCCGACCACCAAGGCAAGATAAG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCGCAGGTGGATTAACTaGTTCTTGAACAACATTATT +
Preference number: 4 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPRRWIN*FLNNII
Trigger: AATAATGTTGTTCAAGAACCAGTTAATCCACCTGCG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGAATTCCTTCCTGATTTaGGTGGGCCATTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCENSFLI*VGHCCH
Trigger: GTGGCAACAATGGCCCACCCAAATCAGGAAGGAATT...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGATCTACTTTCTCCTTTaGCTTCTTAGGACCCGGTTT +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWIYFLL*LLRTRF
Trigger: AAACCGGGTCCTAAGAAGCCAAAGGAGAAAGTAGAT...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACTGGCGCGGAGGGTaGAGCTTGGATTTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRNWRGG*SLDLLS
Trigger: ACTCAGCAAATCCAAGCTCCACCCTCCGCGCCAGTT...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCGGTGGAAGTGGACTCTaGACTGGTTTGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETGGSGL*TGLWVW
Trigger: CCAGACCCACAAACCAGTCCAGAGTCCACTTCCACC...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGCTTCTGACCACAGCTaGGCTGGGTTTCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYASDHS*AGFLLS
Trigger: GGACAAGAGAAACCCAGCCCAGCTGTGGTCAGAAGC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTATCTGTTTGCTTCGACCACCAATTaGAGGTGTTCCTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: FRVTCITVHSLGFASYLFASTTN*RCSWFD
Trigger: ATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGC...AAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGAAGGTGTTAGTATGTaGGGCTCTTACCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEEGVSM*GSYQWR
Trigger: CCTCCATTGGTAAGAGCCCCACATACTAACACCTTC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAACCATTAGACGGCTGTaGGGGCACAGTCTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCITIRRL*GHSLWK
Trigger: CTTCCACAGACTGTGCCCTCACAGCCGTCTAATGGT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCTCAGAGCTATTAGGTaGCCCTTCCATCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRLRAIR*PFHLVS
Trigger: AGAGACCAGATGGAAGGGTCACCTAATAGCTCTGAG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGAAAGTGAAATTCCATaGTCTCTTGCAGATCTAGCT +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWESEIP*SLADLA
Trigger: AGCTAGATCTGCAAGAGATCATGGAATTTCACTTTC...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAGCATGATAGGGATCTaGCCCCCACATCATTCGAGG +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYSMIGI*PPHHSR
Trigger: CCTCGAATGATGTGGGGGTCAGATCCCTATCATGCT...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTAGCAACGTCCGTTTTTaGATGAGTTTCCAACTGACT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACSNVRF*MSFQLT
Trigger: AGTCAGTTGGAAACTCATTCAAAAACGGACGTTGCT...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCAACCCCACCGAGTTTCTaGTTTAGATTTATAGACTTT +
Preference number: 4 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASTPPSF*FRFIDF
Trigger: AAAGTCTATAAATCTAAATCAGAAACTCGGTGGGGT...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGAGCTTGGATTTGCTaGGTCCCAGTAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRGAWIC*VPVACF
Trigger: AAAACAAGCTACTGGGACTCAGCAAATCCAAGCTCC...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAAGAGCCATGGGACTGTaGAGTGGGCATGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKRAMGL*SGHGLP
Trigger: GGGAAGTCCATGCCCACTTCACAGTCCCATGGCTCT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACATTCCACGCACTGACTaGAGGTGGCTGTGGTGGACT +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNIPRTD*RWLWWT
Trigger: AGTCCACCACAGCCACCTTCAGTCAGTGCGTGGAAT...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTATTCCACGCACTGACTaGAGGTGGCTGTGGTGGACT +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTIPRTD*RWLWWT
Trigger: AGTCCACCACAGCCACCTTCAGTCAGTGCGTGGAAT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCTCTGCAGAGGAGACTaGGATCATCGCCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYLCRGD*DHRPNF
Trigger: GAAATTGGGGCGATGATCTCAGTCTCCTCTGCAGAG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATGCTGTAGGAGTGACTaGCGCAACTGGGATCTGCGG +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKCCRSD*RNWDLR
Trigger: CCGCAGATCCCAGTTGCGTCAGTCACTCCTACAGCA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGCTGCTGCTGTGCAATaGGGGAAGGCATACAGCTCA +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAAAAVQ*GKAYSS
Trigger: TGAGCTGTATGCCTTCCCTCATTGCACAGCAGCAGC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAGCTGCTGCTGTGCAATaGGGGAAGGCATACAGCTCA +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGAAAVQ*GKAYSS
Trigger: TGAGCTGTATGCCTTCCCTCATTGCACAGCAGCAGC...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGCTGCTGCTGTGCAATaGGGGAAGGCATACAGCTCA +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIAAAVQ*GKAYSS
Trigger: TGAGCTGTATGCCTTCCCTCATTGCACAGCAGCAGC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCTGAAAGGCAAGACCTaGTTGTGCCTTGGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRLKGKT*LCLGKF
Trigger: GAACTTGCCAAGGCACAATCAGGTCTTGCCTTTCAG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGATGGGCTGAGGATTTaGAGTCTGCTGAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRDGLRI*SLLKGK
Trigger: CTTGCCTTTCAGCAGACTTCAAATCCTCAGCCCATC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACACTGTGGCGGGGGCTaGCTGGAACTGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIHCGGG*LELFLI
Trigger: TATCAGAAACAGTTCCAGTCAGCCCCCGCCACAGTG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGACTAGTACTTCCTTaGTCATCATCATCACTGAAG +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACGLVLP*SSSSLK
Trigger: CTTCAGTGATGATGATGAGCAAGGAAGTACTAGTCC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTGGGGGATGCTGTTGTaGAAGCAACTTGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTWGMLL*KQLGRW
Trigger: CCACCTCCCAAGTTGCTTGCACAACAGCATCCCCCA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCTGCTTCAATTTCTCTaGGCACGCTGCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYLLQFL*ARCLPL
Trigger: CAGAGGAAGGCAGCGTGCGCAGAGAAATTGAAGCAG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTCTGCTTCAATTTCTCTaGGCACGCTGCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLLLQFL*ARCLPL
Trigger: CAGAGGAAGGCAGCGTGCGCAGAGAAATTGAAGCAG...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCTGCGATTGCTGTCCTaGCTAGTGAAAATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCELRLLS*LVKIGS
Trigger: AGAACCAATTTTCACTAGGCAGGACAGCAATCGCAG...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTAGACTTGGGAGTAGCTaGCTGCTGAGGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTRLGSS*LLRLSM
Trigger: CATGCTGAGCCTCAGCAGGCAGCTACTCCCAAGTCT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGTGGAGGTCGTTTATCTaGCGGTATAGGCATAAACTG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEWRSFI*RYRHKL
Trigger: CAGTTTATGCCTATACCGGCAGATAAACGACCTCCA...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGGCTGCTTCTGCCGCTaGTCTTTAGGTTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYGCFCR*SLGSGT
Trigger: AGTTCCTGAACCTAAAGAGCAGCGGCAGAAGCAGCC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGCTCTGCTGCTGCTGTaGAATGAGGGAAGGCATACA +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLALLLL*NEGRHT
Trigger: TGTATGCCTTCCCTCATTGCACAGCAGCAGCAGAGC...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGTGGGATTTGAGCTGCTaGAGACTGAGACACATAAAC +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEWDLSC*RLRHIN
Trigger: GTTTATGTGTCTCAGTCTGCAGCAGCTCAAATCCCA...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGGCTGGGATTTGAGCTaGTGCAGACTGAGACACATA +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRGWDLS*CRLRHI
Trigger: TATGTGTCTCAGTCTGCAGCAGCTCAAATCCCAGCC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTTTGGCAAGTTCCTGGTaGTGGACAGCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLLASSW*WTAGKL
Trigger: CAACTTCCCAGCTGTCCAGCACCAGGAACTTGCCAA...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGAATGTTTAGAAACCTTGGCAAGTTCCTGGTaGTGGACAGCTGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: QKTTDLKSLANVLECLETLASSW*WTAGKL
Trigger: CAACTTCCCAGCTGTCCAGCACCAGGAACTTGCCAA...GGTTTCTAAACATTCAAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTCAAACTCTGAGCCTGTaGTTGTGGGGTCGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTQTLSL*LWGRVL
Trigger: CAGCACACGACCCCACAAGCACAGGCTCAGAGTTTG...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTGGGGTGCAAACTGTaGAGGAAACGGCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCILGCKL*RKRLCH
Trigger: ATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCACTGGGGTGCAAACTGTaGAGGAAACGGCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDALGCKL*RKRLCH
Trigger: ATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAG...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACAAGTTCCTCTGGAGATaGCTGCTTTTCTATGATCCC +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYKFLWR*LLFYDP
Trigger: GGGATCATAGAAAAGCAGCCATCTCCAGAGGAACTT...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTCTACAACAGGCTCTTaGGGTTCAACTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACSTTGS*GSTFSS
Trigger: AGAGGAAAAAGTTGAACCCCAAGAGCCTGTTGTAGA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCATTTATAGACTTTCTCTaGTTTAGGCCCTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASFIDFL*FRPFRR
Trigger: TCTTCTGAAGGGCCTAAACCAGAGAAAGTCTATAAA...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGAATGTTTAGAAACCTCTTCTGTTGGAGCTTaGTCTTGGACCCCACCGAGT +
Preference number: 4 (lower is better)
Translates to: QKTTDLKSLANVLECLETSSVGA*SWTPPS
Trigger: ACTCGGTGGGGTCCAAGACCAAGCTCCAACAGAAGA...GGTTTCTAAACATTCAAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTCTGTATCCTTGGTCTaGAAACCAATCCCTATCTCT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACSVSLV*KPIPIS
Trigger: AGAGATAGGGATTGGTTTCCAGACCAAGGATACAGA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGACTTATCTTGCCTTGGTaGTCGGGTAGGTCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGLILPW*SGRSLP
Trigger: AGGCAGCGACCTACCCGACCACCAAGGCAAGATAAG...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAAATTCCTTCCTGATTTaGGTGGGCCATTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRNSFLI*VGHCCH
Trigger: GTGGCAACAATGGCCCACCCAAATCAGGAAGGAATT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGGGCACACCTTCTTGGTaGTGTGCAGAGTTACCACTG +
Preference number: 4 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRGTPSW*CAELPL
Trigger: CAGTGGTAACTCTGCACACCACCAAGAAGGTGTGCC...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACACTGTGAAGTGGGCATaGACTTCCCAGCGGCTACGA +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNTVKWA*TSQRLR
Trigger: TCGTAGCCGCTGGGAAGTCCATGCCCACTTCACAGT...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGCTGTTAGAGAGCCATaGGACTGTGAAGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYAVREP*DCEVGM
Trigger: CATGCCCACTTCACAGTCCCATGGCTCTCTAACAGC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGCTTCTGACCACAGCTaGGCTGGGTTTCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIASDHS*AGFLLS
Trigger: GGACAAGAGAAACCCAGCCCAGCTGTGGTCAGAAGC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGTAATTAGCAGTGCTTaGTCCACTGGCACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRVISSA*STGTAA
Trigger: AGCAGCAGTGCCAGTGGACCAAGCACTGCTAATTAC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCAGGACCACGGAAGGCTaGGAAAGACTGCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETRTTEG*ERLLCI
Trigger: TATGCAGAGCAGTCTTTCCCAGCCTTCCGTGGTCCT...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGCTGGTGCTGGACAGCTaGGAAGTTGTGGATAGCTGT +
Preference number: 4 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRLVLDS*EVVDSC
Trigger: ACAGCTATCCACAACTTCCCAGCTGTCCAGCACCAG...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCACCTGCTGGAGAGCACTaGGGGATTGGGCAGTGTTAT +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAPAGEH*GIGQCY
Trigger: ATAACACTGCCCAATCCCCCAGTGCTCTCCAGCAGG...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGGCTGGCTTACTTaGGCAGGACGGCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYKGWLT*AGRLKL
Trigger: GAGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTT...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCTTCGACCACCAATTaGAGGTGTTCCTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRASTTN*RCSWFD
Trigger: ATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGC...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTGTGGCAAACGAGCATaGCTCATGAGGCCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTCGKRA*LMRPVV
Trigger: GACCACAGGCCTCATGAGCCATGCTCGTTTGCCACA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGATCCACAAGGACCCCTaGCTACATGTGGCAAACGAG +
Preference number: 4 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRIHKDP*LHVANE
Trigger: CTCGTTTGCCACATGTAGCCAGGGGTCCTTGTGGAT...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182660.8
3UTR CAA 72 bp GAATGGCCTTTAACTCCTGATCATCCTGCTGCCATCTaGCCATCAAAGTTTGATCATCCCAAGAACAGAAAC +
Preference number: 4 (lower is better)
Translates to: EWPLTPDHPAAI*PSKFDHPKNRN
Trigger: GTTTCTGTTCTTGGGATGATCAAACTTTGATGGCAAGATGGCAGCAGGATGATCAGGAGTTAAAGGCCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACCTTGTTACTGGCCCATaGTTTGGGAGCAGGTGCTAC +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNLVTGP*FGSRCY
Trigger: GTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAG...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCATAGCAGGCCTTCCTaGTATCATTCGAGGATCCAT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRHSRPS*YHSRIH
Trigger: ATGGATCCTCGAATGATATCAGGAAGGCCTGCTATG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGCTTATTCCACGCACTaGCTGAAGGTGGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKAYSTH*LKVAVV
Trigger: CACCACAGCCACCTTCAGTCAGTGCGTGGAATAAGC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGATCAACACCACTCTCTTaGCCATTTCTTGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRSTPLS*PFLVPS
Trigger: AGAGGGAACAAGAAATGGTCAAGAGAGTGGTGTTGA...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCGGAGCACCAAACTaGATTGTGTCAATTCCAATT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRAGAPN*IVSIPI
Trigger: AATTGGAATTGACACAATTCAGTTTGGTGCTCCGGC...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTATTTTCATTCCCGTTTaGGGCCGGAGCACCAAACTG +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLIFIPV*GRSTKL
Trigger: CAGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAAT...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTCTGCAGAGGAGACTaGGATCATCGCCCCAATTTC +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCILCRGD*DHRPNF
Trigger: GAAATTGGGGCGATGATCTCAGTCTCCTCTGCAGAG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGAATGTTTAGAAACCGATGGGCTGAGGATTTaGAGTCTGCTGAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QKTTDLKSLANVLECLETDGLRI*SLLKGK
Trigger: CTTGCCTTTCAGCAGACTTCAAATCCTCAGCCCATC...GGTTTCTAAACATTCAAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGAGGTGTTCCTGGTTTaGTATCAATGCCACTCCCAA +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRREVFLV*YQCHSQ
Trigger: TTGGGAGTGGCATTGATATCAAACCAGGAACACCTC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGGGCCTGATTACCTCTaGCTCCAGACAGTGATCCAC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKGPDYL*LQTVIH
Trigger: GTGGATCACTGTCTGGAGTCAGAGGTAATCAGGCCC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGGATTCCATCTCCTTaGCCACCTTGCTTGTTACTG +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRWIPSP*PPCLLL
Trigger: CAGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCA...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTTTCCTGATCTCCAGCTaGCTGCAGACTGGGAAATTC +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLFLISS*LQTGKF
Trigger: GAATTTCCCAGTCTGCAGGCAGCTGGAGATCAGGAA...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTTCCTGATCTCCAGCTaGCTGCAGACTGGGAAATTC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYFLISS*LQTGKF
Trigger: GAATTTCCCAGTCTGCAGGCAGCTGGAGATCAGGAA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGACTGCGATTGCTGTCCTaGCTAGTGAAAATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRLRLLS*LVKIGS
Trigger: AGAACCAATTTTCACTAGGCAGGACAGCAATCGCAG...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGCAGATCTAGCTATATaGTCAAATGACTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACADLAI*SNDSEL
Trigger: TAGCTCTGAGTCATTTGAGCATATAGCTAGATCTGC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAAGACTTGGGAGTAGCTaGCTGCTGAGGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKRLGSS*LLRLSM
Trigger: CATGCTGAGCCTCAGCAGGCAGCTACTCCCAAGTCT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCAGTAATACTCGCCTCTaGCTCGGCCTCTGTATCCTT +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETSNTRL*LGLCIL
Trigger: AAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACT...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAATCGAGGGTGGTGGCTaGTTTGAAGATGGCGCTGAA +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIIEGGG*FEDGAE
Trigger: TTCAGCGCCATCTTCAAAGCAGCCACCACCCTCGAT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCTCCCATGCCTTCCGTaGAGACTCCATCTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYLPCLP*RLHLKG
Trigger: ACCTTTAAGATGGAGTCTGCACGGAAGGCATGGGAG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGGCTCACAATGGGAGGTaGTGTAGAAGTTACTGGGGA +
Preference number: 4 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRAHNGR*CRSYWG
Trigger: TCCCCAGTAACTTCTACAGCACCTCCCATTGTGAGC...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTGGGAAAGACTGCTCTaGATAAAGGCTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYWERLL*IKAGCD
Trigger: ATCGCAGCCAGCCTTTATGCAGAGCAGTCTTTCCCA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACCTGTGGTCGCCATCATaGTATGCTGTGTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNLWSPS*YAVFQQ
Trigger: CTGCTGGAACACAGCATAGCATGATGGCGACCACAG...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGGACTGAAGAACCTCTaGTCTCTGCTTTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYGLKNL*SLLCLQ
Trigger: CTGAAGGCAAAGCAGAGAGCAGAGGTTCTTCAGTCC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACTCTGCTCTCTGCTTTaGCTGGGGTGCAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKLCSLL*LGCKLC
Trigger: GCACAGTTTGCACCCCAGGCAAAGCAGAGAGCAGAG...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGTGCACTAAGGATGGATaGGCGTTCAGGTTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRCTKDG*AFRFRS
Trigger: GCTTCTGAACCTGAACGCCCATCCATCCTTAGTGCA...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGTTGTGCAAGCAACTTaGGAGGTGGTGGCAAGTGTG +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIVVQAT*EVVASV
Trigger: CACACTTGCCACCACCTCCCAAGTTGCTTGCACAAC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCATCATGAGCCACCTTaGGTCAAAACCCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRHHEPP*VKTHRS
Trigger: GCTTCTATGGGTTTTGACCCAAGGTGGCTCATGATG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGGTGACCCTTCCATCTaGTCTCTTCTGATTAACGGC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYGDPSI*SLLING
Trigger: GCCGTTAATCAGAAGAGACCAGATGGAAGGGTCACC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGGTGACCCTTCCATCTaGTCTCTTCTGATTAACGGC +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLGDPSI*SLLING
Trigger: GCCGTTAATCAGAAGAGACCAGATGGAAGGGTCACC...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGTTTTCGCTCAAATTTTaGAGGTCGTTTATCTGCCGG +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEFSLKF*RSFICR
Trigger: CCGGCAGATAAACGACCTCCAAAATTTGAGCGAAAA...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGCCGTCTAAATCGAGGTaGCTTATCTTGCCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRPSKSR*LILPWW
Trigger: CCACCAAGGCAAGATAAGCCACCTCGATTTAGACGG...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGTCATTCAGATTTGACTaGGGGTCTTCAATTACAGTT +
Preference number: 4 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWSFRFD*GSSITV
Trigger: AACTGTAATTGAAGACCCCCAGTCAAATCTGAATGA...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTCTGGAACTAGAGCGGTaGCTGATGCCAAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLLELER*LMPKWE
Trigger: TTCCCATTTTGGCATCAGCCACCGCTCTAGTTCCAG...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGCTGGAACTGATGGTTaGGATGAGGAAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTAGTDG*DEEEAV
Trigger: CACAGCCTCTTCCTCATCCCAACCATCAGTTCCAGC...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGCTGTTAGAGAGCCATaGGACTGTGAAGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTAVREP*DCEVGM
Trigger: CATGCCCACTTCACAGTCCCATGGCTCTCTAACAGC...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCGTAATTAGCAGTGCTTaGTCCACTGGCACTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETVISSA*STGTAA
Trigger: AGCAGCAGTGCCAGTGGACCAAGCACTGCTAATTAC...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAATCCATATAGAAGGCTaGGATTTGAGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRIHIEG*DLSCCR
Trigger: TCTGCAGCAGCTCAAATCCCAGCCTTCTATATGGAT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAAGGACCACGGAAGGCTaGGAAAGACTGCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGRTTEG*ERLLCI
Trigger: TATGCAGAGCAGTCTTTCCCAGCCTTCCGTGGTCCT...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGACCTGATTGTGCCTTaGCAAGTTCCTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIDLIVP*QVPGAG
Trigger: TCCAGCACCAGGAACTTGCCAAGGCACAATCAGGTC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGACCTGATTGTGCCTTaGCAAGTTCCTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDADLIVP*QVPGAG
Trigger: TCCAGCACCAGGAACTTGCCAAGGCACAATCAGGTC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAAAGGCTGGCTTACTTaGGCAGGACGGCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAKGWLT*AGRLKL
Trigger: GAGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAAAAGGCTGGCTTACTTaGGCAGGACGGCTCAAACTC +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIKGWLT*AGRLKL
Trigger: GAGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGACAGACATTTTTCCTGTaGTCGCCATCATGCTATGCT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRQTFFL*SPSCYA
Trigger: AGCATAGCATGATGGCGACCACAGGAAAAATGTCTG...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGAATGGACTAGATGTTaGCGTGGTGCTTCGACCACC +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAEWTRC*RGASTT
Trigger: GGTGGTCGAAGCACCACGCCAACATCTAGTCCATTC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAAGAAGAACCGCTGCGTaGACTGAAGAACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIRRTAA*TEEPLL
Trigger: GAGCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAGAAGAACCGCTGCGTaGACTGAAGAACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDARRTAA*TEEPLL
Trigger: GAGCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTCACTGTCCACTCTCTaGGTTTTGCCTCCTATCTGT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRSLSTL*VLPPIC
Trigger: ACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGA...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGGACCAAATGTCTTGTaGCTGAGTCCTCTTCCCACA +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLGPNVL*LSPLPT
Trigger: TGTGGGAAGAGGACTCAGCCACAAGACATTTGGTCC...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
3UTR CAA 72 bp CTCCTGATCATCCTGCTGCCATCTTGCCATCAAAGTTaGATCATCCCAAGAACAGAAACTGTAACTATTACC +
Preference number: 4 (lower is better)
Translates to: LLIILLPSCHQS*IIPRTETVTIT
Trigger: GGTAATAGTTACAGTTTCTGTTCTTGGGATGATCAAACTTTGATGGCAAGATGGCAGCAGGATGATCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCAGTTGCTTTTCATCCTaGTCAGAGGAAGGTGACCCA +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETSCFSS*SEEGDP
Trigger: TGGGTCACCTTCCTCTGATCAGGATGAAAAGCAACT...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGGGTGTTTTTGCAGTTTaGTCCTCACTGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRGVFAV*SSLLLS
Trigger: AGAGAGCAGCAGTGAGGATCAAACTGCAAAAACACC...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACCTCAGAGCTATTAGGTaGCCCTTCCATCTGGTCTCT +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNLRAIR*PFHLVS
Trigger: AGAGACCAGATGGAAGGGTCACCTAATAGCTCTGAG...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTCAAAACAAGCAGACTaGGTATTTGTATCAACATGG +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACSKQAD*VFVSTW
