Pregenerated sensors for PRR36 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064125Ensembl transcript IDs: ENSMUST00000168386.9, ENSMUST00000175906.2, ENSMUST00000177491.8
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCCCACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATaGTGGGCGTTTCCGCCTCAGCCCAAGCAAGTTAGTTCCCATAGG | + |
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Preference number: 1 (lower is better) Translates to: LPTSPLTQSSTPARE*WAFPPQPKQVSSHR Trigger: CCTATGGGAACTAACTTGCTTGGGCTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR CCA 90 bp | CCCACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTaGGCGTTTCCGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: PTSPLTQSSTPAREW*AFPPQPKQVSSHRH Trigger: ATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR GCA 90 bp | GAGTTCATCTTTCAGGCCCAACTCTCAAGCATGGAAGAGAAGGGGTaGACACAGGACAACGGTGCTGTAGCAAGGGGTACCCAGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: EFIFQAQLSSMEEKG*TQDNGAVARGTQES Trigger: GCTTTCCTGGGTACCCCTTGCTACAGCACCGTTGTCCTGTGTGCACCCCTTCTCTTCCATGCTTGAGAGTTGGGCCTGAAAGATGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR GCA 90 bp | TTCTGGCTCACAGTTCAGGGTATCATCTACCACTGGGGAAGTCAATaGAATAGGAGCTGGAAGCAGCCGGTCTCTGAGCATCCACAATGG | + |
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Preference number: 1 (lower is better) Translates to: FWLTVQGIIYHWGSQ*NRSWKQPVSEHPQW Trigger: CCATTGTGGATGCTCAGAGACCGGCTGCTTCCAGCTCCTATTGCATTGACTTCCCCAGTGGTAGATGATACCCTGAACTGTGAGCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR GCA 90 bp | CATTCAGCATGTAAACTATCGTCCACTGAACATAAGGTGTGGTATTaGTCCTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: HSACKLSSTEHKVWY*SLEKGCGLGKIGEA Trigger: AGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAGGAGCAATACCACACCTTATGTTCAGTGGACGATAGTTTACATGCTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR-3UTR CCA 90 bp | CACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCCCCAACTCTCAAGCATaGAAGAGAAGGGGTGCACAC | + |
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Preference number: 2 (lower is better) Translates to: HLSADTIQYSSQGMVGVSPNSQA*KRRGAH Trigger: GTGTGCACCCCTTCTCTTCCATGCTTGAGAGTTGGG...GGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR-3UTR CCA 90 bp | TCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGTGGTATGTGTATGGTaGACAGGAATGGGATCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SADTIQYSSQGMVGVSASVVCVW*TGMGSG Trigger: GCCAGATCCCATTCCTGTCCACCATACACATACCAC...TGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR-3UTR CCA 90 bp | CACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCAAAGTGGTATGTGTATaGTGGACAGGAATGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: HLSADTIQYSSQGMVGVSKVVCV*WTGMGS Trigger: AGATCCCATTCCTGTCCACCATACACATACCACTTT...GGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCATGGAAGAGAAGGGGTaGACACAGGACAACGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QGLTILLLEFIFQAQLSSMEEKG*TQDNGA Trigger: AGCACCGTTGTCCTGTGTGCACCCCTTCTCTTCCAT...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR CAA 90 bp | GCATGTAAACTATCGTCCACTGAACATAAGGTGTGGTATTGCTCCTaGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATG | + |
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Preference number: 2 (lower is better) Translates to: ACKLSSTEHKVWYCS*EKGCGLGKIGEAQM Trigger: CATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAGGAGCAATACCACACCTTATGTTCAGTGGACGATAGTTTACATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR TCA 72 bp | GGGGGACTGAAGGCATGCTGCTGCCCACCTCTCCGCTaGCACAATCCAGTACTCCAGCCAGGGAATGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: GGLKACCCPPLR*HNPVLQPGNGG Trigger: CCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTGGGCAGCAGCATGCCTTCAGTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR-3UTR CAA 90 bp | TCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGTGTGGTATTGCTCCTaGGAGAAGGGGTGTGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: SADTIQYSSQGMVGVSASVWYCS*EKGCGL Trigger: TAAGCCACACCCCTTCTCCAAGGAGCAATACCACAC...TGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR CCA 72 bp | TCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATaGTGGGCGTTTCCGCCTCAGCCCAAGCAAGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: SPLTQSSTPARE*WAFPPQPKQVS Trigger: ACTAACTTGCTTGGGCTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR CCA 72 bp | ATCATCTACCACTGGGGAAGTCAATGCAATAGGAGCTaGAAGCAGCCGGTCTCTGAGCATCCACAATGGGGG | + |
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Preference number: 3 (lower is better) Translates to: IIYHWGSQCNRS*KQPVSEHPQWG Trigger: CCCCCATTGTGGATGCTCAGAGACCGGCTGCTTCCAGCTCCTATTGCATTGACTTCCCCAGTGGTAGATGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR GCA 72 bp | AAGCATGGAAGAGAAGGGGTGCACACAGGACAACGGTaGTGTAGCAAGGGGTACCCAGGAAAGCAAACTACT | + |
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Preference number: 3 (lower is better) Translates to: KHGREGVHTGQR*CSKGYPGKQTT Trigger: AGTAGTTTGCTTTCCTGGGTACCCCTTGCTACAGCACCGTTGTCCTGTGTGCACCCCTTCTCTTCCATGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR CCA 72 bp | TACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCATaGAAGAGAAGGGGTGCACACAGGACAACGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: YSSSSFRPNSQA*KRRGAHRTTVL Trigger: CAGCACCGTTGTCCTGTGTGCACCCCTTCTCTTCCATGCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR GCA 72 bp | ACAGTTCAGGGTATCATCTACCACTGGGGAAGTCAATaGAATAGGAGCTGGAAGCAGCCGGTCTCTGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: TVQGIIYHWGSQ*NRSWKQPVSEH Trigger: ATGCTCAGAGACCGGCTGCTTCCAGCTCCTATTGCATTGACTTCCCCAGTGGTAGATGATACCCTGAACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR CCA 72 bp | AAAACCAATCCAGCCAAGTGTCACAGGAAGTGGGAGTaGAGACTAAGACAAAAGAGGCGTAACCAGAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: KTNPAKCHRKWE*RLRQKRRNQKG Trigger: ACCCTTCTGGTTACGCCTCTTTTGTCTTAGTCTCCACTCCCACTTCCTGTGACACTTGGCTGGATTGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR CCA 72 bp | TCAGCATGTAAACTATCGTCCACTGAACATAAGGTGTaGTATTGCTCCTTGGAGAAGGGGTGTGGCTTAGGC | + |
