Pregenerated sensors for PRR5L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032841Ensembl transcript IDs: ENSMUST00000043845.14, ENSMUST00000124802.2, ENSMUST00000125985.8, ENSMUST00000141814.2, ENSMUST00000144549.2, ENSMUST00000154525.2, ENSMUST00000163762.8, ENSMUST00000171088.8
Found 212 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTATaGGGAGCCAGTCATAGACACCAGAGTGGGGAGGCCGACAGATGT | + |
|
Preference number: 1 (lower is better) Translates to: IPVSQARLEVRKTVV*GASHRHQSGEADRC Trigger: ACATCTGTCGGCCTCCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR GCA 90 bp | AGGGCATCAGATCCCATTACAGATGGTTGGGAACCACCATGTGGTTaGTGGGAATTGAACTCAGGACCTGTGGAAGAGCAGTCAGGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: RASDPITDGWEPPCG*WELNSGPVEEQSGL Trigger: GAGCCCTGACTGCTCTTCCACAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTTCCCAACCATCTGTAATGGGATCTGATGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CCA 90 bp | GCATCAGATCCCATTACAGATGGTTGGGAACCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTGTGGAAGAGCAGTCAGGGCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: ASDPITDGWEPPCGC*ELNSGPVEEQSGLL Trigger: TAAGAGCCCTGACTGCTCTTCCACAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTTCCCAACCATCTGTAATGGGATCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 90 bp | ACTAAATCACATCTTTTGGCCTTCTGCAAGAGCAGCAAGTGCCTTTaGGCACCAAGCCACTTCTCCAGCCCCCACCTTGTAGATGTTAGA | + |
|
Preference number: 1 (lower is better) Translates to: TKSHLLAFCKSSKCL*APSHFSSPHLVDVR Trigger: TCTAACATCTACAAGGTGGGGGCTGGAGAAGTGGCTTGGTGCTCAAAGGCACTTGCTGCTCTTGCAGAAGGCCAAAAGATGTGATTTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR GCA 90 bp | TGCGCAAGTGTGTACACCAGAGTGTACTGTCCAGTGCTGTGTTCATaGACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGAAC | + |
|
Preference number: 1 (lower is better) Translates to: CASVYTRVYCPVLCS*THTICIQMPSEEKN Trigger: GTTCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCACTGGACAGTACACTCTGGTGTACACACTTGCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 90 bp | CATAGACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATaGAGACTTGGCTTGTGCCCTAAAGTAAATAAGGCAATATTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: HRHQSGEADRCFPKA*RLGLCPKVNKAILL Trigger: GAGCAATATTGCCTTATTTACTTTAGGGCACAAGCCAAGTCTTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 90 bp | TATCAGCCACCCTCTCATATACACACCAGAAATGTGGCTGGTTCCTaGAACTGGAGTGACGGTAAGGCACCATTTACTGAGAAGGTTCAC | + |
|
Preference number: 1 (lower is better) Translates to: YQPPSHIHTRNVAGS*NWSDGKAPFTEKVH Trigger: GTGAACCTTCTCAGTAAATGGTGCCTTACCGTCACTCCAGTTTCAGGAACCAGCCACATTTCTGGTGTGTATATGAGAGGGTGGCTGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR GCA 90 bp | GTGTATATGTGTGCGCAAGTGTGTACACCAGAGTGTACTGTCCAGTaGTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAG | + |
|
Preference number: 1 (lower is better) Translates to: VYMCAQVCTPECTVQ*CVHAHTLYAFRCPQ Trigger: CTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCACTGGACAGTACACTCTGGTGTACACACTTGCGCACACATATACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR GCA 90 bp | ACTGTCCAGTGCTGTGTTCATGCACACACACTATATGCATTCAGATaGCCTCAGAGGAGAAGAACATCAGATTCTCTGGGTCTAGAGTTA | + |
|
Preference number: 1 (lower is better) Translates to: TVQCCVHAHTLYAFR*PQRRRTSDSLGLEL Trigger: TAACTCTAGACCCAGAGAATCTGATGTTCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCACTGGACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCACCCATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCCAAGAGCCCCCTTGGTaGTCCATGGAGGAGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: STHWLLPPKMITGTAEAGQEPPW*SMEEER Trigger: CCTCTCCTCCTCCATGGATCACCAAGGGGGCTCTTG...GCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATGGGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCACCCATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCTGTTTCCCAAAGGCATaGAGACTTGGCTTGTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: STHWLLPPKMITGTAEAGCFPKA*RLGLCP Trigger: AGGGCACAAGCCAAGTCTTCATGCCTTTGGGAAACA...GCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATGGGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGCTGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGACAAGAGCCCCCTTGGTaGTCCATGGAGGAGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QGWKSGKQWYEEPVIDTRQEPPW*SMEEER Trigger: CCTCTCCTCCTCCATGGATCACCAAGGGGGCTCTTG...TCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCAGCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CAA 90 bp | GAGGGCATCAGATCCCATTACAGATGGTTGGGAACCACCATGTGGTaGCTGGGAATTGAACTCAGGACCTGTGGAAGAGCAGTCAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: EGIRSHYRWLGTTMW*LGIELRTCGRAVRA Trigger: AGCCCTGACTGCTCTTCCACAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTTCCCAACCATCTGTAATGGGATCTGATGCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGGCCCAAACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAATGTTTCCCAAAGGCATaGAGACTTGGCTTGTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GRPKHKDPGESGKAGSQECFPKA*RLGLCP Trigger: AGGGCACAAGCCAAGTCTTCATGCCTTTGGGAAACA...TTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTTTGGGCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGACAAGAGCCCCCTTGGTaGTCCATGGAGGAGGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CCVHAHTLYAFRCPQRRRQEPPW*SMEEER Trigger: CCTCTCCTCCTCCATGGATCACCAAGGGGGCTCTTG...TCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGTCATAGACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAAATGGAGGAGGAGAGGTaGCCTCATCCTAGCTCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: PVIDTRVGRPTDVSQRHEMEEER*PHPSSK Trigger: TTTAGAGCTAGGATGAGGGCACCTCTCCTCCTCCAT...TTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTCTATGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGACATGAGACAGTCTCCTaGGGCCAGCACAAACCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: CCVHAHTLYAFRCPQRRRHETVS*GQHKPS Trigger: GGAAGGTTTGTGCTGGCCTCAGGAGACTGTCTCATG...TCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGCCTAAAGGGAGACACCATCAAGGCTTAGAAGAGCTTGAAGCGCCTCTTCTCAGGAAAACAGTGGTATaGGGAGCCAGTCATAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: LPKGRHHQGLEELEAPLLRKTVV*GASHRH Trigger: GTGTCTATGACTGGCTCCTCATACCACTGTTTTCCT...GAGAAGAGGCGCTTCAAGCTCTTCTAAGCCTTGATGGTGTCTCCCTTTAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGCCTAAAGGGAGACACCATCAAGGCTTAGAAGAGCTTGAAGCGCCTCTTCTCGAACCACCATGTGGTTaGTGGGAATTGAACTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LPKGRHHQGLEELEAPLLEPPCG*WELNSG Trigger: TCCTGAGTTCAATTCCCAGCAACCACATGGTGGTTC...GAGAAGAGGCGCTTCAAGCTCTTCTAAGCCTTGATGGTGTCTCCCTTTAGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGAAGCCAGGGACTTAGCGTAGACAAAAAGTTCCCTTTCCCCAGCCTGCAGAAGTCAGGAAAACAGTaGTATGAGGAGCCAGTCATA | + |
|
Preference number: 2 (lower is better) Translates to: RGSQGLSVDKKFPFPSLQKSGKQ*YEEPVI Trigger: TATGACTGGCTCCTCATACCACTGTTTTCCTGACTT...CTGCAGGCTGGGGAAAGGGAACTTTTTGTCTACGCTAAGTCCCTGGCTTCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGAAGCCAGGGACTTAGCGTAGACAAAAAGTTCCCTTTCCCCAGCCTGCAGGATGTAGACAGCACATaGCATCTGAACATACATAAG | + |
|
Preference number: 2 (lower is better) Translates to: RGSQGLSVDKKFPFPSLQDVDST*HLNIHK Trigger: CTTATGTATGTTCAGATGTCATGTGCTGTCTACATC...CTGCAGGCTGGGGAAAGGGAACTTTTTGTCTACGCTAAGTCCCTGGCTTCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGAAATGTGGCTGGTTCCTaGAACTGGAGTGACGGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: CCVHAHTLYAFRCPQRRRNVAGS*NWSDGK Trigger: CTTACCGTCACTCCAGTTTCAGGAACCAGCCACATT...TCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCCTAAAGGGAGACACCATCAAGGCTTAGAAGAGCTTGAAGCGCCTCTTCTCTACACACCAGAAATGTaGCTGGTTCCTGAAACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LPKGRHHQGLEELEAPLLYTPEM*LVPETG Trigger: TCCAGTTTCAGGAACCAGCCACATTTCTGGTGTGTA...GAGAAGAGGCGCTTCAAGCTCTTCTAAGCCTTGATGGTGTCTCCCTTTAGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGAGAACCACCATGTGGTTaGTGGGAATTGAACTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: CCVHAHTLYAFRCPQRRREPPCG*WELNSG Trigger: TCCTGAGTTCAATTCCCAGCAACCACATGGTGGTTC...TCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCAATGGAGGAGGAGAGGTaGCCTCATCCTAGCTCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: LCVIQPSATTPEHYKLGAMEEER*PHPSSK Trigger: TTTAGAGCTAGGATGAGGGCACCTCTCCTCCTCCAT...TGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR GCA 90 bp | CGGCCTGGACACTTTCAACACAAGAGCTCGTGTATTAAACTGACAACTTCTGTCTGCACACACACTATATaGATTCAGATGCCCTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: RPGHFQHKSSCIKLTTSVCTHTI*IQMPSE Trigger: CTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCA...GACAGAAGTTGTCAGTTTAATACACGAGCTCTTGTGTTGAAAGTGTCCAGGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGACGGTAAGGCACCATTTACTGAGAAGGTTCACTGAGAGGCGCAATGCAAGAACAGCACATGACATCTaGACATACATAAGAATGAAC | + |