Trigger: CCATGTTGATACAAATACTCAGTCTGCTTGTTTTGA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTCTCTTCCCACCTTTTaGTGGTGGGCCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYSLPTF*WWAISS
Trigger: AGAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGCCGGAGCACCAAACTaGATTGTGTCAATTCCAATT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRAGAPN*IVSIPI
Trigger: AATTGGAATTGACACAATTCAGTTTGGTGCTCCGGC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAATTTTCATTCCCGTTTaGGGCCGGAGCACCAAACTG +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIIFIPV*GRSTKL
Trigger: CAGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAAT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTCTGAAAGGCAAGACCTaGTTGTGCCTTGGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTLKGKT*LCLGKF
Trigger: GAACTTGCCAAGGCACAATCAGGTCTTGCCTTTCAG...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGATGGGCTGAGGATTTaGAGTCTGCTGAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIDGLRI*SLLKGK
Trigger: CTTGCCTTTCAGCAGACTTCAAATCCTCAGCCCATC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGATGGGCTGAGGATTTaGAGTCTGCTGAAAGGCAAG +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTDGLRI*SLLKGK
Trigger: CTTGCCTTTCAGCAGACTTCAAATCCTCAGCCCATC...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGTCCAGAGTAAAGATTTaGGGCTTGAGTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCESRVKI*GLSKIC
Trigger: GCAAATCTTACTCAAGCCTCAAATCTTTACTCTGGA...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGACTGGAACTGTTTCTaGTACACAACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEDWNCF*YTTLFI
Trigger: AATGAACAGTGTTGTGTATCAGAAACAGTTCCAGTC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTAAACAAACTGAGTGTTaGATACTTCTTCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACKQTEC*ILLPIL
Trigger: AAGGATGGGAAGAAGTATGCAACACTCAGTTTGTTT...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTGGATTCCATCTCCTTaGCCACCTTGCTTGTTACTG +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYWIPSP*PPCLLL
Trigger: CAGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCATTCCTGATCTCCAGCTaGCTGCAGACTGGGAAATTC +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAFLISS*LQTGKF
Trigger: GAATTTCCCAGTCTGCAGGCAGCTGGAGATCAGGAA...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACGCAGATCTAGCTATATaGTCAAATGACTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYADLAI*SNDSEL
Trigger: TAGCTCTGAGTCATTTGAGCATATAGCTAGATCTGC...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR GCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAAGGTTTAGGAGGTTCTaGCTGCCTTGTGTTCCACTG +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGRFRRF*LPCVPL
Trigger: CAGTGGAACACAAGGCAGGCAGAACCTCCTAAACCT...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCATACCTGTACGACTTaGTCTTCCTTCTTTCGGCGT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYHTCTT*SSFFRR
Trigger: ACGCCGAAAGAAGGAAGAGCAAGTCGTACAGGTATG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGACCTTCTGGCTCGACCTaGTGGGCATCTTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGPSGST*WASFTF
Trigger: AAAAGTGAAAGATGCCCAGCAGGTCGAGCCAGAAGG...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTCCCATGCCTTCCGTaGAGACTCCATCTTAAAGGT +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCILPCLP*RLHLKG
Trigger: ACCTTTAAGATGGAGTCTGCACGGAAGGCATGGGAG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAGCTCACAATGGGAGGTaGTGTAGAAGTTACTGGGGA +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGAHNGR*CRSYWG
Trigger: TCCCCAGTAACTTCTACAGCACCTCCCATTGTGAGC...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGCTCACAATGGGAGGTaGTGTAGAAGTTACTGGGGA +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIAHNGR*CRSYWG
Trigger: TCCCCAGTAACTTCTACAGCACCTCCCATTGTGAGC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAGTCGCCATCATGCTATaGTGTGTTCCAGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGVAIML*CVPAGI
Trigger: AATCCCTGCTGGAACACAGCATAGCATGATGGCGAC...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACTGTGGTCGCCATCATaGTATGCTGTGTTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKLWSPS*YAVFQQ
Trigger: CTGCTGGAACACAGCATAGCATGATGGCGACCACAG...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAAGAACCTCTGCTCTCTaGTTTGCCTGGGGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKRTSAL*FAWGAN
Trigger: GTTTGCACCCCAGGCAAAGCAGAGAGCAGAGGTTCT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTACTGGCCCATGATTTaGGAGCAGGTGCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTYWPMI*EQVLLL
Trigger: CAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACCACCTTGCTTGTTACTaGCCCATGATTTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNHLACY*PMIWEQ
Trigger: CTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTG...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAAGGTGGGAACCTCATaGGACCATGTAGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAKVGTS*DHVEED
Trigger: ATCCTCCTCTACATGGTCCCATGAGGTTCCCACCTT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAATCGTTATCAGGTACTaGAGGCTTGGAGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAIVIRY*RLGGKG
Trigger: CCCTTTCCCTCCAAGCCTCCAGTACCTGATAACGAT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGATCTACAACAGGCTCTTaGGGTTCAACTTTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRSTTGS*GSTFSS
Trigger: AGAGGAAAAAGTTGAACCCCAAGAGCCTGTTGTAGA...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTTTATAGACTTTCTCTaGTTTAGGCCCTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LVYKPTEDANVTPEVRACFIDFL*FRPFRR
Trigger: TCTTCTGAAGGGCCTAAACCAGAGAAAGTCTATAAA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCACTTCTTCTCTTCTGTTaGAGCTTGGTCTTGGACCCC +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDALLLFC*SLVLDP
Trigger: GGGGTCCAAGACCAAGCTCCAACAGAAGAGAAGAAG...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTCTGCTCATGTCTTCTTaGTGGCTCTCCATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTLLMSS*WLSIFR
Trigger: CCTGAAGATGGAGAGCCACCAAGAAGACATGAGCAG...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAATTCCTTCCTGATTTaGGTGGGCCATTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYNSFLI*VGHCCH
Trigger: GTGGCAACAATGGCCCACCCAAATCAGGAAGGAATT...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGGCCTGGTCATCAAATaGCCCTCTCTTCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKGLVIK*PSLPTF
Trigger: AAAGGTGGGAAGAGAGGGCCATTTGATGACCAGGCC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTGGAACTAGAGCGGTaGCTGATGCCAAAATGGGAA +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCILELER*LMPKWE
Trigger: TTCCCATTTTGGCATCAGCCACCGCTCTAGTTCCAG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTATCTGTTTTACCAGACTCAAGTCTaGAAGCTTCTGAGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: FRVTCITVHSLGFASYLFYQTQV*KLLSFN
Trigger: ATTAAAGCTCAGAAGCTTCCAGACTTGAGTCTGGTA...AAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGACCTGATTGTGCCTTaGCAAGTTCCTGGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKDLIVP*QVPGAG
Trigger: TCCAGCACCAGGAACTTGCCAAGGCACAATCAGGTC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCAGACATTTTTCCTGTaGTCGCCATCATGCTATGCT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRQTFFL*SPSCYA
Trigger: AGCATAGCATGATGGCGACCACAGGAAAAATGTCTG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACAATTGGAGGTGTTCCTaGTTTGATATCAATGCCACT +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYNWRCS*FDINAT
Trigger: AGTGGCATTGATATCAAACCAGGAACACCTCCAATT...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGCTTCGACCACCAATTaGAGGTGTTCCTGGTTTGAT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYASTTN*RCSWFD
Trigger: ATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAAGAAGAACCGCTGCGTaGACTGAAGAACCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKRRTAA*TEEPLL
Trigger: GAGCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAAGTTGCTTTTCATCCTaGTCAGAGGAAGGTGACCCA +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGSCFSS*SEEGDP
Trigger: TGGGTCACCTTCCTCTGATCAGGATGAAAAGCAACT...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACATCATAGCTCTATACTaGGAAGCAAGTGCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYIIALY*EASAGC
Trigger: GCAACCTGCACTTGCTTCTCAGTATAGAGCTATGAT...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCGGAATCATTCCAGGATaGATGGGTGGAATGTCCATA +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETGIIPG*MGGMSI
Trigger: TATGGACATTCCACCCATTCATCCTGGAATGATTCC...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGAGCAACGTCCGTTTTTaGATGAGTTTCCAACTGACT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRSNVRF*MSFQLT
Trigger: AGTCAGTTGGAAACTCATTCAAAAACGGACGTTGCT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTCTCTTCCCACCTTTTaGTGGTGGGCCATTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTSLPTF*WWAISS
Trigger: AGAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAGGAGCTTGGATTTGCTaGGTCCCAGTAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGGAWIC*VPVACF
Trigger: AAAACAAGCTACTGGGACTCAGCAAATCCAAGCTCC...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAATTTTCATTCCCGTTTaGGGCCGGAGCACCAAACTG +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKIFIPV*GRSTKL
Trigger: CAGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAAT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCATACAGCTCAACTGTaGAAAGTGACTTGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYHTAQL*KVTCRR
Trigger: CCTTCTGCAAGTCACTTTTCACAGTTGAGCTGTATG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCGGATTTGAAGTCTGCTaGAAGGCAAGACCTGATTGT +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETGFEVC*KARPDC
Trigger: ACAATCAGGTCTTGCCTTTCAGCAGACTTCAAATCC...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACATACTGAGAAGCAAGTaGAGGTTGCTGTCCATTCAG +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYILRSK*RLLSIQ
Trigger: CTGAATGGACAGCAACCTGCACTTGCTTCTCAGTAT...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTACGAGCACGCTCTACTaGTGCAGATATTTCAGACTG +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTTSTLY*CRYFRL
Trigger: CAGTCTGAAATATCTGCAGCAGTAGAGCGTGCTCGT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGGTATAGGCATAAACTaGTCATGTCTTCTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYGIGIN*SCLLGG
Trigger: GCCACCAAGAAGACATGAGCAGTTTATGCCTATACC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAGGAATTCTTCTGTCCTaGACCATTAGGCACACCTTC +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGGILLS*TIRHTF
Trigger: GAAGGTGTGCCTAATGGTGCAGGACAGAAGAATTCC...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATGGGAAAGACTGCTCTaGATAAAGGCTGGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKWERLL*IKAGCD
Trigger: ATCGCAGCCAGCCTTTATGCAGAGCAGTCTTTCCCA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGTCGCCATCATGCTATaGTGTGTTCCAGCAGGGATT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKVAIML*CVPAGI
Trigger: AATCCCTGCTGGAACACAGCATAGCATGATGGCGAC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATACTGGCCCATGATTTaGGAGCAGGTGCTACTTCTG +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKYWPMI*EQVLLL
Trigger: CAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAGCTGCCTGCAGACTaGGAAATTCCTGCTGAAATT +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIQLPAD*EIPAEI
Trigger: AATTTCAGCAGGAATTTCCCAGTCTGCAGGCAGCTG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTTGGAGGGCGTAAACTaGGTCCAGGTCCATAGTTTT +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTLEGVN*VQVHSF
Trigger: AAAACTATGGACCTGGACCCAGTTTACGCCCTCCAA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACCTGCTGAAACATATATaGAGGCATCATAGCTCTATA +
Preference number: 4 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYLLKHI*RHHSSI
Trigger: TATAGAGCTATGATGCCTCCATATATGTTTCAGCAG...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAGGACTTTTTGTGACTaGAGGCTGAGCAGGTATCTG +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDARTFCD*RLSRYL
Trigger: CAGATACCTGCTCAGCCTCCAGTCACAAAAAGTCCT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTTCCTGATTAAATGGTaGTCCCTTCCCATAAGGACT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRFLIKW*SLPIRT
Trigger: AGTCCTTATGGGAAGGGACCACCATTTAATCAGGAA...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAATCGTTATCAGGTACTaGAGGCTTGGAGGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKIVIRY*RLGGKG
Trigger: CCCTTTCCCTCCAAGCCTCCAGTACCTGATAACGAT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACCATCATGAGCCACCTTaGGTCAAAACCCATAGAAGC +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNHHEPP*VKTHRS
Trigger: GCTTCTATGGGTTTTGACCCAAGGTGGCTCATGATG...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACTTCTTCTCTTCTGTTaGAGCTTGGTCTTGGACCCC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKLLLFC*SLVLDP
Trigger: GGGGTCCAAGACCAAGCTCCAACAGAAGAGAAGAAG...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTAATTCCTTCCTGATTTaGGTGGGCCATTGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTNSFLI*VGHCCH
Trigger: GTGGCAACAATGGCCCACCCAAATCAGGAAGGAATT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGTCATTCAGATTTGACTaGGGGTCTTCAATTACAGTT +
Preference number: 4 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCESFRFD*GSSITV
Trigger: AACTGTAATTGAAGACCCCCAGTCAAATCTGAATGA...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTCTGGCTCGACCTGCTaGGCATCTTTCACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTSGSTC*ASFTFL
Trigger: TAGAAAAGTGAAAGATGCCCAGCAGGTCGAGCCAGA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAAATTGGAGGTGTTCCTaGTTTGATATCAATGCCACT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRNWRCS*FDINAT
Trigger: AGTGGCATTGATATCAAACCAGGAACACCTCCAATT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTATCTGTTTTTCATTTTGCTAGACTaGCTGTTTGGACTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: FRVTCITVHSLGFASYLFFILLD*LFGLVD
Trigger: ATCAACAAGTCCAAACAGCCAGTCTAGCAAAATGAA...AAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR TCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGCTCATCATCATCACTaGAGTTCAGCTGTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTAHHHH*SSAVLC
Trigger: ACACAGAACAGCTGAACTTCAGTGATGATGATGAGC...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCGCATGGTTAGATCCATaGGAAACACTTCTTTTTCGG +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETAWLDP*ETLLFR
Trigger: CCGAAAAAGAAGTGTTTCTCATGGATCTAACCATGC...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCAACTCCAGGTCTCTaGCTAGAAAAACTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETSTPGL*LEKLLF
Trigger: GAAGAGAAGTTTTTCTAGTCAGAGACCTGGAGTTGA...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTATTGAGGTCAAACTGTaGCAGAGCATCTACTTTCTC +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLIEVKL*QSIYFL
Trigger: GAGAAAGTAGATGCTCTGTCACAGTTTGACCTCAAT...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCCACTTGCGTAATTATTaGGGTCAAACTGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETHLRNY*GQTVTE
Trigger: CTCTGTCACAGTTTGACCTCAATAATTACGCAAGTG...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGGAGCTTGGATTTGCTaGGTCCCAGTAGCTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKGAWIC*VPVACF
Trigger: AAAACAAGCTACTGGGACTCAGCAAATCCAAGCTCC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACTCAACACCACTCTCTTaGCCATTTCTTGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNSTPLS*PFLVPS
Trigger: AGAGGGAACAAGAAATGGTCAAGAGAGTGGTGTTGA...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGAGATTTGCTCTTGCCTaGAGAAGATGTGTATCAATC +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRRFALA*RRCVSI
Trigger: GATTGATACACATCTTCTTCAGGCAAGAGCAAATCT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCATGTTACAGACTCCTTTaGATCAGAGCCATACTCTGC +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDACYRLL*IRAILC
Trigger: GCAGAGTATGGCTCTGATGCAAAGGAGTCTGTAACA...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATATGTTACAGACTCCTTTaGATCAGAGCCATACTCTGC +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCICYRLL*IRAILC
Trigger: GCAGAGTATGGCTCTGATGCAAAGGAGTCTGTAACA...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAATTCAGTTTGGCCTGTaGAGGACCACAAGCTATTCT +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAIQFGL*RTTSYS
Trigger: AGAATAGCTTGTGGTCCTCCACAGGCCAAACTGAAT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAAAGTTCCTCTGGAGATaGCTGCTTTTCTATGATCCC +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIKFLWR*LLFYDP
Trigger: GGGATCATAGAAAAGCAGCCATCTCCAGAGGAACTT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTCTGTATCCTTGGTCTaGAAACCAATCCCTATCTCT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYSVSLV*KPIPIS
Trigger: AGAGATAGGGATTGGTTTCCAGACCAAGGATACAGA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGACGCAGGTGGATTAACTaGTTCTTGAACAACATTATT +
Preference number: 4 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRRRWIN*FLNNII
Trigger: AATAATGTTGTTCAAGAACCAGTTAATCCACCTGCG...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAGAAGAGGAAGGTGTaGTGTAGTCTGTTACAGACT +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTEKRKV*CSLLQT
Trigger: AGTCTGTAACAGACTACACCACACCTTCCTCTTCTC...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGACAGACATTTTTCCTGTaGTCGCCATCATGCTATGCT +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGQTFFL*SPSCYA
Trigger: AGCATAGCATGATGGCGACCACAGGAAAAATGTCTG...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGAATTGGAGGTGTTCCTaGTTTGATATCAATGCCACT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRNWRCS*FDINAT
Trigger: AGTGGCATTGATATCAAACCAGGAACACCTCCAATT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAGCAACGTCCGTTTTTaGATGAGTTTCCAACTGACT +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDASNVRF*MSFQLT
Trigger: AGTCAGTTGGAAACTCATTCAAAAACGGACGTTGCT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATATTATTGTCTCTATACTaGGGATACTCACGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCILLSLY*GYSRVC
Trigger: GCACACTCGTGAGTATCCTCAGTATAGAGACAATAA...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAATTGAGGTCAAACTGTaGCAGAGCATCTACTTTCTC +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAIEVKL*QSIYFL
Trigger: GAGAAAGTAGATGCTCTGTCACAGTTTGACCTCAAT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACACTTGCGTAATTATTaGGGTCAAACTGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIHLRNY*GQTVTE
Trigger: CTCTGTCACAGTTTGACCTCAATAATTACGCAAGTG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCACACTTGCGTAATTATTaGGGTCAAACTGTGACAGAG +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAHLRNY*GQTVTE
Trigger: CTCTGTCACAGTTTGACCTCAATAATTACGCAAGTG...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCATCATCATTCAGATTTaGCTGGGGGTCTTCAATTAC +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETIIIQI*LGVFNY
Trigger: GTAATTGAAGACCCCCAGTCAAATCTGAATGATGAT...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGGAAGCTTAGAAGTCTaGCTTCTTCCTTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAGSLEV*LLPFSP
Trigger: AGGTGAAAAAGGAAGAAGTCAGACTTCTAAGCTTCC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACGGAAGCTTAGAAGTCTaGCTTCTTCCTTTTTCACCT +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNGSLEV*LLPFSP
Trigger: AGGTGAAAAAGGAAGAAGTCAGACTTCTAAGCTTCC...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATCAACACCACTCTCTTaGCCATTTCTTGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKSTPLS*PFLVPS
Trigger: AGAGGGAACAAGAAATGGTCAAGAGAGTGGTGTTGA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGCCGGAGCACCAAACTaGATTGTGTCAATTCCAATT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKAGAPN*IVSIPI
Trigger: AATTGGAATTGACACAATTCAGTTTGGTGCTCCGGC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGCGCATGCTGCGTATTaGATAAATGACTTGTATCCA +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAAHAAY*INDLYP
Trigger: TGGATACAAGTCATTTATTCAATACGCAGCATGCGC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCGTTGAATTGAAGAACTaGATAATTCCTGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETVELKN*IIPEPV
Trigger: CACAGGCTCAGGAATTATTCAGTTCTTCAATTCAAC...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTCCAGAGTAAAGATTTaGGGCTTGAGTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYSRVKI*GLSKIC
Trigger: GCAAATCTTACTCAAGCCTCAAATCTTTACTCTGGA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGACTGGAACTGTTTCTaGTACACAACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLDWNCF*YTTLFI
Trigger: AATGAACAGTGTTGTGTATCAGAAACAGTTCCAGTC...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACGGACTAGTACTTCCTTaGTCATCATCATCACTGAAG +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNGLVLP*SSSSLK
Trigger: CTTCAGTGATGATGATGAGCAAGGAAGTACTAGTCC...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACTCTAACTCTTTCTCTTaGTGTCTTGCCCTCTCCATT +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNSNSFS*CLALSI
Trigger: AATGGAGAGGGCAAGACAGCAAGAGAAAGAGTTAGA...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATCTTTCTCCTTCCTCTaGTCTCGCTCCTCTTTCATA +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKSFSFL*SRSSFI
Trigger: TATGAAAGAGGAGCGAGAGCAGAGGAAGGAGAAAGA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTGCTTTGGTTTCTTTTaGTGTTTCAGGATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYCFGFF*CFRISA
Trigger: AGCACTGATCCTGAAACAGCAAAAGAAACCAAAGCA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGAGTATCCTCCATCTTTaGATTATTAGTAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRSILHL*IISSHS
Trigger: ACTGTGGCTACTAATAATGCAAAGATGGAGGATACT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATGGGATTTGAGCTGCTaGAGACTGAGACACATAAAC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKWDLSC*RLRHIN
Trigger: GTTTATGTGTCTCAGTCTGCAGCAGCTCAAATCCCA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACATCTGTTTGTTCTGTTaGTGTTCAGAGAAGAACCGC +
Preference number: 4 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNICLFC*CSEKNR
Trigger: GCGGTTCTTCTCTGAACAGCAACAGAACAAACAGAT...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAATCTGTTTGTTCTGTTaGTGTTCAGAGAAGAACCGC +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGICLFC*CSEKNR
Trigger: GCGGTTCTTCTCTGAACAGCAACAGAACAAACAGAT...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCATTCCTGATTAAATGGTaGTCCCTTCCCATAAGGACT +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAFLIKW*SLPIRT
Trigger: AGTCCTTATGGGAAGGGACCACCATTTAATCAGGAA...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTTGTTTTCACTTTCTTaGTTTTCTGTCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETLFSLS*FSVAGS
Trigger: AGAGCCTGCGACAGAAAACCAAGAAAGTGAAAACAA...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTTGTTTTCACTTTCTTaGTTTTCTGTCGCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYLFSLS*FSVAGS
Trigger: AGAGCCTGCGACAGAAAACCAAGAAAGTGAAAACAA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp CAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGAATGTTTAGAAACCGCTGCAACGCTTTGCTaGTTTACAGTTTTAACTACA +
Preference number: 4 (lower is better)
Translates to: QKTTDLKSLANVLECLETAATLC*FTVLTT
Trigger: TGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGC...GGTTTCTAAACATTCAAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAATCTACTTTCTCCTTTaGCTTCTTAGGACCCGGTTT +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGIYFLL*LLRTRF
Trigger: AAACCGGGTCCTAAGAAGCCAAAGGAGAAAGTAGAT...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTCATTCAGATTTGACTaGGGGTCTTCAATTACAGTT +
Preference number: 4 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRSFRFD*GSSITV
Trigger: AACTGTAATTGAAGACCCCCAGTCAAATCTGAATGA...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAATCCATATAGAAGGCTaGGATTTGAGCTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKIHIEG*DLSCCR
Trigger: TCTGCAGCAGCTCAAATCCCAGCCTTCTATATGGAT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACAGACATTTTTCCTGTaGTCGCCATCATGCTATGCT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKQTFFL*SPSCYA
Trigger: AGCATAGCATGATGGCGACCACAGGAAAAATGTCTG...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATTATTGTCTCTATACTaGGGATACTCACGAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKLLSLY*GYSRVC
Trigger: GCACACTCGTGAGTATCCTCAGTATAGAGACAATAA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATCAACTCCAGGTCTCTaGCTAGAAAAACTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKSTPGL*LEKLLF