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Preference number: 3 (lower is better) Translates to: SACKLSSTEHKV*YCSLEKGCGLG Trigger: GCCTAAGCCACACCCCTTCTCCAAGGAGCAATACCACACCTTATGTTCAGTGGACGATAGTTTACATGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| 3UTR GCA 72 bp | TGTAAACTATCGTCCACTGAACATAAGGTGTGGTATTaGTCCTTGGAGAAGGGGTGTGGCTTAGGCAAAATA | + |
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Preference number: 3 (lower is better) Translates to: CKLSSTEHKVWY*SLEKGCGLGKI Trigger: TATTTTGCCTAAGCCACACCCCTTCTCCAAGGAGCAATACCACACCTTATGTTCAGTGGACGATAGTTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR TCA 90 bp | ACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGCCCAAGCCCTGGACCGACGGGTaGTGGCAGGGGAGGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: TQSSTPAREWWAFPPQPKPWTDG*WQGRGL Trigger: GAGCCCCCTCCCCTGCCATCACCCGTCGGTCCAGGG...CTTGGGCTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGCTCGAAGGGCAGCAGTaGTCACAGGGGGAGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: PLTQSSTPAREWWAFPPQLEGQQ*SQGEEV Trigger: GACCTCCTCCCCCTGTGACCACTGCTGCCCTTCGAG...CTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | ACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGCCCAAGGACCCCGGAGCGGGATaGGGAGAGCTGAGGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TQSSTPAREWWAFPPQPKDPGAG*GELRSS Trigger: GCTACTCCTCAGCTCTCCCCATCCCGCTCCGGGGTC...CTTGGGCTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGTCCTTTCCCAGAAGCTaGGGGCCTGTTGGCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: PLTQSSTPAREWWAFPPQSFPRS*GPVGWA Trigger: AGCCCAGCCAACAGGCCCCCAGCTTCTGGGAAAGGA...CTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | GGGACTGAAGGCATGCTGCTGCCCACCTCTCCGCTGACACAATCCAGTACTCCATCCTGGCTGCCTCGGTaGTCAGAGGACGCTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GTEGMLLPTSPLTQSSTPSWLPR*SEDAVW Trigger: CCAGACAGCGTCCTCTGACCACCGAGGCAGCCAGGA...TGGAGTACTGGATTGTGTCAGCGGAGAGGTGGGCAGCAGCATGCCTTCAGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | TCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGGGAAAAGCCAGAGGTaGGGTTTGCGGAGGGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SADTIQYSSQGMVGVSASGKSQR*GLRRGR Trigger: ACGCCCCCTCCGCAAACCCCACCTCTGGCTTTTCCC...TGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | ACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGCCCAAGAACCTGGGCCAGCAGTaGGAGGCCATGGCAGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TQSSTPAREWWAFPPQPKNLGQQ*EAMAGE Trigger: TTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTT...CTTGGGCTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR GCA 90 bp | CCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGCGTGAGACCGGCTTTTaGAGGCTGCCACCAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: PLTQSSTPAREWWAFPPQRETGF*RLPPAT Trigger: TGTTGCTGGTGGCAGCCTGCAAAAGCCGGTCTCACG...CTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGACTGTGGTCTGGGTTaGGTGCAGAGCTTGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: HLSADTIQYSSQGMVGVSDCGLG*VQSLLP Trigger: GGGCAGCAAGCTCTGCACCCAACCCAGACCACAGTC...GGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | ACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGCCCAAGTGTGGCTGTGGCCAATaGGGAGGAGGGAGACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TQSSTPAREWWAFPPQPKCGCGQ*GGGRLQ Trigger: CTGCAGTCTCCCTCCTCCCCATTGGCCACAGCCACA...CTTGGGCTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGGGAGGCCACATCATCTaGGGAGAAGCTGGTGACCGA | + |
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Preference number: 4 (lower is better) Translates to: PLTQSSTPAREWWAFPPQGGHII*GEAGDR Trigger: TCGGTCACCAGCTTCTCCCCAGATGATGTGGCCTCC...CTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGAGTCCAGTCACCCTGTaGGGAGGCCACATCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: PLTQSSTPAREWWAFPPQSPVTL*GGHIIW Trigger: CCAGATGATGTGGCCTCCCCACAGGGTGACTGGACT...CTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR TCA 90 bp | CACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCACTGGGAGCTGGTTaGGGAAGTCCCACCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: HLSADTIQYSSQGMVGVSALGAG*GSPTSV Trigger: TACAGAGGTGGGACTTCCTCAACCAGCTCCCAGTGC...GGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR TCA 90 bp | TCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAATGGGGCACTGCCTGTaGAGAGGCTTGTGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SADTIQYSSQGMVGVSASMGHCL*RGLWLE Trigger: CTCCAACCACAAGCCTCTTCACAGGCAGTGCCCCAT...TGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCTCAGAGGACGCTGTCTaGCACTGGGAGCTGGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: HLSADTIQYSSQGMVGVSSEDAV*HWELVE Trigger: CTCAACCAGCTCCCAGTGCCAGACAGCGTCCTCTGA...GGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR GCA 90 bp | GGGACTGAAGGCATGCTGCTGCCCACCTCTCCGCTGACACAATCCAGTACTCCATGCTCCTGCACAGTCTaGAGCAGTCACCTTCGCACT | + |
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Preference number: 4 (lower is better) Translates to: GTEGMLLPTSPLTQSSTPCSCTV*SSHLRT Trigger: AGTGCGAAGGTGACTGCTGCAGACTGTGCAGGAGCA...TGGAGTACTGGATTGTGTCAGCGGAGAGGTGGGCAGCAGCATGCCTTCAGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | ACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGCCCAAGTCTTCCTTGGGACTGTaGTCTGGGTTGGGTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TQSSTPAREWWAFPPQPKSSLGL*SGLGAE Trigger: CTCTGCACCCAACCCAGACCACAGTCCCAAGGAAGA...CTTGGGCTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGTGTCCAGACTGTGAATaGGGCACTGCCTGTGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: PLTQSSTPAREWWAFPPQCPDCE*GTACEE Trigger: CTCTTCACAGGCAGTGCCCCATTCACAGTCTGGACA...CTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCTGGCCCGGAAAGGAGTaGAGAGAGGCAACTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: HLSADTIQYSSQGMVGVSWPGKE*REATEK Trigger: CTTCTCAGTTGCCTCTCTCCACTCCTTTCCGGGCCA...GGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTCCCCCGGAGGGAAAGTaGTCAGGGGAGAAGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFPPEGK*SGEKEG Trigger: CCCCTCCTTCTCCCCTGACCACTTTCCCTCCGGGGG...