Pregenerated sensors for PRR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036106Ensembl transcript IDs: ENSMUST00000065499.5, ENSMUST00000171460.8
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGTCACTCCGGAGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTaGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAAGGGTGGGGT | + |
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Preference number: 1 (lower is better) Translates to: PSLRRPGWAGIGRAR*FHIFLGKCGHQGWG Trigger: ACCCCACCCTTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCTCCGGAGTGACGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR TCA 90 bp | GGTAAGTGTGGGCACCAAGGGTGGGGTGGGCAGGAGGGCACATGGTaGCCCCATCCATCCTCCAGGTGGTTGAGTATGCATCTGGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: GKCGHQGWGGQEGTW*PHPSSRWLSMHLGS Trigger: ACTGCCCAGATGCATACTCAACCACCTGGAGGATGGATGGGGTCACCATGTGCCCTCCTGCCCACCCCACCCTTGGTGCCCACACTTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTGCACCAAGGGTGGGGTaGGCAGGAGGGCACATGGTG | + |
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Preference number: 2 (lower is better) Translates to: RPGWAGIGRARWFHIFLGAPRVG*AGGHMV Trigger: CACCATGTGCCCTCCTGCCCACCCCACCCTTGGTGC...ACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTAGTGACTTGAGGCAGTaGCGGGGGCTGGCAAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: SANWGSQSVRVSRGGGWVSDLRQ*RGLARV Trigger: TACTCTTGCCAGCCCCCGTCACTGCCTCAAGTCACT...AACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCCCAATCAGTCCGGGTaGGCAGGGGTGGTGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: WAGIGRARWFHIFLGKCGPNQSG*AGVVDG Trigger: CCCATCCACCACCCCTGCTCACCCGGACTGATTGGG...CCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAACCCAATCAGTCCGGGTaGGCAGGGGTGGTGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: GIGRARWFHIFLGKCGHQPNQSG*AGVVDG Trigger: CCCATCCACCACCCCTGCTCACCCGGACTGATTGGG...TTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCTGGGCAGTGCCAACTaGGGGTCCCAATCAGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: WAGIGRARWFHIFLGKCGLGSAN*GSQSVR Trigger: CCGGACTGATTGGGACCCCCAGTTGGCACTGCCCAG...CCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAACAGGAGGGCACATGGTaGCCCCATCCATCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GIGRARWFHIFLGKCGHQQEGTW*PHPSSR Trigger: CCTGGAGGATGGATGGGGTCACCATGTGCCCTCCTG...TTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR-3UTR CCA 90 bp | GGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAACATCCATCCTCCAGGTaGTTGAGTATGCATCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: GIGRARWFHIFLGKCGHQHPSSR*LSMHLG Trigger: GCCCAGATGCATACTCAACCACCTGGAGGATGGATG...TTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTATTTCATGCCTTCCTATTTTGTGGCCACCCAGAGCAGAGGGAGGCAGGCAACTGGGAGTATAAAGTaGCTTGAGGCAGTGACGGGG | + |
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Preference number: 2 (lower is better) Translates to: IYFMPSYFVATQSRGRQATGSIK*LEAVTG Trigger: CCCCGTCACTGCCTCAAGTCACTTTATACTCCCAGT...TGCCTGCCTCCCTCTGCTCTGGGTGGCCACAAAATAGGAAGGCATGAAATAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR TCA 72 bp | GCAGAGGGAGGCAGGCAGGCAGGTCTGACTGTGGCTTaGGTCCCGTCACTCCGGAGGCCAGGCTGGGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: AEGGRQAGLTVA*VPSLRRPGWAG Trigger: GCCAGCCCAGCCTGGCCTCCGGAGTGACGGGACTCAAGCCACAGTCAGACCTGCCTGCCTGCCTCCCTCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR TCA 72 bp | GGGCACCAAGGGTGGGGTGGGCAGGAGGGCACATGGTaGCCCCATCCATCCTCCAGGTGGTTGAGTATGCAT | + |
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Preference number: 3 (lower is better) Translates to: GHQGWGGQEGTW*PHPSSRWLSMH Trigger: ATGCATACTCAACCACCTGGAGGATGGATGGGGTCACCATGTGCCCTCCTGCCCACCCCACCCTTGGTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR CCA 72 bp | CGGAGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTaGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAA | + |
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Preference number: 3 (lower is better) Translates to: RRPGWAGIGRAR*FHIFLGKCGHQ Trigger: TTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR-3UTR CAA 90 bp | GGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAACCATCCTCCAGGTGGTaGAGTATGCATCTGGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: GIGRARWFHIFLGKCGHQPSSRW*SMHLGS Trigger: ACTGCCCAGATGCATACTCAACCACCTGGAGGATGG...TTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR TCA 72 bp | GGTGGATGGGTTTTCCAACAGACTGGGAGTATAAAGTaGCTTGAGGCAGTGACGGGGGCTGGCAAGAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: GGWVFQQTGSIK*LEAVTGAGKSN Trigger: GTTACTCTTGCCAGCCCCCGTCACTGCCTCAAGTCACTTTATACTCCCAGTCTGTTGGAAAACCCATCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| 