Trigger: GAAGAGAAGTTTTTCTAGTCAGAGACCTGGAGTTGA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAATTGAGGTCAAACTGTaGCAGAGCATCTACTTTCTC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKIEVKL*QSIYFL
Trigger: GAGAAAGTAGATGCTCTGTCACAGTTTGACCTCAAT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAATCATCATTCAGATTTaGCTGGGGGTCTTCAATTAC +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIIIIQI*LGVFNY
Trigger: GTAATTGAAGACCCCCAGTCAAATCTGAATGATGAT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGCGCATGCTGCGTATTaGATAAATGACTTGTATCCA +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKAHAAY*INDLYP
Trigger: TGGATACAAGTCATTTATTCAATACGCAGCATGCGC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAAGATTTGCTCTTGCCTaGAGAAGATGTGTATCAATC +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGRFALA*RRCVSI
Trigger: GATTGATACACATCTTCTTCAGGCAAGAGCAAATCT...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGATCCAGAGTAAAGATTTaGGGCTTGAGTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGSRVKI*GLSKIC
Trigger: GCAAATCTTACTCAAGCCTCAAATCTTTACTCTGGA...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGACTGGAACTGTTTCTaGTACACAACACTGTTCATT +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIDWNCF*YTTLFI
Trigger: AATGAACAGTGTTGTGTATCAGAAACAGTTCCAGTC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCAAACAAACTGAGTGTTaGATACTTCTTCCCATCCTT +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETKQTEC*ILLPIL
Trigger: AAGGATGGGAAGAAGTATGCAACACTCAGTTTGTTT...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGCTTTCAGGTGTTTTTaGAGTTTGATCCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKAFRCF*SLILTA
Trigger: AGCAGTGAGGATCAAACTGCAAAAACACCTGAAAGC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTGCTTTGGTTTCTTTTaGTGTTTCAGGATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTCFGFF*CFRISA
Trigger: AGCACTGATCCTGAAACAGCAAAAGAAACCAAAGCA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCAGTATCCTCCATCTTTaGATTATTAGTAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETSILHL*IISSHS
Trigger: ACTGTGGCTACTAATAATGCAAAGATGGAGGATACT...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCAGTAAGATTTGCTCTTaGCTGAAGAAGATGTGTATC +
Preference number: 4 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETSKICS*LKKMCI
Trigger: GATACACATCTTCTTCAGGCAAGAGCAAATCTTACT...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATATTCTCTAAGTTCCTCTaGAGATGGCTGCTTTTCTAT +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIFSKFL*RWLLFY
Trigger: ATAGAAAAGCAGCCATCTCCAGAGGAACTTAGAGAA...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATATACCAGACTCAAGTCTaGAAGCTTCTGAGCTTTAAT +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIYQTQV*KLLSFN
Trigger: ATTAAAGCTCAGAAGCTTCCAGACTTGAGTCTGGTA...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAATCGTTCCTTTCCAATaGGACCAGGTTTATGTTCTT +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIIVPFQ*DQVYVL
Trigger: AAGAACATAAACCTGGTCCCATTGGAAAGGAACGAT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCATTTCGGAGACTGCTTTaGTTTCTTTTGCTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAFRRLL*FLLLFQ
Trigger: CTGAAACAGCAAAAGAAACCAAAGCAGTCTCCGAAA...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAAATTGGAGGTGTTCCTaGTTTGATATCAATGCCACT +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGNWRCS*FDINAT
Trigger: AGTGGCATTGATATCAAACCAGGAACACCTCCAATT...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTAATTGGAGGTGTTCCTaGTTTGATATCAATGCCACT +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTNWRCS*FDINAT
Trigger: AGTGGCATTGATATCAAACCAGGAACACCTCCAATT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTTCATTTTGCTAGACTaGCTGTTTGGACTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYFILLD*LFGLVD
Trigger: ATCAACAAGTCCAAACAGCCAGTCTAGCAAAATGAA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCATCAAAACAAGCAGACTaGGTATTTGTATCAACATGG +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDASKQAD*VFVSTW
Trigger: CCATGTTGATACAAATACTCAGTCTGCTTGTTTTGA...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR TCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAAGATTTTGTACTCAATaGAGAGGTAGTGTAAGTACC +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIRFCTQ*RGSVST
Trigger: GGTACTTACACTACCTCTTCATTGAGTACAAAATCT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGTTGAATTGAAGAACTaGATAATTCCTGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKVELKN*IIPEPV
Trigger: CACAGGCTCAGGAATTATTCAGTTCTTCAATTCAAC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR TCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATCCAGAGTAAAGATTTaGGGCTTGAGTAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKSRVKI*GLSKIC
Trigger: GCAAATCTTACTCAAGCCTCAAATCTTTACTCTGGA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTAATTCCATGATCTCTTaGAGATCTAGCTATATGCTC +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTNSMIS*RSSYML
Trigger: GAGCATATAGCTAGATCTGCAAGAGATCATGGAATT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAAGTAAGATTTGCTCTTaGCTGAAGAAGATGTGTATC +
Preference number: 4 (lower is better)
Translates to: MLLRTKLYALTDCLRTCISKICS*LKKMCI
Trigger: GATACACATCTTCTTCAGGCAAGAGCAAATCTTACT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAGTAAGATTTGCTCTTaGCTGAAGAAGATGTGTATC +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDASKICS*LKKMCI
Trigger: GATACACATCTTCTTCAGGCAAGAGCAAATCTTACT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCATTTATAGACTTTCTCTaGTTTAGGCCCTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAFIDFL*FRPFRR
Trigger: TCTTCTGAAGGGCCTAAACCAGAGAAAGTCTATAAA...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGATCATTCAGATTTGACTaGGGGTCTTCAATTACAGTT +
Preference number: 4 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGSFRFD*GSSITV
Trigger: AACTGTAATTGAAGACCCCCAGTCAAATCTGAATGA...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTCATTCAGATTTGACTaGGGGTCTTCAATTACAGTT +
Preference number: 4 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTSFRFD*GSSITV
Trigger: AACTGTAATTGAAGACCCCCAGTCAAATCTGAATGA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAATCGTTCCTTTCCAATaGGACCAGGTTTATGTTCTT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKIVPFQ*DQVYVL
Trigger: AAGAACATAAACCTGGTCCCATTGGAAAGGAACGAT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAAATTCCATGATCTCTTaGAGATCTAGCTATATGCTC +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKNSMIS*RSSYML
Trigger: GAGCATATAGCTAGATCTGCAAGAGATCATGGAATT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR GCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAAGTATCCTCCATCTTTaGATTATTAGTAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKSILHL*IISSHS
Trigger: ACTGTGGCTACTAATAATGCAAAGATGGAGGATACT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACGCAGGTGGATTAACTaGTTCTTGAACAACATTATT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKRRWIN*FLNNII
Trigger: AATAATGTTGTTCAAGAACCAGTTAATCCACCTGCG...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CCA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATTCATTTTGCTAGACTaGCTGTTTGGACTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKFILLD*LFGLVD
Trigger: ATCAACAAGTCCAAACAGCCAGTCTAGCAAAATGAA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 90 bp CCGCTGCGTGGACTGAAGAACCTCTGCTCTCTGCTTTGCCTGGGGTaGAAACTGTGCAGGAAACGGCTGTGCCATGCGCACTGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: PLRGLKNLCSLLCLG*KLCRKRLCHAHCGG
Trigger: CCCGCCACAGTGCGCATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAGGCAAAGCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS CCA 90 bp GAGGCCTGTGGTCAGCGGAGGAGGCATCTGACTGGCCAGTGCCATTaGTGGCCTCTGTACAGGCGCTGGGAAGGTGTTAGTATGTGGGGC +
Preference number: 5 (lower is better)
Translates to: EACGQRRRHLTGQCH*WPLYRRWEGVSMWG
Trigger: GCCCCACATACTAACACCTTCCCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGTCAGATGCCTCCTCCGCTGACCACAGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS TCA 90 bp AAACGAGCATGGCTCATGAGGCCTGTGGTCAGCGGAGGAGGCATCTaGCTGGCCAGTGCCATTGGTGGCCTCTGTACAGGCGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: KRAWLMRPVVSGGGI*LASAIGGLCTGAGK
Trigger: CTTCCCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGTCAGATGCCTCCTCCGCTGACCACAGGCCTCATGAGCCATGCTCGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CCA 90 bp GCCTGTGGTCAGCGGAGGAGGCATCTGACTGGCCAGTGCCATTGGTaGCCTCTGTACAGGCGCTGGGAAGGTGTTAGTATGTGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: ACGQRRRHLTGQCHW*PLYRRWEGVSMWGS
Trigger: AGAGCCCCACATACTAACACCTTCCCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGTCAGATGCCTCCTCCGCTGACCACAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS TCA 90 bp ATCCACAAGGACCCCTGGCTACATGTGGCAAACGAGCATGGCTCATaGGGCCTGTGGTCAGCGGAGGAGGCATCTGACTGGCCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: IHKDPWLHVANEHGS*GLWSAEEASDWPVP
Trigger: TGGCACTGGCCAGTCAGATGCCTCCTCCGCTGACCACAGGCCTCATGAGCCATGCTCGTTTGCCACATGTAGCCAGGGGTCCTTGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS GCA 90 bp GCGGCCTCTCTCTCTCTCAGCCGTCTAAATCGAGGTGGCTTATCTTaGCTTGGTGGTCGGGTAGGTCGCTGCCTTCGGGGCCTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: AASLSLSRLNRGGLS*LGGRVGRCLRGLSL
Trigger: TAGAGAGAGGCCCCGAAGGCAGCGACCTACCCGACCACCAAGGCAAGATAAGCCACCTCGATTTAGACGGCTGAGAGAGAGAGAGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 90 bp GCTCATGAGGCCTGTGGTCAGCGGAGGAGGCATCTGACTGGCCAGTaGCATTGGTGGCCTCTGTACAGGCGCTGGGAAGGTGTTAGTATG +
Preference number: 5 (lower is better)
Translates to: AHEACGQRRRHLTGQ*HWWPLYRRWEGVSM
Trigger: CATACTAACACCTTCCCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGTCAGATGCCTCCTCCGCTGACCACAGGCCTCATGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTCTCTTCTGTTGGAGCTaGGTCTTGGACCCCACCGAG +
Preference number: 5 (lower is better)
Translates to: VTPEVRACGASLCSSSVTLFCWS*VLDPTE
Trigger: CTCGGTGGGGTCCAAGACCAAGCTCCAACAGAAGAG...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGCGCGGAGGGTGGAGCTaGGATTTGCTGAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALRGGWS*DLLSPS
Trigger: ACTGGGACTCAGCAAATCCAAGCTCCACCCTCCGCG...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGGCTTGGTGCTGCCCTaGCAGTGGGGCATAGATAGG +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALGLVLP*QWGIDR
Trigger: CCTATCTATGCCCCACTGCAAGGGCAGCACCAAGCC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCAAACTCAGCTGGGCTaGGTGCTGCCCTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSQTQLG*VLPLQW
Trigger: CCACTGCAAGGGCAGCACCAAGCCCAGCTGAGTTTG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 90 bp TGTCTTGGAAGCGGCCTCTCTCTCTCTCAGCCGTCTAAATCGAGGTaGCTTATCTTGCCTTGGTGGTCGGGTAGGTCGCTGCCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: CLGSGLSLSQPSKSR*LILPWWSGRSLPSG
Trigger: CCCCGAAGGCAGCGACCTACCCGACCACCAAGGCAAGATAAGCCACCTCGATTTAGACGGCTGAGAGAGAGAGAGGCCGCTTCCAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGATTTGGGTGGGCCATaGTTGCCACGACGATTCTGG +
Preference number: 5 (lower is better)
Translates to: VTPEVRACGASLCSSSVTDLGGP*LPRRFW
Trigger: CCAGAATCGTCGTGGCAACAATGGCCCACCCAAATC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCGAGCCGAGGCTGAGGTaGGAACTGGAGCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVEPRLR*ELELGM
Trigger: CATGCCCAGCTCCAGTTCCAACCTCAGCCTCGGCTC...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTGGGCTGGGTTTCTCTaGTCCTTCTGGCTCGACCTG +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSWAGFL*SFWLDL
Trigger: CAGGTCGAGCCAGAAGGACAAGAGAAACCCAGCCCA...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCTGCGAGAGACCAGGTaGGAAGCCCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCLRETR*EALLLS
Trigger: GCTCAGCAGCAGGGCTTCCAACCTGGTCTCTCGCAG...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS TCA 90 bp CTGCCCTTGCAGTGGGGCATAGATAGGGATTGGAATCTGCTGAACTaGTGTCGGCTGCGAGAGACCAGGTTGGAAGCCCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LPLQWGIDRDWNLLN*CRLRETRLEALLLS
Trigger: GCTCAGCAGCAGGGCTTCCAACCTGGTCTCTCGCAGCCGACATCAGTTCAGCAGATTCCAATCCCTATCTATGCCCCACTGCAAGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 90 bp TTAGACGGCTGTGAGGGCACAGTCTGTGGAAGCACACCTTGCTGCTaGTGCTGCTGCTGCTGCTGCCACTGTTGCTGTTTCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LDGCEGTVCGSTPCC*CCCCCCHCCCFICS
Trigger: GGAGCAGATGAAACAGCAACAGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGTGTGCTTCCACAGACTGTGCCCTCACAGCCGTCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 90 bp TCTTACCAATGGAGGGACCAGGTTAGGCTGAGAGAGAATCTGGGGTaGAAACTGTGCAGGAAACGGCTGTGCCATGCGCACTGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: SYQWRDQVRLRENLG*KLCRKRLCHAHCGG
Trigger: CCCGCCACAGTGCGCATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAGATTCTCTCTCAGCCTAACCTGGTCCCTCCATTGGTAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CCA 90 bp CACCTCTGCCACGACCCCCATAAGAGCCTCTATAGCTCCGACCTCTaGAGTAATACTCGCCTCTGCCTCGGCCTCTGTATCCTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: HLCHDPHKSLYSSDL*SNTRLCLGLCILGL
Trigger: CAGACCAAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACTCCAGAGGTCGGAGCTATAGAGGCTCTTATGGGGGTCGTGGCAGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 90 bp AGGCATCTGACTGGCCAGTGCCATTGGTGGCCTCTGTACAGGCGCTaGGAAGGTGTTAGTATGTGGGGCTCTTACCAATGGAGGGACCAG +
Preference number: 5 (lower is better)
Translates to: RHLTGQCHWWPLYRR*EGVSMWGSYQWRDQ
Trigger: CTGGTCCCTCCATTGGTAAGAGCCCCACATACTAACACCTTCCCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGTCAGATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGGAGGGAAAGGGGCCTaGTCTTCCAGGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVGGKGA*SSRYLS
Trigger: CGACAAATACCTGGAAGACAAGGCCCCTTTCCCTCC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGGAGGGAAAGGGGCCTaGTCTTCCAGGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSGGKGA*SSRYLS
Trigger: CGACAAATACCTGGAAGACAAGGCCCCTTTCCCTCC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCCTGCTGCTGCCACTGTaGCTGTTTCATCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVLLLPL*LFHLLL
Trigger: CAGGAGCAGATGAAACAGCAACAGTGGCAGCAGCAG...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCTGCTGCTGCCACTGTaGCTGTTTCATCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSLLLPL*LFHLLL
Trigger: CAGGAGCAGATGAAACAGCAACAGTGGCAGCAGCAG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTCTCTTCTGTTGGAGCTaGGTCTTGGACCCCACCGAG +
Preference number: 5 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFLFCWS*VLDPTE
Trigger: CTCGGTGGGGTCCAAGACCAAGCTCCAACAGAAGAG...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGGCTGGAGCAGCCACTTaGCTGTCCCATAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALAGAAT*LSHNSA
Trigger: AGCTGAGTTATGGGACAGCAAAGTGGCTGCTCCAGC...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCAAACTCAGCTGGGCTaGGTGCTGCCCTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAQTQLG*VLPLQW
Trigger: CCACTGCAAGGGCAGCACCAAGCCCAGCTGAGTTTG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGAAAGGCTGGCTTACTaGGGCAGGACGGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSERLAY*GRTAQT
Trigger: AGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTTC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGACTGGCCAGTGCCATaGGTGGCCTCTGTACAGGCG +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPDWPVP*VASVQA
Trigger: CGCCTGTACAGAGGCCACCAATGGCACTGGCCAGTC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS TCA 90 bp CACTTGGATTCCATCTCCTTGCCCACCTTGCTTGTTACTGGCCCATaGTTTGGGAGCAGGTGCTACTTCTGGGGGAGCTGCAACCCCAGG +
Preference number: 5 (lower is better)
Translates to: HLDSISLPTLLVTGP*FGSRCYFWGSCNPR
Trigger: CCTGGGGTTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 90 bp AGCCTTCAACGCAGCCTGGGCCTGATTACCTCTGACTCCAGACAGTaGTCCACAAGGACCCCTGGCTACATGTGGCAAACGAGCATGGCT +
Preference number: 5 (lower is better)
Translates to: SLQRSLGLITSDSRQ*STRTPGYMWQTSMA
Trigger: AGCCATGCTCGTTTGCCACATGTAGCCAGGGGTCCTTGTGGATCACTGTCTGGAGTCAGAGGTAATCAGGCCCAGGCTGCGTTGAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CCA 90 bp GGATTCCATCTCCTTGCCCACCTTGCTTGTTACTGGCCCATGATTTaGGAGCAGGTGCTACTTCTGGGGGAGCTGCAACCCCAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: GFHLLAHLACYWPMI*EQVLLLGELQPQVW
Trigger: CCAAACCTGGGGTTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGATGGAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 90 bp GCCTTGTGTTCCACTGATTGTCTCGATAAGCAGGTCTTCTTAAGGTaGCAGGACGTGATGGCCGGCCTCCAGGATCCCTTCCACCTCGTC +
Preference number: 5 (lower is better)
Translates to: ALCSTDCLDKQVFLR*QDVMAGLQDPFHLV
Trigger: GACGAGGTGGAAGGGATCCTGGAGGCCGGCCATCACGTCCTGCCACCTTAAGAAGACCTGCTTATCGAGACAATCAGTGGAACACAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 90 bp CCTGGGGTGCAAACTGTGCAGGAAACGGCTGTGCCATGCGCACTGTaGCGGGGGCTGACTGGAACTGTTTCTGATACACAACACTGTTCA +
Preference number: 5 (lower is better)
Translates to: PGVQTVQETAVPCAL*RGLTGTVSDTQHCS
Trigger: TGAACAGTGTTGTGTATCAGAAACAGTTCCAGTCAGCCCCCGCCACAGTGCGCATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCCCATCCTTGGCTTTaGTGCTCTGGCCTGACTTCT +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALSHPWL*CSGLTS
Trigger: AGAAGTCAGGCCAGAGCACAAAAGCCAAGGATGGGA...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTAGAAGCAAGTGCAGGTaGCTGTCCATTCAGTTTGGC +
Preference number: 5 (lower is better)
Translates to: VTPEVRACGASLCSSSVTRSKCR*LSIQFG
Trigger: GCCAAACTGAATGGACAGCAACCTGCACTTGCTTCT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGAGGTTCTGCCTGCCTaGTGTTCCACTGATTGTCTC +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVEVLPA*CSTDCL
Trigger: GAGACAATCAGTGGAACACAAGGCAGGCAGAACCTC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGAGGTTCTGCCTGCCTaGTGTTCCACTGATTGTCTC +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSEVLPA*CSTDCL
Trigger: GAGACAATCAGTGGAACACAAGGCAGGCAGAACCTC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACGCGGAGGGTGGAGCTaGGATTTGCTGAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPRGGWS*DLLSPS
Trigger: ACTGGGACTCAGCAAATCCAAGCTCCACCCTCCGCG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTTGGGCTGGGTTTCTCTaGTCCTTCTGGCTCGACCTG +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAWAGFL*SFWLDL
Trigger: CAGGTCGAGCCAGAAGGACAAGAGAAACCCAGCCCA...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTACTGTGAAAAGTGACTaGCAGAAGGTAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VTPEVRACGASLCSSSVTTVKSD*QKVGCW
Trigger: CCAGCAGCCTACCTTCTGCAAGTCACTTTTCACAGT...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGCTGCGAGAGACCAGGTaGGAAGCCCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKLRETR*EALLLS
Trigger: GCTCAGCAGCAGGGCTTCCAACCTGGTCTCTCGCAG...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGGCTTGGTGCTGCCCTaGCAGTGGGGCATAGATAGG +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPGLVLP*QWGIDR
Trigger: CCTATCTATGCCCCACTGCAAGGGCAGCACCAAGCC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGCAAACTCAGCTGGGCTaGGTGCTGCCCTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLQTQLG*VLPLQW
Trigger: CCACTGCAAGGGCAGCACCAAGCCCAGCTGAGTTTG...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS CCA 90 bp GGAGCAGCCACTTTGCTGTCCCATAACTCAGCTGTTAGAGAGCCATaGGACTGTGAAGTGGGCATGGACTTCCCAGCGGCTACGAAGTCT +
Preference number: 5 (lower is better)
Translates to: GAATLLSHNSAVREP*DCEVGMDFPAATKS
Trigger: AGACTTCGTAGCCGCTGGGAAGTCCATGCCCACTTCACAGTCCCATGGCTCTCTAACAGCTGAGTTATGGGACAGCAAAGTGGCTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 90 bp TCTGGGGTGCAAACTGTGCAGGAAACGGCTGTGCCATGCGCACTGTaGCGGGGGCTGACTGGAACTGTTTCTGATACACAACACTGTTCA +
Preference number: 5 (lower is better)
Translates to: SGVQTVQETAVPCAL*RGLTGTVSDTQHCS
Trigger: TGAACAGTGTTGTGTATCAGAAACAGTTCCAGTCAGCCCCCGCCACAGTGCGCATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTTACTGGCCCATGATTaGGGAGCAGGTGCTACTTCT +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVLLAHD*GAGATS
Trigger: AGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTGTTGTGCAAGCAACTaGGGAGGTGGTGGCAAGTGT +
Preference number: 5 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFCCASN*GGGGKC
Trigger: ACACTTGCCACCACCTCCCAAGTTGCTTGCACAACA...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGAGGTGGGGGATGCTGTaGTGCAAGCAACTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLRWGML*CKQLGR
Trigger: CCTCCCAAGTTGCTTGCACAACAGCATCCCCCACCT...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGGCTTGACAGGTTTTTaGTTCTCAGGCCGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVGLTGF*FSGRSS
Trigger: AGAGGAACGGCCTGAGAACAAAAAACCTGTCAAGCC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTGAGGTTCTGCCTGCCTaGTGTTCCACTGATTGTCTC +
Preference number: 5 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFEVLPA*CSTDCL
Trigger: GAGACAATCAGTGGAACACAAGGCAGGCAGAACCTC...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCGAGGTGGCTTATCTaGCCTTGGTGGTCGGGTAGG +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPSRWLI*PWWSGR
Trigger: CCTACCCGACCACCAAGGCAAGATAAGCCACCTCGA...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCGATTTGGGTGGGCCATaGTTGCCACGACGATTCTGG +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVDLGGP*LPRRFW
Trigger: CCAGAATCGTCGTGGCAACAATGGCCCACCCAAATC...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTCCAGTAGCTTGTTTTTaGGCAAACCTTGGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: VTPEVRACGASLCSSSVTPVACF*ANLGGS
Trigger: GCTTCCTCCAAGGTTTGCCAAAAAACAAGCTACTGG...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGCGCGGAGGGTGGAGCTaGGATTTGCTGAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKRGGWS*DLLSPS
Trigger: ACTGGGACTCAGCAAATCCAAGCTCCACCCTCCGCG...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTGAGCCGAGGCTGAGGTaGGAACTGGAGCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: LSVSGLLVSLSTLWVLPPEPRLR*ELELGM
Trigger: CATGCCCAGCTCCAGTTCCAACCTCAGCCTCGGCTC...AGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGCTGGAGCAGCCACTTaGCTGTCCCATAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAAGAAT*LSHNSA
Trigger: AGCTGAGTTATGGGACAGCAAAGTGGCTGCTCCAGC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGGCTTGGTGCTGCCCTaGCAGTGGGGCATAGATAGG +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPGLVLP*QWGIDR
Trigger: CCTATCTATGCCCCACTGCAAGGGCAGCACCAAGCC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGGCTTGGTGCTGCCCTaGCAGTGGGGCATAGATAGG +
Preference number: 5 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVGLVLP*QWGIDR
Trigger: CCTATCTATGCCCCACTGCAAGGGCAGCACCAAGCC...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGCAAACTCAGCTGGGCTaGGTGCTGCCCTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVQTQLG*VLPLQW
Trigger: CCACTGCAAGGGCAGCACCAAGCCCAGCTGAGTTTG...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCACCTCTGCTCTCTGCTTaGCCTGGGGTGCAAACTGTG +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPPLLSA*PGVQTV
Trigger: CACAGTTTGCACCCCAGGCAAAGCAGAGAGCAGAGG...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCTCTGCTCTCTGCTTaGCCTGGGGTGCAAACTGTG +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHPLLSA*PGVQTV
Trigger: CACAGTTTGCACCCCAGGCAAAGCAGAGAGCAGAGG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTCCTCTGCTCTCTGCTTaGCCAACACCTAGGACCAAA +
Preference number: 5 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFPLLSA*PTPRTK
Trigger: TTTGGTCCTAGGTGTTGGCAAAGCAGAGAGCAGAGG...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS TCA 90 bp TCAGATCTTGTTCAGCCTTCAACGCAGCCTGGGCCTGATTACCTCTaGCTCCAGACAGTGATCCACAAGGACCCCTGGCTACATGTGGCA +
Preference number: 5 (lower is better)
Translates to: SDLVQPSTQPGPDYL*LQTVIHKDPWLHVA
Trigger: TGCCACATGTAGCCAGGGGTCCTTGTGGATCACTGTCTGGAGTCAGAGGTAATCAGGCCCAGGCTGCGTTGAAGGCTGAACAAGATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS TCA 90 bp TGCTTTGCCTTCAGATCTTGTTCAGCCTTCAACGCAGCCTGGGCCTaGTTACCTCTGACTCCAGACAGTGATCCACAAGGACCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: CFAFRSCSAFNAAWA*LPLTPDSDPQGPLA
Trigger: AGCCAGGGGTCCTTGTGGATCACTGTCTGGAGTCAGAGGTAATCAGGCCCAGGCTGCGTTGAAGGCTGAACAAGATCTGAAGGCAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028016.16
ENSMUST00000182660.8
CDS TCA 90 bp GCTCTCTTCTTCAGATCTTGTTCAGCCTTCAACGCAGCCTGGGCCTaGTTACCTCTGACTCCAGACAGTGATCCACAAGGACCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: ALFFRSCSAFNAAWA*LPLTPDSDPQGPLA