|
Preference number: 2 (lower is better) Translates to: VTVRHHLLRRFTERRNARTAHDI*TYIRMN Trigger: GTTCATTCTTATGTATGTTCAGATGTCATGTGCTGT...TCTTGCATTGCGCCTCTCAGTGAACCTTCTCAGTAAATGGTGCCTTACCGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGGATGTAGACAGCACATaGCATCTGAACATACATAAG | + |
|
Preference number: 2 (lower is better) Translates to: VLCSCTHTICIQMPSEEKDVDST*HLNIHK Trigger: CTTATGTATGTTCAGATGTCATGTGCTGTCTACATC...CTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | CGGCCTGGACACTTTCAACACAAGAGCTCGTGTATTAAACTGACAACTTCTGTCCACACTCACTGGAAATaGACAGTGCAAGATCTTATG | + |
|
Preference number: 2 (lower is better) Translates to: RPGHFQHKSSCIKLTTSVHTHWK*TVQDLM Trigger: CATAAGATCTTGCACTGTTCATTTCCAGTGAGTGTG...GACAGAAGTTGTCAGTTTAATACACGAGCTCTTGTGTTGAAAGTGTCCAGGCCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGACTAAATCACATCTTTTaGCCTTCTGCAAGAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: CCVHAHTLYAFRCPQRRRLNHIF*PSARAA Trigger: TGCTGCTCTTGCAGAAGGCCAAAAGATGTGATTTAG...TCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGACTTCAAATAACAACATaGCACAGATGTGACAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: CCVHAHTLYAFRCPQRRRLQITT*HRCDRD Trigger: ATCCCTGTCACATCTGTGTCATGTTGTTATTTGAAG...TCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCCAGTGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGACTGGAAATGAACAGTaGAAGATCTTATGTGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: CPVLCSCTHTICIQMPSETGNEQ*KILCAN Trigger: ATTTGCACATAAGATCTTGCACTGTTCATTTCCAGT...CTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCACTGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | GGCACAGTCCAGCCGGCCACAACACTTCCCTGCTCATaGGACAGTCTCCTGAGGCCAGCACAAACCTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GTVQPATTLPCS*DSLLRPAQTFP Trigger: AGGGAAGGTTTGTGCTGGCCTCAGGAGACTGTCTCATGAGCAGGGAAGTGTTGTGGCCGGCTGGACTGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | CGGCCACAACACTTCCCTGCTCATGAGACAGTCTCCTaGGGCCAGCACAAACCTTCCCTAGAGGCCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RPQHFPAHETVS*GQHKPSLEAKT Trigger: TGTCTTGGCCTCTAGGGAAGGTTTGTGCTGGCCTCAGGAGACTGTCTCATGAGCAGGGAAGTGTTGTGGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | AGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTATaGGGAGCCAGTCATAGACACCAGAGTGGGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SQARLEVRKTVV*GASHRHQSGEA Trigger: GGCCTCCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | CAGATGGTTGGGAACCACCATGTGGTTGCTGGGAATTaGACTCAGGACCTGTGGAAGAGCAGTCAGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMVGNHHVVAGN*TQDLWKSSQGS Trigger: AGAGCCCTGACTGCTCTTCCACAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTTCCCAACCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | CATCTTTTGGCCTTCTGCAAGAGCAGCAAGTGCCTTTaGGCACCAAGCCACTTCTCCAGCCCCCACCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: HLLAFCKSSKCL*APSHFSSPHLV Trigger: TACAAGGTGGGGGCTGGAGAAGTGGCTTGGTGCTCAAAGGCACTTGCTGCTCTTGCAGAAGGCCAAAAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | ATAAGGCAATATTGCTCAATGCAAGAGCCCCCTTGGTaGTCCATGGAGGAGGAGAGGTGCCCTCATCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: IRQYCSMQEPPW*SMEEERCPHPS Trigger: GCTAGGATGAGGGCACCTCTCCTCCTCCATGGATCACCAAGGGGGCTCTTGCATTGAGCAATATTGCCTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR GCA 72 bp | GATCCCATTACAGATGGTTGGGAACCACCATGTGGTTaGTGGGAATTGAACTCAGGACCTGTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DPITDGWEPPCG*WELNSGPVEEQ Trigger: CTGCTCTTCCACAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTTCCCAACCATCTGTAATGGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CCA 72 bp | AATATTGCTCAATGCAAGAGCCCCCTTGGTGATCCATaGAGGAGGAGAGGTGCCCTCATCCTAGCTCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NIAQCKSPLGDP*RRRGALILALK Trigger: CTTTAGAGCTAGGATGAGGGCACCTCTCCTCCTCCATGGATCACCAAGGGGGCTCTTGCATTGAGCAATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CCA 72 bp | GCTATCAGCCACCCTCTCATATACACACCAGAAATGTaGCTGGTTCCTGAAACTGGAGTGACGGTAAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AISHPLIYTPEM*LVPETGVTVRH Trigger: GTGCCTTACCGTCACTCCAGTTTCAGGAACCAGCCACATTTCTGGTGTGTATATGAGAGGGTGGCTGATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | CAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATaGAGACTTGGCTTGTGCCCTAAAGTAAATAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QSGEADRCFPKA*RLGLCPKVNKA Trigger: TGCCTTATTTACTTTAGGGCACAAGCCAAGTCTTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CCA 72 bp | AGTGATGAGGACACATTCCCAGGACCAGGTGTGATATaGGCTGCAGTTGACTTCCATGCTATACAGAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: SDEDTFPGPGVI*AAVDFHAIQNL Trigger: GAGGTTCTGTATAGCATGGAAGTCAACTGCAGCCCATATCACACCTGGTCCTGGGAATGTGTCCTCATCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGACACAGATGTGACAGGGATCCCAGACACTTCTGGGTACTTCTGTAATCTCCTAAGCGGTAGCCTTTaGAAGGGGTCCACTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HDTDVTGIPDTSGYFCNLLSGSL*KGSTCV Trigger: AACACAAGTGGACCCCTTCAAAAGGCTACCGCTTAG...GAGATTACAGAAGTACCCAGAAGTGTCTGGGATCCCTGTCACATCTGTGTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | CCCTCTCATATACACACCAGAAATGTGGCTGGTTCCTaGAACTGGAGTGACGGTAAGGCACCATTTACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PSHIHTRNVAGS*NWSDGKAPFTE Trigger: CTCAGTAAATGGTGCCTTACCGTCACTCCAGTTTCAGGAACCAGCCACATTTCTGGTGTGTATATGAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR GCA 72 bp | GTGTACACCAGAGTGTACTGTCCAGTGCTGTGTTCATaGACACACACTATATGCATTCAGATGCCCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VYTRVYCPVLCS*THTICIQMPSE Trigger: CTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCACTGGACAGTACACTCTGGTGTACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR GCA 72 bp | TGTGCGCAAGTGTGTACACCAGAGTGTACTGTCCAGTaGTGTGTTCATGCACACACACTATATGCATTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: CAQVCTPECTVQ*CVHAHTLYAFR Trigger: TCTGAATGCATATAGTGTGTGTGCATGAACACAGCACTGGACAGTACACTCTGGTGTACACACTTGCGCACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGAGTGAGTACACTACTGTaGTCTTCAGACACACCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: CCVHAHTLYAFRCPQRRRVSTLL*SSDTPE Trigger: TTCTGGTGTGTCTGAAGACAACAGTAGTGTACTCAC...TCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR GCA 72 bp | TGCTGTGTTCATGCACACACACTATATGCATTCAGATaGCCTCAGAGGAGAAGAACATCAGATTCTCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CCVHAHTLYAFR*PQRRRTSDSLG Trigger: ACCCAGAGAATCTGATGTTCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | AAGTCTGATGCTTCAAATAACAACATGACACAGATGTaGCAGGGATCCCAGACACTTCTGGGTACTTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KSDASNNNMTQM*QGSQTLLGTSV Trigger: TACAGAAGTACCCAGAAGTGTCTGGGATCCCTGTCACATCTGTGTCATGTTGTTATTTGAAGCATCAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | CACAAACAGGGTCGGGAGAGACCATCTATATTTTTCTaGGCTTCAATTAGCAAGACCAACCGATTAAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: HKQGRERPSIFF*ASISKTNRLRG Trigger: TCCTCTTAATCGGTTGGTCTTGCTAATTGAAGCTCAGAAAAATATAGATGGTCTCTCCCGACCCTGTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR TCA 72 bp | CACTTGTGTTTAGTCTGCAAACACACTCACTGGAAATaGACAGTGCAAGATCTTATGTGCAAATATTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HLCLVCKHTHWK*TVQDLMCKYLQ Trigger: TTGCAAATATTTGCACATAAGATCTTGCACTGTTCATTTCCAGTGAGTGTGTTTGCAGACTAAACACAAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR GCA 72 bp | CTTTTTGTGTATCTAAGATGTGTGTGTGTGCACACATaGAGACATTTCTCTTTCGTTATTATCTCTAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LFVYLRCVCVHT*RHFSFVIISRM Trigger: CATCCTAGAGATAATAACGAAAGAGAAATGTCTGCATGTGTGCACACACACACATCTTAGATACACAAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TCCACCCATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCGCCTGCCGGGCAGCCTaGAAGCGGGGCAGCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STHWLLPPKMITGTAEAGACRAA*KRGSSL