3UTR CAA 72 bp | AGCAGAGGGAGGCAGGCAGGCAGGTCTGACTGTGGCTaGAGTCCCGTCACTCCGGAGGCCAGGCTGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SRGRQAGRSDCG*SPVTPEARLGW Trigger: CCAGCCCAGCCTGGCCTCCGGAGTGACGGGACTCAAGCCACAGTCAGACCTGCCTGCCTGCCTCCCTCTGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | CAGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTGTTCCAGGTGGCGTTaGCGCAGGCCCGGCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QCQLGVPISPGEQGWWMGCSRWR*RRPGAA Trigger: AGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACA...ACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | CAGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTGCAGCAGGGCGAGCTaGCGCACCGACGGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QCQLGVPISPGEQGWWMGCSRAS*RTDGSL Trigger: CAAGGAGCCGTCGGTGCGCCAGCTCGCCCTGCTGCA...ACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | TGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTTGTTCCAGGTGGCGTTaGCGCAGGCCCGGCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: CQLGVPISPGEQGWWMGFCSRWR*RRPGAA Trigger: AGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACA...AAAACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | AGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTGGATACTGTTCCAGGTaGCGTTGGCGCAGGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SANWGSQSVRVSRGGGWVGYCSR*RWRRPG Trigger: GCCGGGCCTGCGCCAACGCCACCTGGAACAGTATCC...AACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTTGCAGCAGGGCGAGCTaGCGCACCGACGGCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RPGWAGIGRARWFHIFLGCSRAS*RTDGSL Trigger: CAAGGAGCCGTCGGTGCGCCAGCTCGCCCTGCTGCA...ACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | AGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTTGGGGAGCCATGGCCTaGGCCCTGTTCCGGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: SANWGSQSVRVSRGGGWVWGAMA*ALFRGM Trigger: CATTCCCCGGAACAGGGCCCAGGCCATGGCTCCCCA...AACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR TCA 90 bp | CAGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTGGCGACACCACCTTCTaGATCAGTGTCTCGAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: QCQLGVPISPGEQGWWMGGDTTF*ISVSRR Trigger: GCGCCTCGAGACACTGATTCAGAAGGTGGTGTCGCC...ACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR GCA 90 bp | CAGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTGCCGCTGGCTGCTGTaGCTTCTGCTTCATGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: QCQLGVPISPGEQGWWMGCRWLL*LLLHAR Trigger: CCGAGCATGAAGCAGAAGGCACAGCAGCCAGCGGCA...ACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTTGGGGAGCCATGGCCTaGGCCCTGTTCCGGGGAATG | + |
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Preference number: 4 (lower is better) Translates to: RPGWAGIGRARWFHIFLGWGAMA*ALFRGM Trigger: CATTCCCCGGAACAGGGCCCAGGCCATGGCTCCCCA...ACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTGCTGGGGCAAGGCCCTaGGTGGGGTGTTGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RPGWAGIGRARWFHIFLGAGARP*VGCWRR Trigger: TCTTCTCCAACACCCCACTCAGGGCCTTGCCCCAGC...ACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR GCA 90 bp | TGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTGTCTGCGGATGCTCGTaGCGCTGGCTGCTGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: CQLGVPISPGEQGWWMGFVCGCS*RWLLCL Trigger: AAGGCACAGCAGCCAGCGGCACGAGCATCCGCAGAC...AAAACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAAGGGTGGGGGCAGCCCCTTGCGCTaGAAGACCGCGATCACTCCG | + |
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Preference number: 4 (lower is better) Translates to: AEPAGFTFSWVSVGTKGGGSPLR*KTAITP Trigger: CGGAGTGATCGCGGTCTTCCAGCGCAAGGGGCTGCC...CCCACCCTTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | AGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTGGGGGTATAGTCTGCTaGGGCAAGGCCCTGAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RPGWAGIGRARWFHIFLGGGIVC*GKALSG Trigger: CCCACTCAGGGCCTTGCCCCAGCAGACTATACCCCC...ACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR TCA 90 bp | TGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTCCAGGTCTCCGCCAATaGGTCCAGCAGCTTCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: CQLGVPISPGEQGWWMGFPGLRQ*VQQLLS Trigger: GGACAGAAGCTGCTGGACTCATTGGCGGAGACCTGG...AAAACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR TCA 90 bp | TGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTGGCGACACCACCTTCTaGATCAGTGTCTCGAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: CQLGVPISPGEQGWWMGFGDTTF*ISVSRR Trigger: GCGCCTCGAGACACTGATTCAGAAGGTGGTGTCGCC...AAAACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR TCA 90 bp | TGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTGCTCGGCCACAGGATTaGGCAGGGGAGTGTTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: CQLGVPISPGEQGWWMGFARPQD*AGECCS Trigger: GCTACAACACTCCCCTGCTCAATCCTGTGGCCGAGC...AAAACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | CAGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTCTTCAGTCACACCCCTaGACTCATGTACCCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: QCQLGVPISPGEQGWWMGLQSHP*THVPPA Trigger: TGCAGGGGGTACATGAGTCCAGGGGTGTGACTGAAG...ACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAAGGGTGGGGGGCAAGGCCCTGAGTaGGGTGTTGGAGAAGACCGG | + |