Trigger: AGCCAGGGGTCCTTGTGGATCACTGTCTGGAGTCAGAGGTAATCAGGCCCAGGCTGCGTTGAAGGCTGAACAAGATCTGAAGAAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS CCA 90 bp CTGTACAGGCGCTGGGAAGGTGTTAGTATGTGGGGCTCTTACCAATaGAGGGACCAGGTTAGGCTGAGAGAGAATCTGGGGTGCAAACTG +
Preference number: 5 (lower is better)
Translates to: LYRRWEGVSMWGSYQ*RDQVRLRENLGCKL
Trigger: CAGTTTGCACCCCAGATTCTCTCTCAGCCTAACCTGGTCCCTCCATTGGTAAGAGCCCCACATACTAACACCTTCCCAGCGCCTGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CCA 90 bp TGCCATTGGTGGCCTCTGTACAGGCGCTGGGAAGGTGTTAGTATGTaGGGCTCTTACCAATGGAGGGACCAGGTTAGGCTGAGAGAGAAT +
Preference number: 5 (lower is better)
Translates to: CHWWPLYRRWEGVSM*GSYQWRDQVRLREN
Trigger: ATTCTCTCTCAGCCTAACCTGGTCCCTCCATTGGTAAGAGCCCCACATACTAACACCTTCCCAGCGCCTGTACAGAGGCCACCAATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTTCCCATCCTTGGCTTTaGTGCTCTGGCCTGACTTCT +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAASHPWL*CSGLTS
Trigger: AGAAGTCAGGCCAGAGCACAAAAGCCAAGGATGGGA...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCTCTACAACAGGCTCTaGGGGTTCAACTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSLYNRL*GFNFFL
Trigger: GAGGAAAAAGTTGAACCCCAAGAGCCTGTTGTAGAG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTGTTGTTTTCACTTTCTaGGTTTTCTGTCGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: VTPEVRACGASLCSSSVTVVFTF*VFCRRL
Trigger: GAGCCTGCGACAGAAAACCAAGAAAGTGAAAACAAC...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCAGACGGCTCATTTCTTaGTTCCTCTGCATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVRRLIS*FLCILS
Trigger: GCTCAGAATGCAGAGGAACAAAGAAATGAGCCGTCT...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATGTTGGAGCTTGGTCTaGGACCCCACCGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQCWSLV*DPTEFL
Trigger: CAGAAACTCGGTGGGGTCCAAGACCAAGCTCCAACA...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGATTTGGGTGGGCCATaGTTGCCACGACGATTCTGG +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHDLGGP*LPRRFW
Trigger: CCAGAATCGTCGTGGCAACAATGGCCCACCCAAATC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGAAATTCCTTCCTGATTaGGGTGGGCCATTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALKFLPD*GGPLLP
Trigger: TGGCAACAATGGCCCACCCAAATCAGGAAGGAATTT...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCAAATTCCTTCCTGATTaGGGTGGGCCATTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSKFLPD*GGPLLP
Trigger: TGGCAACAATGGCCCACCCAAATCAGGAAGGAATTT...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCATACCTGTACGACTaGCTCTTCCTTCTTTCGGCG +
Preference number: 5 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCPYLYD*LFLLSA
Trigger: CGCCGAAAGAAGGAAGAGCAAGTCGTACAGGTATGG...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCCCATACCTGTACGACTaGCTCTTCCTTCTTTCGGCG +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVPYLYD*LFLLSA
Trigger: CGCCGAAAGAAGGAAGAGCAAGTCGTACAGGTATGG...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGCCAGTAGCTTGTTTTTaGGCAAACCTTGGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALPVACF*ANLGGS
Trigger: GCTTCCTCCAAGGTTTGCCAAAAAACAAGCTACTGG...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCCCAGTAGCTTGTTTTTaGGCAAACCTTGGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVPVACF*ANLGGS
Trigger: GCTTCCTCCAAGGTTTGCCAAAAAACAAGCTACTGG...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGCTGGAGCAGCCACTTaGCTGTCCCATAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHAGAAT*LSHNSA
Trigger: AGCTGAGTTATGGGACAGCAAAGTGGCTGCTCCAGC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTCATTTTCATTCCCGTTaGAGGCCGGAGCACCAAACT +
Preference number: 5 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFHFHSR*RPEHQT
Trigger: AGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAATG...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAGAAAGGCTGGCTTACTaGGGCAGGACGGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPERLAY*GRTAQT
Trigger: AGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTTC...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGAAAGGCTGGCTTACTaGGGCAGGACGGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQERLAY*GRTAQT
Trigger: AGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTTC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCTAGGACCAAATGTCTaGTGGCTGAGTCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAALGPNV*WLSPLP
Trigger: GGGAAGAGGACTCAGCCACAAGACATTTGGTCCTAG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS TCA 90 bp GGCATGGACTTCCCAGCGGCTACGAAGTCTGTGCCATTAGACGTCTaGGCTGAGGGTAATCTAATCGAGGGTGGTGGCTGCTTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: GMDFPAATKSVPLDV*AEGNLIEGGGCFED
Trigger: ATCTTCAAAGCAGCCACCACCCTCGATTAGATTACCCTCAGCTCAGACGTCTAATGGCACAGACTTCGTAGCCGCTGGGAAGTCCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 90 bp GCATCCTTGGAATTCTTCTGTCCTGCACCATTAGGCACACCTTCTTaGTGGTGTGCAGAGTTACCACTGACAGGGTCAGCACCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: ASLEFFCPAPLGTPS*WCAELPLTGSAPAV
Trigger: CACAGCTGGTGCTGACCCTGTCAGTGGTAACTCTGCACACCACCAAGAAGGTGTGCCTAATGGTGCAGGACAGAAGAATTCCAAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTTCTTCATGTTGCTCTaGTTTCGATGCCCATCCTGT +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALFFMLL*FRCPSC
Trigger: ACAGGATGGGCATCGAAACAAGAGCAACATGAAGAA...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACCTTGCCCACCTTGCTaGTTACTGGCCCATGATTTG +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPPCPPC*LLAHDL
Trigger: CAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTTCATCCTGGCCAAGTaGCTTTTCATCCTGATCAGA +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALFILAK*LFILIR
Trigger: TCTGATCAGGATGAAAAGCAACTTGGCCAGGATGAA...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTTCATCCTGGCCAAGTaGCTTTTCATCCTGATCAGA +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVFILAK*LFILIR
Trigger: TCTGATCAGGATGAAAAGCAACTTGGCCAGGATGAA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTAGAAGCAAGTGCAGGTaGCTGTCCATTCAGTTTGGC +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAARSKCR*LSIQFG
Trigger: GCCAAACTGAATGGACAGCAACCTGCACTTGCTTCT...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGTTGTGCAAGCAACTaGGGAGGTGGTGGCAAGTGT +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPCCASN*GGGGKC
Trigger: ACACTTGCCACCACCTCCCAAGTTGCTTGCACAACA...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTGTTGTGCAAGCAACTaGGGAGGTGGTGGCAAGTGT +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHCCASN*GGGGKC
Trigger: ACACTTGCCACCACCTCCCAAGTTGCTTGCACAACA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTGTCTTCCAGGTATTaGTCGATCTGGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPLSSRY*SIWRWG
Trigger: CCCCCACCTCCAGATCGACAAATACCTGGAAGACAA...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTGCTTCTTGTACCACTaGTGTGGTCTCCTTTTCACT +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVCFLYH*CGLLFT
Trigger: AGTGAAAAGGAGACCACACAAGTGGTACAAGAAGCA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCACTCTTCTGTTGGAGCTaGGTCTTGGACCCCACCGAG +
Preference number: 5 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASLFCWS*VLDPTE
Trigger: CTCGGTGGGGTCCAAGACCAAGCTCCAACAGAAGAG...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATCGGCCTCTGTATCCTaGGTCTGGAAACCAATCCCT +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPSASVS*VWKPIP
Trigger: AGGGATTGGTTTCCAGACCAAGGATACAGAGGCCGA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTCGGCCTCTGTATCCTaGGTCTGGAAACCAATCCCT +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHSASVS*VWKPIP
Trigger: AGGGATTGGTTTCCAGACCAAGGATACAGAGGCCGA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCGGCCTCTGTATCCTaGGTCTGGAAACCAATCCCT +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPSASVS*VWKPIP
Trigger: AGGGATTGGTTTCCAGACCAAGGATACAGAGGCCGA...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCTCTGTCGCCTTCTTTaGGGAACAACCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSLCRLL*GTTSKS
Trigger: TGATTTTGAGGTTGTTCCCAAAAGAAGGCGACAGAG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGGCCGTTCCTCTCTTTaGGGAAGTTTCCCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAGRSSL*GSFPLL
Trigger: AAGCAAAGGGAAACTTCCCAAAAGAGAGGAACGGCC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGGCTTGACAGGTTTTTaGTTCTCAGGCCGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAGLTGF*FSGRSS
Trigger: AGAGGAACGGCCTGAGAACAAAAAACCTGTCAAGCC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTTCGCTATTTCCCTTTTaGGAGGCAAAACACTTTCAC +
Preference number: 5 (lower is better)
Translates to: VTPEVRACGASLCSSSVTSLFPF*EAKHFH
Trigger: GTGAAAGTGTTTTGCCTCCAAAAAGGGAAATAGCGA...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCTTCAACACCACTCTCTaGACCATTTCTTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVFNTTL*TISCSL
Trigger: GAGGGAACAAGAAATGGTCAAGAGAGTGGTGTTGAA...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTTCAACACCACTCTCTaGACCATTTCTTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALFNTTL*TISCSL
Trigger: GAGGGAACAAGAAATGGTCAAGAGAGTGGTGTTGAA...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGCTGCTTTGGTTTCTTTaGCTGTTTCAGGATCAGTGC +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALLLWFL*LFQDQC
Trigger: GCACTGATCCTGAAACAGCAAAAGAAACCAAAGCAG...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCGAGAGCACTGGGGGATaGGGCAGTGTTATAAAAATT +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSESTGG*GSVIKI
Trigger: AATTTTTATAACACTGCCCAATCCCCCAGTGCTCTC...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTTGCCTCCTATCTGTTaGTTCTGTTGCTGTTCAGAG +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSLPPIC*FCCCSE
Trigger: CTCTGAACAGCAACAGAACAAACAGATAGGAGGCAA...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGTGCAGACTCCATCTTaGCATCAGAGCCATACTCTG +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAVQTPS*HQSHTL
Trigger: CAGAGTATGGCTCTGATGCAAAGATGGAGTCTGCAC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183223.8
CDS TCA 90 bp GGTCCTGAAGGCACATGTTCTGTTCTTGGCTTATTGTCTCTATACTaGGGATACTCACGAGTGTGCCCTCTACCACCTCTGCCACGACCC +
Preference number: 5 (lower is better)
Translates to: GPEGTCSVLGLLSLY*GYSRVCPLPPLPRP
Trigger: GGGTCGTGGCAGAGGTGGTAGAGGGCACACTCGTGAGTATCCTCAGTATAGAGACAATAAGCCAAGAACAGAACATGTGCCTTCAGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 90 bp CATAAGAGCCTCTATAGCTCCGACCTCTGGAGTAATACTCGCCTCTaGCTCGGCCTCTGTATCCTTGGTCTGGAAACCAATCCCTATCTC +
Preference number: 5 (lower is better)
Translates to: HKSLYSSDLWSNTRL*LGLCILGLETNPYL
Trigger: GAGATAGGGATTGGTTTCCAGACCAAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACTCCAGAGGTCGGAGCTATAGAGGCTCTTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 90 bp TTCTACCAGACTCAAGTCTGGAAGCTTCTGAGCTTTAATGGGCCCTaGCCGAGGCTGCTTCTGCCGCTGCTCTTTAGGTTCAGGAACTTT +
Preference number: 5 (lower is better)
Translates to: FYQTQVWKLLSFNGP*PRLLLPLLFRFRNF
Trigger: AAAGTTCCTGAACCTAAAGAGCAGCGGCAGAAGCAGCCTCGGGCAGGGCCCATTAAAGCTCAGAAGCTTCCAGACTTGAGTCTGGTAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 90 bp GACTATTCACTTGGATTCCATCTCCTTGCCCACCTTGCTTGTTACTaGCCCATGATTTGGGAGCAGGTGCTACTTCTGGGGGAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: DYSLGFHLLAHLACY*PMIWEQVLLLGELQ
Trigger: TTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCAAGTGAATAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 90 bp TTTGGTTTCTTTTGCTGTTTCAGGATCAGTGCTTCTGACCACAGCTaGGCTGGGTTTCTCTTGTCCTTCTGGCTCGACCTGCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: FGFFCCFRISASDHS*AGFLLSFWLDLLGI
Trigger: GATGCCCAGCAGGTCGAGCCAGAAGGACAAGAGAAACCCAGCCCAGCTGTGGTCAGAAGCACTGATCCTGAAACAGCAAAAGAAACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 90 bp AACCTCTGCTCTCTGCTTTGCCAACACCTAGGACCAAATGTCTTGTaGCTGAGTCCTCTTCCCACAGCTCTCTTCTGGGGTGCAAACTGT +
Preference number: 5 (lower is better)
Translates to: NLCSLLCQHLGPNVL*LSPLPTALFWGANC
Trigger: ACAGTTTGCACCCCAGAAGAGAGCTGTGGGAAGAGGACTCAGCCACAAGACATTTGGTCCTAGGTGTTGGCAAAGCAGAGAGCAGAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCCATCCTGTCCCATCTTaGGGCACAATATTCACATTA +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSHPVPS*GTIFTL
Trigger: TAATGTGAATATTGTGCCCAAAGATGGGACAGGATG...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCCTTGCCCACCTTGCTaGTTACTGGCCCATGATTTG +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPPCPPC*LLAHDL
Trigger: CAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGCCTTGCCCACCTTGCTaGTTACTGGCCCATGATTTG +
Preference number: 5 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKPCPPC*LLAHDL
Trigger: CAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGG...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCTTGGATTCCATCTCCTaGCCCACCTTGCTTGTTACT +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVLDSIS*PTLLVT
Trigger: AGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCAA...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCCTCTACAACAGGCTCTaGGGGTTCAACTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVLYNRL*GFNFFL
Trigger: GAGGAAAAAGTTGAACCCCAAGAGCCTGTTGTAGAG...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTTGCAGTTTCAGGCCTaGCATCCCCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHLQFQA*HPQFLQ
Trigger: CTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCAA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCAGACGGCTCATTTCTTaGTTCCTCTGCATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVRRLIS*FLCILS
Trigger: GCTCAGAATGCAGAGGAACAAAGAAATGAGCCGTCT...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGCCTTCTTCTCTTCTGTaGGAGCTTGGTCTTGGACCC +
Preference number: 5 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKPSSLL*ELGLGP
Trigger: GGGTCCAAGACCAAGCTCCAACAGAAGAGAAGAAGG...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACTTGTAGGCTCCCCTTaGGGAAGGAAACCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQLVGSP*GRKPGL
Trigger: TAAACCTGGTTTCCTTCCCAAAGGGGAGCCTACAAG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTTTTCCCACTCTTCATTaGCCTGATCTGAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: VTPEVRACGASLCSSSVTFPTLH*PDLKNS
Trigger: AGAATTCTTCAGATCAGGCAAATGAAGAGTGGGAAA...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCTCTCTTCCCACCTTTaGATGGTGGGCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHLSSHL*MVGHFF
Trigger: GAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGAG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCATTTTCATTCCCGTTaGAGGCCGGAGCACCAAACT +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHHFHSR*RPEHQT
Trigger: AGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAATG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCACATTTTCATTCCCGTTaGAGGCCGGAGCACCAAACT +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPHFHSR*RPEHQT
Trigger: AGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAATG...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACATTTTCATTCCCGTTaGAGGCCGGAGCACCAAACT +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPHFHSR*RPEHQT
Trigger: AGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAATG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCCAGGAACTTTATCAGTaGCTTTCTCTGAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVQELYQ*LSLKAQ
Trigger: CTGTGCTTTCAGAGAAAGCAACTGATAAAGTTCCTG...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACTGTGAAAAGTGACTaGCAGAAGGTAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPTVKSD*QKVGCW
Trigger: CCAGCAGCCTACCTTCTGCAAGTCACTTTTCACAGT...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGGATGGGCTGAGGATTaGAAGTCTGCTGAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQGWAED*KSAERQ
Trigger: TTGCCTTTCAGCAGACTTCAAATCCTCAGCCCATCC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCACTCAGTGTTATAAAAATTaGTCTGACCAGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: VTPEVRACGASLCSSSVTQCYKN*SDQAAV
Trigger: TACAGCAGCCTGGTCAGACAAATTTTTATAACACTG...AGTGACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTCCCGAGTGCTGGGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTGAGAGCACTGGGGGATaGGGCAGTGTTATAAAAATT +
Preference number: 5 (lower is better)
Translates to: LPSAGITAVHYHTCLPRFESTGG*GSVIKI
Trigger: AATTTTTATAACACTGCCCAATCCCCCAGTGCTCTC...AAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCCCAGCACTCGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATGGAGGTGTTCCTGGTTaGATATCAATGCCACTCCCA +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHGGVPG*ISMPLP
Trigger: TGGGAGTGGCATTGATATCAAACCAGGAACACCTCC...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCTTTGCCTTCAGATCTaGTTCAGCCTTCAACGCAGC +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHLCLQI*FSLQRS
Trigger: GCTGCGTTGAAGGCTGAACAAGATCTGAAGGCAAAG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACCTCTGCTCTCTGCTTaGCCTTCAGATCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQPLLSA*PSDLVQ
Trigger: CTGAACAAGATCTGAAGGCAAAGCAGAGAGCAGAGG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182660.8
CDS TCA 90 bp CAGACTGAGACACATAAACCTGCGGGCTCTGCTGCTGCTGTGCAATaGGGGAAGGCATACAGCTCAACTGTGAAAAGTGACTTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QTETHKPAGSAAAVQ*GKAYSSTVKSDLQK
Trigger: CTTCTGCAAGTCACTTTTCACAGTTGAGCTGTATGCCTTCCCTCATTGCACAGCAGCAGCAGAGCCCGCAGGTTTATGTGTCTCAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 90 bp ATAAGCAGCAGTCATATGCTCATGGTCCATTGCAGTTTCAGGCCTTaGATCCCCAGTTTCTTCAGCAGACTTGGGAGTAGCTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: ISSSHMLMVHCSFRP*IPSFFSRLGSSCLL
Trigger: CAGCAGGCAGCTACTCCCAAGTCTGCTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCAATGGACCATGAGCATATGACTGCTGCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 90 bp ATCAAATTTATCGAGCTCCTTCAGTTCGGATGCACTAAGGATGGATaGGCGTTCAGGTTCAGAAGCCCAAGAAGGAGGAGGGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: IKFIELLQFGCTKDG*AFRFRSPRRRRASS
Trigger: GGAAGAGGCCCTCCTCCTTCTTGGGCTTCTGAACCTGAACGCCCATCCATCCTTAGTGCATCCGAACTGAAGGAGCTCGATAAATTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CCA 90 bp TTCTCTCTCCCGCTCCTTCTCTCTCTCCCTTTCTCTAAGTTCCTCTaGAGATGGCTGCTTTTCTATGATCCCGAGCTTCTCATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: FSLPLLLSLPFSKFL*RWLLFYDPELLIQL
Trigger: CAGCTGGATGAGAAGCTCGGGATCATAGAAAAGCAGCCATCTCCAGAGGAACTTAGAGAAAGGGAGAGAGAGAAGGAGCGGGAGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CCA 90 bp ATTGACTATTCACTTGGATTCCTTGCTTGTTACTGGCCCATGATTTaGGAGCAGGTGCTACTTCTGGGGGAGCTGCAACCCCAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: IDYSLGFLACYWPMI*EQVLLLGELQPQVW
Trigger: CCAAACCTGGGGTTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGAATCCAAGTGAATAGTCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182331.2
ENSMUST00000183011.8
CDS-3UTR CAA 90 bp GATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTTTTTCTTCTTCATGTaGCTCTTGTTTCGATGCCCA +
Preference number: 5 (lower is better)
Translates to: DANVTPEVRACGASLCSSFFFFM*LLFRCP
Trigger: TGGGCATCGAAACAAGAGCAACATGAAGAAGAAAAA...GCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTTACTGGCCCATGATTaGGGAGCAGGTGCTACTTCT +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLLAHD*GAGATS
Trigger: AGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATTGGATTCCATCTCCTaGCCCACCTTGCTTGTTACT +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPLDSIS*PTLLVT
Trigger: AGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCAA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTTGCAGTTTCAGGCCTaGCATCCCCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLQFQA*HPQFLQ
Trigger: CTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCAA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCCTCTGTCGCCTTCTTTaGGGAACAACCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVLCRLL*GTTSKS
Trigger: TGATTTTGAGGTTGTTCCCAAAAGAAGGCGACAGAG...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGGCCGTTCCTCTCTTTaGGGAAGTTTCCCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPGRSSL*GSFPLL
Trigger: AAGCAAAGGGAAACTTCCCAAAAGAGAGGAACGGCC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTCGAGGTGGCTTATCTaGCCTTGGTGGTCGGGTAGG +
Preference number: 5 (lower is better)
Translates to: LVYKPTEDANVTPEVRACSRWLI*PWWSGR
Trigger: CCTACCCGACCACCAAGGCAAGATAAGCCACCTCGA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAAAATTCCTTCCTGATTaGGGTGGGCCATTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPKFLPD*GGPLLP
Trigger: TGGCAACAATGGCCCACCCAAATCAGGAAGGAATTT...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCTCTCTTCCCACCTTTaGATGGTGGGCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLSSHL*MVGHFF
Trigger: GAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGAG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCCATCATCATTCAGATTaGACTGGGGGTCTTCAATTA +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVHHHSD*TGGLQL
Trigger: TAATTGAAGACCCCCAGTCAAATCTGAATGATGATG...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTCCATACCTGTACGACTaGCTCTTCCTTCTTTCGGCG +
Preference number: 5 (lower is better)
Translates to: LSVSGLLVSLSTLWVLPPPYLYD*LFLLSA
Trigger: CGCCGAAAGAAGGAAGAGCAAGTCGTACAGGTATGG...AGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCACCATACCTGTACGACTaGCTCTTCCTTCTTTCGGCG +
Preference number: 5 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASPYLYD*LFLLSA
Trigger: CGCCGAAAGAAGGAAGAGCAAGTCGTACAGGTATGG...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGCCAGTAGCTTGTTTTTaGGCAAACCTTGGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLPVACF*ANLGGS
Trigger: GCTTCCTCCAAGGTTTGCCAAAAAACAAGCTACTGG...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACCAGTAGCTTGTTTTTaGGCAAACCTTGGAGGAAGC +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPPVACF*ANLGGS
Trigger: GCTTCCTCCAAGGTTTGCCAAAAAACAAGCTACTGG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGAGCCGAGGCTGAGGTaGGAACTGGAGCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: YVLVYKPTEDANVTPEVREPRLR*ELELGM
Trigger: CATGCCCAGCTCCAGTTCCAACCTCAGCCTCGGCTC...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTTTCAACACCACTCTCTaGACCATTTCTTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCFNTTL*TISCSL
Trigger: GAGGGAACAAGAAATGGTCAAGAGAGTGGTGTTGAA...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCCTTTTCTCGTAGATTaGGAGAATTCTCCCATGCCT +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAPFLVD*ENSPMP
Trigger: AGGCATGGGAGAATTCTCCAAATCTACGAGAAAAGG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGCAGTGTTATAAAAATTaGTCTGACCAGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: QMLHRRCEPVEPHCAAALQCYKN*SDQAAV
Trigger: TACAGCAGCCTGGTCAGACAAATTTTTATAACACTG...CAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTGAGAGCACTGGGGGATaGGGCAGTGTTATAAAAATT +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAESTGG*GSVIKI
Trigger: AATTTTTATAACACTGCCCAATCCCCCAGTGCTCTC...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGGAGGTGTTCCTGGTTaGATATCAATGCCACTCCCA +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPGGVPG*ISMPLP
Trigger: TGGGAGTGGCATTGATATCAAACCAGGAACACCTCC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAGCGTTTCAGGGTTACTaGTATCACTGTCCACTCTCT +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPAFQGY*YHCPLS
Trigger: AGAGAGTGGACAGTGATACAAGTAACCCTGAAACGC...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGCGTTTCAGGGTTACTaGTATCACTGTCCACTCTCT +
Preference number: 5 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQAFQGY*YHCPLS
Trigger: AGAGAGTGGACAGTGATACAAGTAACCCTGAAACGC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 90 bp GCTTTCATCCTGGCCAAGTTGCTTTTCATCCTGATCAGAGGAAGGTaGCCCAGCAGACTTACCACCATCTCTCCAGCAAGCAACATTTGG +
Preference number: 5 (lower is better)
Translates to: AFILAKLLFILIRGR*PSRLTTISPASNIW
Trigger: CCAAATGTTGCTTGCTGGAGAGATGGTGGTAAGTCTGCTGGGTCACCTTCCTCTGATCAGGATGAAAAGCAACTTGGCCAGGATGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS TCA 90 bp CCTGCTGACGCTGAAATCGTGGTGGCAATGATTTCTGAAACTGTTTaGAATAGCCAGGTCGAGGTTGAGCCCCCGATTCAGGTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: PADAEIVVAMISETV*NSQVEVEPPIQVLL