Trigger: CAGCGAGCTGCCCCGCTTCCAGGCTGCCCGGCAGGC...GCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATGGGTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | AACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTAGCCTGCCGGGCAGCCTaGAAGCGGGGCAGCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NIRIPVSQARLEVRKTVVACRAA*KRGSSL Trigger: CAGCGAGCTGCCCCGCTTCCAGGCTGCCCGGCAGGC...TACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | GACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAAGACTTGGCTGGCCGGACCCTGGAATaGCTCCTGGCCAGTGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DTRVGRPTDVSQRHEDLAGRTLE*LLASEY Trigger: GTACTCACTGGCCAGGAGGCATTCCAGGGTCCGGCC...AGCCAAGTCTTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCCCAAACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAACTCCTCCCCCAACCCTaGGTGCATCATGGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRPKHKDPGESGKAGSQELLPQP*VHHGGH Trigger: ATGGCCACCATGATGCACTCAGGGTTGGGGGAGGAG...TTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTTTGGGCCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | CATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCACGTTTCTCCTCCCCCAACCCTaGGTGCATCATGGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HWLLPPKMITGTAEAGTFLLPQP*VHHGGH Trigger: ATGGCCACCATGATGCACTCAGGGTTGGGGGAGGAG...AAACGTGCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | GACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAAGACTTGGCTTCCCCCAACCCTGAGTaGATCATGGTGGCCATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DTRVGRPTDVSQRHEDLASPNPE*IMVAIA Trigger: GGCGATGGCCACCATGATGCACTCAGGGTTGGGGGA...AGCCAAGTCTTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TCCACCCATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCTCTTGTGGAATTCAATaGGCAGGAGGGGAGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STHWLLPPKMITGTAEAGSCGIQ*AGGERG Trigger: GCCTCGCTCCCCTCCTGCCCATTGAATTCCACAAGA...GCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATGGGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | CATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCACGTTTTCAGGACAGTCACCTTaGGCCGGACCCTGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: HWLLPPKMITGTAEAGTFSGQSP*AGPWNA Trigger: GGCATTCCAGGGTCCGGCCCAAGGTGACTGTCCTGA...AAACGTGCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTCATAGACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAAGGGCCTGTGGGCTCGTaGACACTCTGCAGAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVIDTRVGRPTDVSQRHEGPVGS*TLCRMS Trigger: GCTCATTCTGCAGAGTGTTCACGAGCCCACAGGCCC...TTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTCTATGACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | ATAACGGGAACCGCAGAGGCTGGCACGTTTCAGATGCTTGTGTGTCATCCAACCCAGCAGCTGGATGTCTaGGTGGGCGTTGGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITGTAEAGTFQMLVCHPTQQLDV*VGVGHC Trigger: ACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTG...GGTTGGATGACACACAAGCATCTGAAACGTGCCAGCCTCTGCGGTTCCCGTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGGAGGAGGAGAGGTGCCCTCATCCTAGCTCTAAAGTAGGAACGGGTTCCAGCACAGTTCAGCTCTaGGTCCTCCTGGCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SMEEERCPHPSSKVGTGSSTVQL*VLLAAT Trigger: AGTGGCAGCCAGGAGGACTCAGAGCTGAACTGTGCT...GGAACCCGTTCCTACTTTAGAGCTAGGATGAGGGCACCTCTCCTCCTCCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGGAGGAGGAGAGGTGCCCTCATCCTAGCTCTAAAGTAGGAACGGGTTCCTGTGCCGCCGGACACTaGCACACTTCTCCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SMEEERCPHPSSKVGTGSCAAGH*HTSPGM Trigger: CATACCTGGAGAAGTGTGGCAGTGTCCGGCGGCACA...GGAACCCGTTCCTACTTTAGAGCTAGGATGAGGGCACCTCTCCTCCTCCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | ATAACGGGAACCGCAGAGGCTGGCACGTTTCAGATGCTTGTGTGTCATCCAACCTCCCCCAACCCTGAGTaGATCATGGTGGCCATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ITGTAEAGTFQMLVCHPTSPNPE*IMVAIA Trigger: GGCGATGGCCACCATGATGCACTCAGGGTTGGGGGA...GGTTGGATGACACACAAGCATCTGAAACGTGCCAGCCTCTGCGGTTCCCGTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | ATAACGGGAACCGCAGAGGCTGGCACGTTTCAGATGCTTGTGTGTCATCCAACCCCCAGCAGGGAGATCTaGCGGATGGTCAGCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ITGTAEAGTFQMLVCHPTPSREI*RMVSSC Trigger: ACAGGAGCTGACCATCCGCCAGATCTCCCTGCTGGG...GGTTGGATGACACACAAGCATCTGAAACGTGCCAGCCTCTGCGGTTCCCGTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | CATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCACGTTTCCTCACTTGGGCCTGTaGGCTCGTGAACACTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HWLLPPKMITGTAEAGTFPHLGL*AREHSA Trigger: TGCAGAGTGTTCACGAGCCCACAGGCCCAAGTGAGG...AAACGTGCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCCCAAACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAACAAGTAGCCCTCACTTaGGCCTGTGGGCTCGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRPKHKDPGESGKAGSQEQVALT*ACGLVN Trigger: GTTCACGAGCCCACAGGCCCAAGTGAGGGCTACTTG...TTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTTTGGGCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAAGACTTGGCTGTGGCCGGCCAACCGTaGTCATCAGAGAGGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: DTRVGRPTDVSQRHEDLAVAGQP*SSERHS Trigger: ACTATGCCTCTCTGATGACCACGGTTGGCCGGCCAC...AGCCAAGTCTTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGGAGGAGGAGAGGTGCCCTCATCCTAGCTCTAAAGTAGGAACGGGTTCCCTGAGTGCATCATGGTaGCCATCGCCAGCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SMEEERCPHPSSKVGTGSLSASW*PSPAAG Trigger: TCCAGCTGCTGGCGATGGCCACCATGATGCACTCAG...GGAACCCGTTCCTACTTTAGAGCTAGGATGAGGGCACCTCTCCTCCTCCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | GGGAACCGCAGAGGCTGGCACGTTTCAGATGCTTGTGTGTCATCCAACCTTCTGGTGCATACAGCTCATTaGTCTGCAAGCCGCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNRRGWHVSDACVSSNLLVHTAH*SASRPL Trigger: AAGGGGGCGGCTTGCAGAGCAATGAGCTGTATGCAC...CAGAAGGTTGGATGACACACAAGCATCTGAAACGTGCCAGCCTCTGCGGTTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | CATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCACGTTTGTGCATACAGCTCATTaGTCTGCAAGCCGCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HWLLPPKMITGTAEAGTFVHTAH*SASRPL Trigger: AAGGGGGCGGCTTGCAGAGCAATGAGCTGTATGCAC...AAACGTGCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCTAAAGGGAGACACCATCAAGGCTTAGAAGAGCTTGAAGCGCCTCTTCTCGGCCGGACCCTGGAATaGCTCCTGGCCAGTGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPKGRHHQGLEELEAPLLGRTLE*LLASEY Trigger: GTACTCACTGGCCAGGAGGCATTCCAGGGTCCGGCC...GAGAAGAGGCGCTTCAAGCTCTTCTAAGCCTTGATGGTGTCTCCCTTTAGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAGTGGGGCCCAGCAGGGAGATCTaGCGGATGGTCAGCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WKSGKQWYEEPVIDTRVGPSREI*RMVSSC Trigger: ACAGGAGCTGACCATCCGCCAGATCTCCCTGCTGGG...CCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCATAGACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAACAAGTAGCCCTCACTTaGGCCTGTGGGCTCGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVIDTRVGRPTDVSQRHEQVALT*ACGLVN Trigger: GTTCACGAGCCCACAGGCCCAAGTGAGGGCTACTTG...TTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTCTATGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAGCCAGGGACTTAGCGTAGACAAAAAGTTCCCTTTCCCCAGCCTGCAGAGCTGGATGTCTGAGTaGGCGTTGGCCACTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSQGLSVDKKFPFPSLQSWMSE*ALATVC Trigger: GCACACAGTGGCCAACGCCCACTCAGACATCCAGCT...CTGCAGGCTGGGGAAAGGGAACTTTTTGTCTACGCTAAGTCCCTGGCTTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | ATAACGGGAACCGCAGAGGCTGGCACGTTTCAGATGCTTGTGTGTCATCCAACCACCCTGAGTGCATCATaGTGGCCATCGCCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITGTAEAGTFQMLVCHPTTLSAS*WPSPAA Trigger: AGCTGCTGGCGATGGCCACCATGATGCACTCAGGGT...GGTTGGATGACACACAAGCATCTGAAACGTGCCAGCCTCTGCGGTTCCCGTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | ATAACGGGAACCGCAGAGGCTGGCACGTTTCAGATGCTTGTGTGTCATCCAACCAAGGGAGACACCACTTaGTTCACCAGCTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITGTAEAGTFQMLVCHPTKGDTT*FTSSSS Trigger: GCTGGAGGAGCTGGTGAAGCAAGTGGTGTCTCCCTT...GGTTGGATGACACACAAGCATCTGAAACGTGCCAGCCTCTGCGGTTCCCGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAGTGGGGTGTGCCGCCGGACACTaGCACACTTCTCCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: WKSGKQWYEEPVIDTRVGCAAGH*HTSPGM Trigger: CATACCTGGAGAAGTGTGGCAGTGTCCGGCGGCACA...CCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCTAAAGGGAGACACCATCAAGGCTTAGAAGAGCTTGAAGCGCCTCTTCTCTCCCCCAACCCTGAGTaGATCATGGTGGCCATCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPKGRHHQGLEELEAPLLSPNPE*IMVAIA Trigger: GGCGATGGCCACCATGATGCACTCAGGGTTGGGGGA...GAGAAGAGGCGCTTCAAGCTCTTCTAAGCCTTGATGGTGTCTCCCTTTAGGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GTGACGGTAAGGCACCATTTACTGAGAAGGTTCACTGAGAGGCGCAATGCAAGATCAGGACAGTCACCTTaGGCCGGACCCTGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTVRHHLLRRFTERRNARSGQSP*AGPWNA Trigger: GGCATTCCAGGGTCCGGCCCAAGGTGACTGTCCTGA...TCTTGCATTGCGCCTCTCAGTGAACCTTCTCAGTAAATGGTGCCTTACCGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGCTGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAGCCATCGCCAGCAGCTaGATGTCTGAGTGGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGWKSGKQWYEEPVIDTRAIASS*MSEWAL Trigger: CAACGCCCACTCAGACATCCAGCTGCTGGCGATGGC...TCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCAGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAGTGGGGCTGAGTGCATCATGGTaGCCATCGCCAGCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WKSGKQWYEEPVIDTRVGLSASW*PSPAAG Trigger: TCCAGCTGCTGGCGATGGCCACCATGATGCACTCAG...CCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | CATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTATGAGCTCTGAGTCCTCCTaGCTGCCACTTGCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKDPGESGKAGSQENSGMSSESS*LPLATS Trigger: AGACGTGGCAAGTGGCAGCCAGGAGGACTCAGAGCT...CATACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | TCCATGGAGGAGGAGAGGTGCCCTCATCCTAGCTCTAAAGTAGGAACGGGTTCCCACCTTCACACAGCTTaGTCTTCTCCTCCACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMEEERCPHPSSKVGTGSHLHTA*SSPPQR Trigger: CCTTTGTGGAGGAGAAGATCAAGCTGTGTGAAGGTG...GGAACCCGTTCCTACTTTAGAGCTAGGATGAGGGCACCTCTCCTCCTCCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | TTGCCTAAAGGGAGACACCATCAAGGCTTAGAAGAGCTTGAAGCGCCTCTTCTCAGCACAGTTCAGCTCTaGGTCCTCCTGGCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LPKGRHHQGLEELEAPLLSTVQL*VLLAAT Trigger: AGTGGCAGCCAGGAGGACTCAGAGCTGAACTGTGCT...GAGAAGAGGCGCTTCAAGCTCTTCTAAGCCTTGATGGTGTCTCCCTTTAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | GGGAACCGCAGAGGCTGGCACGTTTCAGATGCTTGTGTGTCATCCAACCTTCTGTACAGCTCATTGCTCTaGAAGCCGCCCCCTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GNRRGWHVSDACVSSNLLYSSLL*KPPPLK Trigger: TTTCAAAGGGGGCGGCTTGCAGAGCAATGAGCTGTA...CAGAAGGTTGGATGACACACAAGCATCTGAAACGTGCCAGCCTCTGCGGTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTGTGCCCTAAAGTAAATAAGGCAATATTGCTCAATGCAAGAGCCCCCTTGGGCCGGACCCTGGAATaGCTCCTGGCCAGTGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLCPKVNKAILLNARAPLGRTLE*LLASEY Trigger: GTACTCACTGGCCAGGAGGCATTCCAGGGTCCGGCC...CAAGGGGGCTCTTGCATTGAGCAATATTGCCTTATTTACTTTAGGGCACAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | CATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCACGTTTACACTTCTCCAGGTATaGCTCCCCTTCCTGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HWLLPPKMITGTAEAGTFTLLQV*LPFLFC Trigger: ACAGAACAGGAAGGGGAGGCATACCTGGAGAAGTGT...AAACGTGCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAGTGGGGTCTTGTGGAATTCAATaGGCAGGAGGGGAGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WKSGKQWYEEPVIDTRVGSCGIQ*AGGERG Trigger: GCCTCGCTCCCCTCCTGCCCATTGAATTCCACAAGA...CCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCCCAAACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAATGTTCCAGGCAGAGTTaGAACTTAGCTGCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRPKHKDPGESGKAGSQECSRQS*NLAAEP Trigger: AGGCTCTGCAGCTAAGTTCCAACTCTGCCTGGAACA...TTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTTTGGGCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCATAGACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAAGTCTCGGTGAAGAAGTaGTCCCAGACTTCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVIDTRVGRPTDVSQRHEVSVKK*SQTSAR Trigger: TCTGGCTGAAGTCTGGGACCACTTCTTCACCGAGAC...TTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTCTATGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | AACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTACCTCACTTGGGCCTGTaGGCTCGTGAACACTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NIRIPVSQARLEVRKTVVPHLGL*AREHSA Trigger: TGCAGAGTGTTCACGAGCCCACAGGCCCAAGTGAGG...TACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GTGACGGTAAGGCACCATTTACTGAGAAGGTTCACTGAGAGGCGCAATGCAAGACCTCACTTGGGCCTGTaGGCTCGTGAACACTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTVRHHLLRRFTERRNARPHLGL*AREHSA Trigger: TGCAGAGTGTTCACGAGCCCACAGGCCCAAGTGAGG...TCTTGCATTGCGCCTCTCAGTGAACCTTCTCAGTAAATGGTGCCTTACCGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GTGACGGTAAGGCACCATTTACTGAGAAGGTTCACTGAGAGGCGCAATGCAAGACAAGTAGCCCTCACTTaGGCCTGTGGGCTCGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTVRHHLLRRFTERRNARQVALT*ACGLVN Trigger: GTTCACGAGCCCACAGGCCCAAGTGAGGGCTACTTG...TCTTGCATTGCGCCTCTCAGTGAACCTTCTCAGTAAATGGTGCCTTACCGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGTCAGGACAGTCACCTTaGGCCGGACCCTGGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLCSCTHTICIQMPSEEKSGQSP*AGPWNA Trigger: GGCATTCCAGGGTCCGGCCCAAGGTGACTGTCCTGA...CTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GTGACGGTAAGGCACCATTTACTGAGAAGGTTCACTGAGAGGCGCAATGCAAGACTGAGTGCATCATGGTaGCCATCGCCAGCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTVRHHLLRRFTERRNARLSASW*PSPAAG Trigger: TCCAGCTGCTGGCGATGGCCACCATGATGCACTCAG...TCTTGCATTGCGCCTCTCAGTGAACCTTCTCAGTAAATGGTGCCTTACCGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTGTGCCCTAAAGTAAATAAGGCAATATTGCTCAATGCAAGAGCCCCCTTGGGGCCTGTGGGCTCGTaGACACTCTGCAGAATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLCPKVNKAILLNARAPLGPVGS*TLCRMS Trigger: GCTCATTCTGCAGAGTGTTCACGAGCCCACAGGCCC...CAAGGGGGCTCTTGCATTGAGCAATATTGCCTTATTTACTTTAGGGCACAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | CGGCCTGGACACTTTCAACACAAGAGCTCGTGTATTAAACTGACAACTTCTGTCCTCCTCCCCCAACCCTaGGTGCATCATGGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPGHFQHKSSCIKLTTSVLLPQP*VHHGGH Trigger: ATGGCCACCATGATGCACTCAGGGTTGGGGGAGGAG...GACAGAAGTTGTCAGTTTAATACACGAGCTCTTGTGTTGAAAGTGTCCAGGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTCATAGACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAATTGATCACAGCTGTCTaGACACTGTTCCAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVIDTRVGRPTDVSQRHELITAV*TLFQAE Trigger: CTCTGCCTGGAACAGTGTGCAGACAGCTGTGATCAA...TTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTCTATGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | ATAACGGGAACCGCAGAGGCTGGCACGTTTCAGATGCTTGTGTGTCATCCAACCTTGATCACAGCTGTCTaGACACTGTTCCAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITGTAEAGTFQMLVCHPTLITAV*TLFQAE Trigger: CTCTGCCTGGAACAGTGTGCAGACAGCTGTGATCAA...GGTTGGATGACACACAAGCATCTGAAACGTGCCAGCCTCTGCGGTTCCCGTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | TTGCCTAAAGGGAGACACCATCAAGGCTTAGAAGAGCTTGAAGCGCCTCTTCTCGTGCATACAGCTCATTaGTCTGCAAGCCGCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPKGRHHQGLEELEAPLLVHTAH*SASRPL Trigger: AAGGGGGCGGCTTGCAGAGCAATGAGCTGTATGCAC...GAGAAGAGGCGCTTCAAGCTCTTCTAAGCCTTGATGGTGTCTCCCTTTAGGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCTGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAAAGGGAGACACCACTTaGTTCACCAGCTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGWKSGKQWYEEPVIDTRKGDTT*FTSSSS Trigger: GCTGGAGGAGCTGGTGAAGCAAGTGGTGTCTCCCTT...TCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCAGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | AACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTACTGAGTCCTCCTGGCTaGCACTTGCCACGTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: NIRIPVSQARLEVRKTVVLSPPG*HLPRLL Trigger: TAGAAGACGTGGCAAGTGGCAGCCAGGAGGACTCAG...TACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGCTGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGACTGAGTCCTCCTGGCTaGCACTTGCCACGTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QGWKSGKQWYEEPVIDTRLSPPG*HLPRLL Trigger: TAGAAGACGTGGCAAGTGGCAGCCAGGAGGACTCAG...TCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCAGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAGTGGGGGTCTCGGTGAAGAAGTaGTCCCAGACTTCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKSGKQWYEEPVIDTRVGVSVKK*SQTSAR Trigger: TCTGGCTGAAGTCTGGGACCACTTCTTCACCGAGAC...CCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCATCACCTTGGGCCGGACCCTaGAATGCCTCCTGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CVIQPSATTPEHYKLGASPWAGP*NASWPV Trigger: CACTGGCCAGGAGGCATTCCAGGGTCCGGCCCAAGG...TGATGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | CATGACACAGATGTGACAGGGATCCCAGACACTTCTGGGTACTTCTGTAATCTCAGCTCTGAGTCCTCCTaGCTGCCACTTGCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HDTDVTGIPDTSGYFCNLSSESS*LPLATS Trigger: AGACGTGGCAAGTGGCAGCCAGGAGGACTCAGAGCT...GAGATTACAGAAGTACCCAGAAGTGTCTGGGATCCCTGTCACATCTGTGTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | TGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAGTGGGGCACCTTCACACAGCTTaGTCTTCTCCTCCACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WKSGKQWYEEPVIDTRVGHLHTA*SSPPQR Trigger: CCTTTGTGGAGGAGAAGATCAAGCTGTGTGAAGGTG...CCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | CATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTATGTTGATCACAGCTGTCTaGACACTGTTCCAGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HKDPGESGKAGSQENSGMLITAV*TLFQAE Trigger: CTCTGCCTGGAACAGTGTGCAGACAGCTGTGATCAA...CATACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGGAGGAGGAGAGGTGCCCTCATCCTAGCTCTAAAGTAGGAACGGGTTCCAACCGGATAAAATATTaGCTGCAGGGTAGGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SMEEERCPHPSSKVGTGSNRIKY*LQGRES Trigger: ACTCTCCCTACCCTGCAGGCAATATTTTATCCGGTT...GGAACCCGTTCCTACTTTAGAGCTAGGATGAGGGCACCTCTCCTCCTCCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGAAGGGAGACACCACTTaGTTCACCAGCTCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLCSCTHTICIQMPSEEKKGDTT*FTSSSS Trigger: GCTGGAGGAGCTGGTGAAGCAAGTGGTGTCTCCCTT...CTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCAGTGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGCTGAGTCCTCCTGGCTaGCACTTGCCACGTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CPVLCSCTHTICIQMPSELSPPG*HLPRLL Trigger: TAGAAGACGTGGCAAGTGGCAGCCAGGAGGACTCAG...CTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCACTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGAGTGGCCGGCCAACCGTaGTCATCAGAGAGGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: CCVHAHTLYAFRCPQRRRVAGQP*SSERHS Trigger: ACTATGCCTCTCTGATGACCACGGTTGGCCGGCCAC...TCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTGTGCCCTAAAGTAAATAAGGCAATATTGCTCAATGCAAGAGCCCCCTTGGTGGCCGGCCAACCGTaGTCATCAGAGAGGCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLCPKVNKAILLNARAPLVAGQP*SSERHS Trigger: ACTATGCCTCTCTGATGACCACGGTTGGCCGGCCAC...CAAGGGGGCTCTTGCATTGAGCAATATTGCCTTATTTACTTTAGGGCACAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGAAGCTGGATGTCTGAGTaGGCGTTGGCCACTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CCVHAHTLYAFRCPQRRRSWMSE*ALATVC Trigger: GCACACAGTGGCCAACGCCCACTCAGACATCCAGCT...TCTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CAA 72 bp | GTAAATAAGGCAATATTGCTCAATGCAAGAGCCCCCTaGGTGATCCATGGAGGAGGAGAGGTGCCCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VNKAILLNARAP*VIHGGGEVPSS Trigger: GGATGAGGGCACCTCTCCTCCTCCATGGATCACCAAGGGGGCTCTTGCATTGAGCAATATTGCCTTATTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | AACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTACACCTTCACACAGCTTaGTCTTCTCCTCCACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NIRIPVSQARLEVRKTVVHLHTA*SSPPQR Trigger: CCTTTGTGGAGGAGAAGATCAAGCTGTGTGAAGGTG...TACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCACAGCAGCTGGATGTCTaGGTGGGCGTTGGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCVIQPSATTPEHYKLGAQQLDV*VGVGHC Trigger: ACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTG...TGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | GTGACGGTAAGGCACCATTTACTGAGAAGGTTCACTGAGAGGCGCAATGCAAGATACAGCTCATTGCTCTaGAAGCCGCCCCCTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTVRHHLLRRFTERRNARYSSLL*KPPPLK Trigger: TTTCAAAGGGGGCGGCTTGCAGAGCAATGAGCTGTA...TCTTGCATTGCGCCTCTCAGTGAACCTTCTCAGTAAATGGTGCCTTACCGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | AACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTAACACTTCTCCAGGTATaGCTCCCCTTCCTGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NIRIPVSQARLEVRKTVVTLLQV*LPFLFC Trigger: ACAGAACAGGAAGGGGAGGCATACCTGGAGAAGTGT...TACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GTGACGGTAAGGCACCATTTACTGAGAAGGTTCACTGAGAGGCGCAATGCAAGATGTTCCAGGCAGAGTTaGAACTTAGCTGCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTVRHHLLRRFTERRNARCSRQS*NLAAEP Trigger: AGGCTCTGCAGCTAAGTTCCAACTCTGCCTGGAACA...TCTTGCATTGCGCCTCTCAGTGAACCTTCTCAGTAAATGGTGCCTTACCGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | CATGACACAGATGTGACAGGGATCCCAGACACTTCTGGGTACTTCTGTAATCTCGTCTCGGTGAAGAAGTaGTCCCAGACTTCAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HDTDVTGIPDTSGYFCNLVSVKK*SQTSAR Trigger: TCTGGCTGAAGTCTGGGACCACTTCTTCACCGAGAC...GAGATTACAGAAGTACCCAGAAGTGTCTGGGATCCCTGTCACATCTGTGTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCACCCAGCAGGGAGATCTaGCGGATGGTCAGCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCVIQPSATTPEHYKLGAPSREI*RMVSSC Trigger: ACAGGAGCTGACCATCCGCCAGATCTCCCTGCTGGG...TGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CAA 72 bp | AGATCCCATTACAGATGGTTGGGAACCACCATGTGGTaGCTGGGAATTGAACTCAGGACCTGTGGAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSHYRWLGTTMW*LGIELRTCGRA Trigger: TGCTCTTCCACAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGTTCCCAACCATCTGTAATGGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CAA 72 bp | ACACCAGAAGAGGGCATCAGATCCCATTACAGATGGTaGGGAACCACCATGTGGTTGCTGGGAATTGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: TPEEGIRSHYRW*GTTMWLLGIEL Trigger: GAGTTCAATTCCCAGCAACCACATGGTGGTTCCCAACCATCTGTAATGGGATCTGATGCCCTCTTCTGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | CATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTATGAACCGGATAAAATATTaGCTGCAGGGTAGGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HKDPGESGKAGSQENSGMNRIKY*LQGRES Trigger: ACTCTCCCTACCCTGCAGGCAATATTTTATCCGGTT...CATACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCATCATGTGCCGCCGGACACTaGCACACTTCTCCAGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: CVIQPSATTPEHYKLGASCAAGH*HTSPGM Trigger: CATACCTGGAGAAGTGTGGCAGTGTCCGGCGGCACA...TGATGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGTGTTCCAGGCAGAGTTaGAACTTAGCTGCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLCSCTHTICIQMPSEEKCSRQS*NLAAEP Trigger: AGGCTCTGCAGCTAAGTTCCAACTCTGCCTGGAACA...CTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCATCAAGCTGGATGTCTGAGTaGGCGTTGGCCACTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CVIQPSATTPEHYKLGASSWMSE*ALATVC Trigger: GCACACAGTGGCCAACGCCCACTCAGACATCCAGCT...TGATGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCAACCCTGAGTGCATCATaGTGGCCATCGCCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCVIQPSATTPEHYKLGATLSAS*WPSPAA Trigger: AGCTGCTGGCGATGGCCACCATGATGCACTCAGGGT...TGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCATCAAGCTCTGAGTCCTCCTaGCTGCCACTTGCCACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVIQPSATTPEHYKLGASSSESS*LPLATS Trigger: AGACGTGGCAAGTGGCAGCCAGGAGGACTCAGAGCT...TGATGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CAA 72 bp | TTAGTTTGTGAGTTTCTGCAGAGCCCAGAGCTGGGATaGTTCCCTGTCACTCACATTCAGCTTGGCGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVCEFLQSPELG*FPVTHIQLGVQ Trigger: TTGAACGCCAAGCTGAATGTGAGTGACAGGGAACAATCCCAGCTCTGGGCTCTGCAGAAACTCACAAACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTCCTTGACAGAGACATAGAAGATAAGGAAAAAGGCATTTACAAAGCACACCAGCAGCTGGATGTCTaGGTGGGCGTTGGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLDRDIEDKEKGIYKAHQQLDV*VGVGHC Trigger: ACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTG...GTGTGCTTTGTAAATGCCTTTTTCCTTATCTTCTATGTCTCTGTCAAGGACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAGTGGGGAAAGGACAGTCCTTTTaGAAGAAGCTGGTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WKSGKQWYEEPVIDTRVGKGQSF*KKLVLE Trigger: TTCCAGAACCAGCTTCTTGCAAAAGGACTGTCCTTT...CCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCATCATCTTGTGGAATTCAATaGGCAGGAGGGGAGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVIQPSATTPEHYKLGASSCGIQ*AGGERG Trigger: GCCTCGCTCCCCTCCTGCCCATTGAATTCCACAAGA...TGATGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTGGAAATGAACAGTGCAAGATCTTATGTGCAAATATTTGCAAACCTTTTCCTTGGGCCGGACCCTaGAATGCCTCCTGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTGNEQCKILCANICKPFPWAGP*NASWPV Trigger: CACTGGCCAGGAGGCATTCCAGGGTCCGGCCCAAGG...AAAAGGTTTGCAAATATTTGCACATAAGATCTTGCACTGTTCATTTCCAGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCCTTGACAGAGACATAGAAGATAAGGAAAAAGGCATTTACAAAGCACACACCCTGAGTGCATCATaGTGGCCATCGCCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLDRDIEDKEKGIYKAHTLSAS*WPSPAA Trigger: AGCTGCTGGCGATGGCCACCATGATGCACTCAGGGT...GTGTGCTTTGTAAATGCCTTTTTCCTTATCTTCTATGTCTCTGTCAAGGACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGAAAGGACAGTCCTTTTaGAAGAAGCTGGTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLCSCTHTICIQMPSEEKKGQSF*KKLVLE Trigger: TTCCAGAACCAGCTTCTTGCAAAAGGACTGTCCTTT...CTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTGTGCCCTAAAGTAAATAAGGCAATATTGCTCAATGCAAGAGCCCCCTTGAACCGGATAAAATATTaGCTGCAGGGTAGGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLCPKVNKAILLNARAPLNRIKY*LQGRES Trigger: ACTCTCCCTACCCTGCAGGCAATATTTTATCCGGTT...CAAGGGGGCTCTTGCATTGAGCAATATTGCCTTATTTACTTTAGGGCACAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTGGAAATGAACAGTGCAAGATCTTATGTGCAAATATTTGCAAACCTTTTGCCATCGCCAGCAGCTaGATGTCTGAGTGGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTGNEQCKILCANICKPFAIASS*MSEWAL Trigger: CAACGCCCACTCAGACATCCAGCTGCTGGCGATGGC...AAAAGGTTTGCAAATATTTGCACATAAGATCTTGCACTGTTCATTTCCAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CAA 72 bp | AGACTTGGCTTGTGCCCTAAAGTAAATAAGGCAATATaGCTCAATGCAAGAGCCCCCTTGGTGATCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLGLCPKVNKAI*LNARAPLVIHG Trigger: TCCATGGATCACCAAGGGGGCTCTTGCATTGAGCAATATTGCCTTATTTACTTTAGGGCACAAGCCAAGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR TCA 90 bp | CTCACTGGAAATGAACAGTGCAAGATCTTATGTGCAAATATTTGCAAACCTTTTAGCACAGTTCAGCTCTaGGTCCTCCTGGCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LTGNEQCKILCANICKPFSTVQL*VLLAAT Trigger: AGTGGCAGCCAGGAGGACTCAGAGCTGAACTGTGCT...AAAAGGTTTGCAAATATTTGCACATAAGATCTTGCACTGTTCATTTCCAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| 3UTR CAA 72 bp | AGCCATCTCTCCAGCCCCCTGTTGACGCCTTATGTATaGAGATTTCATCAACAAAAATTCCAAAGGCTAACC | + |
|
Preference number: 4 (lower is better) Translates to: SHLSSPLLTPYV*RFHQQKFQRLT Trigger: GGTTAGCCTTTGGAATTTTTGTTGATGAAATCTCAATACATAAGGCGTCAACAGGGGGCTGGAGAGATGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTCCTTGACAGAGACATAGAAGATAAGGAAAAAGGCATTTACAAAGCACACAAAGGACAGTCCTTTTaGAAGAAGCTGGTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVLDRDIEDKEKGIYKAHKGQSF*KKLVLE Trigger: TTCCAGAACCAGCTTCTTGCAAAAGGACTGTCCTTT...GTGTGCTTTGTAAATGCCTTTTTCCTTATCTTCTATGTCTCTGTCAAGGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 90 bp | GGGGCTGTCGAGGATGCTGGGTTCACTGGAGCACTGGCGGTGTGGTaGGGGGAAGCTGGGTGGCAAGAGCAGGTGTTTGTCCTCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GAVEDAGFTGALAVW*GEAGWQEQVFVLAA Trigger: GGCGGCGAGGACAAACACCTGCTCTTGCCACCCAGCTTCCCCCCACCACACCGCCAGTGCTCCAGTGAACCCAGCATCCTCGACAGCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 90 bp | GTCTGCACACTGTTCCAGGCAGAGTTGGAACTTAGCTGCAGAGCCTaGCGGGCAGCCTGGAAGCGGGGCAGCTCGCTGAGCACAGGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCTLFQAELELSCRA*RAAWKRGSSLSTGE Trigger: CTCCCCTGTGCTCAGCGAGCTGCCCCGCTTCCAGGCTGCCCGGCAGGCTCTGCAGCTAAGTTCCAACTCTGCCTGGAACAGTGTGCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043845.14 ENSMUST00000125985.8 ENSMUST00000154525.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 90 bp | GCCATCGCCAGCAGCTGGATGTCTGAGTGGGCGTTGGCCACTGTGTaGCGCCGGACACTGCCACACTTCTCCAGGTATGCCTCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIASSWMSEWALATV*RRTLPHFSRYASPS Trigger: GGAAGGGGAGGCATACCTGGAGAAGTGTGGCAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTGGCGATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 90 bp | TCCTCCCCCAACCCTGAGTGCATCATGGTGGCCATCGCCAGCAGCTaGATGTCTGAGTGGGCGTTGGCCACTGTGTGCCGCCGGACACTG | + |
|
Preference number: 5 (lower is better) Translates to: SSPNPECIMVAIASS*MSEWALATVCRRTL Trigger: CAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTGGCGATGGCCACCATGATGCACTCAGGGTTGGGGGAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 90 bp | CCTGAGTGCATCATGGTGGCCATCGCCAGCAGCTGGATGTCTGAGTaGGCGTTGGCCACTGTGTGCCGCCGGACACTGCCACACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PECIMVAIASSWMSE*ALATVCRRTLPHFS Trigger: GGAGAAGTGTGGCAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTGGCGATGGCCACCATGATGCACTCAGG 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 90 bp | GGCCAACCGTGGTCATCAGAGAGGCATAGTTCAGGACAGTCACCTTaGGCCGGACCCTGGAATGCCTCCTGGCCAGTGAGTACGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQPWSSERHSSGQSP*AGPWNASWPVSTWG Trigger: GCCCCACGTACTCACTGGCCAGGAGGCATTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAACTATGCCTCTCTGATGACCACGGTTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 90 bp | GCATCATGGTGGCCATCGCCAGCAGCTGGATGTCTGAGTGGGCGTTaGCCACTGTGTGCCGCCGGACACTGCCACACTTCTCCAGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: ASWWPSPAAGCLSGR*PLCAAGHCHTSPGM Trigger: CATACCTGGAGAAGTGTGGCAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTGGCGATGGCCACCATGATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 90 bp | CTGGAAGCGGGGCAGCTCGCTGAGCACAGGGGAGCTCATAAAGCGTaGTCTAGGCCGGCGGAAGGAGCCCATCTTGTGGAATTCAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEAGQLAEHRGAHKA*SRPAEGAHLVEFNG Trigger: CCCATTGAATTCCACAAGATGGGCTCCTTCCGCCGGCCTAGACCACGCTTTATGAGCTCCCCTGTGCTCAGCGAGCTGCCCCGCTTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043845.14 ENSMUST00000124802.2 ENSMUST00000125985.8 ENSMUST00000154525.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 90 bp | TCATCAGAGAGGCATAGTTCAGGACAGTCACCTTGGGCCGGACCCTaGAATGCCTCCTGGCCAGTGAGTACGTGGGGCCTGAGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSERHSSGQSPWAGP*NASWPVSTWGLSSC Trigger: GCAGCTGCTCAGGCCCCACGTACTCACTGGCCAGGAGGCATTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAACTATGCCTCTCTGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 90 bp | GCTGGATGTCTGAGTGGGCGTTGGCCACTGTGTGCCGCCGGACACTaGCACACTTCTCCAGGTATGCCTCCCCTTCCTGTTCTGTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGCLSGRWPLCAAGH*HTSPGMPPLPVLLE Trigger: CTCTAACAGAACAGGAAGGGGAGGCATACCTGGAGAAGTGTGGCAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | CATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCACGTTTATGTCTGAGTGGGCGTaGGCCACTGTGTGCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HWLLPPKMITGTAEAGTFMSEWA*ATVCRR Trigger: CCGGCGGCACACAGTGGCCAACGCCCACTCAGACAT...AAACGTGCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 90 bp | CTGTTAGAGGGGTCAAGACCATCTCGTTCAGTGGCCGGCCAACCGTaGTCATCAGAGAGGCATAGTTCAGGACAGTCACCTTGGGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLEGSRPSRSVAGQP*SSERHSSGQSPWAG Trigger: TCCGGCCCAAGGTGACTGTCCTGAACTATGCCTCTCTGATGACCACGGTTGGCCGGCCACTGAACGAGATGGTCTTGACCCCTCTAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | TCCACCCATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCCGGAAGGAGCCCATCTaGTGGAATTCAATGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STHWLLPPKMITGTAEAGRKEPI*WNSMGR Trigger: CCTGCCCATTGAATTCCACAAGATGGGCTCCTTCCG...GCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATGGGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAAGACTTGGCTTTCAGGACAGTCACCTaGGGCCGGACCCTGGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: DTRVGRPTDVSQRHEDLAFRTVT*GRTLEC Trigger: GCATTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAA...AGCCAAGTCTTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAGTGGGGATGTCTGAGTGGGCGTaGGCCACTGTGTGCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: WKSGKQWYEEPVIDTRVGMSEWA*ATVCRR Trigger: CCGGCGGCACACAGTGGCCAACGCCCACTCAGACAT...CCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | CATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCACGTTTCGGAAGGAGCCCATCTaGTGGAATTCAATGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HWLLPPKMITGTAEAGTFRKEPI*WNSMGR Trigger: CCTGCCCATTGAATTCCACAAGATGGGCTCCTTCCG...AAACGTGCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCCCAAACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAACTGTTCCAGGCAGAGTaGGAACTTAGCTGCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRPKHKDPGESGKAGSQELFQAE*ELSCRA Trigger: GGCTCTGCAGCTAAGTTCCAACTCTGCCTGGAACAG...TTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTTTGGGCCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 90 bp | GCGCTCAGGAAAAAGTTTCCGGTGTTCCAGGGAAAGTTTTCTTGCTaGAGAGAAACTAGCGATTCGGCTGGTTCTCGCCTCGCTCGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: ALRKKFPVFQGKFSC*RETSDSAGSRLARS Trigger: CGAGCGAGCGAGGCGAGAACCAGCCGAATCGCTAGTTTCTCTCCAGCAAGAAAACTTTCCCTGGAACACCGGAAACTTTTTCCTGAGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141814.