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Preference number: 4 (lower is better) Translates to: AEPAGFTFSWVSVGTKGGGQGPE*GVGEDR Trigger: CCGGTCTTCTCCAACACCCCACTCAGGGCCTTGCCC...CCCACCCTTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAAGGGTGGGGGGGGTATAGTCTGCTaGGGCAAGGCCCTGAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AEPAGFTFSWVSVGTKGGGGIVC*GKALSG Trigger: CCCACTCAGGGCCTTGCCCCAGCAGACTATACCCCC...CCCACCCTTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGC 61% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | GAGGCAGTGACGGGGGCTGGCAAGAGTAACAAGTCTCTCTCTCACACACACACAGTGGATGGGGAGCCATaGCCTGGGCCCTGTTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: EAVTGAGKSNKSLSHTHTVDGEP*PGPCSG Trigger: CCCGGAACAGGGCCCAGGCCATGGCTCCCCATCCAC...TGTGTGTGTGTGAGAGAGAGACTTGTTACTCTTGCCAGCCCCCGTCACTGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTTCACCATGCCCTTCGTaGGCAGCTGGTTCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RPGWAGIGRARWFHIFLGSPCPS*AAGSAG Trigger: ACCTGCAGAACCAGCTGCTCACGAAGGGCATGGTGA...ACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR GCA 90 bp | GAGGCAGTGACGGGGGCTGGCAAGAGTAACAAGTCTCTCTCTCACACACACACAGGTCGGGCAGCCCCTTaGGCTGGAAGACCGCGATCA | + |
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Preference number: 4 (lower is better) Translates to: EAVTGAGKSNKSLSHTHTGRAAP*AGRPRS Trigger: TGATCGCGGTCTTCCAGCGCAAGGGGCTGCCCGACC...TGTGTGTGTGTGAGAGAGAGACTTGTTACTCTTGCCAGCCCCCGTCACTGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | GTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTCCAACAGACTGGGAGTATAAAGGGCAGCCCCTTGCGCTaGAAGACCGCGATCACTCCG | + |
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Preference number: 4 (lower is better) Translates to: VRVSRGGGWVFQQTGSIKGSPLR*KTAITP Trigger: CGGAGTGATCGCGGTCTTCCAGCGCAAGGGGCTGCC...CTTTATACTCCCAGTCTGTTGGAAAACCCATCCACCACCCCTGCTCACCCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | TGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGAGGATGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: WAGIGRARWFHIFLGKCGRMKSS*SGSPLR Trigger: GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCATCCT...CCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | CAGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTGATGGCCTGCAGGGTTaGCAGCACATCACTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: QCQLGVPISPGEQGWWMGDGLQG*QHITEE Trigger: TTCTTCAGTGATGTGCTGCCAACCCTGCAGGCCATC...ACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | GGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAAGTCCCCGAAGGGCCCTaGCCAGGCGTGTCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: GIGRARWFHIFLGKCGHQVPEGP*PGVSTK Trigger: CTTTGTGGACACGCCTGGCCAGGGCCCTTCGGGGAC...TTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | GTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTCCAACAGACTGGGAGTATAAAGGTCCCCGAAGGGCCCTaGCCAGGCGTGTCCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: VRVSRGGGWVFQQTGSIKVPEGP*PGVSTK Trigger: CTTTGTGGACACGCCTGGCCAGGGCCCTTCGGGGAC...CTTTATACTCCCAGTCTGTTGGAAAACCCATCCACCACCCCTGCTCACCCGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR TCA 90 bp | GCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAAGGGTGGGTATCCCTTCCGAGTCTaGGTCCGCGGACTCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: AEPAGFTFSWVSVGTKGGYPFRV*VRGLQD Trigger: ATCCTGGAGTCCGCGGACTCAGACTCGGAAGGGATA...CCCACCCTTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR GCA 90 bp | GTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTCCAACAGACTGGGAGTATAAAGGTCTGCGGATGCTCGTaGCGCTGGCTGCTGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRVSRGGGWVFQQTGSIKVCGCS*RWLLCL Trigger: AAGGCACAGCAGCCAGCGGCACGAGCATCCGCAGAC...CTTTATACTCCCAGTCTGTTGGAAAACCCATCCACCACCCCTGCTCACCCGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGTGACGGGGGCTGGCAAGAGTAACAAGTCTCTCTCTCACACACACACAAGGATGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EAVTGAGKSNKSLSHTHTRMKSS*SGSPLR Trigger: GCGCAAGGGGCTGCCCGACCAGGAGCTCTTCATCCT...TGTGTGTGTGTGAGAGAGAGACTTGTTACTCTTGCCAGCCCCCGTCACTGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTGCACAGGATAGAAGATaGCCTGCAGGGTTGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGWAGIGRARWFHIFLGAQDRR*PAGLAA