Trigger: AAGCAGAACCTGAATCGGGGGCTCAACCTCGACCTGGCTATTTCAAACAGTTTCAGAAATCATTGCCACCACGATTTCAGCGTCAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 90 bp GCTGCTGAGCCAGGGATGGTGGAGCCAATCGCGCATGCTGCGTATTaGATAAATGACTTGTATCCATATAGAAGGCTGGGATTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: AAEPGMVEPIAHAAY*INDLYPYRRLGFEL
Trigger: CAGCTCAAATCCCAGCCTTCTATATGGATACAAGTCATTTATTCAATACGCAGCATGCGCGATTGGCTCCACCATCCCTGGCTCAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 90 bp CTGTTTGAAATAGCCAGGTCGAGGTTGAGCCCCCGATTCAGGTTCTaGTTCTTGTACCACTTGTGTGGTCTCCTTTTCACTGCGATTGCT +
Preference number: 5 (lower is better)
Translates to: LFEIARSRLSPRFRF*FLYHLCGLLFTAIA
Trigger: AGCAATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAGAAGCAGAACCTGAATCGGGGGCTCAACCTCGACCTGGCTATTTCAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 90 bp CGCCCCAATTTCAGCAGACATTTCGGAGACTGCTTTGGTTTCTTTTaGTGTTTCAGGATCAGTGCTTCTGACCACAGCTGGGCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: RPNFSRHFGDCFGFF*CFRISASDHSWAGF
Trigger: AAACCCAGCCCAGCTGTGGTCAGAAGCACTGATCCTGAAACAGCAAAAGAAACCAAAGCAGTCTCCGAAATGTCTGCTGAAATTGGGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 90 bp AGCCCTGAATGGACTAGATGTTGGCGTGGTGCTTCGACCACCAATTaGAGGTGTTCCTGGTTTGATATCAATGCCACTCCCAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: SPEWTRCWRGASTTN*RCSWFDINATPKGF
Trigger: AAAGCCTTTGGGAGTGGCATTGATATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGCACCACGCCAACATCTAGTCCATTCAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGTCCCATCCTTGGCTTTaGTGCTCTGGCCTGACTTCT +
Preference number: 5 (lower is better)
Translates to: TRVSLGFLQDKVSHTYRWSHPWL*CSGLTS
Trigger: AGAAGTCAGGCCAGAGCACAAAAGCCAAGGATGGGA...CCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGACACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAACCTTTGTTCTCTGCTTaGAGACTTGGAAGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQPLFSA*RLGRLA
Trigger: TGCTAACCTTCCAAGTCTCAAAGCAGAGAACAAAGG...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCCATCCTGTCCCATCTTaGGGCACAATATTCACATTA +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVHPVPS*GTIFTL
Trigger: TAATGTGAATATTGTGCCCAAAGATGGGACAGGATG...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATTCTTCATGTTGCTCTaGTTTCGATGCCCATCCTGT +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPFFMLL*FRCPSC
Trigger: ACAGGATGGGCATCGAAACAAGAGCAACATGAAGAA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGTTCATCCTGGCCAAGTaGCTTTTCATCCTGATCAGA +
Preference number: 5 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLFILAK*LFILIR
Trigger: TCTGATCAGGATGAAAAGCAACTTGGCCAGGATGAA...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATGCTTCTTGTACCACTaGTGTGGTCTCCTTTTCACT +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPCFLYH*CGLLFT
Trigger: AGTGAAAAGGAGACCACACAAGTGGTACAAGAAGCA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGTTCAGGTTCTGCTTCTaGTACCACTTGTGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKFRFCF*YHLCGL
Trigger: GAGACCACACAAGTGGTACAAGAAGCAGAACCTGAA...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGAAAGCCATCTTTTCTaGGCTTCTCCTCTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQESHLF*ASPLAF
Trigger: AAAAGCCAGAGGAGAAGCCAAGAAAAGATGGCTTTC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTTGTTGGAGCTTGGTCTaGGACCCCACCGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LVYKPTEDANVTPEVRACCWSLV*DPTEFL
Trigger: CAGAAACTCGGTGGGGTCCAAGACCAAGCTCCAACA...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTGCTTCTGAGTCAAAGTaGATGTTTCTGTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCASESK*MFLLMV
Trigger: CACCATCAACAGAAACATCAACTTTGACTCAGAAGC...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCTTGGGAAGTTTCCCTTaGCTTACACTGTCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVLGSFP*LTLSLS
Trigger: TGACAAAGACAGTGTAAGCAAAGGGAAACTTCCCAA...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTTCGCTATTTCCCTTTTaGGAGGCAAAACACTTTCAC +
Preference number: 5 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCSLFPF*EAKHFH
Trigger: GTGAAAGTGTTTTGCCTCCAAAAAGGGAAATAGCGA...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCTCGCTATTTCCCTTTTaGGAGGCAAAACACTTTCAC +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVSLFPF*EAKHFH
Trigger: GTGAAAGTGTTTTGCCTCCAAAAAGGGAAATAGCGA...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGCTGGAGCAGCCACTTaGCTGTCCCATAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: LVYKPTEDANVTPEVRACAGAAT*LSHNSA
Trigger: AGCTGAGTTATGGGACAGCAAAGTGGCTGCTCCAGC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTTCTCTTGACCATTTCTaGTTCCCTCTGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAASLDHF*FPLMKL
Trigger: CAACTTCATCAGAGGGAACAAGAAATGGTCAAGAGA...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp AATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCACTGTGCAGCAGCTCTGTCGAGCACCAAACTGAATaGTGTCAATTCCAATTTCAA +
Preference number: 5 (lower is better)
Translates to: NVTPEVRACGASLCSSSVEHQTE*CQFQFQ
Trigger: TTGAAATTGGAATTGACACAATTCAGTTTGGTGCTC...GACAGAGCTGCTGCACAGTGAGGCTCCACAGGCTCGCACCTCCGGTGTAACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCACATTTTCATTCCCGTTaGAGGCCGGAGCACCAAACT +
Preference number: 5 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASHFHSR*RPEHQT
Trigger: AGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAATG...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCAGGAACTTTATCAGTaGCTTTCTCTGAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAQELYQ*LSLKAQ
Trigger: CTGTGCTTTCAGAGAAAGCAACTGATAAAGTTCCTG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACTGCTTTGGTTTCTTTaGCTGTTTCAGGATCAGTGC +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPLLWFL*LFQDQC
Trigger: GCACTGATCCTGAAACAGCAAAAGAAACCAAAGCAG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCAGGATGGGCTGAGGATTaGAAGTCTGCTGAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASGWAED*KSAERQ
Trigger: TTGCCTTTCAGCAGACTTCAAATCCTCAGCCCATCC...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTTGCCTCCTATCTGTTaGTTCTGTTGCTGTTCAGAG +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHLPPIC*FCCCSE
Trigger: CTCTGAACAGCAACAGAACAAACAGATAGGAGGCAA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGTCCACTCTCTGGGTTTaGCCTCCTATCTGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKSTLWV*PPICLF
Trigger: GAACAAACAGATAGGAGGCAAAACCCAGAGAGTGGA...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182660.8
CDS TCA 90 bp TTGCTGTTTCATCTGCTCCTGCTGACGCTGAAATCGTGGTGGCAATaGTTTCTGAAACTGTTTGAAATAGCCAGGTCGAGGTTGAGCCCC +
Preference number: 5 (lower is better)
Translates to: LLFHLLLLTLKSWWQ*FLKLFEIARSRLSP
Trigger: GGGGCTCAACCTCGACCTGGCTATTTCAAACAGTTTCAGAAATCATTGCCACCACGATTTCAGCGTCAGCAGGAGCAGATGAAACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 90 bp TCTGGAGTAATACTCGCCTCTGCCTCGGCCTCTGTATCCTTGGTCTaGAAACCAATCCCTATCTCTAGCTTCTTTCCAATAGGTCCTAGT +
Preference number: 5 (lower is better)
Translates to: SGVILASASASVSLV*KPIPISSFFPIGPS
Trigger: ACTAGGACCTATTGGAAAGAAGCTAGAGATAGGGATTGGTTTCCAGACCAAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTCCTTTGTTCTCTGCTTaGAGACTTGGAAGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPPLFSA*RLGRLA
Trigger: TGCTAACCTTCCAAGTCTCAAAGCAGAGAACAAAGG...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTTTTTTCTTCTTCATGTaGCTCTTGTTTCGATGCCCA +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAFFFFM*LLFRCP
Trigger: TGGGCATCGAAACAAGAGCAACATGAAGAAGAAAAA...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAAAATTGACTATTCACTaGGATTCCATCTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPKLTIH*DSISLP
Trigger: GGGCAAGGAGATGGAATCCAAGTGAATAGTCAATTT...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CCGGACAGGTGCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCTTCCTCGAAGGCTTTaGTTTGCTTCTGATAATGAA +
Preference number: 5 (lower is better)
Translates to: PDRCQEGHSAFQGYLYHCLPRRL*FASDNE
Trigger: TTCATTATCAGAAGCAAACAAAAGCCTTCGAGGAAG...ACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGCACCTGTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCTTCCTCGAAGGCTTTaGTTTGCTTCTGATAATGAA +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAALPRRL*FASDNE
Trigger: TTCATTATCAGAAGCAAACAAAAGCCTTCGAGGAAG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GCCAGGAGGGTCACTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGAAGCAGACTGAGTATTaGTATCAACATGGCGAGGTT +
Preference number: 5 (lower is better)
Translates to: ARRVTQRFRVTCITVHSLKQTEY*YQHGEV
Trigger: AACCTCGCCATGTTGATACAAATACTCAGTCTGCTT...CAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAGTGACCCTCCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATTTGGGAAGTTTCCCTTaGCTTACACTGTCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHLGSFP*LTLSLS
Trigger: TGACAAAGACAGTGTAAGCAAAGGGAAACTTCCCAA...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCAATTTTCGCTCAAATTTaGGAGGTCGTTTATCTGCCG +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPIFAQI*EVVYLP
Trigger: CGGCAGATAAACGACCTCCAAAATTTGAGCGAAAAT...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCGCTATTTCCCTTTTaGGAGGCAAAACACTTTCAC +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPSLFPF*EAKHFH
Trigger: GTGAAAGTGTTTTGCCTCCAAAAAGGGAAATAGCGA...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCATCATCATTCAGATTaGACTGGGGGTCTTCAATTA +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAHHHSD*TGGLQL
Trigger: TAATTGAAGACCCCCAGTCAAATCTGAATGATGATG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCGCGGAGGGTGGAGCTaGGATTTGCTGAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRRGGWS*DLLSPS
Trigger: ACTGGGACTCAGCAAATCCAAGCTCCACCCTCCGCG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGGAGCCGAGGCTGAGGTaGGAACTGGAGCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLREPRLR*ELELGM
Trigger: CATGCCCAGCTCCAGTTCCAACCTCAGCCTCGGCTC...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATCTCTTGACCATTTCTaGTTCCCTCTGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPSLDHF*FPLMKL
Trigger: CAACTTCATCAGAGGGAACAAGAAATGGTCAAGAGA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGTTCAACACCACTCTCTaGACCATTTCTTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVFNTTL*TISCSL
Trigger: GAGGGAACAAGAAATGGTCAAGAGAGTGGTGTTGAA...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACACAAGGGAGCAGAAGAGCCACAGCTGATGGATTCATGGGACCACCCAGTGTCCCAGGTTTATGTTCTTaGTTTTCTACCAGACTCAAG +
Preference number: 5 (lower is better)
Translates to: TQGSRRATADGFMGPPSVPGLCS*FSTRLK
Trigger: CTTGAGTCTGGTAGAAAACAAAGAACATAAACCTGG...GACACTGGGTGGTCCCATGAATCCATCAGCTGTGGCTCTTCTGCTCCCTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGCCTTTTCTCGTAGATTaGGAGAATTCTCCCATGCCT +
Preference number: 5 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVPFLVD*ENSPMP
Trigger: AGGCATGGGAGAATTCTCCAAATCTACGAGAAAAGG...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTCTGCGAGAGACCAGGTaGGAAGCCCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLLRETR*EALLLS
Trigger: GCTCAGCAGCAGGGCTTCCAACCTGGTCTCTCGCAG...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCCTGCGAGAGACCAGGTaGGAAGCCCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETLRETR*EALLLS
Trigger: GCTCAGCAGCAGGGCTTCCAACCTGGTCTCTCGCAG...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGCTGCTCAGTGTTATAAAAATTaGTCTGACCAGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: APCVSQDDVTDHFTPVAAQCYKN*SDQAAV
Trigger: TACAGCAGCCTGGTCAGACAAATTTTTATAACACTG...AGCAGCCACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 90 bp GGGCCATTGTTGCCACGACGATTCTGGCGATCAACTCCAGGTCTCTaGCTAGAAAAACTTCTCTTCGCTATTTCCCTTTTTGGAGGCAAA +
Preference number: 5 (lower is better)
Translates to: GPLLPRRFWRSTPGL*LEKLLFAISLFGGK
Trigger: TTTGCCTCCAAAAAGGGAAATAGCGAAGAGAAGTTTTTCTAGTCAGAGACCTGGAGTTGATCGCCAGAATCGTCGTGGCAACAATGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 90 bp CTGAAACATATATGGAGGCATCATAGCTCTATACTGAGAAGCAAGTaGAGGTTGCTGTCCATTCAGTTTGGCCTGTGGAGGACCACAAGC +
Preference number: 5 (lower is better)
Translates to: LKHIWRHHSSILRSK*RLLSIQFGLWRTTS
Trigger: GCTTGTGGTCCTCCACAGGCCAAACTGAATGGACAGCAACCTGCACTTGCTTCTCAGTATAGAGCTATGATGCCTCCATATATGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 90 bp CCTTCGCTCTTCCTCCTCACGGCGTTTACGAGCACGCTCTACTGCTaGAGATATTTCAGACTGTTGTTTTCGTCTTTGCTTCCATATTTC +
Preference number: 5 (lower is better)
Translates to: PSLFLLTAFTSTLYC*RYFRLLFSSLLPYF
Trigger: GAAATATGGAAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGTAGAGCGTGCTCGTAAACGCCGTGAGGAGGAAGAGCGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 90 bp CATCCTTCGCTCTTCCTCCTCACGGCGTTTACGAGCACGCTCTACTaGTGCAGATATTTCAGACTGTTGTTTTCGTCTTTGCTTCCATAT +
Preference number: 5 (lower is better)
Translates to: HPSLFLLTAFTSTLY*CRYFRLLFSSLLPY
Trigger: ATATGGAAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGTAGAGCGTGCTCGTAAACGCCGTGAGGAGGAAGAGCGAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 90 bp ACTATGTTCTACAGGATAAGCAGCAGTCATATGCTCATGGTCCATTaGAGTTTCAGGCCTTGCATCCCCAGTTTCTTCAGCAGACTTGGG +
Preference number: 5 (lower is better)
Translates to: TMFYRISSSHMLMVH*SFRPCIPSFFSRLG
Trigger: CCCAAGTCTGCTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCAATGGACCATGAGCATATGACTGCTGCTTATCCTGTAGAACATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 90 bp CTCGAAGGCTTTTGTTTGCTTCTGATAATGAAGGTGGGAACCTCATaGGACCATGTAGAGGAGGATATGCCATCCTTGGGTACTGCTGAA +
Preference number: 5 (lower is better)
Translates to: LEGFCLLLIMKVGTS*DHVEEDMPSLGTAE
Trigger: TTCAGCAGTACCCAAGGATGGCATATCCTCCTCTACATGGTCCCATGAGGTTCCCACCTTCATTATCAGAAGCAAACAAAAGCCTTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CCA 90 bp TTCGTCTTTGCTTCCATATTTCATCGTTATCAGGTACTGGAGGCTTaGAGGGAAAGGGGCCTTGTCTTCCAGGTATTTGTCGATCTGGAG +
Preference number: 5 (lower is better)
Translates to: FVFASIFHRYQVLEA*RERGLVFQVFVDLE
Trigger: CTCCAGATCGACAAATACCTGGAAGACAAGGCCCCTTTCCCTCCAAGCCTCCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCACTTCCTCGAAGGCTTTaGTTTGCTTCTGATAATGAA +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPLPRRL*FASDNE
Trigger: TTCATTATCAGAAGCAAACAAAAGCCTTCGAGGAAG...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTAAGCAGACTGAGTATTaGTATCAACATGGCGAGGTT +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPKQTEY*YQHGEV
Trigger: AACCTCGCCATGTTGATACAAATACTCAGTCTGCTT...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGCTTCTGAGTCAAAGTaGATGTTTCTGTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPASESK*MFLLMV
Trigger: CACCATCAACAGAAACATCAACTTTGACTCAGAAGC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGCAAAGGTTTCTCATCTaGAGATGGCTTCTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVQRFLI*RWLLSQ
Trigger: TTGACTCAGAAGCCATCTCAAGATGAGAAACCTTTG...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTTGGGAAGTTTCCCTTaGCTTACACTGTCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPLGSFP*LTLSLS
Trigger: TGACAAAGACAGTGTAAGCAAAGGGAAACTTCCCAA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCATTTCCCACTCTTCATTaGCCTGATCTGAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPFPTLH*PDLKNS
Trigger: AGAATTCTTCAGATCAGGCAAATGAAGAGTGGGAAA...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTTCGCTATTTCCCTTTTaGGAGGCAAAACACTTTCAC +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPSLFPF*EAKHFH
Trigger: GTGAAAGTGTTTTGCCTCCAAAAAGGGAAATAGCGA...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCATCATCATTCAGATTaGACTGGGGGTCTTCAATTA +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHHHHSD*TGGLQL
Trigger: TAATTGAAGACCCCCAGTCAAATCTGAATGATGATG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCGCGGAGGGTGGAGCTaGGATTTGCTGAGTCCCAGT +
Preference number: 5 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYRGGWS*DLLSPS
Trigger: ACTGGGACTCAGCAAATCCAAGCTCCACCCTCCGCG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACGAGCCGAGGCTGAGGTaGGAACTGGAGCTGGGCATG +
Preference number: 5 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNEPRLR*ELELGM
Trigger: CATGCCCAGCTCCAGTTCCAACCTCAGCCTCGGCTC...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCAGGTTTATGTTCTTaGTTTTCTACCAGACTCAAG +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHPGLCS*FSTRLK
Trigger: CTTGAGTCTGGTAGAAAACAAAGAACATAAACCTGG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTGCGAGAGACCAGGTaGGAAGCCCTGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCILRETR*EALLLS
Trigger: GCTCAGCAGCAGGGCTTCCAACCTGGTCTCTCGCAG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTCAAACTCAGCTGGGCTaGGTGCTGCCCTTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLQTQLG*VLPLQW
Trigger: CCACTGCAAGGGCAGCACCAAGCCCAGCTGAGTTTG...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCACAGTGTTATAAAAATTaGTCTGACCAGGCTGCTGTA +
Preference number: 5 (lower is better)
Translates to: CGCWLALFDFTFPTHPSPQCYKN*SDQAAV
Trigger: TACAGCAGCCTGGTCAGACAAATTTTTATAACACTG...TGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGACTGGCCAGTGCCATaGGTGGCCTCTGTACAGGCG +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIDWPVP*VASVQA
Trigger: CGCCTGTACAGAGGCCACCAATGGCACTGGCCAGTC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTATCTCTTCTTCAGATCTaGTTCAGCCTTCAACGCAGC +
Preference number: 5 (lower is better)
Translates to: SAFQGYLYHCPLSGFCLLSLLQI*FSLQRS
Trigger: GCTGCGTTGAAGGCTGAACAAGATCTGAAGAAGAGA...TAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS TCA 90 bp AATCATTCCAGGATGAATGGGTGGAATGTCCATAGCAGGCCTTCCTaGTATCATTCGAGGATCCATATAGGACTGCATCATGAGCCACCT +
Preference number: 5 (lower is better)
Translates to: NHSRMNGWNVHSRPS*YHSRIHIGLHHEPP
Trigger: AGGTGGCTCATGATGCAGTCCTATATGGATCCTCGAATGATATCAGGAAGGCCTGCTATGGACATTCCACCCATTCATCCTGGAATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 90 bp AGGTGGATTAACTGGTTCTTGAACAACATTATTAGCTGTGCCATTTaGGGGTACCAACACCTCACTTGTCTTGGAAGCGGCCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: RWINWFLNNIISCAI*GYQHLTCLGSGLSL
Trigger: GAGAGAGAGGCCGCTTCCAAGACAAGTGAGGTGTTGGTACCCTCAAATGGCACAGCTAATAATGTTGTTCAAGAACCAGTTAATCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 90 bp ATGTTGGCGTGGTGCTTCGACCACCAATTGGAGGTGTTCCTGGTTTaGTATCAATGCCACTCCCAAAGGCTTTTAGTTCCATTTCAGACA +
Preference number: 5 (lower is better)
Translates to: MLAWCFDHQLEVFLV*YQCHSQRLLVPFQT
Trigger: TGTCTGAAATGGAACTAAAAGCCTTTGGGAGTGGCATTGATATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGCACCACGCCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 90 bp CGCTCAAATTTTGGAGGTCGTTTATCTGCCGGTATAGGCATAAACTaGTCATGTCTTCTTGGTGGCTCTCCATCTTCAGGTTTAGGAGGT +
Preference number: 5 (lower is better)
Translates to: RSNFGGRLSAGIGIN*SCLLGGSPSSGLGG
Trigger: ACCTCCTAAACCTGAAGATGGAGAGCCACCAAGAAGACATGAGCAGTTTATGCCTATACCGGCAGATAAACGACCTCCAAAATTTGAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 90 bp TCTAGCCGGGTCAAATTTTCGCTCAAATTTTGGAGGTCGTTTATCTaGCGGTATAGGCATAAACTGCTCATGTCTTCTTGGTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: SSRVKFSLKFWRSFI*RYRHKLLMSSWWLS
Trigger: GGAGAGCCACCAAGAAGACATGAGCAGTTTATGCCTATACCGGCAGATAAACGACCTCCAAAATTTGAGCGAAAATTTGACCCGGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 90 bp CTGTTGTTTTCGTCTTTGCTTCCATATTTCATCGTTATCAGGTACTaGAGGCTTGGAGGGAAAGGGGCCTTGTCTTCCAGGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: LLFSSLLPYFIVIRY*RLGGKGALSSRYLS
Trigger: CGACAAATACCTGGAAGACAAGGCCCCTTTCCCTCCAAGCCTCCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGAAAACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS-3UTR CAA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTAGGTGTTTTTGCAGTTaGATCCTCACTGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: LVYKPTEDANVTPEVRACRCFCS*ILTAAL
Trigger: GAGAGCAGCAGTGAGGATCAAACTGCAAAAACACCT...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGGAGGGAAAGGGGCCTaGTCTTCCAGGTATTTGTCG +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRGGKGA*SSRYLS
Trigger: CGACAAATACCTGGAAGACAAGGCCCCTTTCCCTCC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCACTGTTGTTTTCGTCTTaGCTTCCATATTTCATCGTT +
Preference number: 5 (lower is better)
Translates to: YPCGCWLALFDFTFPTHPLLFSS*LPYFIV
Trigger: AACGATGAAATATGGAAGCAAAGACGAAAACAACAG...TGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACCCCTGTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCTGTTGTTTTCGTCTTaGCTTCCATATTTCATCGTT +
Preference number: 5 (lower is better)
Translates to: TPVAAGWHYLTSLSLPTHLLFSS*LPYFIV
Trigger: AACGATGAAATATGGAAGCAAAGACGAAAACAACAG...ATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCACAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTGGCTGCTGGCTGGCATTATTTGACTTCACTTTCCCTACCCACCCATCCCCAAGAATCCATACATCTGTaGATAACCTTAGGTATGCTA +
Preference number: 5 (lower is better)
Translates to: VAAGWHYLTSLSLPTHPQESIHL*ITLGML
Trigger: TAGCATACCTAAGGTTATCAACAGATGTATGGATTC...TTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAATGCCAGCCAGCAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGTTGGAGCTTGGTCTaGGACCCCACCGAGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRCWSLV*DPTEFL
Trigger: CAGAAACTCGGTGGGGTCCAAGACCAAGCTCCAACA...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCGAGGTGGCTTATCTaGCCTTGGTGGTCGGGTAGG +
Preference number: 5 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETSRWLI*PWWSGR
Trigger: CCTACCCGACCACCAAGGCAAGATAAGCCACCTCGA...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGCATCATCATTCAGATTaGACTGGGGGTCTTCAATTA +
Preference number: 5 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVHHHSD*TGGLQL
Trigger: TAATTGAAGACCCCCAGTCAAATCTGAATGATGATG...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCATCTCTTGACCATTTCTaGTTCCCTCTGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASSLDHF*FPLMKL
Trigger: CAACTTCATCAGAGGGAACAAGAAATGGTCAAGAGA...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGATTACAGCCGTGCACTACCACACGTGTCTCCCTAGGTTTTCTCCAAGACAAGCCAGGTTTATGTTCTTaGTTTTCTACCAGACTCAAG +
Preference number: 5 (lower is better)
Translates to: GLQPCTTTRVSLGFLQDKPGLCS*FSTRLK
Trigger: CTTGAGTCTGGTAGAAAACAAAGAACATAAACCTGG...CTTGTCTTGGAGAAAACCTAGGGAGACACGTGTGGTAGTGCACGGCTGTAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTGGGCTGGGTTTCTCTaGTCCTTCTGGCTCGACCTG +
Preference number: 5 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYWAGFL*SFWLDL
Trigger: CAGGTCGAGCCAGAAGGACAAGAGAAACCCAGCCCA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACGGCTTGGTGCTGCCCTaGCAGTGGGGCATAGATAGG +
Preference number: 5 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNGLVLP*QWGIDR
Trigger: CCTATCTATGCCCCACTGCAAGGGCAGCACCAAGCC...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACGGATGGGCTGAGGATTaGAAGTCTGCTGAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYGWAED*KSAERQ
Trigger: TTGCCTTTCAGCAGACTTCAAATCCTCAGCCCATCC...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp ACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGGGATGGGCTGAGGATTaGAAGTCTGCTGAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: TYLYTNQLKMQMLHRRCEGWAED*KSAERQ
Trigger: TTGCCTTTCAGCAGACTTCAAATCCTCAGCCCATCC...CTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 90 bp GCACGCTCTACTGCTGCAGATATTTCAGACTGTTGTTTTCGTCTTTaGTTCCATATTTCATCGTTATCAGGTACTGGAGGCTTGGAGGGA +
Preference number: 5 (lower is better)
Translates to: ARSTAADISDCCFRL*FHISSLSGTGGLEG
Trigger: TCCCTCCAAGCCTCCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGTAGAGCGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 90 bp TTCTCAGGTGGCTTTTCTTCTTTGACTGTCGGTGCTGCAACGCTTTaGTGGTTTACAGTTTTAACTACAGGTTCTACCTGGACACTACCA +
Preference number: 5 (lower is better)
Translates to: FSGGFSSLTVGAATL*WFTVLTTGSTWTLP
Trigger: TGGTAGTGTCCAGGTAGAACCTGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCCACCTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 90 bp TCAGGTGGCTTTTCTTCTTTGACTGTCGGTGCTGCAACGCTTTGCTaGTTTACAGTTTTAACTACAGGTTCTACCTGGACACTACCAACA +
Preference number: 5 (lower is better)
Translates to: SGGFSSLTVGAATLC*FTVLTTGSTWTLPT
Trigger: TGTTGGTAGTGTCCAGGTAGAACCTGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCCACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAAGAAGCAAGTGCAGGTaGCTGTCCATTCAGTTTGGC +
Preference number: 5 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRRSKCR*LSIQFG
Trigger: GCCAAACTGAATGGACAGCAACCTGCACTTGCTTCT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTAGGTGGGGGATGCTGTaGTGCAAGCAACTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTRWGML*CKQLGR