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTCATAGACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAACTGTTCCAGGCAGAGTaGGAACTTAGCTGCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVIDTRVGRPTDVSQRHELFQAE*ELSCRA Trigger: GGCTCTGCAGCTAAGTTCCAACTCTGCCTGGAACAG...TTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTCTATGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GGGAACCGCAGAGGCTGGCACGTTTCAGATGCTTGTGTGTCATCCAACCTTCTGTGCAAGCCGCCCCCTTaGAAAACGTTGATCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GNRRGWHVSDACVSSNLLCKPPP*KTLITA Trigger: AGCTGTGATCAACGTTTTCAAAGGGGGCGGCTTGCA...CAGAAGGTTGGATGACACACAAGCATCTGAAACGTGCCAGCCTCTGCGGTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GACACCAGAGTGGGGAGGCCGACAGATGTTTCCCAAAGGCATGAAGACTTGGCTTGCAAGCCGCCCCCTTaGAAAACGTTGATCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DTRVGRPTDVSQRHEDLACKPPP*KTLITA Trigger: AGCTGTGATCAACGTTTTCAAAGGGGGCGGCTTGCA...AGCCAAGTCTTCATGCCTTTGGGAAACATCTGTCGGCCTCCCCACTCTGGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | CATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCACGTTTACAGAAGAAGGCAACTaGGACTGTGCCAACAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HWLLPPKMITGTAEAGTFTEEGN*DCANSS Trigger: GCTGCTGTTGGCACAGTCCAAGTTGCCTTCTTCTGT...AAACGTGCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GTGACGGTAAGGCACCATTTACTGAGAAGGTTCACTGAGAGGCGCAATGCAAGAGCAAGTAGCCCTCACTaGGGCCTGTGGGCTCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VTVRHHLLRRFTERRNARASSPH*GLWARE Trigger: TTCACGAGCCCACAGGCCCAAGTGAGGGCTACTTGC...TCTTGCATTGCGCCTCTCAGTGAACCTTCTCAGTAAATGGTGCCTTACCGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | AACATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTAGCAAGTAGCCCTCACTaGGGCCTGTGGGCTCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NIRIPVSQARLEVRKTVVASSPH*GLWARE Trigger: TTCACGAGCCCACAGGCCCAAGTGAGGGCTACTTGC...TACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGTTCAGGACAGTCACCTaGGGCCGGACCCTGGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: VLCSCTHTICIQMPSEEKFRTVT*GRTLEC Trigger: GCATTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAA...CTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | CATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTATGTGCAAGCCGCCCCCTTaGAAAACGTTGATCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HKDPGESGKAGSQENSGMCKPPP*KTLITA Trigger: AGCTGTGATCAACGTTTTCAAAGGGGGCGGCTTGCA...CATACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | TCCATGGAGGAGGAGAGGTGCCCTCATCCTAGCTCTAAAGTAGGAACGGGTTCCAGAACCTCAATCCGATaGTCACCTTCACACAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SMEEERCPHPSSKVGTGSRTSIR*SPSHSL Trigger: CAAGCTGTGTGAAGGTGACAATCGGATTGAGGTTCT...GGAACCCGTTCCTACTTTAGAGCTAGGATGAGGGCACCTCTCCTCCTCCATGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | CATAAGGATCCCGGTGAGTCAGGCAAGGCTGGAAGTCAGGAAAACAGTGGTATGACAGAAGAAGGCAACTaGGACTGTGCCAACAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HKDPGESGKAGSQENSGMTEEGN*DCANSS Trigger: GCTGCTGTTGGCACAGTCCAAGTTGCCTTCTTCTGT...CATACCACTGTTTTCCTGACTTCCAGCCTTGCCTGACTCACCGGGATCCTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTGTGCCCTAAAGTAAATAAGGCAATATTGCTCAATGCAAGAGCCCCCTTGTTCAGGACAGTCACCTaGGGCCGGACCCTGGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: GLCPKVNKAILLNARAPLFRTVT*GRTLEC Trigger: GCATTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAA...CAAGGGGGCTCTTGCATTGAGCAATATTGCCTTATTTACTTTAGGGCACAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GTGACGGTAAGGCACCATTTACTGAGAAGGTTCACTGAGAGGCGCAATGCAAGAACAGAAGAAGGCAACTaGGACTGTGCCAACAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTVRHHLLRRFTERRNARTEEGN*DCANSS Trigger: GCTGCTGTTGGCACAGTCCAAGTTGCCTTCTTCTGT...TCTTGCATTGCGCCTCTCAGTGAACCTTCTCAGTAAATGGTGCCTTACCGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 90 bp | CAGAATGAGCAGCATTTGTATAACAGAAGAAGGCAACTTGGACTGTaGCAACAGCAGCACGTCACCCAGCTTCACCTTCAGCAAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QNEQHLYNRRRQLGL*QQQHVTQLHLQQDQ Trigger: CTGGTCTTGCTGAAGGTGAAGCTGGGTGACGTGCTGCTGTTGGCACAGTCCAAGTTGCCTTCTTCTGTTATACAAATGCTGCTCATTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTGTGCCCTAAAGTAAATAAGGCAATATTGCTCAATGCAAGAGCCCCCTTGCGGAAGGAGCCCATCTaGTGGAATTCAATGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLCPKVNKAILLNARAPLRKEPI*WNSMGR Trigger: CCTGCCCATTGAATTCCACAAGATGGGCTCCTTCCG...CAAGGGGGCTCTTGCATTGAGCAATATTGCCTTATTTACTTTAGGGCACAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGAGTGGGGCAAAGGACAGTCCTTTaGCAAGAAGCTGGTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WKSGKQWYEEPVIDTRVGQRTVL*QEAGSG Trigger: TCCAGAACCAGCTTCTTGCAAAAGGACTGTCCTTTG...CCCCACTCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCTTGACAGAGACATAGAAGATAAGGAAAAAGGCATTTACAAAGCACACATGTCTGAGTGGGCGTaGGCCACTGTGTGCCGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVLDRDIEDKEKGIYKAHMSEWA*ATVCRR Trigger: CCGGCGGCACACAGTGGCCAACGCCCACTCAGACAT...GTGTGCTTTGTAAATGCCTTTTTCCTTATCTTCTATGTCTCTGTCAAGGACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | CAAGGCTGGAAGTCAGGAAAACAGTGGTATGAGGAGCCAGTCATAGACACCAGACAAAGGACAGTCCTTTaGCAAGAAGCTGGTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGWKSGKQWYEEPVIDTRQRTVL*QEAGSG Trigger: TCCAGAACCAGCTTCTTGCAAAAGGACTGTCCTTTG...TCTGGTGTCTATGACTGGCTCCTCATACCACTGTTTTCCTGACTTCCAGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | CATTGGCTTCTGCCCCCTAAGATGATAACGGGAACCGCAGAGGCTGGCACGTTTCAGAATGAGCAGCATTaGTATAACAGAAGAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HWLLPPKMITGTAEAGTFQNEQH*YNRRRQ Trigger: TTGCCTTCTTCTGTTATACAAATGCTGCTCATTCTG...AAACGTGCCAGCCTCTGCGGTTCCCGTTATCATCTTAGGGGGCAGAAGCCAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | TCCATGGAGGAGGAGAGGTGCCCTCATCCTAGCTCTAAAGTAGGAACGGGTTCCCAGAATGAGCAGCATTaGTATAACAGAAGAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SMEEERCPHPSSKVGTGSQNEQH*YNRRRQ Trigger: TTGCCTTCTTCTGTTATACAAATGCTGCTCATTCTG...GGAACCCGTTCCTACTTTAGAGCTAGGATGAGGGCACCTCTCCTCCTCCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTCCTTGACAGAGACATAGAAGATAAGGAAAAAGGCATTTACAAAGCACACGCAAGTAGCCCTCACTaGGGCCTGTGGGCTCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVLDRDIEDKEKGIYKAHASSPH*GLWARE Trigger: TTCACGAGCCCACAGGCCCAAGTGAGGGCTACTTGC...GTGTGCTTTGTAAATGCCTTTTTCCTTATCTTCTATGTCTCTGTCAAGGACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTGTGCCCTAAAGTAAATAAGGCAATATTGCTCAATGCAAGAGCCCCCTTGAGAACCTCAATCCGATaGTCACCTTCACACAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GLCPKVNKAILLNARAPLRTSIR*SPSHSL Trigger: CAAGCTGTGTGAAGGTGACAATCGGATTGAGGTTCT...CAAGGGGGCTCTTGCATTGAGCAATATTGCCTTATTTACTTTAGGGCACAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCACAAAGGACAGTCCTTTaGCAAGAAGCTGGTTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCVIQPSATTPEHYKLGAQRTVL*QEAGSG Trigger: TCCAGAACCAGCTTCTTGCAAAAGGACTGTCCTTTG...TGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | TTGTGTGTCATCCAACCTTCTGCTACAACGCCAGAACATTATAAACTAGGAGCAAGAACCTCAATCCGATaGTCACCTTCACACAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCVIQPSATTPEHYKLGARTSIR*SPSHSL Trigger: CAAGCTGTGTGAAGGTGACAATCGGATTGAGGTTCT...TGCTCCTAGTTTATAATGTTCTGGCGTTGTAGCAGAAGGTTGGATGACACACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTGTTCATGCACACACACTATATGCATTCAGATGCCCTCAGAGGAGAAGCAGAATGAGCAGCATTaGTATAACAGAAGAAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VLCSCTHTICIQMPSEEKQNEQH*YNRRRQ Trigger: TTGCCTTCTTCTGTTATACAAATGCTGCTCATTCTG...CTTCTCCTCTGAGGGCATCTGAATGCATATAGTGTGTGTGCATGAACACAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 72 bp | CGCCAGCCTCCTCCCCCAACCCTGAGTGCATCATGGTaGCCATCGCCAGCAGCTGGATGTCTGAGTGGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RQPPPPTLSASW*PSPAAGCLSGR Trigger: ACGCCCACTCAGACATCCAGCTGCTGGCGATGGCCACCATGATGCACTCAGGGTTGGGGGAGGAGGCTGGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CAA 72 bp | GTGGCCATCGCCAGCAGCTGGATGTCTGAGTGGGCGTaGGCCACTGTGTGCCGCCGGACACTGCCACACTTC | + |