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR TCA 90 bp | CACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGAAGTGGGCAAAGTCTaGGAAAGTGGGAGCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: HLSADTIQYSSQGMVGVSEVGKV*ESGSLR Trigger: TCTGAGGCTCCCACTTTCTCAGACTTTGCCCACTTC...GGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR GCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTCCCAGGTTTCCTGGCTaGCTCGGTGGTCAGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFPRFPG*LGGQRT Trigger: CGTCCTCTGACCACCGAGGCAGCCAGGAAACCTGGG...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR GCA 90 bp | TCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGTATGTAACAGGAGGTaGCTGCAAAGAAGGCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SADTIQYSSQGMVGVSASVCNRR*LQRRRG Trigger: CCCTCGCCTTCTTTGCAGGCACCTCCTGTTACATAC...TGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | TCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCATGCTTTGCTGGTCTGTaGAAGAGCGGCTTTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SADTIQYSSQGMVGVSASCFAGL*KSGFAG Trigger: ACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCA...TGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTTCCCACCTCTGTAGCTaGAGCCCTGGACCGACGGGT | + |
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Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFSHLCS*SPGPTG Trigger: ACCCGTCGGTCCAGGGCTCCAGCTACAGAGGTGGGA...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CCA 90 bp | CACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCATTCTGCGGGGAAATTaGCGGGGAAGGAAGGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: HLSADTIQYSSQGMVGVSILRGN*RGRKEL Trigger: CAACTCCTTCCTTCCCCGCCAATTTCCCCGCAGAAT...GGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR TCA 90 bp | GGTGGCAGAGCGCATAGGTGCCAGCATGTAAACCATTCAGCATGTAAACTATCGCGGGATGGGGAGAGCTaGGGAGTAGCACTGGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GGRAHRCQHVNHSACKLSRDGES*GVALGI Trigger: GATCCCCAGTGCTACTCCTCAGCTCTCCCCATCCCG...CGATAGTTTACATGCTGAATGGTTTACATGCTGGCACCTATGCGCTCTGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR TCA 90 bp | GGGACTGAAGGCATGCTGCTGCCCACCTCTCCGCTGACACAATCCAGTACTCCAGCAACTGAGAAGACGTaGCAAGGGAAGTGGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTEGMLLPTSPLTQSSTPATEKT*QGKWAN Trigger: ATTTGCCCACTTCCCTTGTCACGTCTTCTCAGTTGC...TGGAGTACTGGATTGTGTCAGCGGAGAGGTGGGCAGCAGCATGCCTTCAGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR TCA 90 bp | ACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGCCCAAGCAACAAAGAGGCCTGTaGAGTGGGCAAAGTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQSSTPAREWWAFPPQPKQQRGL*SGQSLR Trigger: TCTCAGACTTTGCCCACTTCACAGGCCTCTTTGTTG...CTTGGGCTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATGGAAGGCCAGTGGAAGAGCGGCTTTaGAGACGCCTGGGGCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGEGVWLRQNRRSSNGRPVEERL*RRLGLA Trigger: AGCGAGCCCCAGGCGTCTGCAAAGCCGCTCTTCCAC...TGGCCTTCCATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTACTACTGCTGTGACCTaGCAGGTCCGGGCCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFTTAVT*QVRATQ Trigger: CTGAGTGGCCCGGACCTGGCAGGTCACAGCAGTAGT...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CACCTCTCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCCAGATTCGTAGATGGTaGACAGGCCATCAGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLSADTIQYSSQGMVGVSQIRRW*TGHQRN Trigger: GTTCCTCTGATGGCCTGTGCACCATCTACGAATCTG...GGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGAGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | TCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGAAGAGCTGCTTTGCTaGTCTGTGGAAGAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SADTIQYSSQGMVGVSASEELLC*SVEELL Trigger: AAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTC...TGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTCAACAGGGCCTGGTCTaGCAATCCCACTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFQQGLV*QSHCWH Trigger: GTGCCAGCAGTGGGATTGCCAGACCAGGCCCTGTTG...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATGGAAGGCCAGCCGCGGAGCTCCTCTaGTGTGCTCGTGGCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: LGEGVWLRQNRRSSNGRPAAELL*CARGTT Trigger: AGTAGTGCCACGAGCACACCAGAGGAGCTCCGCGGC...TGGCCTTCCATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR TCA 90 bp | AATCCAGCCAAGTGTCACAGGAAGTGGGAGTGGAGACTAAGACAAAAGAGGCGTAGCTCTCGGTGGGGGTaGGTCAGAGGCCTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NPAKCHRKWEWRLRQKRRSSRWG*VRGLFS Trigger: ACTGAAGAGGCCTCTGACTCACCCCCACCGAGAGCT...ACGCCTCTTTTGTCTTAGTCTCCACTCCCACTTCCTGTGACACTTGGCTGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | AATCCAGCCAAGTGTCACAGGAAGTGGGAGTGGAGACTAAGACAAAAGAGGCGTTTGAGCTGCGAGGTATaGGCAGGAGCCCGTGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NPAKCHRKWEWRLRQKRRLSCEV*AGARGV Trigger: AACCCCACGGGCTCCTGCGCATACCTCGCAGCTCAA...ACGCCTCTTTTGTCTTAGTCTCCACTCCCACTTCCTGTGACACTTGGCTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTGACGCTGTCTGGCACTaGGAGCTGGTTGAGGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFDAVWH*ELVEEV Trigger: GACTTCCTCAACCAGCTCCCAGTGCCAGACAGCGTC...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | AATCCAGCCAAGTGTCACAGGAAGTGGGAGTGGAGACTAAGACAAAAGAGGCGTTGCTCCCAGGTTTCCTaGCTGCCTCGGTGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NPAKCHRKWEWRLRQKRRCSQVS*LPRWSE Trigger: CTCTGACCACCGAGGCAGCCAGGAAACCTGGGAGCA...ACGCCTCTTTTGTCTTAGTCTCCACTCCCACTTCCTGTGACACTTGGCTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATGGAAGGCCATGTGATAGGGACATCTaGACCCGGGGTTGGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGEGVWLRQNRRSSNGRPCDRDI*TRGWGS Trigger: CGACCCCCAACCCCGGGTCCAGATGTCCCTATCACA...TGGCCTTCCATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATGGAAGGCCAAAGGGGAGGGGGCGATaGAGAGATTACAGCTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGEGVWLRQNRRSSNGRPKGRGR*RDYSSR Trigger: CCGAGAGCTGTAATCTCTTCATCGCCCCCTCCCCTT...TGGCCTTCCATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCCTGAGCCTCCTGAACTaGCTTCGCAGCCCACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSLSLLN*LRSPQL Trigger: CAGCTGTGGGCTGCGAAGGCAGTTCAGGAGGCTCAG...