Trigger: CCTCCCAAGTTGCTTGCACAACAGCATCCCCCACCT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATATCGAGGTGGCTTATCTaGCCTTGGTGGTCGGGTAGG +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCISRWLI*PWWSGR
Trigger: CCTACCCGACCACCAAGGCAAGATAAGCCACCTCGA...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTCAGCGTTTCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTGCCTCCTTTTCCCACTCTTCATTaGCCTGATCTGAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: LSVSGLLVSLSTLWVLPPFPTLH*PDLKNS
Trigger: AGAATTCTTCAGATCAGGCAAATGAAGAGTGGGAAA...AGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGAAACGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp CAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGAATGTTTAGAAACCGATTTGGGTGGGCCATaGTTGCCACGACGATTCTGG +
Preference number: 5 (lower is better)
Translates to: QKTTDLKSLANVLECLETDLGGP*LPRRFW
Trigger: CCAGAATCGTCGTGGCAACAATGGCCCACCCAAATC...GGTTTCTAAACATTCAAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACAAATTCCTTCCTGATTaGGGTGGGCCATTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYKFLPD*GGPLLP
Trigger: TGGCAACAATGGCCCACCCAAATCAGGAAGGAATTT...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGACTCTCTTCCCACCTTTaGATGGTGGGCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRLSSHL*MVGHFF
Trigger: GAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGAG...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGGAGCCTGAGCACCAAACTGAATaGTGTCAATTCCAATTTCAA +
Preference number: 5 (lower is better)
Translates to: TNQLKMQMLHRRCEPVEPEHQTE*CQFQFQ
Trigger: TTGAAATTGGAATTGACACAATTCAGTTTGGTGCTC...AGGCTCCACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTCTATGCCCCTTGTGTCTCACAGGATGATGTCACAGACCACTTTACCCCTGTGGAGCACCAAACTGAATaGTGTCAATTCCAATTTCAA +
Preference number: 5 (lower is better)
Translates to: LYAPCVSQDDVTDHFTPVEHQTE*CQFQFQ
Trigger: TTGAAATTGGAATTGACACAATTCAGTTTGGTGCTC...CACAGGGGTAAAGTGGTCTGTGACATCATCCTGTGAGACACAAGGGGCATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 90 bp CAAAATCAGAACTCTCACTTCGTGTTTCGCTTTCTTCTCGTTGTCTaGGAGGTCCTGAAGGCACATGTTCTGTTCTTGGCTTATTGTCTC +
Preference number: 5 (lower is better)
Translates to: QNQNSHFVFRFLLVV*EVLKAHVLFLAYCL
Trigger: GAGACAATAAGCCAAGAACAGAACATGTGCCTTCAGGACCTCTCAGACAACGAGAAGAAAGCGAAACACGAAGTGAGAGTTCTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 90 bp CTCTGGTTTAGGCCCTTCAGAAGATCGCAGAAAGCCATCTTTTCTTaGCTTCTCCTCTGGCTTTTCTACAGTTTCTTTGGAATCCATACA +
Preference number: 5 (lower is better)
Translates to: LWFRPFRRSQKAIFS*LLLWLFYSFFGIHT
Trigger: TGTATGGATTCCAAAGAAACTGTAGAAAAGCCAGAGGAGAAGCCAAGAAAAGATGGCTTTCTGCGATCTTCTGAAGGGCCTAAACCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTAAATTGACTATTCACTaGGATTCCATCTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: LVYKPTEDANVTPEVRACKLTIH*DSISLP
Trigger: GGGCAAGGAGATGGAATCCAAGTGAATAGTCAATTT...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAAGGTGTTTTTGCAGTTaGATCCTCACTGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRRCFCS*ILTAAL
Trigger: GAGAGCAGCAGTGAGGATCAAACTGCAAAAACACCT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTTGTCTTCCAGGTATTaGTCGATCTGGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETLSSRY*SIWRWG
Trigger: CCCCCACCTCCAGATCGACAAATACCTGGAAGACAA...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GTCTCCCTAGGTTTTCTCCAAGACAAGGTCTCACACACATACAGATGGGCCTCACTGTTGTTTTCGTCTTaGCTTCCATATTTCATCGTT +
Preference number: 5 (lower is better)
Translates to: VSLGFLQDKVSHTYRWASLLFSS*LPYFIV
Trigger: AACGATGAAATATGGAAGCAAAGACGAAAACAACAG...TGAGGCCCATCTGTATGTGTGTGAGACCTTGTCTTGGAGAAAACCTAGGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCACTGCTGCTGCCACTGTaGCTGTTTCATCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDALLLPL*LFHLLL
Trigger: CAGGAGCAGATGAAACAGCAACAGTGGCAGCAGCAG...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAAGACGGCTCATTTCTTaGTTCCTCTGCATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRRRLIS*FLCILS
Trigger: GCTCAGAATGCAGAGGAACAAAGAAATGAGCCGTCT...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGAGCTGGAGCAGCCACTTaGCTGTCCCATAACTCAGCT +
Preference number: 5 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGAGAAT*LSHNSA
Trigger: AGCTGAGTTATGGGACAGCAAAGTGGCTGCTCCAGC...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTCAGGAACTTTATCAGTaGCTTTCTCTGAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: LVYKPTEDANVTPEVRACQELYQ*LSLKAQ
Trigger: CTGTGCTTTCAGAGAAAGCAACTGATAAAGTTCCTG...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATGGGCTGGGTTTCTCTaGTCCTTCTGGCTCGACCTG +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKWAGFL*SFWLDL
Trigger: CAGGTCGAGCCAGAAGGACAAGAGAAACCCAGCCCA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGACTGTGAAAAGTGACTaGCAGAAGGTAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRTVKSD*QKVGCW
Trigger: CCAGCAGCCTACCTTCTGCAAGTCACTTTTCACAGT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGAAAGGCTGGCTTACTaGGGCAGGACGGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAERLAY*GRTAQT
Trigger: AGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTTC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGGAGGTGTTCCTGGTTaGATATCAATGCCACTCCCA +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRGGVPG*ISMPLP
Trigger: TGGGAGTGGCATTGATATCAAACCAGGAACACCTCC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGATCCACTCTCTGGGTTTaGCCTCCTATCTGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRSTLWV*PPICLF
Trigger: GAACAAACAGATAGGAGGCAAAACCCAGAGAGTGGA...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 90 bp GGATCTGACCCCCACATCATTCGAGGTTCAGAAAGTGAAATTCCATaGTCTCTTGCAGATCTAGCTATATGCTCAAATGACTCAGAGCTA +
Preference number: 5 (lower is better)
Translates to: GSDPHIIRGSESEIP*SLADLAICSNDSEL
Trigger: TAGCTCTGAGTCATTTGAGCATATAGCTAGATCTGCAAGAGATCATGGAATTTCACTTTCTGAACCTCGAATGATGTGGGGGTCAGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 90 bp TTCTTCTCTTCTGTTGGAGCTTGGTCTTGGACCCCACCGAGTTTCTaGTTTAGATTTATAGACTTTCTCTGGTTTAGGCCCTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: FFSSVGAWSWTPPSF*FRFIDFLWFRPFRR
Trigger: TCTTCTGAAGGGCCTAAACCAGAGAAAGTCTATAAATCTAAATCAGAAACTCGGTGGGGTCCAAGACCAAGCTCCAACAGAAGAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 90 bp GGTGTCTTATTTCCAGAAATGTCCGCAGGTGGATTAACTGGTTCTTaGACAACATTATTAGCTGTGCCATTTGAGGGTACCAACACCTCA +
Preference number: 5 (lower is better)
Translates to: GVLFPEMSAGGLTGS*TTLLAVPFEGTNTS
Trigger: TGAGGTGTTGGTACCCTCAAATGGCACAGCTAATAATGTTGTTCAAGAACCAGTTAATCCACCTGCGGACATTTCTGGAAATAAGACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 90 bp GTTAATGACTTTCTCAGGTGGCTTTTCTTCTTTGACTGTCGGTGCTaGAACGCTTTGCTGGTTTACAGTTTTAACTACAGGTTCTACCTG +
Preference number: 5 (lower is better)
Translates to: VNDFLRWLFFFDCRC*NALLVYSFNYRFYL
Trigger: CAGGTAGAACCTGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCCACCTGAGAAAGTCATTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACTTGTCTTCCAGGTATTaGTCGATCTGGAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNLSSRY*SIWRWG
Trigger: CCCCCACCTCCAGATCGACAAATACCTGGAAGACAA...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTTTGCAGTTTCAGGCCTaGCATCCCCAGTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLLQFQA*HPQFLQ
Trigger: CTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCAA...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCTTCTTCTCTTCTGTaGGAGCTTGGTCTTGGACCC +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIPSSLL*ELGLGP
Trigger: GGGTCCAAGACCAAGCTCCAACAGAAGAGAAGAAGG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTCCTTCTTCTCTTCTGTaGGAGCTTGGTCTTGGACCC +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTPSSLL*ELGLGP
Trigger: GGGTCCAAGACCAAGCTCCAACAGAAGAGAAGAAGG...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGAATGTTTAGAAACCGGCTTGACAGGTTTTTaGTTCTCAGGCCGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: QKTTDLKSLANVLECLETGLTGF*FSGRSS
Trigger: AGAGGAACGGCCTGAGAACAAAAAACCTGTCAAGCC...GGTTTCTAAACATTCAAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCTTGTAGGCTCCCCTTaGGGAAGGAAACCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYLVGSP*GRKPGL
Trigger: TAAACCTGGTTTCCTTCCCAAAGGGGAGCCTACAAG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGAGGTTCTGCCTGCCTaGTGTTCCACTGATTGTCTC +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIEVLPA*CSTDCL
Trigger: GAGACAATCAGTGGAACACAAGGCAGGCAGAACCTC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TTATTTGACTTCACTTTCCCTACCCACCCATCCCCAATAAACCACAGCCTTTACATTTTCGCTCAAATTTaGGAGGTCGTTTATCTGCCG +
Preference number: 5 (lower is better)
Translates to: LFDFTFPTHPSPINHSLYIFAQI*EVVYLP
Trigger: CGGCAGATAAACGACCTCCAAAATTTGAGCGAAAAT...GTAAAGGCTGTGGTTTATTGGGGATGGGTGGGTAGGGAAAGTGAAGTCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGACCTTTTCTCGTAGATTaGGAGAATTCTCCCATGCCT +
Preference number: 5 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRPFLVD*ENSPMP
Trigger: AGGCATGGGAGAATTCTCCAAATCTACGAGAAAAGG...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACACTGTGAAAAGTGACTaGCAGAAGGTAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYTVKSD*QKVGCW
Trigger: CCAGCAGCCTACCTTCTGCAAGTCACTTTTCACAGT...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGAAAGGCTGGCTTACTaGGGCAGGACGGCTCAAACT +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKERLAY*GRTAQT
Trigger: AGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTTC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTCTAGGACCAAATGTCTaGTGGCTGAGTCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTLGPNV*WLSPLP
Trigger: GGGAAGAGGACTCAGCCACAAGACATTTGGTCCTAG...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATATTACTGGCCCATGATTaGGGAGCAGGTGCTACTTCT +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCILLAHD*GAGATS
Trigger: AGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAA...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTTTCAGGTTCTGCTTCTaGTACCACTTGTGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLFRFCF*YHLCGL
Trigger: GAGACCACACAAGTGGTACAAGAAGCAGAACCTGAA...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTTCAGGTTCTGCTTCTaGTACCACTTGTGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYFRFCF*YHLCGL
Trigger: GAGACCACACAAGTGGTACAAGAAGCAGAACCTGAA...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGGCCGTTCCTCTCTTTaGGGAAGTTTCCCTTTGCTT +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAGRSSL*GSFPLL
Trigger: AAGCAAAGGGAAACTTCCCAAAAGAGAGGAACGGCC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGACTTGTAGGCTCCCCTTaGGGAAGGAAACCAGGTTTA +
Preference number: 5 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGLVGSP*GRKPGL
Trigger: TAAACCTGGTTTCCTTCCCAAAGGGGAGCCTACAAG...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAAATTCCTTCCTGATTaGGGTGGGCCATTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRKFLPD*GGPLLP
Trigger: TGGCAACAATGGCCCACCCAAATCAGGAAGGAATTT...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTCTCTCTTCCCACCTTTaGATGGTGGGCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTLSSHL*MVGHFF
Trigger: GAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGAG...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGAGCCTGTGAGCACCAAACTGAATaGTGTCAATTCCAATTTCAA +
Preference number: 5 (lower is better)
Translates to: LVYKPTEDANVTPEVRACEHQTE*CQFQFQ
Trigger: TTGAAATTGGAATTGACACAATTCAGTTTGGTGCTC...ACAGGCTCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGACAGGAACTTTATCAGTaGCTTTCTCTGAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRQELYQ*LSLKAQ
Trigger: CTGTGCTTTCAGAGAAAGCAACTGATAAAGTTCCTG...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTACTGTGAAAAGTGACTaGCAGAAGGTAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTTVKSD*QKVGCW
Trigger: CCAGCAGCCTACCTTCTGCAAGTCACTTTTCACAGT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGAGAGCACTGGGGGATaGGGCAGTGTTATAAAAATT +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRESTGG*GSVIKI
Trigger: AATTTTTATAACACTGCCCAATCCCCCAGTGCTCTC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAGGAGGTGTTCCTGGTTaGATATCAATGCCACTCCCA +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIGGVPG*ISMPLP
Trigger: TGGGAGTGGCATTGATATCAAACCAGGAACACCTCC...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGGAGGTGTTCCTGGTTaGATATCAATGCCACTCCCA +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAGGVPG*ISMPLP
Trigger: TGGGAGTGGCATTGATATCAAACCAGGAACACCTCC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 90 bp AAAATTTGTCTGACCAGGCTGCTGTACTTGTCCAGAGTAAAGATTTaGGGCTTGAGTAAGATTTGCTCTTGCCTGAAGAAGATGTGTATC +
Preference number: 5 (lower is better)
Translates to: KICLTRLLYLSRVKI*GLSKICSCLKKMCI
Trigger: GATACACATCTTCTTCAGGCAAGAGCAAATCTTACTCAAGCCTCAAATCTTTACTCTGGACAAGTACAGCAGCCTGGTCAGACAAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 90 bp GATAACCTTAGGTATGCTAACAGACGGCTCATTTCTTTGTTCCTCTaGATTCTGAGCATGGTTAGATCCATGAGAAACACTTCTTTTTCG +
Preference number: 5 (lower is better)
Translates to: DNLRYANRRLISLFL*ILSMVRSMRNTSFS
Trigger: CGAAAAAGAAGTGTTTCTCATGGATCTAACCATGCTCAGAATGCAGAGGAACAAAGAAATGAGCCGTCTGTTAGCATACCTAAGGTTATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 90 bp TTTGTTAATGACTTTCTCAGGTGGCTTTTCTTCTTTGACTGTCGGTaGTGCAACGCTTTGCTGGTTTACAGTTTTAACTACAGGTTCTAC +
Preference number: 5 (lower is better)
Translates to: FVNDFLRWLFFFDCR*CNALLVYSFNYRFY
Trigger: GTAGAACCTGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCCACCTGAGAAAGTCATTAACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCATTGGATTCCATCTCCTaGCCCACCTTGCTTGTTACT +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDALDSIS*PTLLVT
Trigger: AGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCAA...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGCTCGAAGGCTTTTGTTaGCTTCTGATAATGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRLEGFC*LLIMKV
Trigger: CACCTTCATTATCAGAAGCAAACAAAAGCCTTCGAG...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGAACCTCTACAACAGGCTCTaGGGGTTCAACTTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: THCKLYRLFIFYDLKLRNLYNRL*GFNFFL
Trigger: GAGGAAAAAGTTGAACCCCAAGAGCCTGTTGTAGAG...GTTCCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCGTTGTTTTCACTTTCTaGGTTTTCTGTCGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETVVFTF*VFCRRL
Trigger: GAGCCTGCGACAGAAAACCAAGAAAGTGAAAACAAC...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCATCCTTTTCACTGCGATaGCTGTCCTGCCTAGTGAAA +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDASFSLR*LSCLVK
Trigger: TTTCACTAGGCAGGACAGCAATCGCAGTGAAAAGGA...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGATCCTTTTCACTGCGATaGCTGTCCTGCCTAGTGAAA +
Preference number: 5 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGSFSLR*LSCLVK
Trigger: TTTCACTAGGCAGGACAGCAATCGCAGTGAAAAGGA...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTGAATGTTTAGAAACCCTCTGTCGCCTTCTTTaGGGAACAACCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: QKTTDLKSLANVLECLETLCRLL*GTTSKS
Trigger: TGATTTTGAGGTTGTTCCCAAAAGAAGGCGACAGAG...GGTTTCTAAACATTCAAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGATTTCCCACTCTTCATTaGCCTGATCTGAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRFPTLH*PDLKNS
Trigger: AGAATTCTTCAGATCAGGCAAATGAAGAGTGGGAAA...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACTCTCTTCCCACCTTTaGATGGTGGGCCATTTCTTC +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKLSSHL*MVGHFF
Trigger: GAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGAG...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTCTCTTGACCATTTCTaGTTCCCTCTGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRSLDHF*FPLMKL
Trigger: CAACTTCATCAGAGGGAACAAGAAATGGTCAAGAGA...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGTGCGACCAGGTTTATGTTCTTaGTTTTCTACCAGACTCAAG +
Preference number: 5 (lower is better)
Translates to: YVLVYKPTEDANVTPEVRPGLCS*FSTRLK
Trigger: CTTGAGTCTGGTAGAAAACAAAGAACATAAACCTGG...TCGCACCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTCTGCTTTGGTTTCTTTaGCTGTTTCAGGATCAGTGC +
Preference number: 5 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLLLWFL*LFQDQC
Trigger: GCACTGATCCTGAAACAGCAAAAGAAACCAAAGCAG...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACCCTTTTCTCGTAGATTaGGAGAATTCTCCCATGCCT +
Preference number: 5 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYPFLVD*ENSPMP
Trigger: AGGCATGGGAGAATTCTCCAAATCTACGAGAAAAGG...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATATCCACTCTCTGGGTTTaGCCTCCTATCTGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCISTLWV*PPICLF
Trigger: GAACAAACAGATAGGAGGCAAAACCCAGAGAGTGGA...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGCGTTTCAGGGTTACTaGTATCACTGTCCACTCTCT +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAAFQGY*YHCPLS
Trigger: AGAGAGTGGACAGTGATACAAGTAACCCTGAAACGC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ATAAGCCACAACATTCAGAAAACCACAGACCTAAAAAGCTTAGCCAATGTCCTTCTCGAAGGCTTTTGTTaGCTTCTGATAATGAAGGTG +
Preference number: 5 (lower is better)
Translates to: ISHNIQKTTDLKSLANVLLEGFC*LLIMKV
Trigger: CACCTTCATTATCAGAAGCAAACAAAAGCCTTCGAG...AAGGACATTGGCTAAGCTTTTTAGGTCTGTGGTTTTCTGAATGTTGTGGCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAAGGTGTTTTTGCAGTTaGATCCTCACTGCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKRCFCS*ILTAAL
Trigger: GAGAGCAGCAGTGAGGATCAAACTGCAAAAACACCT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAGTTGTTTTCACTTTCTaGGTTTTCTGTCGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAVVFTF*VFCRRL
Trigger: GAGCCTGCGACAGAAAACCAAGAAAGTGAAAACAAC...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAATCCTTTTCACTGCGATaGCTGTCCTGCCTAGTGAAA +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKSFSLR*LSCLVK
Trigger: TTTCACTAGGCAGGACAGCAATCGCAGTGAAAAGGA...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAAGCCATCTTTTCTaGGCTTCTCCTCTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTESHLF*ASPLAF
Trigger: AAAAGCCAGAGGAGAAGCCAAGAAAAGATGGCTTTC...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTAGACCTCACCTTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCATTTTCGCTCAAATTTaGGAGGTCGTTTATCTGCCG +
Preference number: 5 (lower is better)
Translates to: LDLTLPTRYQMLCLNGETIFAQI*EVVYLP
Trigger: CGGCAGATAAACGACCTCCAAAATTTGAGCGAAAAT...GGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAAGGTGAGGTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GACACACACTGTAAGCTATACAGGCTTTTCATCTTCTATGACCTAAAACTTAGGTCTCTTGACCATTTCTaGTTCCCTCTGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: DTHCKLYRLFIFYDLKLRSLDHF*FPLMKL
Trigger: CAACTTCATCAGAGGGAACAAGAAATGGTCAAGAGA...CCTAAGTTTTAGGTCATAGAAGATGAAAAGCCTGTATAGCTTACAGTGTGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182149.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGATTCAACACCACTCTCTaGACCATTTCTTGTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGFNTTL*TISCSL
Trigger: GAGGGAACAAGAAATGGTCAAGAGAGTGGTGTTGAA...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTCTGCTTTGGTTTCTTTaGCTGTTTCAGGATCAGTGC +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTLLWFL*LFQDQC
Trigger: GCACTGATCCTGAAACAGCAAAAGAAACCAAAGCAG...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACTGCTTTGGTTTCTTTaGCTGTTTCAGGATCAGTGC +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCILLWFL*LFQDQC
Trigger: GCACTGATCCTGAAACAGCAAAAGAAACCAAAGCAG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTTGCCTCCTATCTGTTaGTTCTGTTGCTGTTCAGAG +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTLPPIC*FCCCSE
Trigger: CTCTGAACAGCAACAGAACAAACAGATAGGAGGCAA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACATCCTGTCCCATCTTaGGGCACAATATTCACATTA +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIHPVPS*GTIFTL
Trigger: TAATGTGAATATTGTGCCCAAAGATGGGACAGGATG...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAAATTGACTATTCACTaGGATTCCATCTCCTTGCCC +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAKLTIH*DSISLP
Trigger: GGGCAAGGAGATGGAATCCAAGTGAATAGTCAATTT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGAGATATTTCAGACTGTaGTTTTCGTCTTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRRYFRL*FSSLLP
Trigger: TGGAAGCAAAGACGAAAACAACAGTCTGAAATATCT...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTAAGCAGACTGAGTATTaGTATCAACATGGCGAGGTT +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTKQTEY*YQHGEV
Trigger: AACCTCGCCATGTTGATACAAATACTCAGTCTGCTT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGAATCCATACATCTGTaGATAACCTTAGGTATGCTA +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRRESIHL*ITLGML
Trigger: TAGCATACCTAAGGTTATCAACAGATGTATGGATTC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGAAAGCCATCTTTTCTaGGCTTCTCCTCTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKESHLF*ASPLAF
Trigger: AAAAGCCAGAGGAGAAGCCAAGAAAAGATGGCTTTC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAGTTGATGTTTCTGTaGATGGTGGTTTCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYKLMFL*MVVSLV
Trigger: AACCAGAGAAACCACCATCAACAGAAACATCAACTT...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCACAAAGGTTTCTCATCTaGAGATGGCTTCTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDAQRFLI*RWLLSQ
Trigger: TTGACTCAGAAGCCATCTCAAGATGAGAAACCTTTG...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTATTTTCGCTCAAATTTaGGAGGTCGTTTATCTGCCG +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTIFAQI*EVVYLP
Trigger: CGGCAGATAAACGACCTCCAAAATTTGAGCGAAAAT...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp CTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAATGTTACACCGGAGGGAGCACCAAACTGAATaGTGTCAATTCCAATTTCAA +
Preference number: 5 (lower is better)
Translates to: LFTYLYTNQLKMQMLHRREHQTE*CQFQFQ
Trigger: TTGAAATTGGAATTGACACAATTCAGTTTGGTGCTC...CCTCCGGTGTAACATTTGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TTACCAACACGTTATCAAATGTTATGTTTAAATGGTGAGACCTCCAAGGAAGGACAGGAACTTTATCAGTaGCTTTCTCTGAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: LPTRYQMLCLNGETSKEGQELYQ*LSLKAQ
Trigger: CTGTGCTTTCAGAGAAAGCAACTGATAAAGTTCCTG...TCCTTCCTTGGAGGTCTCACCATTTAAACATAACATTTGATAACGTGTTGGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCTTTTCTCGTAGATTaGGAGAATTCTCCCATGCCT +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKPFLVD*ENSPMP
Trigger: AGGCATGGGAGAATTCTCCAAATCTACGAGAAAAGG...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAGAGAGCACTGGGGGATaGGGCAGTGTTATAAAAATT +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKESTGG*GSVIKI
Trigger: AATTTTTATAACACTGCCCAATCCCCCAGTGCTCTC...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACTCGAAGGCTTTTGTTaGCTTCTGATAATGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKLEGFC*LLIMKV
Trigger: CACCTTCATTATCAGAAGCAAACAAAAGCCTTCGAG...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACGAATCCATACATCTGTaGATAACCTTAGGTATGCTA +
Preference number: 5 (lower is better)
Translates to: CSLGLNCMHLQTVYVLVYESIHL*ITLGML
Trigger: TAGCATACCTAAGGTTATCAACAGATGTATGGATTC...GTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp ATGCTCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATAAAGTTGATGTTTCTGTaGATGGTGGTTTCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: MLLRTKLYALTDCLRTCIKLMFL*MVVSLV
Trigger: AACCAGAGAAACCACCATCAACAGAAACATCAACTT...TATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGAGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACAAAGGTTTCTCATCTaGAGATGGCTTCTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKQRFLI*RWLLSQ
Trigger: TTGACTCAGAAGCCATCTCAAGATGAGAAACCTTTG...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp GGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTTTTCCCACTCTTCATTaGCCTGATCTGAAGAATTCT +
Preference number: 5 (lower is better)
Translates to: GLNCMHLQTVYVLVYKPTFPTLH*PDLKNS
Trigger: AGAATTCTTCAGATCAGGCAAATGAAGAGTGGGAAA...AGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACCAACTGAAGATGCAAGATATTTCAGACTGTaGTTTTCGTCTTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: CMHLQTVYVLVYKPTEDARYFRL*FSSLLP
Trigger: TGGAAGCAAAGACGAAAACAACAGTCTGAAATATCT...TGCATCTTCAGTTGGTTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAAAGTTGATGTTTCTGTaGATGGTGGTTTCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKKLMFL*MVVSLV