|
Preference number: 6 (lower is better) Translates to: VAIASSWMSEWA*ATVCRRTLPHF Trigger: GAAGTGTGGCAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTGGCGATGGCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS TCA 72 bp | GTGCATCATGGTGGCCATCGCCAGCAGCTGGATGTCTaGGTGGGCGTTGGCCACTGTGTGCCGCCGGACACT | + |
|
Preference number: 6 (lower is better) Translates to: VHHGGHRQQLDV*VGVGHCVPPDT Trigger: AGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTGGCGATGGCCACCATGATGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 72 bp | GTCTGCACACTGTTCCAGGCAGAGTTGGAACTTAGCTaGAGAGCCTGCCGGGCAGCCTGGAAGCGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VCTLFQAELELS*RACRAAWKRGS Trigger: GCTGCCCCGCTTCCAGGCTGCCCGGCAGGCTCTGCAGCTAAGTTCCAACTCTGCCTGGAACAGTGTGCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043845.14 ENSMUST00000125985.8 ENSMUST00000154525.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 72 bp | TGGCCATCGCCAGCAGCTGGATGTCTGAGTGGGCGTTaGCCACTGTGTGCCGCCGGACACTGCCACACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WPSPAAGCLSGR*PLCAAGHCHTS Trigger: AGAAGTGTGGCAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTGGCGATGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 72 bp | ATCATGGTGGCCATCGCCAGCAGCTGGATGTCTGAGTaGGCGTTGGCCACTGTGTGCCGCCGGACACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: IMVAIASSWMSE*ALATVCRRTLP Trigger: TGGCAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTGGCGATGGCCACCATGAT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 72 bp | CTGAGTGGGCGTTGGCCACTGTGTGCCGCCGGACACTaGCACACTTCTCCAGGTATGCCTCCCCTTCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSGRWPLCAAGH*HTSPGMPPLPV Trigger: AACAGGAAGGGGAGGCATACCTGGAGAAGTGTGGCAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 72 bp | AGCAGCTGGATGTCTGAGTGGGCGTTGGCCACTGTGTaGCGCCGGACACTGCCACACTTCTCCAGGTATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSWMSEWALATV*RRTLPHFSRYA Trigger: GGCATACCTGGAGAAGTGTGGCAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 72 bp | GGGCAGCTCGCTGAGCACAGGGGAGCTCATAAAGCGTaGTCTAGGCCGGCGGAAGGAGCCCATCTTGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GQLAEHRGAHKA*SRPAEGAHLVE Trigger: TTCCACAAGATGGGCTCCTTCCGCCGGCCTAGACCACGCTTTATGAGCTCCCCTGTGCTCAGCGAGCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000043845.14 ENSMUST00000124802.2 ENSMUST00000125985.8 ENSMUST00000144549.2 ENSMUST00000154525.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 72 bp | AGGCATAGTTCAGGACAGTCACCTTGGGCCGGACCCTaGAATGCCTCCTGGCCAGTGAGTACGTGGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RHSSGQSPWAGP*NASWPVSTWGL Trigger: CAGGCCCCACGTACTCACTGGCCAGGAGGCATTCCAGGGTCCGGCCCAAGGTGACTGTCCTGAACTATGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 72 bp | AACCCTGAGTGCATCATGGTGGCCATCGCCAGCAGCTaGATGTCTGAGTGGGCGTTGGCCACTGTGTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: NPECIMVAIASS*MSEWALATVCR Trigger: GCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTGGCGATGGCCACCATGATGCACTCAGGGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CAA 90 bp | TGCATCATGGTGGCCATCGCCAGCAGCTGGATGTCTGAGTGGGCGTaGGCCACTGTGTGCCGCCGGACACTGCCACACTTCTCCAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: CIMVAIASSWMSEWA*ATVCRRTLPHFSRY Trigger: ATACCTGGAGAAGTGTGGCAGTGTCCGGCGGCACACAGTGGCCAACGCCCACTCAGACATCCAGCTGCTGGCGATGGCCACCATGATGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 72 bp | CGTCTTCTAGTTCCAGTTCATCGGGGCTGTCGAGGATaGTGGGTTCACTGGAGCACTGGCGGTGTGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLLVPVHRGCRG*WVHWSTGGVVG Trigger: CCCCACCACACCGCCAGTGCTCCAGTGAACCCAGCATCCTCGACAGCCCCGATGAACTGGAACTAGAAGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CAA 72 bp | ATAAAGCGTGGTCTAGGCCGGCGGAAGGAGCCCATCTaGTGGAATTCAATGGGCAGGAGGGGAGCGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: IKRGLGRRKEPI*WNSMGRRGARP Trigger: CGGCCTCGCTCCCCTCCTGCCCATTGAATTCCACAAGATGGGCTCCTTCCGCCGGCCTAGACCACGCTTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000043845.14 ENSMUST00000124802.2 ENSMUST00000125985.8 ENSMUST00000144549.2 ENSMUST00000154525.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 72 bp | ATTGCCTGCAGGGTAGGGAGAGTCTCGGTGAAGAAGTaGTCCCAGACTTCAGCCAGAACCTCAATCCGATTG | + |
|
Preference number: 6 (lower is better) Translates to: IACRVGRVSVKK*SQTSARTSIRL Trigger: CAATCGGATTGAGGTTCTGGCTGAAGTCTGGGACCACTTCTTCACCGAGACTCTCCCTACCCTGCAGGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 72 bp | GATGGTCAGCTCCTGTCCCTGAACCGGATAAAATATTaGCTGCAGGGTAGGGAGAGTCTCGGTGAAGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: DGQLLSLNRIKY*LQGRESLGEEV Trigger: CACTTCTTCACCGAGACTCTCCCTACCCTGCAGGCAATATTTTATCCGGTTCAGGGACAGGAGCTGACCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043845.14 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CAA 72 bp | AGCCGCCTGATGCTTTCGTTCAGTGCATACAGCTCATaGCTCTGCAAGCCGCCCCCTTTGAAAACGTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: SRLMLSFSAYSS*LCKPPPLKTLI Trigger: GATCAACGTTTTCAAAGGGGGCGGCTTGCAGAGCAATGAGCTGTATGCACTGAACGAAAGCATCAGGCGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043845.14 ENSMUST00000125985.8 ENSMUST00000154525.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CAA 72 bp | AGTGCATACAGCTCATTGCTCTGCAAGCCGCCCCCTTaGAAAACGTTGATCACAGCTGTCTGCACACTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SAYSSLLCKPPP*KTLITAVCTLF Trigger: GAACAGTGTGCAGACAGCTGTGATCAACGTTTTCAAAGGGGGCGGCTTGCAGAGCAATGAGCTGTATGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043845.14 ENSMUST00000125985.8 ENSMUST00000154525.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CAA 90 bp | ACACTCTGCAGAATGAGCAGCATTTGTATAACAGAAGAAGGCAACTaGGACTGTGCCAACAGCAGCACGTCACCCAGCTTCACCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLCRMSSICITEEGN*DCANSSTSPSFTFS Trigger: GCTGAAGGTGAAGCTGGGTGACGTGCTGCTGTTGGCACAGTCCAAGTTGCCTTCTTCTGTTATACAAATGCTGCTCATTCTGCAGAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 72 bp | CTGATGCTTTCGTTCAGTGCATACAGCTCATTGCTCTaGAAGCCGCCCCCTTTGAAAACGTTGATCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LMLSFSAYSSLL*KPPPLKTLITA Trigger: AGCTGTGATCAACGTTTTCAAAGGGGGCGGCTTGCAGAGCAATGAGCTGTATGCACTGAACGAAAGCATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043845.14 ENSMUST00000125985.8 ENSMUST00000154525.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 72 bp | CAGCATTTGTATAACAGAAGAAGGCAACTTGGACTGTaGCAACAGCAGCACGTCACCCAGCTTCACCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QHLYNRRRQLGL*QQQHVTQLHLQ Trigger: CTGAAGGTGAAGCTGGGTGACGTGCTGCTGTTGGCACAGTCCAAGTTGCCTTCTTCTGTTATACAAATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS CCA 72 bp | AAAAAGTTTCCGGTGTTCCAGGGAAAGTTTTCTTGCTaGAGAGAAACTAGCGATTCGGCTGGTTCTCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: KKFPVFQGKFSC*RETSDSAGSRL Trigger: GAGGCGAGAACCAGCCGAATCGCTAGTTTCTCTCCAGCAAGAAAACTTTCCCTGGAACACCGGAAACTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141814.2 |
||
| CDS CAA 72 bp | AGAATGAGCAGCATTTGTATAACAGAAGAAGGCAACTaGGACTGTGCCAACAGCAGCACGTCACCCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RMSSICITEEGN*DCANSSTSPSF Trigger: GAAGCTGGGTGACGTGCTGCTGTTGGCACAGTCCAAGTTGCCTTCTTCTGTTATACAAATGCTGCTCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000141814.2 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||
| CDS GCA 72 bp | CAGCTTGATCTTCTCCTCCACAAAGGACAGTCCTTTTaGAAGAAGCTGGTTCTGGAAATAGTCAGTAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: QLDLLLHKGQSF*KKLVLEIVSNE Trigger: TTCATTACTGACTATTTCCAGAACCAGCTTCTTGCAAAAGGACTGTCCTTTGTGGAGGAGAAGATCAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043845.14 ENSMUST00000125985.8 ENSMUST00000163762.8 ENSMUST00000171088.8 |
||