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGCAGAGCGCATAGGTGCCAGCATGTAAACCATTCAGCATGTAAACTATCGAGGGGGCTCCTGAGGTaGGCCCTAAAGAATCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGRAHRCQHVNHSACKLSRGLLR*ALKNLQ Trigger: CTGCAGATTCTTTAGGGCCCACCTCAGGAGCCCCCT...CGATAGTTTACATGCTGAATGGTTTACATGCTGGCACCTATGCGCTCTGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATGGAAGGCCATCTGGCACTGGGAGCTaGTTGAGGAAGTCCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGEGVWLRQNRRSSNGRPSGTGS*LRKSHL Trigger: GAGGTGGGACTTCCTCAACCAGCTCCCAGTGCCAGA...TGGCCTTCCATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCGCGTCTCCTAAAGGCTaGGCTCAGCTCCGTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSASPKG*AQLRGT Trigger: AGTGCCACGGAGCTGAGCCCAGCCTTTAGGAGACGC...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTCAGGTGAGAAAGGCATaGCCGAGAGAGTCTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFQVRKA*PRESPE Trigger: CTCAGGAGACTCTCTCGGCCATGCCTTTCTCACCTG...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGCAGAGCGCATAGGTGCCAGCATGTAAACCATTCAGCATGTAAACTATCGCCAGGGGTGAAAGAGTaGGTGAGCCCAGTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGRAHRCQHVNHSACKLSPGVKE*VSPVKV Trigger: CACCTTCACTGGGCTCACCCACTCTTTCACCCCTGG...CGATAGTTTACATGCTGAATGGTTTACATGCTGGCACCTATGCGCTCTGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | AATCCAGCCAAGTGTCACAGGAAGTGGGAGTGGAGACTAAGACAAAAGAGGCGTGGAAGAGGTGGAAGCTaGCAGAGGGGGAAAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPAKCHRKWEWRLRQKRRGRGGS*QRGKSQ Trigger: CTGGCTTTTCCCCCTCTGCCAGCTTCCACCTCTTCC...ACGCCTCTTTTGTCTTAGTCTCCACTCCCACTTCCTGTGACACTTGGCTGGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATGGAAGGCCAGGTAGGCAGAGGTGGTaGGATGGAGGTAGACGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGEGVWLRQNRRSSNGRPGRQRW*DGGRRR Trigger: TCTTCGTCTACCTCCATCTCACCACCTCTGCCTACC...TGGCCTTCCATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTGGTCTGTGGAAGAGCTaGTTTGCTGGTCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFGLWKS*FAGLWK Trigger: CTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACC...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCCCTTTCGACTTGAGCTaGGAGGTATGCGCAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSPFDLS*EVCAGA Trigger: GGCTCCTGCGCATACCTCGCAGCTCAAGTCGAAAGG...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATGGAAGGCCAGTAGAGGGGAGGTTCTaGAGAGAAAGAGGCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LGEGVWLRQNRRSSNGRPVEGRF*RERGGG Trigger: ACCTCCGCCTCTTTCTCTGCAGAACCTCCCCTCTAC...TGGCCTTCCATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCGGAGCTCCTCTGGTGTaGTCGTGGCACTACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSGAPLV*SWHYCC Trigger: ACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCC...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTGAGAGGGAGGAAGTGTaGTTTGCGAGGGATCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFEREEV*FARDHL Trigger: CAGATGATCCCTCGCAAACCACACTTCCTCCCTCTC...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCTGTCCAGGGAAGAGGTaGAAGCTGGCAGAGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSCPGKR*KLAEGE Trigger: TTCCCCCTCTGCCAGCTTCCACCTCTTCCCTGGACA...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR TCA 90 bp | GGTGGCAGAGCGCATAGGTGCCAGCATGTAAACCATTCAGCATGTAAACTATCGCAGGTGGAGTGGGCGTaGCTAAAGATGAAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGRAHRCQHVNHSACKLSQVEWA*LKMKQE Trigger: TTCCTGCTTCATCTTTAGTCACGCCCACTCCACCTG...CGATAGTTTACATGCTGAATGGTTTACATGCTGGCACCTATGCGCTCTGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCGTTGGGTGCAGAGCTTaGTGCCCTTTCGACTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSVGCRA*CPFDLS Trigger: GCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAAC...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATGGAAGGCCAGAAGTGGGCAAATTCTaGGGGGAAATTGGCGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGEGVWLRQNRRSSNGRPEVGKF*GEIGGE Trigger: TTCCCCGCCAATTTCCCCGCAGAATTTGCCCACTTC...TGGCCTTCCATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCGGGGAACTCCTGGAGTaGTGCGTACTGCTAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSGELLE*CVLLTV Trigger: CACAGTTAGCAGTACGCAGCACTCCAGGAGTTCCCC...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCCAGTCACCTTCGCACTaGCAGAGCCAGGCATTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSQSPSH*QSQALV Trigger: AACCAATGCCTGGCTCTGGCAGTGCGAAGGTGACTG...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCGGCTTTGCTGGTCTGTaGAAGAGCGGCTTTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSGFAGL*KSGFAD Trigger: GTCTGCAAAGCCGCTCTTCCACAGACCAGCAAAGCC...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCGGCTTTGCTGGTCTGTaGAAGAGCGGCTTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSGFAGL*KSGFAG Trigger: ACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCC...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTGAGACTCAGAAAAGTTaGCCCGGAAAGGAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFETQKS*PGKEWR Trigger: TCTCCACTCCTTTCCGGGCCAACTTTTCTGAGTCTC...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | GGTGGCAGAGCGCATAGGTGCCAGCATGTAAACCATTCAGCATGTAAACTATCGGAGCCAGTAGAGAGTTaGGTGGATAGAGGGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGRAHRCQHVNHSACKLSEPVES*VDRGDK Trigger: CTTGTCCCCTCTATCCACCCAACTCTCTACTGGCTC...CGATAGTTTACATGCTGAATGGTTTACATGCTGGCACCTATGCGCTCTGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCCAAGGCCAGAGAAGGTaGAGTCTGCGGACAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSQGQRR*SLRTGY Trigger: ATACCCTGTCCGCAGACTCCACCTTCTCTGGCCTTG...