Trigger: AACCAGAGAAACCACCATCAACAGAAACATCAACTT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAACATCATCATTCAGATTaGACTGGGGGTCTTCAATTA +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKHHHSD*TGGLQL
Trigger: TAATTGAAGACCCCCAGTCAAATCTGAATGATGATG...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS-3UTR CAA 90 bp TCCTTAGGACTAAACTGTATGCACTTACAGACTGTTTACGTACTTGTATACAAAAGATATTTCAGACTGTaGTTTTCGTCTTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: SLGLNCMHLQTVYVLVYKRYFRL*FSSLLP
Trigger: TGGAAGCAAAGACGAAAACAACAGTCTGAAATATCT...TTTGTATACAAGTACGTAAACAGTCTGTAAGTGCATACAGTTTAGTCCTAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 72 bp GCCTGTGGTCAGCGGAGGAGGCATCTGACTGGCCAGTaGCATTGGTGGCCTCTGTACAGGCGCTGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: ACGQRRRHLTGQ*HWWPLYRRWEG
Trigger: ACCTTCCCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGTCAGATGCCTCCTCCGCTGACCACAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS TCA 72 bp TGGCTCATGAGGCCTGTGGTCAGCGGAGGAGGCATCTaGCTGGCCAGTGCCATTGGTGGCCTCTGTACAGGC +
Preference number: 6 (lower is better)
Translates to: WLMRPVVSGGGI*LASAIGGLCTG
Trigger: GCCTGTACAGAGGCCACCAATGGCACTGGCCAGTCAGATGCCTCCTCCGCTGACCACAGGCCTCATGAGCCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS TCA 72 bp GACCCCTGGCTACATGTGGCAAACGAGCATGGCTCATaGGGCCTGTGGTCAGCGGAGGAGGCATCTGACTGG +
Preference number: 6 (lower is better)
Translates to: DPWLHVANEHGS*GLWSAEEASDW
Trigger: CCAGTCAGATGCCTCCTCCGCTGACCACAGGCCTCATGAGCCATGCTCGTTTGCCACATGTAGCCAGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS GCA 72 bp AACCTCTGCTCTCTGCTTTGCCTGGGGTGCAAACTGTaGAGGAAACGGCTGTGCCATGCGCACTGTGGCGGG +
Preference number: 6 (lower is better)
Translates to: NLCSLLCLGCKL*RKRLCHAHCGG
Trigger: CCCGCCACAGTGCGCATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAGGCAAAGCAGAGAGCAGAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS GCA 72 bp TCCTCTTCCCACAGCTCTCTTCTGGGGTGCAAACTGTaGAGGAAACGGCTGTGCCATGCGCACTGTGGCGGG +
Preference number: 6 (lower is better)
Translates to: SSSHSSLLGCKL*RKRLCHAHCGG
Trigger: CCCGCCACAGTGCGCATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAGAAGAGAGCTGTGGGAAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS CCA 72 bp GGTCAGCGGAGGAGGCATCTGACTGGCCAGTGCCATTaGTGGCCTCTGTACAGGCGCTGGGAAGGTGTTAGT +
Preference number: 6 (lower is better)
Translates to: GQRRRHLTGQCH*WPLYRRWEGVS
Trigger: ACTAACACCTTCCCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGTCAGATGCCTCCTCCGCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CCA 72 bp CCACAAGGACCCCTGGCTACATGTGGCAAACGAGCATaGCTCATGAGGCCTGTGGTCAGCGGAGGAGGCATC +
Preference number: 6 (lower is better)
Translates to: PQGPLATCGKRA*LMRPVVSGGGI
Trigger: GATGCCTCCTCCGCTGACCACAGGCCTCATGAGCCATGCTCGTTTGCCACATGTAGCCAGGGGTCCTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CAA 90 bp AGCGGCCTCTCTCTCTCTCAGCCGTCTAAATCGAGGTGGCTTATCTaGCCTTGGTGGTCGGGTAGGTCGCTGCCTTCGGGGCCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: SGLSLSQPSKSRWLI*PWWSGRSLPSGPLS
Trigger: AGAGAGAGGCCCCGAAGGCAGCGACCTACCCGACCACCAAGGCAAGATAAGCCACCTCGATTTAGACGGCTGAGAGAGAGAGAGGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 72 bp CTCTCTCTCAGCCGTCTAAATCGAGGTGGCTTATCTTaGCTTGGTGGTCGGGTAGGTCGCTGCCTTCGGGGC +
Preference number: 6 (lower is better)
Translates to: LSLSRLNRGGLS*LGGRVGRCLRG
Trigger: GCCCCGAAGGCAGCGACCTACCCGACCACCAAGGCAAGATAAGCCACCTCGATTTAGACGGCTGAGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 72 bp CAGGTTAGGCTGAGAGAGAATCTGGGGTGCAAACTGTaGAGGAAACGGCTGTGCCATGCGCACTGTGGCGGG +
Preference number: 6 (lower is better)
Translates to: QVRLRENLGCKL*RKRLCHAHCGG
Trigger: CCCGCCACAGTGCGCATGGCACAGCCGTTTCCTGCACAGTTTGCACCCCAGATTCTCTCTCAGCCTAACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CCA 72 bp CAGCCGTCTAAATCGAGGTGGCTTATCTTGCCTTGGTaGTCGGGTAGGTCGCTGCCTTCGGGGCCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: QPSKSRWLILPW*SGRSLPSGPLS
Trigger: AGAGAGAGGCCCCGAAGGCAGCGACCTACCCGACCACCAAGGCAAGATAAGCCACCTCGATTTAGACGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp TCTCAGCCGTCTAAATCGAGGTGGCTTATCTTGCCTTaGTGGTCGGGTAGGTCGCTGCCTTCGGGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: SQPSKSRWLILP*WSGRSLPSGPL
Trigger: GAGAGGCCCCGAAGGCAGCGACCTACCCGACCACCAAGGCAAGATAAGCCACCTCGATTTAGACGGCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp CAGCGGAGGAGGCATCTGACTGGCCAGTGCCATTGGTaGCCTCTGTACAGGCGCTGGGAAGGTGTTAGTATG +
Preference number: 6 (lower is better)
Translates to: QRRRHLTGQCHW*PLYRRWEGVSM
Trigger: CATACTAACACCTTCCCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGTCAGATGCCTCCTCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS TCA 72 bp CGCAGCCTGGGCCTGATTACCTCTGACTCCAGACAGTaGTCCACAAGGACCCCTGGCTACATGTGGCAAACG +
Preference number: 6 (lower is better)
Translates to: RSLGLITSDSRQ*STRTPGYMWQT
Trigger: CGTTTGCCACATGTAGCCAGGGGTCCTTGTGGATCACTGTCTGGAGTCAGAGGTAATCAGGCCCAGGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS GCA 72 bp TGTGAGGGCACAGTCTGTGGAAGCACACCTTGCTGCTaGTGCTGCTGCTGCTGCTGCCACTGTTGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: CEGTVCGSTPCC*CCCCCCHCCCF
Trigger: GAAACAGCAACAGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGTGTGCTTCCACAGACTGTGCCCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp CTCCTTGCCCACCTTGCTTGTTACTGGCCCATGATTTaGGAGCAGGTGCTACTTCTGGGGGAGCTGCAACCC +
Preference number: 6 (lower is better)
Translates to: LLAHLACYWPMI*EQVLLLGELQP
Trigger: GGGTTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp AGCGGCCTCTCTCTCTCTCAGCCGTCTAAATCGAGGTaGCTTATCTTGCCTTGGTGGTCGGGTAGGTCGCTG +
Preference number: 6 (lower is better)
Translates to: SGLSLSQPSKSR*LILPWWSGRSL
Trigger: CAGCGACCTACCCGACCACCAAGGCAAGATAAGCCACCTCGATTTAGACGGCTGAGAGAGAGAGAGGCCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp CGATCTGGAGGTGGGGGATGCTGTTGTGCAAGCAACTaGGGAGGTGGTGGCAAGTGTGAAGATGGGCCACGT +
Preference number: 6 (lower is better)
Translates to: RSGGGGCCCASN*GGGGKCEDGPR
Trigger: ACGTGGCCCATCTTCACACTTGCCACCACCTCCCAAGTTGCTTGCACAACAGCATCCCCCACCTCCAGATCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CAA 72 bp TCTCTCTCTCAGCCGTCTAAATCGAGGTGGCTTATCTaGCCTTGGTGGTCGGGTAGGTCGCTGCCTTCGGGG +
Preference number: 6 (lower is better)
Translates to: SLSQPSKSRWLI*PWWSGRSLPSG
Trigger: CCCCGAAGGCAGCGACCTACCCGACCACCAAGGCAAGATAAGCCACCTCGATTTAGACGGCTGAGAGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp GCCTTGGCAAGTTCCTGGTGCTGGACAGCTGGGAAGTaGTGGATAGCTGTACCAGAGAGGACCACGGAAGGC +
Preference number: 6 (lower is better)
Translates to: ALASSWCWTAGK*WIAVPERTTEG
Trigger: GCCTTCCGTGGTCCTCTCTGGTACAGCTATCCACAACTTCCCAGCTGTCCAGCACCAGGAACTTGCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 72 bp TCCATCTCCTTGCCCACCTTGCTTGTTACTGGCCCATaGTTTGGGAGCAGGTGCTACTTCTGGGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SISLPTLLVTGP*FGSRCYFWGSC
Trigger: GCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp AAAGGCTGGCTTACTTGGGCAGGACGGCTCAAACTCTaGGCCTGTGCTTGTGGGGTCGTGTGCTGTAACTGG +
Preference number: 6 (lower is better)
Translates to: KGWLTWAGRLKL*ACACGVVCCNW
Trigger: CCAGTTACAGCACACGACCCCACAAGCACAGGCTCAGAGTTTGAGCCGTCCTGCCCAAGTAAGCCAGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 72 bp GTTCAGCCTTCAACGCAGCCTGGGCCTGATTACCTCTaGCTCCAGACAGTGATCCACAAGGACCCCTGGCTA +
Preference number: 6 (lower is better)
Translates to: VQPSTQPGPDYL*LQTVIHKDPWL
Trigger: TAGCCAGGGGTCCTTGTGGATCACTGTCTGGAGTCAGAGGTAATCAGGCCCAGGCTGCGTTGAAGGCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CCA 72 bp GATCTGGAGGTGGGGGATGCTGTTGTGCAAGCAACTTaGGAGGTGGTGGCAAGTGTGAAGATGGGCCACGTT +
Preference number: 6 (lower is better)
Translates to: DLEVGDAVVQAT*EVVASVKMGHV
Trigger: AACGTGGCCCATCTTCACACTTGCCACCACCTCCCAAGTTGCTTGCACAACAGCATCCCCCACCTCCAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CCA 72 bp CACGACCCCCATAAGAGCCTCTATAGCTCCGACCTCTaGAGTAATACTCGCCTCTGCCTCGGCCTCTGTATC +
Preference number: 6 (lower is better)
Translates to: HDPHKSLYSSDL*SNTRLCLGLCI
Trigger: GATACAGAGGCCGAGGCAGAGGCGAGTATTACTCCAGAGGTCGGAGCTATAGAGGCTCTTATGGGGGTCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp CCACTGACAGGGTCAGCACCAGCTGTGCCTGAGGCCTaGTCATCAAATGGCCCTCTCTTCCCACCTTTTGAT +
Preference number: 6 (lower is better)
Translates to: PLTGSAPAVPEA*SSNGPLFPPFD
Trigger: ATCAAAAGGTGGGAAGAGAGGGCCATTTGATGACCAGGCCTCAGGCACAGCTGGTGCTGACCCTGTCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp TTGGCAAGTTCCTGGTGCTGGACAGCTGGGAAGTTGTaGATAGCTGTACCAGAGAGGACCACGGAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LASSWCWTAGKL*IAVPERTTEGW
Trigger: CCAGCCTTCCGTGGTCCTCTCTGGTACAGCTATCCACAACTTCCCAGCTGTCCAGCACCAGGAACTTGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp TGGCCTCTGTACAGGCGCTGGGAAGGTGTTAGTATGTaGGGCTCTTACCAATGGAGGGACCAGGTTAGGCTG +
Preference number: 6 (lower is better)
Translates to: WPLYRRWEGVSM*GSYQWRDQVRL
Trigger: CAGCCTAACCTGGTCCCTCCATTGGTAAGAGCCCCACATACTAACACCTTCCCAGCGCCTGTACAGAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CCA 72 bp ACTGGCCAGTGCCATTGGTGGCCTCTGTACAGGCGCTaGGAAGGTGTTAGTATGTGGGGCTCTTACCAATGG +
Preference number: 6 (lower is better)
Translates to: TGQCHWWPLYRR*EGVSMWGSYQW
Trigger: CCATTGGTAAGAGCCCCACATACTAACACCTTCCCAGCGCCTGTACAGAGGCCACCAATGGCACTGGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CAA 72 bp TCTCCTTGCCCACCTTGCTTGTTACTGGCCCATGATTaGGGAGCAGGTGCTACTTCTGGGGGAGCTGCAACC +
Preference number: 6 (lower is better)
Translates to: SPCPPCLLLAHD*GAGATSGGAAT
Trigger: GGTTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp TGGATTCCATCTCCTTGCCCACCTTGCTTGTTACTGGCCCATGATTaGGGAGCAGGTGCTACTTCTGGGGGAGCTGCAACCCCAGGTTTG +
Preference number: 6 (lower is better)
Translates to: WIPSPCPPCLLLAHD*GAGATSGGAATPGL
Trigger: CAAACCTGGGGTTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp TTCCCAGCGGCTACGAAGTCTGTGCCATTAGACGTCTaGGCTGAGGGTAATCTAATCGAGGGTGGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: FPAATKSVPLDV*AEGNLIEGGGC
Trigger: GCAGCCACCACCCTCGATTAGATTACCCTCAGCTCAGACGTCTAATGGCACAGACTTCGTAGCCGCTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 72 bp CAGTGGGGCATAGATAGGGATTGGAATCTGCTGAACTaGTGTCGGCTGCGAGAGACCAGGTTGGAAGCCCTG +
Preference number: 6 (lower is better)
Translates to: QWGIDRDWNLLN*CRLRETRLEAL
Trigger: CAGGGCTTCCAACCTGGTCTCTCGCAGCCGACATCAGTTCAGCAGATTCCAATCCCTATCTATGCCCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 72 bp ACTCAAGTCTGGAAGCTTCTGAGCTTTAATGGGCCCTaGCCGAGGCTGCTTCTGCCGCTGCTCTTTAGGTTC +
Preference number: 6 (lower is better)
Translates to: TQVWKLLSFNGP*PRLLLPLLFRF
Trigger: GAACCTAAAGAGCAGCGGCAGAAGCAGCCTCGGGCAGGGCCCATTAAAGCTCAGAAGCTTCCAGACTTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 72 bp TTCAGAGAAGAACCGCTGCGTGGACTGAAGAACCTCTaGTCTCTGCTTTGCCTGGGGTGCAAACTGTGCAGG +
Preference number: 6 (lower is better)
Translates to: FREEPLRGLKNL*SLLCLGCKLCR
Trigger: CCTGCACAGTTTGCACCCCAGGCAAAGCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS CCA 72 bp GGGAAAGGGGCCTTGTCTTCCAGGTATTTGTCGATCTaGAGGTGGGGGATGCTGTTGTGCAAGCAACTTGGG +
Preference number: 6 (lower is better)
Translates to: GKGALSSRYLSI*RWGMLLCKQLG
Trigger: CCCAAGTTGCTTGCACAACAGCATCCCCCACCTCCAGATCGACAAATACCTGGAAGACAAGGCCCCTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CCA 72 bp TCCACTGATTGTCTCGATAAGCAGGTCTTCTTAAGGTaGCAGGACGTGATGGCCGGCCTCCAGGATCCCTTC +
Preference number: 6 (lower is better)
Translates to: STDCLDKQVFLR*QDVMAGLQDPF
Trigger: GAAGGGATCCTGGAGGCCGGCCATCACGTCCTGCCACCTTAAGAAGACCTGCTTATCGAGACAATCAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp CAAACTGTGCAGGAAACGGCTGTGCCATGCGCACTGTaGCGGGGGCTGACTGGAACTGTTTCTGATACACAA +
Preference number: 6 (lower is better)
Translates to: QTVQETAVPCAL*RGLTGTVSDTQ
Trigger: TTGTGTATCAGAAACAGTTCCAGTCAGCCCCCGCCACAGTGCGCATGGCACAGCCGTTTCCTGCACAGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp CGCTGGGAAGGTGTTAGTATGTGGGGCTCTTACCAATaGAGGGACCAGGTTAGGCTGAGAGAGAATCTGGGG +
Preference number: 6 (lower is better)
Translates to: RWEGVSMWGSYQ*RDQVRLRENLG
Trigger: CCCCAGATTCTCTCTCAGCCTAACCTGGTCCCTCCATTGGTAAGAGCCCCACATACTAACACCTTCCCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS CAA 72 bp AGGCTTGGAGGGAAAGGGGCCTTGTCTTCCAGGTATTaGTCGATCTGGAGGTGGGGGATGCTGTTGTGCAAG +
Preference number: 6 (lower is better)
Translates to: RLGGKGALSSRY*SIWRWGMLLCK
Trigger: CTTGCACAACAGCATCCCCCACCTCCAGATCGACAAATACCTGGAAGACAAGGCCCCTTTCCCTCCAAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CAA 72 bp CTGGAGCTGGGCATGAAGTTAGAACCGGAGCTGGGGTaGACACTGGAACTAGAGCGGTGGCTGATGCCAAAA +
Preference number: 6 (lower is better)
Translates to: LELGMKLEPELG*TLELERWLMPK
Trigger: TTTTGGCATCAGCCACCGCTCTAGTTCCAGTGTCAACCCCAGCTCCGGTTCTAACTTCATGCCCAGCTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 90 bp AGGTTGGAACTGGAGCTGGGCATGAAGTTAGAACCGGAGCTGGGGTaGACACTGGAACTAGAGCGGTGGCTGATGCCAAAATGGGAACTG +
Preference number: 6 (lower is better)
Translates to: RLELELGMKLEPELG*TLELERWLMPKWEL
Trigger: CAGTTCCCATTTTGGCATCAGCCACCGCTCTAGTTCCAGTGTCAACCCCAGCTCCGGTTCTAACTTCATGCCCAGCTCCAGTTCCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 72 bp AGGAAACGGCTGTGCCATGCGCACTGTGGCGGGGGCTaGCTGGAACTGTTTCTGATACACAACACTGTTCAT +
Preference number: 6 (lower is better)
Translates to: RKRLCHAHCGGG*LELFLIHNTVH
Trigger: ATGAACAGTGTTGTGTATCAGAAACAGTTCCAGTCAGCCCCCGCCACAGTGCGCATGGCACAGCCGTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 72 bp TGTGGGGCTCTTACCAATGGAGGGACCAGGTTAGGCTaGGAGAGAATCTGGGGTGCAAACTGTGCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: CGALTNGGTRLG*ERIWGANCAGN
Trigger: GTTTCCTGCACAGTTTGCACCCCAGATTCTCTCTCAGCCTAACCTGGTCCCTCCATTGGTAAGAGCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000028016.16
ENSMUST00000182393.8
ENSMUST00000182660.8
CDS TCA 72 bp TTCTGTTGCTGTTCAGAGAAGAACCGCTGCGTGGACTaGAGAACCTCTGCTCTCTGCTTTGCCTGGGGTGCA +
Preference number: 6 (lower is better)
Translates to: FCCCSEKNRCVD*RTSALCFAWGA
Trigger: TGCACCCCAGGCAAAGCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCTCTGAACAGCAACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS CCA 72 bp CTTGGATTCCATCTCCTTGCCCACCTTGCTTGTTACTaGCCCATGATTTGGGAGCAGGTGCTACTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: LGFHLLAHLACY*PMIWEQVLLLG
Trigger: CCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp ATCGAGCTCCTTCAGTTCGGATGCACTAAGGATGGATaGGCGTTCAGGTTCAGAAGCCCAAGAAGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: IELLQFGCTKDG*AFRFRSPRRRR
Trigger: CCTCCTCCTTCTTGGGCTTCTGAACCTGAACGCCCATCCATCCTTAGTGCATCCGAACTGAAGGAGCTCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CCA 72 bp ACTTTGCTGTCCCATAACTCAGCTGTTAGAGAGCCATaGGACTGTGAAGTGGGCATGGACTTCCCAGCGGCT +
Preference number: 6 (lower is better)
Translates to: TLLSHNSAVREP*DCEVGMDFPAA
Trigger: AGCCGCTGGGAAGTCCATGCCCACTTCACAGTCCCATGGCTCTCTAACAGCTGAGTTATGGGACAGCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp TTGTGGATAGCTGTACCAGAGAGGACCACGGAAGGCTaGGAAAGACTGCTCTGCATAAAGGCTGGCTGCGAT +
Preference number: 6 (lower is better)
Translates to: LWIAVPERTTEG*ERLLCIKAGCD
Trigger: ATCGCAGCCAGCCTTTATGCAGAGCAGTCTTTCCCAGCCTTCCGTGGTCCTCTCTGGTACAGCTATCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp TCACTTGGATTCCTTGCTTGTTACTGGCCCATGATTTaGGAGCAGGTGCTACTTCTGGGGGAGCTGCAACCC +
Preference number: 6 (lower is better)
Translates to: SLGFLACYWPMI*EQVLLLGELQP
Trigger: GGGTTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGAATCCAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182331.2
ENSMUST00000183011.8
CDS TCA 72 bp CTGGCCAAGTTGCTTTTCATCCTGATCAGAGGAAGGTaGCCCAGCAGACTTACCACCATCTCTCCAGCAAGC +
Preference number: 6 (lower is better)
Translates to: LAKLLFILIRGR*PSRLTTISPAS
Trigger: GCTTGCTGGAGAGATGGTGGTAAGTCTGCTGGGTCACCTTCCTCTGATCAGGATGAAAAGCAACTTGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 72 bp GGCTGCTTTTCTATGATCCCGAGCTTCTCATCCAGCTaGTTCAATTTCTCTGCGCACGCTGCCTTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: GCFSMIPSFSSS*FNFSAHAAFLC
Trigger: ACAGAGGAAGGCAGCGTGCGCAGAGAAATTGAAGCAGCTGGATGAGAAGCTCGGGATCATAGAAAAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 72 bp CTCTATAGCTCCGACCTCTGGAGTAATACTCGCCTCTaGCTCGGCCTCTGTATCCTTGGTCTGGAAACCAAT +
Preference number: 6 (lower is better)
Translates to: LYSSDLWSNTRL*LGLCILGLETN
Trigger: ATTGGTTTCCAGACCAAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACTCCAGAGGTCGGAGCTATAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 72 bp GCTTTAATGGGCCCTGCCCGAGGCTGCTTCTGCCGCTaGTCTTTAGGTTCAGGAACTTTATCAGTTGCTTTC +
Preference number: 6 (lower is better)
Translates to: ALMGPARGCFCR*SLGSGTLSVAF
Trigger: GAAAGCAACTGATAAAGTTCCTGAACCTAAAGAGCAGCGGCAGAAGCAGCCTCGGGCAGGGCCCATTAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 72 bp AAGGCAAGACCTGATTGTGCCTTGGCAAGTTCCTGGTaGTGGACAGCTGGGAAGTTGTGGATAGCTGTACCA +
Preference number: 6 (lower is better)
Translates to: KARPDCALASSW*WTAGKLWIAVP
Trigger: TGGTACAGCTATCCACAACTTCCCAGCTGTCCAGCACCAGGAACTTGCCAAGGCACAATCAGGTCTTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp GTTTGTTCTGTTGCTGTTCAGAGAAGAACCGCTGCGTaGACTGAAGAACCTCTGCTCTCTGCTTTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: VCSVAVQRRTAA*TEEPLLSALPG
Trigger: CCCAGGCAAAGCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCTCTGAACAGCAACAGAACAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182593.8
ENSMUST00000183223.8
CDS CAA 72 bp GCTGTGCCATTTGAGGGTACCAACACCTCACTTGTCTaGGAAGCGGCCTCTCTCTCTCTCAGCCGTCTAAAT +
Preference number: 6 (lower is better)
Translates to: AVPFEGTNTSLV*EAASLSLSRLN
Trigger: ATTTAGACGGCTGAGAGAGAGAGAGGCCGCTTCCAAGACAAGTGAGGTGTTGGTACCCTCAAATGGCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp GGAATTCTTCTGTCCTGCACCATTAGGCACACCTTCTaGGTGGTGTGCAGAGTTACCACTGACAGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: GILLSCTIRHTF*VVCRVTTDRVS
Trigger: GCTGACCCTGTCAGTGGTAACTCTGCACACCACCAAGAAGGTGTGCCTAATGGTGCAGGACAGAAGAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 72 bp TTCACTTGGATTCCTTGCTTGTTACTGGCCCATGATTaGGGAGCAGGTGCTACTTCTGGGGGAGCTGCAACC +
Preference number: 6 (lower is better)
Translates to: FTWIPCLLLAHD*GAGATSGGAAT
Trigger: GGTTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGAATCCAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182331.2
ENSMUST00000183011.8
CDS CAA 90 bp AGGTCGAGGTTGAGCCCCCGATTCAGGTTCTGCTTCTTGTACCACTaGTGTGGTCTCCTTTTCACTGCGATTGCTGTCCTGCCTAGTGAA +
Preference number: 6 (lower is better)
Translates to: RSRLSPRFRFCFLYH*CGLLFTAIAVLPSE
Trigger: TTCACTAGGCAGGACAGCAATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAGAAGCAGAACCTGAATCGGGGGCTCAACCTCGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp GAAATAGCCAGGTCGAGGTTGAGCCCCCGATTCAGGTTCTGCTTCTaGTACCACTTGTGTGGTCTCCTTTTCACTGCGATTGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: EIARSRLSPRFRFCF*YHLCGLLFTAIAVL
Trigger: CAGGACAGCAATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAGAAGCAGAACCTGAATCGGGGGCTCAACCTCGACCTGGCTATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp AGCATCCTTGGAATTCTTCTGTCCTGCACCATTAGGCACACCTTCTaGGTGGTGTGCAGAGTTACCACTGACAGGGTCAGCACCAGCTGT +
Preference number: 6 (lower is better)
Translates to: SILGILLSCTIRHTF*VVCRVTTDRVSTSC
Trigger: ACAGCTGGTGCTGACCCTGTCAGTGGTAACTCTGCACACCACCAAGAAGGTGTGCCTAATGGTGCAGGACAGAAGAATTCCAAGGATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 90 bp CCGACCTCTGGAGTAATACTCGCCTCTGCCTCGGCCTCTGTATCCTaGGTCTGGAAACCAATCCCTATCTCTAGCTTCTTTCCAATAGGT +
Preference number: 6 (lower is better)
Translates to: PTSGVILASASASVS*VWKPIPISSFFPIG
Trigger: ACCTATTGGAAAGAAGCTAGAGATAGGGATTGGTTTCCAGACCAAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACTCCAGAGGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp ACATTATTAGCTGTGCCATTTGAGGGTACCAACACCTCACTTGTCTaGGAAGCGGCCTCTCTCTCTCTCAGCCGTCTAAATCGAGGTGGC +
Preference number: 6 (lower is better)
Translates to: TLLAVPFEGTNTSLV*EAASLSLSRLNRGG
Trigger: GCCACCTCGATTTAGACGGCTGAGAGAGAGAGAGGCCGCTTCCAAGACAAGTGAGGTGTTGGTACCCTCAAATGGCACAGCTAATAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp CCTTTGCTTACACTGTCTTTGTCACTCGCACTTTCATaGACCTCACTGTCCGTGTCCGTCTCAGAACCCCTC +
Preference number: 6 (lower is better)
Translates to: PLLTLSLSLALS*TSLSVSVSEPL
Trigger: GAGGGGTTCTGAGACGGACACGGACAGTGAGGTTCATGAAAGTGCGAGTGACAAAGACAGTGTAAGCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp ACACATAAACCTGCGGGCTCTGCTGCTGCTGTGCAATaGGGGAAGGCATACAGCTCAACTGTGAAAAGTGAC +
Preference number: 6 (lower is better)
Translates to: THKPAGSAAAVQ*GKAYSSTVKSD
Trigger: GTCACTTTTCACAGTTGAGCTGTATGCCTTCCCTCATTGCACAGCAGCAGCAGAGCCCGCAGGTTTATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 72 bp ACTATTCACTTGGATTCCTTGCTTGTTACTGGCCCATaGTTTGGGAGCAGGTGCTACTTCTGGGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: TIHLDSLLVTGP*FGSRCYFWGSC
Trigger: GCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGAATCCAAGTGAATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182331.2
ENSMUST00000183011.8
CDS GCA 72 bp ATAGCCAGGTCGAGGTTGAGCCCCCGATTCAGGTTCTaGTTCTTGTACCACTTGTGTGGTCTCCTTTTCACT +
Preference number: 6 (lower is better)
Translates to: IARSRLSPRFRF*FLYHLCGLLFT
Trigger: AGTGAAAAGGAGACCACACAAGTGGTACAAGAAGCAGAACCTGAATCGGGGGCTCAACCTCGACCTGGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp GAATTCTTCTGTCCTGCACCATTAGGCACACCTTCTTaGTGGTGTGCAGAGTTACCACTGACAGGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: EFFCPAPLGTPS*WCAELPLTGSA
Trigger: TGCTGACCCTGTCAGTGGTAACTCTGCACACCACCAAGAAGGTGTGCCTAATGGTGCAGGACAGAAGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp TTGAAGTCTGCTGAAAGGCAAGACCTGATTGTGCCTTaGCAAGTTCCTGGTGCTGGACAGCTGGGAAGTTGT +
Preference number: 6 (lower is better)
Translates to: LKSAERQDLIVP*QVPGAGQLGSC
Trigger: ACAACTTCCCAGCTGTCCAGCACCAGGAACTTGCCAAGGCACAATCAGGTCTTGCCTTTCAGCAGACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp TGGACTAGATGTTGGCGTGGTGCTTCGACCACCAATTaGAGGTGTTCCTGGTTTGATATCAATGCCACTCCC +
Preference number: 6 (lower is better)
Translates to: WTRCWRGASTTN*RCSWFDINATP
Trigger: GGGAGTGGCATTGATATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGCACCACGCCAACATCTAGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 72 bp TTGAGCCCCCGATTCAGGTTCTGCTTCTTGTACCACTaGTGTGGTCTCCTTTTCACTGCGATTGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: LSPRFRFCFLYH*CGLLFTAIAVL
Trigger: CAGGACAGCAATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAGAAGCAGAACCTGAATCGGGGGCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp CCTGAAAAATTCCTTCCTGATTTGGGTGGGCCATTGTaGCCACGACGATTCTGGCGATCAACTCCAGGTCTC +
Preference number: 6 (lower is better)
Translates to: PEKFLPDLGGPL*PRRFWRSTPGL
Trigger: GAGACCTGGAGTTGATCGCCAGAATCGTCGTGGCAACAATGGCCCACCCAAATCAGGAAGGAATTTTTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 72 bp GGACCTGAAAAATTCCTTCCTGATTTGGGTGGGCCATaGTTGCCACGACGATTCTGGCGATCAACTCCAGGT +
Preference number: 6 (lower is better)
Translates to: GPEKFLPDLGGP*LPRRFWRSTPG
Trigger: ACCTGGAGTTGATCGCCAGAATCGTCGTGGCAACAATGGCCCACCCAAATCAGGAAGGAATTTTTCAGGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 90 bp ACCTCACTGTCCGTGTCCGTCTCAGAACCCCTCTGTCGCCTTCTTTaGGGAACAACCTCAAAATCAGAACTCTCACTTCGTGTTTCGCTT +
Preference number: 6 (lower is better)
Translates to: TSLSVSVSEPLCRLL*GTTSKSELSLRVSL
Trigger: AAGCGAAACACGAAGTGAGAGTTCTGATTTTGAGGTTGTTCCCAAAAGAAGGCGACAGAGGGGTTCTGAGACGGACACGGACAGTGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp ATCACTGTCCACTCTCTGGGTTTTGCCTCCTATCTGTTTGTTCTGTaGCTGTTCAGAGAAGAACCGCTGCGTGGACTGAAGAACCTCTGC +
Preference number: 6 (lower is better)
Translates to: ITVHSLGFASYLFVL*LFREEPLRGLKNLC
Trigger: GCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCTCTGAACAGCAACAGAACAAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 72 bp TCTCTCTCCCTTTCTCTAAGTTCCTCTGGAGATGGCTaGTTTTCTATGATCCCGAGCTTCTCATCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SLSLSLSSSGDG*FSMIPSFSSSC
Trigger: GCAGCTGGATGAGAAGCTCGGGATCATAGAAAAGCAGCCATCTCCAGAGGAACTTAGAGAAAGGGAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 72 bp AGTCATATGCTCATGGTCCATTGCAGTTTCAGGCCTTaGATCCCCAGTTTCTTCAGCAGACTTGGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: SHMLMVHCSFRP*IPSFFSRLGSS