Trigger: TGCTGCCAACCCTGCAGGCCATCTTCTATCCTGTGC...ACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CCA 90 bp | TGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTCTTCAGTCACACCCCTaGACTCATGTACCCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CQLGVPISPGEQGWWMGFLQSHP*THVPPA Trigger: TGCAGGGGGTACATGAGTCCAGGGGTGTGACTGAAG...AAAACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGGGATGCTCGTGCCGCTaGCTGCTGTGCCTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WAGIGRARWFHIFLGKCGGCSCR*LLCLLL Trigger: AAGCAGAAGGCACAGCAGCCAGCGGCACGAGCATCC...CCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CCA 90 bp | GGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAAGGGCAAGGCCCTGAGTaGGGTGTTGGAGAAGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: GIGRARWFHIFLGKCGHQGQGPE*GVGEDR Trigger: CCGGTCTTCTCCAACACCCCACTCAGGGCCTTGCCC...TTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGTCTGCAGGTACTCAGTaGAGAAGGACCCCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WAGIGRARWFHIFLGKCGSAGTQ*RRTPAP Trigger: CGGAGCTGGGGTCCTTCTTCACTGAGTACCTGCAGA...CCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGTCACCATGCCCTTCGTaGGCAGCTGGTTCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WAGIGRARWFHIFLGKCGSPCPS*AAGSAG Trigger: ACCTGCAGAACCAGCTGCTCACGAAGGGCATGGTGA...CCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR TCA 90 bp | GTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTCCAACAGACTGGGAGTATAAAGGCTCGGCCACAGGATTaGGCAGGGGAGTGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRVSRGGGWVFQQTGSIKARPQD*AGECCS Trigger: GCTACAACACTCCCCTGCTCAATCCTGTGGCCGAGC...CTTTATACTCCCAGTCTGTTGGAAAACCCATCCACCACCCCTGCTCACCCGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTCCCGCCCAAAGTCAATaGATATCCCTTCCGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPGWAGIGRARWFHIFLGPAQSQ*ISLPSL Trigger: CAGACTCGGAAGGGATATTCATTGACTTTGGGCGGG...ACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTGTGAGCAGCTGGTTCTaGAGGTACTCAGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SANWGSQSVRVSRGGGWVVSSWF*RYSVKK Trigger: CTTCTTCACTGAGTACCTGCAGAACCAGCTGCTCAC...AACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATTTCATGCCTTCCTATTTTGTGGCCACCCAGAGCAGAGGGAGGCAGGCAGTGGATGGGGAGCCATaGCCTGGGCCCTGTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: IYFMPSYFVATQSRGRQAVDGEP*PGPCSG Trigger: CCCGGAACAGGGCCCAGGCCATGGCTCCCCATCCAC...TGCCTGCCTCCCTCTGCTCTGGGTGGCCACAAAATAGGAAGGCATGAAATAAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCAGTGACGGGGGCTGGCAAGAGTAACAAGTCTCTCTCTCACACACACACAGGCTGGGCGAACTCATaGACTTCAACCTGCGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EAVTGAGKSNKSLSHTHTGWANS*TSTCGE Trigger: CTCTCCGCAGGTTGAAGTTCATGAGTTCGCCCAGCC...TGTGTGTGTGTGAGAGAGAGACTTGTTACTCTTGCCAGCCCCCGTCACTGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065499.5 |
||
| CDS-3UTR TCA 90 bp | GAGGCAGTGACGGGGGCTGGCAAGAGTAACAAGTCTCTCTCTCACACACACACATATCCCTTCCGAGTCTaGGTCCGCGGACTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EAVTGAGKSNKSLSHTHTYPFRV*VRGLQD Trigger: ATCCTGGAGTCCGCGGACTCAGACTCGGAAGGGATA...TGTGTGTGTGTGAGAGAGAGACTTGTTACTCTTGCCAGCCCCCGTCACTGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR GCA 90 bp | ATTTATTTCATGCCTTCCTATTTTGTGGCCACCCAGAGCAGAGGGAGGCAGGCAGGTCGGGCAGCCCCTTaGGCTGGAAGACCGCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: IYFMPSYFVATQSRGRQAGRAAP*AGRPRS Trigger: TGATCGCGGTCTTCCAGCGCAAGGGGCTGCCCGACC...TGCCTGCCTCCCTCTGCTCTGGGTGGCCACAAAATAGGAAGGCATGAAATAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR GCA 90 bp | TGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTGTGAGCAGCTGGTTCTaGAGGTACTCAGTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CQLGVPISPGEQGWWMGFVSSWF*RYSVKK Trigger: CTTCTTCACTGAGTACCTGCAGAACCAGCTGCTCAC...AAAACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CCA 90 bp | TGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGGCACAGGATAGAAGATaGCCTGCAGGGTTGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WAGIGRARWFHIFLGKCGAQDRR*PAGLAA Trigger: TGCTGCCAACCCTGCAGGCCATCTTCTATCCTGTGC...CCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCCCGCCCAAAGTCAATaGATATCCCTTCCGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WAGIGRARWFHIFLGKCGPAQSQ*ISLPSL Trigger: CAGACTCGGAAGGGATATTCATTGACTTTGGGCGGG...CCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTACAAGGTCCTTCATTaGAATAGAGACCATAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCQLGVPISPGEQGWWMGYKVLH*NRDHRC Trigger: GCACCTATGGTCTCTATTCCAATGAAGGACCTTGTA...ACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | GTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTCCAACAGACTGGGAGTATAAAGGATGGCCTGCAGGGTTaGCAGCACATCACTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRVSRGGGWVFQQTGSIKDGLQG*QHITEE Trigger: TTCTTCAGTGATGTGCTGCCAACCCTGCAGGCCATC...CTTTATACTCCCAGTCTGTTGGAAAACCCATCCACCACCCCTGCTCACCCGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | ATTTATTTCATGCCTTCCTATTTTGTGGCCACCCAGAGCAGAGGGAGGCAGGCAGGATGCTCGTGCCGCTaGCTGCTGTGCCTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IYFMPSYFVATQSRGRQAGCSCR*LLCLLL Trigger: AAGCAGAAGGCACAGCAGCCAGCGGCACGAGCATCC...TGCCTGCCTCCCTCTGCTCTGGGTGGCCACAAAATAGGAAGGCATGAAATAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR TCA 90 bp | ATTTATTTCATGCCTTCCTATTTTGTGGCCACCCAGAGCAGAGGGAGGCAGGCATCTGCAGGTACTCAGTaGAGAAGGACCCCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IYFMPSYFVATQSRGRQASAGTQ*RRTPAP Trigger: CGGAGCTGGGGTCCTTCTTCACTGAGTACCTGCAGA...TGCCTGCCTCCCTCTGCTCTGGGTGGCCACAAAATAGGAAGGCATGAAATAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR TCA 90 bp | TGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGTTGGCAGCACATCACTaGAGAAGAAATCCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WAGIGRARWFHIFLGKCGLAAHH*RRNPRS Trigger: AGACCTGGGATTTCTTCTTCAGTGATGTGCTGCCAA...CCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | TGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTTACAAGGTCCTTCATTaGAATAGAGACCATAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CQLGVPISPGEQGWWMGFYKVLH*NRDHRC Trigger: GCACCTATGGTCTCTATTCCAATGAAGGACCTTGTA...AAAACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | GAGGCAGTGACGGGGGCTGGCAAGAGTAACAAGTCTCTCTCTCACACACACACAGAGTGTTGTAGCTTTTaGAGCGCACCACTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EAVTGAGKSNKSLSHTHTECCSF*SAPLGS Trigger: AGAACCCAGTGGTGCGCTCCAAAAGCTACAACACTC...TGTGTGTGTGTGAGAGAGAGACTTGTTACTCTTGCCAGCCCCCGTCACTGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CCA 90 bp | GGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAAGAGTGTTGTAGCTTTTaGAGCGCACCACTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GIGRARWFHIFLGKCGHQECCSF*SAPLGS Trigger: AGAACCCAGTGGTGCGCTCCAAAAGCTACAACACTC...TTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR TCA 90 bp | GTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTCCAACAGACTGGGAGTATAAAGTTGGCAGCACATCACTaGAGAAGAAATCCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRVSRGGGWVFQQTGSIKLAAHH*RRNPRS Trigger: AGACCTGGGATTTCTTCTTCAGTGATGTGCTGCCAA...CTTTATACTCCCAGTCTGTTGGAAAACCCATCCACCACCCCTGCTCACCCGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 90 bp | GGATACTGTTCCAGGTGGCGTTGGCGCAGGCCCGGCGCTGCTGCGTaGCCCGCTCGTCCGTACCCGCCGCGCCCGGCTCCCTCTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GYCSRWRWRRPGAAA*PARPYPPRPAPSCP Trigger: TGGGCAAGAGGGAGCCGGGCGCGGCGGGTACGGACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGTATCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 90 bp | CCGTTATGGATACTGTTCCAGGTGGCGTTGGCGCAGGCCCGGCGCTaGTGCGTGCCCCGCTCGTCCGTACCCGCCGCGCCCGGCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLWILFQVALAQARR*CVPRSSVPAAPGSL Trigger: GAGGGAGCCGGGCGCGGCGGGTACGGACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGTATCCATAACGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 90 bp | TTATGGATACTGTTCCAGGTGGCGTTGGCGCAGGCCCGGCGCTGCTaGGTGCCCCGCTCGTCCGTACCCGCCGCGCCCGGCTCCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWILFQVALAQARRC*VPRSSVPAAPGSLL Trigger: CAAGAGGGAGCCGGGCGCGGCGGGTACGGACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGTATCCATAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CAA 90 bp | CAGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTCTGTTCCAGGTGGCGTaGGCGCAGGCCCGGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QCQLGVPISPGEQGWWMGLFQVA*AQARRC Trigger: GCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAG...ACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 90 bp | GGAAGACCGCGATCACTCCGTTATGGATACTGTTCCAGGTGGCGTTaGCGCAGGCCCGGCGCTGCTGCGTGCCCCGCTCGTCCGTACCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRPRSLRYGYCSRWR*RRPGAAACPARPYP Trigger: CGGGTACGGACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGTATCCATAACGGAGTGATCGCGGTCTTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTGCGCCCGGCTCCCTCTaGCCCAGGTCACTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QCQLGVPISPGEQGWWMGAPGSL*PRSLRL Trigger: CAGCCTCAGTGACCTGGGCAAGAGGGAGCCGGGCGC...ACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS GCA 90 bp | AGCGCGTCCTCCAGCTTCACGCTGAGGGTGATGGTGTTCCGGAAATaGAGCAGGGCGAGCTGGCGCACCGACGGCTCCTTGCCCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SASSSFTLRVMVFRK*SRASWRTDGSLPCT Trigger: TGTGCAGGGCAAGGAGCCGTCGGTGCGCCAGCTCGCCCTGCTGCATTTCCGGAACACCATCACCCTCAGCGTGAAGCTGGAGGACGCGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS CCA 90 bp | CGGAAGGTCCCCGAAGGGCCCTGGCCAGGCGTGTCCACAAAGCCCTaGGGCTCCGGACAAGATGTCATCTCGGAGACTGAGTGTCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RKVPEGPWPGVSTKP*GSGQDVISETECLR Trigger: CCGCAGACACTCAGTCTCCGAGATGACATCTTGTCCGGAGCCCCAGGGCTTTGTGGACACGCCTGGCCAGGGCCCTTCGGGGACCTTCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTGCGCCCGGCTCCCTCTaGCCCAGGTCACTGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CQLGVPISPGEQGWWMGFAPGSL*PRSLRL Trigger: CAGCCTCAGTGACCTGGGCAAGAGGGAGCCGGGCGC...AAAACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS CCA 90 bp | GTCTTCAGCAGCTGCCGGACGCCCTCGTTGAGGATGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGCTGGAAGACCGCGATCACTCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VFSSCRTPSLRMKSS*SGSPLRWKTAITPL Trigger: TAACGGAGTGATCGCGGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCATCCTCAACGAGGGCGTCCGGCAGCTGCTGAAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CAA 90 bp | GGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTAAGTGTGGGCACCAACTGTTCCAGGTGGCGTaGGCGCAGGCCCGGCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GIGRARWFHIFLGKCGHQLFQVA*AQARRC Trigger: GCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAG...TTGGTGCCCACACTTACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS TCA 90 bp | GTCCACAAAGCCCTGGGGCTCCGGACAAGATGTCATCTCGGAGACTaGGTGTCTGCGGATGCTCGTGCCGCTGGCTGCTGTGCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VHKALGLRTRCHLGD*VSADARAAGCCAFC Trigger: GCAGAAGGCACAGCAGCCAGCGGCACGAGCATCCGCAGACACTCAGTCTCCGAGATGACATCTTGTCCGGAGCCCCAGGGCTTTGTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS GCA 90 bp | GGGGCTCCGGACAAGATGTCATCTCGGAGACTGAGTGTCTGCGGATaGTCGTGCCGCTGGCTGCTGTGCCTTCTGCTTCATGCTCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GAPDKMSSRRLSVCG*SCRWLLCLLLHARP Trigger: TGGCCGAGCATGAAGCAGAAGGCACAGCAGCCAGCGGCACGAGCATCCGCAGACACTCAGTCTCCGAGATGACATCTTGTCCGGAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGCCAACTGGGGGTCCCAATCAGTCCGGGTGAGCAGGGGTGGTGGATGGGTCGCACCACTGGGTTCTaGGCTAGGATATCCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QCQLGVPISPGEQGWWMGRTTGF*ARISPE Trigger: CTCTGGGGATATCCTAGCCAAGAACCCAGTGGTGCG...ACCCATCCACCACCCCTGCTCACCCGGACTGATTGGGACCCCCAGTTGGCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGGCTGGGCTGGCATAGGCAGAGCCCGCTGGTTTCACATTTTCCTGGGTGCCCTGAGTGGGGTGTaGGAGAAGACCGGAAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPGWAGIGRARWFHIFLGALSGV*EKTGRS Trigger: GGACCTTCCGGTCTTCTCCAACACCCCACTCAGGGC...ACCCAGGAAAATGTGAAACCAGCGGGCTCTGCCTATGCCAGCCCAGCCTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
||
| CDS CCA 90 bp | CCCTCGTTGAGGATGAAGAGCTCCTGGTCGGGCAGCCCCTTGCGCTaGAAGACCGCGATCACTCCGTTATGGATACTGTTCCAGGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: PSLRMKSSWSGSPLR*KTAITPLWILFQVA Trigger: CGCCACCTGGAACAGTATCCATAACGGAGTGATCGCGGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCATCCTCAACGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CAA 90 bp | GTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTCCAACAGACTGGGAGTATAAAGTGGTCGGGCAGCCCCTaGCGCTGGAAGACCGCGATC | + |
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Preference number: 5 (lower is better) Translates to: VRVSRGGGWVFQQTGSIKWSGSP*RWKTAI Trigger: GATCGCGGTCTTCCAGCGCAAGGGGCTGCCCGACCA...CTTTATACTCCCAGTCTGTTGGAAAACCCATCCACCACCCCTGCTCACCCGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CAA 90 bp | GAGGCAGTGACGGGGGCTGGCAAGAGTAACAAGTCTCTCTCTCACACACACACATGCCGGACGCCCTCGTaGAGGATGAAGAGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: EAVTGAGKSNKSLSHTHTCRTPS*RMKSSW Trigger: CCAGGAGCTCTTCATCCTCAACGAGGGCGTCCGGCA...TGTGTGTGTGTGAGAGAGAGACTTGTTACTCTTGCCAGCCCCCGTCACTGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CAA 90 bp | GTCCGGGTGAGCAGGGGTGGTGGATGGGTTTTCCAACAGACTGGGAGTATAAAGCGCACCACTGGGTTCTaGGCTAGGATATCCCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: VRVSRGGGWVFQQTGSIKRTTGF*ARISPE Trigger: CTCTGGGGATATCCTAGCCAAGAACCCAGTGGTGCG...CTTTATACTCCCAGTCTGTTGGAAAACCCATCCACCACCCCTGCTCACCCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS TCA 90 bp | CCTCAAAGTCAGACACACTGGAGCGACTTCCCCGCCCAAAGTCAATaGATATCCCTTCCGAGTCTGAGTCCGCGGACTCCAGGATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: PQSQTHWSDFPAQSQ*ISLPSLSPRTPGSG Trigger: ACCAGATCCTGGAGTCCGCGGACTCAGACTCGGAAGGGATATTCATTGACTTTGGGCGGGGAAGTCGCTCCAGTGTGTCTGACTTTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS-3UTR CAA 90 bp | ATTTATTTCATGCCTTCCTATTTTGTGGCCACCCAGAGCAGAGGGAGGCAGGCAGCCCTGAGTGGGGTGTaGGAGAAGACCGGAAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: IYFMPSYFVATQSRGRQAALSGV*EKTGRS Trigger: GGACCTTCCGGTCTTCTCCAACACCCCACTCAGGGC...TGCCTGCCTCCCTCTGCTCTGGGTGGCCACAAAATAGGAAGGCATGAAATAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS TCA 90 bp | GGTTGGCAGCACATCACTGAAGAAGAAATCCCAGGTCTCCGCCAATaGGTCCAGCAGCTTCTGTCCTTCGTAGAAGCGAATCTTGTCACG | + |