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | AATCCAGCCAAGTGTCACAGGAAGTGGGAGTGGAGACTAAGACAAAAGAGGCGTAGAGAAGGTGGAGTCTaGGGACAGGGTATTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPAKCHRKWEWRLRQKRRREGGV*GQGIVR Trigger: TCTGACAATACCCTGTCCGCAGACTCCACCTTCTCT...ACGCCTCTTTTGTCTTAGTCTCCACTCCCACTTCCTGTGACACTTGGCTGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCCCTGTGGAAAACATGTaGCTGTGTCCAGGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSPVENM*LCPGKR Trigger: CCTCTTCCCTGGACACAGCCACATGTTTTCCACAGG...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | AATCCAGCCAAGTGTCACAGGAAGTGGGAGTGGAGACTAAGACAAAAGAGGCGTCAAGAGAGGACCCTGTaGAAAACATGTGGCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NPAKCHRKWEWRLRQKRRQERTL*KTCGCV Trigger: GACACAGCCACATGTTTTCCACAGGGTCCTCTCTTG...ACGCCTCTTTTGTCTTAGTCTCCACTCCCACTTCCTGTGACACTTGGCTGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | AATCCAGCCAAGTGTCACAGGAAGTGGGAGTGGAGACTAAGACAAAAGAGGCGTGTGAATAGTGGTCTGTaGAAGAGCTGCTTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPAKCHRKWEWRLRQKRRVNSGL*KSCFAG Trigger: ACCAGCAAAGCAGCTCTTCCACAGACCACTATTCAC...ACGCCTCTTTTGTCTTAGTCTCCACTCCCACTTCCTGTGACACTTGGCTGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCAACTTGACACTACTTATCATGGAGAAGTAACAGATGAAGTCAAGGACAAGCTGGGGGCCTGTTaGCTGGGCTACGAGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCQLDTTYHGEVTDEVKDKLGAC*LGYEDL Trigger: CAGGTCCTCGTAGCCCAGCCAACAGGCCCCCAGCTT...GTCCTTGACTTCATCTGTTACTTCTCCATGATAAGTAGTGTCAAGTTGACAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTAAACTGGAGGAGAAATaGCCAGAAACAGAGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFKLEEK*PETEDL Trigger: AAGATCCTCTGTTTCTGGCCATTTCTCCTCCAGTTT...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGACTCACCATTCTTCTACTCGAGTTCATCTTTCAGGCCCAACTCTCAAGCAAGAGGCCTGTGAAGTaGGCAAAGTCTGAGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLTILLLEFIFQAQLSSKRPVK*AKSEKV Trigger: CACTTTCTCAGACTTTGCCCACTTCACAGGCCTCTT...GCTTGAGAGTTGGGCCTGAAAGATGAACTCGAGTAGAAGAATGGTGAGTCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| 3UTR CAA 72 bp | CTATCGTCCACTGAACATAAGGTGTGGTATTGCTCCTaGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSTEHKVWYCS*EKGCGLGKIGE Trigger: TTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAGGAGCAATACCACACCTTATGTTCAGTGGACGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCAACTTGACACTACTTATCATGGAGAAGTAACAGATGAAGTCAAGGACGGGCTTGTTCTTCCTTaGGACTGTGGTCTGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCQLDTTYHGEVTDEVKDGLVLP*DCGLGW Trigger: CCAACCCAGACCACAGTCCCAAGGAAGAACAAGCCC...GTCCTTGACTTCATCTGTTACTTCTCCATGATAAGTAGTGTCAAGTTGACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR GCA 90 bp | TTTTGTCAACTTGACACTACTTATCATGGAGAAGTAACAGATGAAGTCAAGGACAAAGAAGGAGAGGCCTaGAAAGAGGGCGAGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FCQLDTTYHGEVTDEVKDKEGEA*KEGEPV Trigger: TACTGGCTCGCCCTCTTTGCAGGCCTCTCCTTCTTT...GTCCTTGACTTCATCTGTTACTTCTCCATGATAAGTAGTGTCAAGTTGACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS GCA 90 bp | GCCGCGGAGCTCCTCTGGTGTGCTCGTGGCACTACTGCTGTGACCTaGCAGGTCCGGGCCACTCAGCGTACTGGACGGGCTTCGCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AAELLWCARGTTAVT*QVRATQRTGRASRG Trigger: CCCTCGCGAAGCCCGTCCAGTACGCTGAGTGGCCCGGACCTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCCGCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS TCA 90 bp | GCTAGCAGCAGTGTCCGGCTTAGCAGGTGCTGCACAACGCTCGCCTaGAGGGCCCCCAGGGGCAGCTCGCCAAGGCGAGCGGACTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSSVRLSRCCTTLA*RAPRGSSPRRADFG Trigger: CCCAAAGTCCGCTCGCCTTGGCGAGCTGCCCCTGGGGGCCCTTCAGGCGAGCGTTGTGCAGCACCTGCTAAGCCGGACACTGCTGCTAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS GCA 90 bp | GACAGCCCTCGGGCCCACTATCGTAGCCGCGGAGCTCCTCTGGTGTaGTCGTGGCACTACTGCTGTGACCTGCCAGGTCCGGGCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: DSPRAHYRSRGAPLV*SWHYCCDLPGPGHS Trigger: TGAGTGGCCCGGACCTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCCGCGGCTACGATAGTGGGCCCGAGGGCTGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS CCA 90 bp | CCTCGGGCCCACTATCGTAGCCGCGGAGCTCCTCTGGTGTGCTCGTaGCACTACTGCTGTGACCTGCCAGGTCCGGGCCACTCAGCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PRAHYRSRGAPLVCS*HYCCDLPGPGHSAY Trigger: GTACGCTGAGTGGCCCGGACCTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCCGCGGCTACGATAGTGGGCCCGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS CCA 90 bp | TGTAGGACAGCCCTCGGGCCCACTATCGTAGCCGCGGAGCTCCTCTaGTGTGCTCGTGGCACTACTGCTGTGACCTGCCAGGTCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CRTALGPTIVAAELL*CARGTTAVTCQVRA Trigger: GGCCCGGACCTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCCGCGGCTACGATAGTGGGCCCGAGGGCTGTCCTACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS TCA 90 bp | GCTGCCTCGGTGGTCAGAGGACGCTGTCTGGCACTGGGAGCTGGTTaGGGAAGTCCCACCTCTGTAGCTGGAGCCCTGGACCGACGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AASVVRGRCLALGAG*GSPTSVAGALDRRV Trigger: CACCCGTCGGTCCAGGGCTCCAGCTACAGAGGTGGGACTTCCTCAACCAGCTCCCAGTGCCAGACAGCGTCCTCTGACCACCGAGGCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS TCA 90 bp | GGCCCCCAGGGGCAGCTCGCCAAGGCGAGCGGACTTTGGGCTTCTTaGGGATGCTCCTGCACAGTCTGCAGCAGTCACCTTCGCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GPQGQLAKASGLWAS*GCSCTVCSSHLRTA Trigger: GGCAGTGCGAAGGTGACTGCTGCAGACTGTGCAGGAGCATCCTCAAGAAGCCCAAAGTCCGCTCGCCTTGGCGAGCTGCCCCTGGGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS GCA 90 bp | CACTATCGTAGCCGCGGAGCTCCTCTGGTGTGCTCGTGGCACTACTaGTGTGACCTGCCAGGTCCGGGCCACTCAGCGTACTGGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HYRSRGAPLVCSWHY*CDLPGPGHSAYWTG Trigger: GCCCGTCCAGTACGCTGAGTGGCCCGGACCTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCCGCGGCTACGATAGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS GCA 90 bp | CTCCGTGGCACTGGGTTCAGAAGCACTGCTCCCAGGTTTCCTGGCTaGCTCGGTGGTCAGAGGACGCTGTCTGGCACTGGGAGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRGTGFRSTAPRFPG*LGGQRTLSGTGSWL Trigger: CAACCAGCTCCCAGTGCCAGACAGCGTCCTCTGACCACCGAGGCAGCCAGGAAACCTGGGAGCAGTGCTTCTGAACCCAGTGCCACGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS CCA 90 bp | TCAGCTCCGTGGCACTGGGTTCAGAAGCACTGCTCCCAGGTTTCCTaGCTGCCTCGGTGGTCAGAGGACGCTGTCTGGCACTGGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAPWHWVQKHCSQVS*LPRWSEDAVWHWEL Trigger: CAGCTCCCAGTGCCAGACAGCGTCCTCTGACCACCGAGGCAGCCAGGAAACCTGGGAGCAGTGCTTCTGAACCCAGTGCCACGGAGCTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS TCA 90 bp | GGACTGTGGTCTGGGTTGGGTGCAGAGCTTGCTGCCCTTTCGACTTaGGCTGCGAGGTATGCGCAGGAGCCCGTGGGGTTACACGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLWSGLGAELAALST*AARYAQEPVGLHVV Trigger: CACCACGTGTAACCCCACGGGCTCCTGCGCATACCTCGCAGCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAACCCAGACCACAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS GCA 90 bp | GTGGTCTGGGTTGGGTGCAGAGCTTGCTGCCCTTTCGACTTGAGCTaGGAGGTATGCGCAGGAGCCCGTGGGGTTACACGTGGTGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VVWVGCRACCPFDLS*EVCAGARGVTRGET Trigger: GGTCTCACCACGTGTAACCCCACGGGCTCCTGCGCATACCTCGCAGCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAACCCAGACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 90 bp | CTGGGCCAGCAGTGGGAGGCCATGGCAGGGGAACTCCTGGAGTGCTaGGTACTGCTAACTGTGGAGCAGAACTTCGACTCCAGGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LGQQWEAMAGELLEC*VLLTVEQNFDSRKR Trigger: CCGCTTCCTGGAGTCGAAGTTCTGCTCCACAGTTAGCAGTACGCAGCACTCCAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 90 bp | AAGAGCGGCTTTGCTGGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTaGAAGAGCGGCTTTGCAGACGCCTGGGGCTCGCTCCACCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KSGFAGLWKSGFAGL*KSGFADAWGSLHQG Trigger: TCCCTGGTGGAGCGAGCCCCAGGCGTCTGCAAAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CCA 90 bp | CGGCTTTTGCAGGCTGCCACCAGCAACAGAGCGTCTCCTAAAGGCTaGGCTCAGCTCCGTGGCACTGGGTTCAGAAGCACTGCTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLQAATSNRASPKG*AQLRGTGFRSTAPR Trigger: CCTGGGAGCAGTGCTTCTGAACCCAGTGCCACGGAGCTGAGCCCAGCCTTTAGGAGACGCTCTGTTGCTGGTGGCAGCCTGCAAAAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 90 bp | TGGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTGGAAGAGCGGCTTTaGTGGTCTGTGGAAGAGCGGCTTTGCAGACGCCTGGGGCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: WSVEERLCWSVEERL*WSVEERLCRRLGLA Trigger: AGCGAGCCCCAGGCGTCTGCAAAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CCA 90 bp | CACTGGGTTCAGAAGCACTGCTCCCAGGTTTCCTGGCTGCCTCGGTaGTCAGAGGACGCTGTCTGGCACTGGGAGCTGGTTGAGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HWVQKHCSQVSWLPR*SEDAVWHWELVEEV Trigger: GACTTCCTCAACCAGCTCCCAGTGCCAGACAGCGTCCTCTGACCACCGAGGCAGCCAGGAAACCTGGGAGCAGTGCTTCTGAACCCAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 90 bp | TTGTTCTTCCTTGGGACTGTGGTCTGGGTTGGGTGCAGAGCTTGCTaGCCTTTCGACTTGAGCTGCGAGGTATGCGCAGGAGCCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFFLGTVVWVGCRAC*PFDLSCEVCAGARG Trigger: CCCACGGGCTCCTGCGCATACCTCGCAGCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAACCCAGACCACAGTCCCAAGGAAGAACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 90 bp | GGCTTGTTCTTCCTTGGGACTGTGGTCTGGGTTGGGTGCAGAGCTTaGTGCCCTTTCGACTTGAGCTGCGAGGTATGCGCAGGAGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: GLFFLGTVVWVGCRA*CPFDLSCEVCAGAR Trigger: ACGGGCTCCTGCGCATACCTCGCAGCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAACCCAGACCACAGTCCCAAGGAAGAACAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 90 bp | ACCTGCCCCAGCACTGCGCGCTGGTGCCCCGTGAATAGTGGTCTGTaGAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCTGCTTTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TCPSTARWCPVNSGL*KSCFAGLWKSCFAG Trigger: ACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCACTATTCACGGGGCACCAGCGCGCAGTGCTGGGGCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CCA 90 bp | AAGAAAGAAGGAGAGGCCTGCAAAGAGGGCGAGCCAGTAGAGAGTTaGGTGGATAGAGGGGACAAGGCCAAAGGAGGAGGCGTGGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KKEGEACKEGEPVES*VDRGDKAKGGGVAG Trigger: GCCGGCCACGCCTCCTCCTTTGGCCTTGTCCCCTCTATCCACCCAACTCTCTACTGGCTCGCCCTCTTTGCAGGCCTCTCCTTCTTTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 90 bp | ATTCGTAGATGGTGCACAGGCCATCAGAGGAACCTGGGCCAGCAGTaGGAGGCCATGGCAGGGGAACTCCTGGAGTGCTGCGTACTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: IRRWCTGHQRNLGQQ*EAMAGELLECCVLL Trigger: TAGCAGTACGCAGCACTCCAGGAGTTCCCCTGCCATGGCCTCCCACTGCTGGCCCAGGTTCCTCTGATGGCCTGTGCACCATCTACGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 90 bp | CAGAGCCAGGCATTGGTTCTGGCTCCACATCTAGGGATCCCGGGGTaGGGGCCACCGACTCTGGTCCTTCAGATTCGTAGATGGTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QSQALVLAPHLGIPG*GPPTLVLQIRRWCT Trigger: TGTGCACCATCTACGAATCTGAAGGACCAGAGTCGGTGGCCCCCACCCCGGGATCCCTAGATGTGGAGCCAGAACCAATGCCTGGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CAA 90 bp | ACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGCCCAAGGGCACTGGGAGCTGGTaGAGGAAGTCCCACCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TQSSTPAREWWAFPPQPKGTGSW*RKSHLC Trigger: ACAGAGGTGGGACTTCCTCAACCAGCTCCCAGTGCC...CTTGGGCTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 90 bp | GGTGGAGCTAGCAATGGGGGTGTGGCTGGTGTAGAGGGGAGGTTCTaGAGAGAAAGAGGCGGAGGTGATGGTGAGCCTTGTCCAGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GGASNGGVAGVEGRF*RERGGGDGEPCPDC Trigger: ACAGTCTGGACAAGGCTCACCATCACCTCCGCCTCTTTCTCTGCAGAACCTCCCCTCTACACCAGCCACACCCCCATTGCTAGCTCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 90 bp | GGGTTCCTTAGTCGGAGGTTGGAGTCTCTTCTGGACAACAGGGCCTaGTCTGGCAATCCCACTGCTGGCACGCCCGGGGCTAGAAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: GFLSRRLESLLDNRA*SGNPTAGTPGARNR Trigger: TCTATTTCTAGCCCCGGGCGTGCCAGCAGTGGGATTGCCAGACCAGGCCCTGTTGTCCAGAAGAGACTCCAACCTCCGACTAAGGAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168386.9 ENSMUST00000177491.8 |