Trigger: GCTACTCCCAAGTCTGCTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCAATGGACCATGAGCATATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp TCGTCTTTGCTTCCATATTTCATCGTTATCAGGTACTaGAGGCTTGGAGGGAAAGGGGCCTTGTCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SSLLPYFIVIRY*RLGGKGALSSR
Trigger: CCTGGAAGACAAGGCCCCTTTCCCTCCAAGCCTCCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CCA 72 bp TCGAGGATCCATATAGGACTGCATCATGAGCCACCTTaGGTCAAAACCCATAGAAGCCAGATGTTGAGGGTG +
Preference number: 6 (lower is better)
Translates to: SRIHIGLHHEPP*VKTHRSQMLRV
Trigger: CACCCTCAACATCTGGCTTCTATGGGTTTTGACCCAAGGTGGCTCATGATGCAGTCCTATATGGATCCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp GTTTGTTCTGTTGCTGTTCAGAGAAGAACCGCTGCGTaGACTGAAGAACCTCTGCTCTCTGCTTTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: VCSVAVQRRTAA*TEEPLLSALPS
Trigger: TGAAGGCAAAGCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCTCTGAACAGCAACAGAACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028016.16
ENSMUST00000182660.8
CDS CCA 72 bp GTTTGTTCTGTTGCTGTTCAGAGAAGAACCGCTGCGTaGACTGAAGAACCTCTGCTCTCTGCTTTGCCAACA +
Preference number: 6 (lower is better)
Translates to: VCSVAVQRRTAA*TEEPLLSALPT
Trigger: TGTTGGCAAAGCAGAGAGCAGAGGTTCTTCAGTCCACGCAGCGGTTCTTCTCTGAACAGCAACAGAACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182149.8
CDS CAA 72 bp AGGCATCATAGCTCTATACTGAGAAGCAAGTGCAGGTaGCTGTCCATTCAGTTTGGCCTGTGGAGGACCACA +
Preference number: 6 (lower is better)
Translates to: RHHSSILRSKCR*LSIQFGLWRTT
Trigger: TGTGGTCCTCCACAGGCCAAACTGAATGGACAGCAACCTGCACTTGCTTCTCAGTATAGAGCTATGATGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CAA 72 bp GGAGTAATACTCGCCTCTGCCTCGGCCTCTGTATCCTaGGTCTGGAAACCAATCCCTATCTCTAGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: GVILASASASVS*VWKPIPISSFF
Trigger: AAAGAAGCTAGAGATAGGGATTGGTTTCCAGACCAAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp CACTCTCTGGGTTTTGCCTCCTATCTGTTTGTTCTGTaGCTGTTCAGAGAAGAACCGCTGCGTGGACTGAAG +
Preference number: 6 (lower is better)
Translates to: HSLGFASYLFVL*LFREEPLRGLK
Trigger: CTTCAGTCCACGCAGCGGTTCTTCTCTGAACAGCAACAGAACAAACAGATAGGAGGCAAAACCCAGAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 72 bp GCTGAAATCGTGGTGGCAATGATTTCTGAAACTGTTTaGAATAGCCAGGTCGAGGTTGAGCCCCCGATTCAG +
Preference number: 6 (lower is better)
Translates to: AEIVVAMISETV*NSQVEVEPPIQ
Trigger: CTGAATCGGGGGCTCAACCTCGACCTGGCTATTTCAAACAGTTTCAGAAATCATTGCCACCACGATTTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp CATCTGCTCCTGCTGACGCTGAAATCGTGGTGGCAATaGTTTCTGAAACTGTTTGAAATAGCCAGGTCGAGG +
Preference number: 6 (lower is better)
Translates to: HLLLLTLKSWWQ*FLKLFEIARSR
Trigger: CCTCGACCTGGCTATTTCAAACAGTTTCAGAAATCATTGCCACCACGATTTCAGCGTCAGCAGGAGCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp GGCACATGTTCTGTTCTTGGCTTATTGTCTCTATACTaGGGATACTCACGAGTGTGCCCTCTACCACCTCTG +
Preference number: 6 (lower is better)
Translates to: GTCSVLGLLSLY*GYSRVCPLPPL
Trigger: CAGAGGTGGTAGAGGGCACACTCGTGAGTATCCTCAGTATAGAGACAATAAGCCAAGAACAGAACATGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp CCAGGGATGGTGGAGCCAATCGCGCATGCTGCGTATTaGATAAATGACTTGTATCCATATAGAAGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: PGMVEPIAHAAY*INDLYPYRRLG
Trigger: TCCCAGCCTTCTATATGGATACAAGTCATTTATTCAATACGCAGCATGCGCGATTGGCTCCACCATCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 72 bp ATATGGAGGCATCATAGCTCTATACTGAGAAGCAAGTaGAGGTTGCTGTCCATTCAGTTTGGCCTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: IWRHHSSILRSK*RLLSIQFGLWR
Trigger: CCTCCACAGGCCAAACTGAATGGACAGCAACCTGCACTTGCTTCTCAGTATAGAGCTATGATGCCTCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 72 bp TACAGGATAAGCAGCAGTCATATGCTCATGGTCCATTaGAGTTTCAGGCCTTGCATCCCCAGTTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: YRISSSHMLMVH*SFRPCIPSFFS
Trigger: GCTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCAATGGACCATGAGCATATGACTGCTGCTTATCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp ATACTCGCCTCTGCCTCGGCCTCTGTATCCTTGGTCTaGAAACCAATCCCTATCTCTAGCTTCTTTCCAATA +
Preference number: 6 (lower is better)
Translates to: ILASASASVSLV*KPIPISSFFPI
Trigger: TATTGGAAAGAAGCTAGAGATAGGGATTGGTTTCCAGACCAAGGATACAGAGGCCGAGGCAGAGGCGAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp TTAGAAATGTCATTCAGCACAGCTGGAGCAGCCACTTaGCTGTCCCATAACTCAGCTGTTAGAGAGCCATGG +
Preference number: 6 (lower is better)
Translates to: LEMSFSTAGAAT*LSHNSAVREPW
Trigger: CCATGGCTCTCTAACAGCTGAGTTATGGGACAGCAAAGTGGCTGCTCCAGCTGTGCTGAATGACATTTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 72 bp AAGAGGAAGGTGTGGTGTAGTCTGTTACAGACTCCTTaGCATCAGAGCCATACTCTGCAGAGGAGACTGAGA +
Preference number: 6 (lower is better)
Translates to: KRKVWCSLLQTP*HQSHTLQRRLR
Trigger: TCTCAGTCTCCTCTGCAGAGTATGGCTCTGATGCAAAGGAGTCTGTAACAGACTACACCACACCTTCCTCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp GTGGTGCTTCGACCACCAATTGGAGGTGTTCCTGGTTaGATATCAATGCCACTCCCAAAGGCTTTTAGTTCC +
Preference number: 6 (lower is better)
Translates to: VVLRPPIGGVPG*ISMPLPKAFSS
Trigger: GGAACTAAAAGCCTTTGGGAGTGGCATTGATATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 72 bp CATGCCATAGTTTACCTGCTGGAGAGCACTGGGGGATaGGGCAGTGTTATAAAAATTTGTCTGACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: HAIVYLLESTGG*GSVIKICLTRL
Trigger: CAGCCTGGTCAGACAAATTTTTATAACACTGCCCAATCCCCCAGTGCTCTCCAGCAGGTAAACTATGGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS CAA 90 bp GGACCCGACCTTCTCACAGGCCTATCATTACCTTCTTCTCTTCTGTaGGAGCTTGGTCTTGGACCCCACCGAGTTTCTGATTTAGATTTA +
Preference number: 6 (lower is better)
Translates to: GPDLLTGLSLPSSLL*ELGLGPHRVSDLDL
Trigger: TAAATCTAAATCAGAAACTCGGTGGGGTCCAAGACCAAGCTCCAACAGAAGAGAAGAAGGTAATGATAGGCCTGTGAGAAGGTCGGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp GATGTTGGCGTGGTGCTTCGACCACCAATTGGAGGTGTTCCTGGTTaGATATCAATGCCACTCCCAAAGGCTTTTAGTTCCATTTCAGAC +
Preference number: 6 (lower is better)
Translates to: DVGVVLRPPIGGVPG*ISMPLPKAFSSISD
Trigger: GTCTGAAATGGAACTAAAAGCCTTTGGGAGTGGCATTGATATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGCACCACGCCAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 90 bp CATATATGGAGGCATCATAGCTCTATACTGAGAAGCAAGTGCAGGTaGCTGTCCATTCAGTTTGGCCTGTGGAGGACCACAAGCTATTCT +
Preference number: 6 (lower is better)
Translates to: HIWRHHSSILRSKCR*LSIQFGLWRTTSYS
Trigger: AGAATAGCTTGTGGTCCTCCACAGGCCAAACTGAATGGACAGCAACCTGCACTTGCTTCTCAGTATAGAGCTATGATGCCTCCATATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CAA 90 bp TTTCGTCTTTGCTTCCATATTTCATCGTTATCAGGTACTGGAGGCTaGGAGGGAAAGGGGCCTTGTCTTCCAGGTATTTGTCGATCTGGA +
Preference number: 6 (lower is better)
Translates to: FRLCFHISSLSGTGG*EGKGPCLPGICRSG
Trigger: TCCAGATCGACAAATACCTGGAAGACAAGGCCCCTTTCCCTCCAAGCCTCCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CAA 90 bp ACTGAGATCATCGCCCCAATTTCAGCAGACATTTCGGAGACTGCTTaGGTTTCTTTTGCTGTTTCAGGATCAGTGCTTCTGACCACAGCT +
Preference number: 6 (lower is better)
Translates to: TEIIAPISADISETA*VSFAVSGSVLLTTA
Trigger: AGCTGTGGTCAGAAGCACTGATCCTGAAACAGCAAAAGAAACCAAAGCAGTCTCCGAAATGTCTGCTGAAATTGGGGCGATGATCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 90 bp TTACCTGCTGGAGAGCACTGGGGGATTGGGCAGTGTTATAAAAATTaGTCTGACCAGGCTGCTGTACTTGTCCAGAGTAAAGATTTGAGG +
Preference number: 6 (lower is better)
Translates to: LPAGEHWGIGQCYKN*SDQAAVLVQSKDLR
Trigger: CCTCAAATCTTTACTCTGGACAAGTACAGCAGCCTGGTCAGACAAATTTTTATAACACTGCCCAATCCCCCAGTGCTCTCCAGCAGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS CAA 90 bp TACTGTAACCATGCCATAGTTTACCTGCTGGAGAGCACTGGGGGATaGGGCAGTGTTATAAAAATTTGTCTGACCAGGCTGCTGTACTTG +
Preference number: 6 (lower is better)
Translates to: YCNHAIVYLLESTGG*GSVIKICLTRLLYL
Trigger: CAAGTACAGCAGCCTGGTCAGACAAATTTTTATAACACTGCCCAATCCCCCAGTGCTCTCCAGCAGGTAAACTATGGCATGGTTACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000182393.8
CDS TCA 72 bp AACTCTCACTTCGTGTTTCGCTTTCTTCTCGTTGTCTaGGAGGTCCTGAAGGCACATGTTCTGTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: NSHFVFRFLLVV*EVLKAHVLFLA
Trigger: AGCCAAGAACAGAACATGTGCCTTCAGGACCTCTCAGACAACGAGAAGAAAGCGAAACACGAAGTGAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp TGGTGCTTCGACCACCAATTGGAGGTGTTCCTGGTTTaGTATCAATGCCACTCCCAAAGGCTTTTAGTTCCA +
Preference number: 6 (lower is better)
Translates to: WCFDHQLEVFLV*YQCHSQRLLVP
Trigger: TGGAACTAAAAGCCTTTGGGAGTGGCATTGATATCAAACCAGGAACACCTCCAATTGGTGGTCGAAGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 72 bp TTCCTCCTCACGGCGTTTACGAGCACGCTCTACTGCTaGAGATATTTCAGACTGTTGTTTTCGTCTTTGCTT +
Preference number: 6 (lower is better)
Translates to: FLLTAFTSTLYC*RYFRLLFSSLL
Trigger: AAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGTAGAGCGTGCTCGTAAACGCCGTGAGGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 72 bp TTTGGAGGTCGTTTATCTGCCGGTATAGGCATAAACTaGTCATGTCTTCTTGGTGGCTCTCCATCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: FGGRLSAGIGIN*SCLLGGSPSSG
Trigger: ACCTGAAGATGGAGAGCCACCAAGAAGACATGAGCAGTTTATGCCTATACCGGCAGATAAACGACCTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 72 bp ATTTCAGACATTTTTCCTGTGGTCGCCATCATGCTATaGTGTGTTCCAGCAGGGATTAATCCTCGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: ISDIFPVVAIML*CVPAGINPRKG
Trigger: GCCTTTCCGAGGATTAATCCCTGCTGGAACACAGCATAGCATGATGGCGACCACAGGAAAAATGTCTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 72 bp GTTCCATTTCAGACATTTTTCCTGTGGTCGCCATCATaGTATGCTGTGTTCCAGCAGGGATTAATCCTCGGA +
Preference number: 6 (lower is better)
Translates to: VPFQTFFLWSPS*YAVFQQGLILG
Trigger: TCCGAGGATTAATCCCTGCTGGAACACAGCATAGCATGATGGCGACCACAGGAAAAATGTCTGAAATGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp CATCTCTCCAGCAAGCAACATTTGGAGGGCGTAAACTaGGTCCAGGTCCATAGTTTTCATCATTTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: HLSSKQHLEGVN*VQVHSFHHLLP
Trigger: AGGAAGCAAATGATGAAAACTATGGACCTGGACCCAGTTTACGCCCTCCAAATGTTGCTTGCTGGAGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CCA 72 bp ACTGAGAAGCAAGTGCAGGTTGCTGTCCATTCAGTTTaGCCTGTGGAGGACCACAAGCTATTCTCTTTTCTA +
Preference number: 6 (lower is better)
Translates to: TEKQVQVAVHSV*PVEDHKLFSFL
Trigger: TAGAAAAGAGAATAGCTTGTGGTCCTCCACAGGCCAAACTGAATGGACAGCAACCTGCACTTGCTTCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CAA 72 bp TGCTTCCATATTTCATCGTTATCAGGTACTGGAGGCTaGGAGGGAAAGGGGCCTTGTCTTCCAGGTATTTGT +
Preference number: 6 (lower is better)
Translates to: CFHISSLSGTGG*EGKGPCLPGIC
Trigger: ACAAATACCTGGAAGACAAGGCCCCTTTCCCTCCAAGCCTCCAGTACCTGATAACGATGAAATATGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CAA 72 bp CTGAAAGCACAGGAACCACCTCATTTTCATTCCCGTTaGAGGCCGGAGCACCAAACTGAATTGTGTCAATTC +
Preference number: 6 (lower is better)
Translates to: LKAQEPPHFHSR*RPEHQTELCQF
Trigger: GAATTGACACAATTCAGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAATGAGGTGGTTCCTGTGCTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 72 bp GGAGAGCACTGGGGGATTGGGCAGTGTTATAAAAATTaGTCTGACCAGGCTGCTGTACTTGTCCAGAGTAAA +
Preference number: 6 (lower is better)
Translates to: GEHWGIGQCYKN*SDQAAVLVQSK
Trigger: TTTACTCTGGACAAGTACAGCAGCCTGGTCAGACAAATTTTTATAACACTGCCCAATCCCCCAGTGCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 90 bp AGCACGCTCTACTGCTGCAGATATTTCAGACTGTTGTTTTCGTCTTaGCTTCCATATTTCATCGTTATCAGGTACTGGAGGCTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: STLYCCRYFRLLFSS*LPYFIVIRYWRLGG
Trigger: CCCTCCAAGCCTCCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGTAGAGCGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CAA 90 bp GGTTCTGCTTCTTGTACCACTTGTGTGGTCTCCTTTTCACTGCGATaGCTGTCCTGCCTAGTGAAAATTGGTTCTTCTTCTTTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: GSASCTTCVVSFSLR*LSCLVKIGSSSFLQ
Trigger: CTGCAAGAAAGAAGAAGAACCAATTTTCACTAGGCAGGACAGCAATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAGAAGCAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp TTTCTCAGGTGGCTTTTCTTCTTTGACTGTCGGTGCTGCAACGCTTaGCTGGTTTACAGTTTTAACTACAGGTTCTACCTGGACACTACC +
Preference number: 6 (lower is better)
Translates to: FLRWLFFFDCRCCNA*LVYSFNYRFYLDTT
Trigger: GGTAGTGTCCAGGTAGAACCTGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCCACCTGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp AGGATGAATGGGTGGAATGTCCATAGCAGGCCTTCCTaGTATCATTCGAGGATCCATATAGGACTGCATCAT +
Preference number: 6 (lower is better)
Translates to: RMNGWNVHSRPS*YHSRIHIGLHH
Trigger: ATGATGCAGTCCTATATGGATCCTCGAATGATATCAGGAAGGCCTGCTATGGACATTCCACCCATTCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp TCTGTTGGAGCTTGGTCTTGGACCCCACCGAGTTTCTaGTTTAGATTTATAGACTTTCTCTGGTTTAGGCCC +
Preference number: 6 (lower is better)
Translates to: SVGAWSWTPPSF*FRFIDFLWFRP
Trigger: GGGCCTAAACCAGAGAAAGTCTATAAATCTAAATCAGAAACTCGGTGGGGTCCAAGACCAAGCTCCAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp AACTGGTTCTTGAACAACATTATTAGCTGTGCCATTTaGGGGTACCAACACCTCACTTGTCTTGGAAGCGGC +
Preference number: 6 (lower is better)
Translates to: NWFLNNIISCAI*GYQHLTCLGSG
Trigger: GCCGCTTCCAAGACAAGTGAGGTGTTGGTACCCTCAAATGGCACAGCTAATAATGTTGTTCAAGAACCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp ACTGTTCATTTTGCTAGACTGGCTGTTTGGACTTGTTaGTGTAGCCCTGAATGGACTAGATGTTGGCGTGGT +
Preference number: 6 (lower is better)
Translates to: TVHFARLAVWTC*CSPEWTRCWRG
Trigger: ACCACGCCAACATCTAGTCCATTCAGGGCTACATCAACAAGTCCAAACAGCCAGTCTAGCAAAATGAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 72 bp TCCTCACTGCTGCTCTCTTTAGGACTAGTACTTCCTTaGTCATCATCATCACTGAAGTTCAGCTGTTCTGTG +
Preference number: 6 (lower is better)
Translates to: SSLLLSLGLVLP*SSSSLKFSCSV
Trigger: CACAGAACAGCTGAACTTCAGTGATGATGATGAGCAAGGAAGTACTAGTCCTAAAGAGAGCAGCAGTGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 72 bp GGCTTTTCTTCTTTGACTGTCGGTGCTGCAACGCTTTaGTGGTTTACAGTTTTAACTACAGGTTCTACCTGG +
Preference number: 6 (lower is better)
Translates to: GFSSLTVGAATL*WFTVLTTGSTW
Trigger: CCAGGTAGAACCTGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 72 bp CAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTTaGCTCCTATCTGTTTGTTCTGTTGCTGTTCAGAGA +
Preference number: 6 (lower is better)
Translates to: QGYLYHCPLSGF*LLSVCSVAVQR
Trigger: TCTCTGAACAGCAACAGAACAAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp TTTTGTTTGCTTCTGATAATGAAGGTGGGAACCTCATaGGACCATGTAGAGGAGGATATGCCATCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: FCLLLIMKVGTS*DHVEEDMPSLG
Trigger: ACCCAAGGATGGCATATCCTCCTCTACATGGTCCCATGAGGTTCCCACCTTCATTATCAGAAGCAAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CCA 72 bp CCTCTCTCTAGCCGGGTCAAATTTTCGCTCAAATTTTaGAGGTCGTTTATCTGCCGGTATAGGCATAAACTG +
Preference number: 6 (lower is better)
Translates to: PLSSRVKFSLKF*RSFICRYRHKL
Trigger: CAGTTTATGCCTATACCGGCAGATAAACGACCTCCAAAATTTGAGCGAAAATTTGACCCGGCTAGAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp CTTGAGATGGCTTCTGAGTCAAAGTTGATGTTTCTGTaGATGGTGGTTTCTCTGGTTCTGGCTGTACTGGTG +
Preference number: 6 (lower is better)
Translates to: LEMASESKLMFL*MVVSLVLAVLV
Trigger: CACCAGTACAGCCAGAACCAGAGAAACCACCATCAACAGAAACATCAACTTTGACTCAGAAGCCATCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp TCAGGGTTACTTGTATCACTGTCCACTCTCTGGGTTTaGCCTCCTATCTGTTTGTTCTGTTGCTGTTCAGAG +
Preference number: 6 (lower is better)
Translates to: SGLLVSLSTLWV*PPICLFCCCSE
Trigger: CTCTGAACAGCAACAGAACAAACAGATAGGAGGCAAAACCCAGAGAGTGGACAGTGATACAAGTAACCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 90 bp ACGGCGTTTACGAGCACGCTCTACTGCTGCAGATATTTCAGACTGTaGTTTTCGTCTTTGCTTCCATATTTCATCGTTATCAGGTACTGG +
Preference number: 6 (lower is better)
Translates to: TAFTSTLYCCRYFRL*FSSLLPYFIVIRYW
Trigger: CCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGTAGAGCGTGCTCGTAAACGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CAA 90 bp GTTTCTCATCTTGAGATGGCTTCTGAGTCAAAGTTGATGTTTCTGTaGATGGTGGTTTCTCTGGTTCTGGCTGTACTGGTGGTGAAACCA +
Preference number: 6 (lower is better)
Translates to: VSHLEMASESKLMFL*MVVSLVLAVLVVKP
Trigger: TGGTTTCACCACCAGTACAGCCAGAACCAGAGAAACCACCATCAACAGAAACATCAACTTTGACTCAGAAGCCATCTCAAGATGAGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp CCACCTCATTTTCATTCCCGTTTGAGGCCGGAGCACCAAACTGAATaGTGTCAATTCCAATTTCAACACCACTCTCTTGACCATTTCTTG +
Preference number: 6 (lower is better)
Translates to: PPHFHSRLRPEHQTE*CQFQFQHHSLDHFL
Trigger: CAAGAAATGGTCAAGAGAGTGGTGTTGAAATTGGAATTGACACAATTCAGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAATGAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 72 bp TTGCCACGACGATTCTGGCGATCAACTCCAGGTCTCTaGCTAGAAAAACTTCTCTTCGCTATTTCCCTTTTT +
Preference number: 6 (lower is better)
Translates to: LPRRFWRSTPGL*LEKLLFAISLF
Trigger: AAAAAGGGAAATAGCGAAGAGAAGTTTTTCTAGTCAGAGACCTGGAGTTGATCGCCAGAATCGTCGTGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS GCA 72 bp ACTTGTGTGGTCTCCTTTTCACTGCGATTGCTGTCCTaGCTAGTGAAAATTGGTTCTTCTTCTTTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: TCVVSFSLRLLS*LVKIGSSSFLQ
Trigger: CTGCAAGAAAGAAGAAGAACCAATTTTCACTAGGCAGGACAGCAATCGCAGTGAAAAGGAGACCACACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 72 bp TTTCTCAGGTGGCTTTTCTTCTTTGACTGTCGGTGCTaGAACGCTTTGCTGGTTTACAGTTTTAACTACAGG +
Preference number: 6 (lower is better)
Translates to: FLRWLFFFDCRC*NALLVYSFNYR
Trigger: CCTGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCCACCTGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 72 bp GACTTTCTCAGGTGGCTTTTCTTCTTTGACTGTCGGTaGTGCAACGCTTTGCTGGTTTACAGTTTTAACTAC +
Preference number: 6 (lower is better)
Translates to: DFLRWLFFFDCR*CNALLVYSFNY
Trigger: GTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCCACCTGAGAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp TCTTGTACCACTTGTGTGGTCTCCTTTTCACTGCGATaGCTGTCCTGCCTAGTGAAAATTGGTTCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: SCTTCVVSFSLR*LSCLVKIGSSS
Trigger: AGAAGAAGAACCAATTTTCACTAGGCAGGACAGCAATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp TGGCTTTTCTTCTTTGACTGTCGGTGCTGCAACGCTTaGCTGGTTTACAGTTTTAACTACAGGTTCTACCTG +
Preference number: 6 (lower is better)
Translates to: WLFFFDCRCCNA*LVYSFNYRFYL
Trigger: CAGGTAGAACCTGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp TTTCATTCCCGTTTGAGGCCGGAGCACCAAACTGAATaGTGTCAATTCCAATTTCAACACCACTCTCTTGAC +
Preference number: 6 (lower is better)
Translates to: FHSRLRPEHQTE*CQFQFQHHSLD
Trigger: GTCAAGAGAGTGGTGTTGAAATTGGAATTGACACAATTCAGTTTGGTGCTCCGGCCTCAAACGGGAATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS TCA 72 bp TTTTGTGACTGGAGGCTGAGCAGGTATCTGAGAAGATaGTTTAGTGCTGGAAGCTTCATCTACTTCTTTTCG +
Preference number: 6 (lower is better)
Translates to: FCDWRLSRYLRR*FSAGSFIYFFS
Trigger: CGAAAAGAAGTAGATGAAGCTTCCAGCACTAAATCATCTTCTCAGATACCTGCTCAGCCTCCAGTCACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS TCA 72 bp TTTCCAGAAATGTCCGCAGGTGGATTAACTGGTTCTTaGACAACATTATTAGCTGTGCCATTTGAGGGTACC +
Preference number: 6 (lower is better)
Translates to: FPEMSAGGLTGS*TTLLAVPFEGT
Trigger: GGTACCCTCAAATGGCACAGCTAATAATGTTGTTCAAGAACCAGTTAATCCACCTGCGGACATTTCTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp TCATTTTCATTCCCGTTTGAGGCCGGAGCACCAAACTaGATTGTGTCAATTCCAATTTCAACACCACTCTCT +
Preference number: 6 (lower is better)
Translates to: SFSFPFEAGAPN*IVSIPISTPLS
Trigger: AGAGAGTGGTGTTGAAATTGGAATTGACACAATTCAGTTTGGTGCTCCGGCCTCAAACGGGAATGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CCA 72 bp TCAAATGACTCAGAGCTATTAGGTGACCCTTCCATCTaGTCTCTTCTGATTAACGGCTTAGGAGGAATCATT +
Preference number: 6 (lower is better)
Translates to: SNDSELLGDPSI*SLLINGLGGII
Trigger: AATGATTCCTCCTAAGCCGTTAATCAGAAGAGACCAGATGGAAGGGTCACCTAATAGCTCTGAGTCATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp GATAACCTTAGGTATGCTAACAGACGGCTCATTTCTTaGTTCCTCTGCATTCTGAGCATGGTTAGATCCATG +
Preference number: 6 (lower is better)
Translates to: DNLRYANRRLIS*FLCILSMVRSM
Trigger: CATGGATCTAACCATGCTCAGAATGCAGAGGAACAAAGAAATGAGCCGTCTGTTAGCATACCTAAGGTTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS TCA 72 bp CCCCACATCATTCGAGGTTCAGAAAGTGAAATTCCATaGTCTCTTGCAGATCTAGCTATATGCTCAAATGAC +
Preference number: 6 (lower is better)
Translates to: PHIIRGSESEIP*SLADLAICSND
Trigger: GTCATTTGAGCATATAGCTAGATCTGCAAGAGATCATGGAATTTCACTTTCTGAACCTCGAATGATGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS GCA 72 bp GGACTTTCCTTTGTAAGTGTTAAACAAACTGAGTGTTaGATACTTCTTCCCATCCTTGGCTTTTGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: GLSFVSVKQTEC*ILLPILGFCAL
Trigger: CAGAGCACAAAAGCCAAGGATGGGAAGAAGTATGCAACACTCAGTTTGTTTAACACTTACAAAGGAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182331.2
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 72 bp ACTGCTGCAGATATTTCAGACTGTTGTTTTCGTCTTTaGTTCCATATTTCATCGTTATCAGGTACTGGAGGC +
Preference number: 6 (lower is better)
Translates to: TAADISDCCFRL*FHISSLSGTGG
Trigger: GCCTCCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS GCA 72 bp GTCAAATTTTCGCTCAAATTTTGGAGGTCGTTTATCTaGCGGTATAGGCATAAACTGCTCATGTCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: VKFSLKFWRSFI*RYRHKLLMSSW
Trigger: CCAAGAAGACATGAGCAGTTTATGCCTATACCGGCAGATAAACGACCTCCAAAATTTGAGCGAAAATTTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CCA 72 bp CTTTGCTGGTTTACAGTTTTAACTACAGGTTCTACCTaGACACTACCAACAGGTTCCAAAGGTTTCTCATCT +
Preference number: 6 (lower is better)
Translates to: LCWFTVLTTGST*TLPTGSKGFSS
Trigger: AGATGAGAAACCTTTGGAACCTGTTGGTAGTGTCCAGGTAGAACCTGTAGTTAAAACTGTAAACCAGCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp ACGAGCACGCTCTACTGCTGCAGATATTTCAGACTGTaGTTTTCGTCTTTGCTTCCATATTTCATCGTTATC +
Preference number: 6 (lower is better)
Translates to: TSTLYCCRYFRL*FSSLLPYFIVI
Trigger: GATAACGATGAAATATGGAAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGTAGAGCGTGCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS CAA 90 bp ACATCTGTTGATAACCTTAGGTATGCTAACAGACGGCTCATTTCTTaGTTCCTCTGCATTCTGAGCATGGTTAGATCCATGAGAAACACT +
Preference number: 6 (lower is better)
Translates to: TSVDNLRYANRRLIS*FLCILSMVRSMRNT
Trigger: AGTGTTTCTCATGGATCTAACCATGCTCAGAATGCAGAGGAACAAAGAAATGAGCCGTCTGTTAGCATACCTAAGGTTATCAACAGATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp TTCTCCTCTGGCTTTTCTACAGTTTCTTTGGAATCCATACATCTGTaGATAACCTTAGGTATGCTAACAGACGGCTCATTTCTTTGTTCC +
Preference number: 6 (lower is better)
Translates to: FSSGFSTVSLESIHL*ITLGMLTDGSFLCS
Trigger: GGAACAAAGAAATGAGCCGTCTGTTAGCATACCTAAGGTTATCAACAGATGTATGGATTCCAAAGAAACTGTAGAAAAGCCAGAGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp AAGCCATCTTTTCTTGGCTTCTCCTCTGGCTTTTCTACAGTTTCTTaGGAATCCATACATCTGTTGATAACCTTAGGTATGCTAACAGAC +
Preference number: 6 (lower is better)
Translates to: KPSFLGFSSGFSTVS*ESIHLLITLGMLTD
Trigger: GTCTGTTAGCATACCTAAGGTTATCAACAGATGTATGGATTCCAAAGAAACTGTAGAAAAGCCAGAGGAGAAGCCAAGAAAAGATGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp TACTGCTGCAGATATTTCAGACTGTTGTTTTCGTCTTaGCTTCCATATTTCATCGTTATCAGGTACTGGAGG +
Preference number: 6 (lower is better)
Translates to: YCCRYFRLLFSS*LPYFIVIRYWR
Trigger: CCTCCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183011.8
CDS TCA 72 bp TTCAGAGGCTGTTTCCCACTCTTCATTTGCCTGATCTaGAGAATTCTGATTAGACAAATCTGGTGTCTTATT +
Preference number: 6 (lower is better)
Translates to: FRGCFPLFICLI*RILIRQIWCLI
Trigger: AATAAGACACCAGATTTGTCTAATCAGAATTCTTCAGATCAGGCAAATGAAGAGTGGGAAACAGCCTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182393.8
ENSMUST00000182593.8
ENSMUST00000182660.8
ENSMUST00000183223.8
CDS CAA 72 bp GGCTTTTCTACAGTTTCTTTGGAATCCATACATCTGTaGATAACCTTAGGTATGCTAACAGACGGCTCATTT +
Preference number: 6 (lower is better)
Translates to: GFSTVSLESIHL*ITLGMLTDGSF
Trigger: AAATGAGCCGTCTGTTAGCATACCTAAGGTTATCAACAGATGTATGGATTCCAAAGAAACTGTAGAAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 90 bp GTAAGCTCTTCTGATCAATTACATCAAAACAAGCAGACTGAGTATTaGTATCAACATGGCGAGGTTTTACATCTTCCAGTGATCTGCTTA +
Preference number: 6 (lower is better)
Translates to: VSSSDQLHQNKQTEY*YQHGEVLHLPVICL
Trigger: TAAGCAGATCACTGGAAGATGTAAAACCTCGCCATGTTGATACAAATACTCAGTCTGCTTGTTTTGATGTAATTGATCAGAAGAGCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8
CDS CAA 72 bp TCTGATCAATTACATCAAAACAAGCAGACTGAGTATTaGTATCAACATGGCGAGGTTTTACATCTTCCAGTG +
Preference number: 6 (lower is better)
Translates to: SDQLHQNKQTEY*YQHGEVLHLPV
Trigger: CACTGGAAGATGTAAAACCTCGCCATGTTGATACAAATACTCAGTCTGCTTGTTTTGATGTAATTGATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000028016.16
ENSMUST00000182149.8
ENSMUST00000182593.8
ENSMUST00000182660.8