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Preference number: 5 (lower is better) Translates to: GWQHITEEEIPGLRQ*VQQLLSFVEANLVT Trigger: CGTGACAAGATTCGCTTCTACGAAGGACAGAAGCTGCTGGACTCATTGGCGGAGACCTGGGATTTCTTCTTCAGTGATGTGCTGCCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 90 bp | TACAGGAATGGGTACAAGGTCCTTCATTGGAATAGAGACCATAGGTaGCCAGGTACGGCGACACCACCTTCTGAATCAGTGTCTCGAGGC | + |
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Preference number: 5 (lower is better) Translates to: YRNGYKVLHWNRDHR*PGTATPPSESVSRG Trigger: GCCTCGAGACACTGATTCAGAAGGTGGTGTCGCCGTACCTGGGCACCTATGGTCTCTATTCCAATGAAGGACCTTGTACCCATTCCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 90 bp | GGAATCGTTTCTCGAGGATACAGGAATGGGTACAAGGTCCTTCATTaGAATAGAGACCATAGGTGCCCAGGTACGGCGACACCACCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GIVSRGYRNGYKVLH*NRDHRCPGTATPPS Trigger: AGAAGGTGGTGTCGCCGTACCTGGGCACCTATGGTCTCTATTCCAATGAAGGACCTTGTACCCATTCCTGTATCCTCGAGAAACGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 72 bp | CTGTTCCAGGTGGCGTTGGCGCAGGCCCGGCGCTGCTaGGTGCCCCGCTCGTCCGTACCCGCCGCGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: LFQVALAQARRC*VPRSSVPAAPG Trigger: GCCGGGCGCGGCGGGTACGGACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 72 bp | ATACTGTTCCAGGTGGCGTTGGCGCAGGCCCGGCGCTaGTGCGTGCCCCGCTCGTCCGTACCCGCCGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: ILFQVALAQARR*CVPRSSVPAAP Trigger: GGGCGCGGCGGGTACGGACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGTAT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CAA 90 bp | TGCTGCGTGCCCCGCTCGTCCGTACCCGCCGCGCCCGGCTCCCTCTaGCCCAGGTCACTGAGGCTGGGCGAACTCATGAACTTCAACCTG | + |
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Preference number: 6 (lower is better) Translates to: CCVPRSSVPAAPGSL*PRSLRLGELMNFNL Trigger: CAGGTTGAAGTTCATGAGTTCGCCCAGCCTCAGTGACCTGGGCAAGAGGGAGCCGGGCGCGGCGGGTACGGACGAGCGGGGCACGCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065499.5 |
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| CDS CCA 72 bp | GGTGTTGGAGAAGACCGGAAGGTCCCCGAAGGGCCCTaGCCAGGCGTGTCCACAAAGCCCTGGGGCTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: GVGEDRKVPEGP*PGVSTKPWGSG Trigger: TCCGGAGCCCCAGGGCTTTGTGGACACGCCTGGCCAGGGCCCTTCGGGGACCTTCCGGTCTTCTCCAACACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CAA 90 bp | TGGAAGACCGCGATCACTCCGTTATGGATACTGTTCCAGGTGGCGTaGGCGCAGGCCCGGCGCTGCTGCGTGCCCCGCTCGTCCGTACCC | + |
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Preference number: 6 (lower is better) Translates to: WKTAITPLWILFQVA*AQARRCCVPRSSVP Trigger: GGGTACGGACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGTATCCATAACGGAGTGATCGCGGTCTTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 72 bp | CGATCACTCCGTTATGGATACTGTTCCAGGTGGCGTTaGCGCAGGCCCGGCGCTGCTGCGTGCCCCGCTCGT | + |
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Preference number: 6 (lower is better) Translates to: RSLRYGYCSRWR*RRPGAAACPAR Trigger: ACGAGCGGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGTATCCATAACGGAGTGATCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 72 bp | AGACCGCGATCACTCCGTTATGGATACTGTTCCAGGTaGCGTTGGCGCAGGCCCGGCGCTGCTGCGTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RPRSLRYGYCSR*RWRRPGAAACP Trigger: GGGGCACGCAGCAGCGCCGGGCCTGCGCCAACGCCACCTGGAACAGTATCCATAACGGAGTGATCGCGGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 72 bp | AGCTGCCGGACGCCCTCGTTGAGGATGAAGAGCTCCTaGTCGGGCAGCCCCTTGCGCTGGAAGACCGCGATC | + |
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Preference number: 6 (lower is better) Translates to: SCRTPSLRMKSS*SGSPLRWKTAI Trigger: GATCGCGGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCATCCTCAACGAGGGCGTCCGGCAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 72 bp | CATGTACCCCCTGCAGTACCAGCAGCATCTGTGCGATaGCAGGGGGAACACGCGCGTGAGAGCGGGCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: HVPPAVPAASVR*QGEHARESGPA Trigger: CGCTGGCCCGCTCTCACGCGCGTGTTCCCCCTGCCATCGCACAGATGCTGCTGGTACTGCAGGGGGTACATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CAA 72 bp | CCCAGCTCCGTCTTCAGCAGCTGCCGGACGCCCTCGTaGAGGATGAAGAGCTCCTGGTCGGGCAGCCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PSSVFSSCRTPS*RMKSSWSGSPL Trigger: CAAGGGGCTGCCCGACCAGGAGCTCTTCATCCTCAACGAGGGCGTCCGGCAGCTGCTGAAGACGGAGCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS TCA 72 bp | GCCCTGGGGCTCCGGACAAGATGTCATCTCGGAGACTaGGTGTCTGCGGATGCTCGTGCCGCTGGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ALGLRTRCHLGD*VSADARAAGCC Trigger: ACAGCAGCCAGCGGCACGAGCATCCGCAGACACTCAGTCTCCGAGATGACATCTTGTCCGGAGCCCCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 72 bp | TCCAGCTTCACGCTGAGGGTGATGGTGTTCCGGAAATaGAGCAGGGCGAGCTGGCGCACCGACGGCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSFTLRVMVFRK*SRASWRTDGSL Trigger: CAAGGAGCCGTCGGTGCGCCAGCTCGCCCTGCTGCATTTCCGGAACACCATCACCCTCAGCGTGAAGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 72 bp | TCTGCGGATGCTCGTGCCGCTGGCTGCTGTGCCTTCTaGTTCATGCTCGGCCACAGGATTGAGCAGGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: SADARAAGCCAF*FMLGHRIEQGS Trigger: ACTCCCCTGCTCAATCCTGTGGCCGAGCATGAAGCAGAAGGCACAGCAGCCAGCGGCACGAGCATCCGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 72 bp | TCTCGGAGACTGAGTGTCTGCGGATGCTCGTGCCGCTaGCTGCTGTGCCTTCTGCTTCATGCTCGGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: SRRLSVCGCSCR*LLCLLLHARPQ Trigger: CTGTGGCCGAGCATGAAGCAGAAGGCACAGCAGCCAGCGGCACGAGCATCCGCAGACACTCAGTCTCCGAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CAA 90 bp | CGGACGCCCTCGTTGAGGATGAAGAGCTCCTGGTCGGGCAGCCCCTaGCGCTGGAAGACCGCGATCACTCCGTTATGGATACTGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RTPSLRMKSSWSGSP*RWKTAITPLWILFQ Trigger: CTGGAACAGTATCCATAACGGAGTGATCGCGGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCATCCTCAACGAGGGCGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 72 bp | GCTCCGGACAAGATGTCATCTCGGAGACTGAGTGTCTaGGGATGCTCGTGCCGCTGGCTGCTGTGCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: APDKMSSRRLSV*GCSCRWLLCLL Trigger: CAGAAGGCACAGCAGCCAGCGGCACGAGCATCCGCAGACACTCAGTCTCCGAGATGACATCTTGTCCGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 72 bp | AGGATGAAGAGCTCCTGGTCGGGCAGCCCCTTGCGCTaGAAGACCGCGATCACTCCGTTATGGATACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RMKSSWSGSPLR*KTAITPLWILF Trigger: GAACAGTATCCATAACGGAGTGATCGCGGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 72 bp | GAGTGTTGTAGCTTTTGGAGCGCACCACTGGGTTCTTaGCTAGGATATCCCCAGAGCGGGAGCGGCGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: ECCSFWSAPLGS*LGYPQSGSGVG Trigger: TCCTACGCCGCTCCCGCTCTGGGGATATCCTAGCCAAGAACCCAGTGGTGCGCTCCAAAAGCTACAACACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CAA 72 bp | TCGTTGAGGATGAAGAGCTCCTGGTCGGGCAGCCCCTaGCGCTGGAAGACCGCGATCACTCCGTTATGGATA | + |
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Preference number: 6 (lower is better) Translates to: SLRMKSSWSGSP*RWKTAITPLWI Trigger: TATCCATAACGGAGTGATCGCGGTCTTCCAGCGCAAGGGGCTGCCCGACCAGGAGCTCTTCATCCTCAACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS TCA 72 bp | CAGACACACTGGAGCGACTTCCCCGCCCAAAGTCAATaGATATCCCTTCCGAGTCTGAGTCCGCGGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: QTHWSDFPAQSQ*ISLPSLSPRTP Trigger: TGGAGTCCGCGGACTCAGACTCGGAAGGGATATTCATTGACTTTGGGCGGGGAAGTCGCTCCAGTGTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 72 bp | GACAAGATGTCATCTCGGAGACTGAGTGTCTGCGGATaGTCGTGCCGCTGGCTGCTGTGCCTTCTGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: DKMSSRRLSVCG*SCRWLLCLLLH Trigger: ATGAAGCAGAAGGCACAGCAGCCAGCGGCACGAGCATCCGCAGACACTCAGTCTCCGAGATGACATCTTGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 72 bp | GTGTCTCGAGGCGCAGATAGTCTTCAGTCACACCCCTaGACTCATGTACCCCCTGCAGTACCAGCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: VSRGADSLQSHP*THVPPAVPAAS Trigger: AGATGCTGCTGGTACTGCAGGGGGTACATGAGTCCAGGGGTGTGACTGAAGACTATCTGCGCCTCGAGACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS TCA 72 bp | TCCCCGCCCAAAGTCAATGAATATCCCTTCCGAGTCTaGGTCCGCGGACTCCAGGATCTGGTCCACAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SPPKVNEYPFRV*VRGLQDLVHKS Trigger: ACTCTTGTGGACCAGATCCTGGAGTCCGCGGACTCAGACTCGGAAGGGATATTCATTGACTTTGGGCGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS GCA 72 bp | GGGTACAAGGTCCTTCATTGGAATAGAGACCATAGGTaGCCAGGTACGGCGACACCACCTTCTGAATCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GYKVLHWNRDHR*PGTATPPSESV Trigger: CACTGATTCAGAAGGTGGTGTCGCCGTACCTGGGCACCTATGGTCTCTATTCCAATGAAGGACCTTGTACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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| CDS CCA 72 bp | TCTCGAGGATACAGGAATGGGTACAAGGTCCTTCATTaGAATAGAGACCATAGGTGCCCAGGTACGGCGACA | + |
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Preference number: 6 (lower is better) Translates to: SRGYRNGYKVLH*NRDHRCPGTAT Trigger: TGTCGCCGTACCTGGGCACCTATGGTCTCTATTCCAATGAAGGACCTTGTACCCATTCCTGTATCCTCGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065499.5 ENSMUST00000171460.8 |
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