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| CDS-3UTR CAA 90 bp | CCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGTGTGGAAGAGCTGCTTaGCTGGTCTGTGGAAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PLTQSSTPAREWWAFPPQCGRAA*LVCGRA Trigger: CGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACA...CTGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS TCA 90 bp | GAGGGCGGCAAGGTCAACAAAGAGGCCTGTGAAGTGGGCAAAGTCTaGGAAAGTGGGAGCCTCAGAGGAGGCGTGACCACGGAAGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EGGKVNKEACEVGKV*ESGSLRGGVTTEEV Trigger: TACCTCTTCCGTGGTCACGCCTCCTCTGAGGCTCCCACTTTCTCAGACTTTGCCCACTTCACAGGCCTCTTTGTTGACCTTGCCGCCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 90 bp | AGCACTGCGCGCTGGTGCCCCGTGAATAGTGGTCTGTGGAAGAGCTaGTTTGCTGGTCTGTGGAAGAGCTGCTTTGCTGGTCTGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: STARWCPVNSGLWKS*FAGLWKSCFAGLWK Trigger: CTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCACTATTCACGGGGCACCAGCGCGCAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CCA 90 bp | GGAGGAGAGGGAGGAAGTGTGGTTTGCGAGGGATCATCTGGGCCCTaGACAGAGGAAGCACCAGGTGGAGTGGGCGTGACTAAAGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: GGEGGSVVCEGSSGP*TEEAPGGVGVTKDE Trigger: TTCATCTTTAGTCACGCCCACTCCACCTGGTGCTTCCTCTGTCCAGGGCCCAGATGATCCCTCGCAAACCACACTTCCTCCCTCTCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 90 bp | GTGGAGGAGACGAGGCTAGAGATAGAGGAGCAGGTGAGAAAGGCATaGCCGAGAGAGTCTCCTGAGGGAGCGTTGCTGAAGAAGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VEETRLEIEEQVRKA*PRESPEGALLKKPG Trigger: ACCAGGCTTCTTCAGCAACGCTCCCTCAGGAGACTCTCTCGGCCATGCCTTTCTCACCTGCTCCTCTATCTCTAGCCTCGTCTCCTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CAA 90 bp | TCCGCTGACACAATCCAGTACTCCAGCCAGGGAATGGTGGGCGTTTCCGCCTCAGGAGACTCAGAAAAGTaGGCCCGGAAAGGAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SADTIQYSSQGMVGVSASGDSEK*ARKGVE Trigger: CTCCACTCCTTTCCGGGCCAACTTTTCTGAGTCTCC...TGAGGCGGAAACGCCCACCATTCCCTGGCTGGAGTACTGGATTGTGTCAGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 90 bp | TGGTCTGTGGAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCTGCTTTaGTGGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTGGAAGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WSVEELLCWSVEELL*WSVEERLCWSVEER Trigger: CCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CCA 90 bp | TCTGTGGAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCGGCTTTGCTaGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTGGAAGAGCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVEELLCWSVEERLC*SVEERLCWSVEERL Trigger: AAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CCA 90 bp | AGGCTTGTGGTTGGAGTAGTTGAAGAGAAGCTGGTAGAGGCGGGGTaGTGGGAGGAGAGGGAGGAAGTGTGGTTTGCGAGGGATCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLVVGVVEEKLVEAG*WEEREEVWFARDHL Trigger: CAGATGATCCCTCGCAAACCACACTTCCTCCCTCTCCTCCCACCACCCCGCCTCTACCAGCTTCTCTTCAACTACTCCAACCACAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CAA 90 bp | CTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATGGAAGGCCAGAAGCTGGGGGCCTGTaGGCTGGGCTACGAGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: LGEGVWLRQNRRSSNGRPEAGGL*AGLRGP Trigger: AGGTCCTCGTAGCCCAGCCAACAGGCCCCCAGCTTC...TGGCCTTCCATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS TCA 90 bp | GAGCCTCAGAGGAGGCGTGACCACGGAAGAGGTAGGCAGAGGTGGTaGGATGGAGGTAGACGAAGAAACTGGAGGAGAAATGGCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EPQRRRDHGRGRQRW*DGGRRRNWRRNGQK Trigger: TTTCTGGCCATTTCTCCTCCAGTTTCTTCGTCTACCTCCATCTCACCACCTCTGCCTACCTCTTCCGTGGTCACGCCTCCTCTGAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS GCA 90 bp | GTAGACGAAGAAACTGGAGGAGAAATGGCCAGAAACAGAGGATCTTaGAAAGACGGCGTGGTTCGATTAGCGAGCGTGGCCCGGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VDEETGGEMARNRGS*KDGVVRLASVARGR Trigger: CCTTCCCCGGGCCACGCTCGCTAATCGAACCACGCCGTCTTTGCAAGATCCTCTGTTTCTGGCCATTTCTCCTCCAGTTTCTTCGTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS CCA 90 bp | TCTGTGGAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCTGCTTTGCTaGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTGGAAGAGCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVEELLCWSVEELLC*SVEERLCWSVEERL Trigger: AAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
||
| CDS CCA 90 bp | TGCCCCGTGAATAGTGGTCTGTGGAAGAGCTGCTTTGCTGGTCTGTaGAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCGGCTTTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CPVNSGLWKSCFAGL*KSCFAGLWKSGFAG Trigger: ACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCACTATTCACGGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
||
| CDS GCA 90 bp | AATAGTGGTCTGTGGAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCTaGTTTGCTGGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NSGLWKSCFAGLWKS*FAGLWKSGFAGLWK Trigger: CTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCACTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGCAGAGCGCATAGGTGCCAGCATGTAAACCATTCAGCATGTAAACTATCGTGTGGAAGAGCGGCTTaGCTGGTCTGTGGAAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGRAHRCQHVNHSACKLSCGRAA*LVCGRA Trigger: CGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACA...CGATAGTTTACATGCTGAATGGTTTACATGCTGGCACCTATGCGCTCTGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS TCA 90 bp | GGAGACTCAGAAAAGTTGGCCCGGAAAGGAGTGGAGAGAGGCAACTaGGAAGACGTGACAAGGGAAGTGGGCAAATTCTGCGGGGAAATT | + |
|
Preference number: 5 (lower is better) Translates to: GDSEKLARKGVERGN*EDVTREVGKFCGEI Trigger: AATTTCCCCGCAGAATTTGCCCACTTCCCTTGTCACGTCTTCTCAGTTGCCTCTCTCCACTCCTTTCCGGGCCAACTTTTCTGAGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CAA 90 bp | AATCCAGCCAAGTGTCACAGGAAGTGGGAGTGGAGACTAAGACAAAAGAGGCGTAGGGCTTGTTCTTCCTaGGGACTGTGGTCTGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NPAKCHRKWEWRLRQKRRRACSS*GLWSGL Trigger: CAACCCAGACCACAGTCCCAAGGAAGAACAAGCCCT...ACGCCTCTTTTGTCTTAGTCTCCACTCCCACTTCCTGTGACACTTGGCTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CAA 90 bp | CGCCTCAGCCCAAGCAAGTTAGTTCCCATAGGCATGTCAAAAGGCCCCTCTTTTCTCTGTACAGAGGGCTaGTTCTTCCTTGGGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLSPSKLVPIGMSKGPSFLCTEG*FFLGTV Trigger: CACAGTCCCAAGGAAGAACAAGCCCTCTGTACAGAG...AAAAGAGGGGCCTTTTGACATGCCTATGGGAACTAACTTGCTTGGGCTGAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CAA 90 bp | GGTGGCAGAGCGCATAGGTGCCAGCATGTAAACCATTCAGCATGTAAACTATCGTGTGGAAGAGCTGCTTaGCTGGTCTGTGGAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGRAHRCQHVNHSACKLSCGRAA*LVCGRA Trigger: AGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACA...CGATAGTTTACATGCTGAATGGTTTACATGCTGGCACCTATGCGCTCTGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CAA 90 bp | GGTGGCAGAGCGCATAGGTGCCAGCATGTAAACCATTCAGCATGTAAACTATCGCAGAAACAGAGGATCTaGCAAAGACGGCGTGGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: GGRAHRCQHVNHSACKLSQKQRI*QRRRGS Trigger: CGAACCACGCCGTCTTTGCAAGATCCTCTGTTTCTG...CGATAGTTTACATGCTGAATGGTTTACATGCTGGCACCTATGCGCTCTGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CAA 90 bp | CTTGGAGAAGGGGTGTGGCTTAGGCAAAATAGGAGAAGCTCAAATGGAAGGCCATTCCTTAGTCGGAGGTaGGAGTCTCTTCTGGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGEGVWLRQNRRSSNGRPFLSRR*ESLLDN Trigger: GTTGTCCAGAAGAGACTCCAACCTCCGACTAAGGAA...TGGCCTTCCATTTGAGCTTCTCCTATTTTGCCTAAGCCACACCCCTTCTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS-3UTR CAA 90 bp | TTTTGTCAACTTGACACTACTTATCATGGAGAAGTAACAGATGAAGTCAAGGACTCTGCGGACAGGGTATaGTCAGAGGAGAAGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FCQLDTTYHGEVTDEVKDSADRV*SEEKER Trigger: CCTCTCCTTCTCCTCTGACAATACCCTGTCCGCAGA...GTCCTTGACTTCATCTGTTACTTCTCCATGATAAGTAGTGTCAAGTTGACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS-3UTR CAA 90 bp | TTTTGTCAACTTGACACTACTTATCATGGAGAAGTAACAGATGAAGTCAAGGACCGGACTTTGGGCTTCTaGAGGATGCTCCTGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: FCQLDTTYHGEVTDEVKDRTLGF*RMLLHS Trigger: ACTGTGCAGGAGCATCCTCAAGAAGCCCAAAGTCCG...GTCCTTGACTTCATCTGTTACTTCTCCATGATAAGTAGTGTCAAGTTGACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS TCA 72 bp | AGTGTCCGGCTTAGCAGGTGCTGCACAACGCTCGCCTaGAGGGCCCCCAGGGGCAGCTCGCCAAGGCGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SVRLSRCCTTLA*RAPRGSSPRRA Trigger: CGCTCGCCTTGGCGAGCTGCCCCTGGGGGCCCTTCAGGCGAGCGTTGTGCAGCACCTGCTAAGCCGGACACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 72 bp | AGCCGCGGAGCTCCTCTGGTGTGCTCGTGGCACTACTaGTGTGACCTGCCAGGTCCGGGCCACTCAGCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SRGAPLVCSWHY*CDLPGPGHSAY Trigger: GTACGCTGAGTGGCCCGGACCTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCCGCGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS GCA 72 bp | CGGGCCCACTATCGTAGCCGCGGAGCTCCTCTGGTGTaGTCGTGGCACTACTGCTGTGACCTGCCAGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RAHYRSRGAPLV*SWHYCCDLPGP Trigger: CGGACCTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCCGCGGCTACGATAGTGGGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | GCCCTCGGGCCCACTATCGTAGCCGCGGAGCTCCTCTaGTGTGCTCGTGGCACTACTGCTGTGACCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ALGPTIVAAELL*CARGTTAVTCQ Trigger: CTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCCGCGGCTACGATAGTGGGCCCGAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CAA 72 bp | GGGCCCCCAGGGGCAGCTCGCCAAGGCGAGCGGACTTaGGGCTTCTTGAGGATGCTCCTGCACAGTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPPGAARQGERT*GFLRMLLHSLQ Trigger: CTGCAGACTGTGCAGGAGCATCCTCAAGAAGCCCAAAGTCCGCTCGCCTTGGCGAGCTGCCCCTGGGGGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS CAA 90 bp | GGCTGCCTCGGTGGTCAGAGGACGCTGTCTGGCACTGGGAGCTGGTaGAGGAAGTCCCACCTCTGTAGCTGGAGCCCTGGACCGACGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GCLGGQRTLSGTGSW*RKSHLCSWSPGPTG Trigger: ACCCGTCGGTCCAGGGCTCCAGCTACAGAGGTGGGACTTCCTCAACCAGCTCCCAGTGCCAGACAGCGTCCTCTGACCACCGAGGCAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CAA 90 bp | GGGCCCCCAGGGGCAGCTCGCCAAGGCGAGCGGACTTTGGGCTTCTaGAGGATGCTCCTGCACAGTCTGCAGCAGTCACCTTCGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPPGAARQGERTLGF*RMLLHSLQQSPSHC Trigger: GCAGTGCGAAGGTGACTGCTGCAGACTGTGCAGGAGCATCCTCAAGAAGCCCAAAGTCCGCTCGCCTTGGCGAGCTGCCCCTGGGGGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS TCA 72 bp | CGGAGCTCCTCTGGTGTGCTCGTGGCACTACTGCTGTaGCCTGCCAGGTCCGGGCCACTCAGCGTACTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RSSSGVLVALLL*PARSGPLSVLD Trigger: GTCCAGTACGCTGAGTGGCCCGGACCTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 72 bp | CTCCTCTGGTGTGCTCGTGGCACTACTGCTGTGACCTaGCAGGTCCGGGCCACTCAGCGTACTGGACGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLWCARGTTAVT*QVRATQRTGRA Trigger: AGCCCGTCCAGTACGCTGAGTGGCCCGGACCTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 72 bp | CTCCCGAGACACCACCCACCCCTGAGCCTCCTGAACTaGCTTCGCAGCCCACAGCTGCACCTTCTGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LPRHHPPLSLLN*LRSPQLHLLQL Trigger: CAGCTGCAGAAGGTGCAGCTGTGGGCTGCGAAGGCAGTTCAGGAGGCTCAGGGGTGGGTGGTGTCTCGGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | ACTGGGAGCTGGTTGAGGAAGTCCCACCTCTGTAGCTaGAGCCCTGGACCGACGGGTGATGGCAGGGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGSWLRKSHLCS*SPGPTGDGRGG Trigger: CCCTCCCCTGCCATCACCCGTCGGTCCAGGGCTCCAGCTACAGAGGTGGGACTTCCTCAACCAGCTCCCAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | CACTATCGTAGCCGCGGAGCTCCTCTGGTGTGCTCGTaGCACTACTGCTGTGACCTGCCAGGTCCGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HYRSRGAPLVCS*HYCCDLPGPGH Trigger: GTGGCCCGGACCTGGCAGGTCACAGCAGTAGTGCCACGAGCACACCAGAGGAGCTCCGCGGCTACGATAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CAA 90 bp | CTGCACAGTCTGCAGCAGTCACCTTCGCACTGCCAGAGCCAGGCATaGGTTCTGGCTCCACATCTAGGGATCCCGGGGTGGGGGCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: LHSLQQSPSHCQSQA*VLAPHLGIPGWGPP Trigger: CGGTGGCCCCCACCCCGGGATCCCTAGATGTGGAGCCAGAACCAATGCCTGGCTCTGGCAGTGCGAAGGTGACTGCTGCAGACTGTGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CAA 90 bp | TCGCCTGAAGGGCCCCCAGGGGCAGCTCGCCAAGGCGAGCGGACTTaGGGCTTCTTGAGGATGCTCCTGCACAGTCTGCAGCAGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SPEGPPGAARQGERT*GFLRMLLHSLQQSP Trigger: AGGTGACTGCTGCAGACTGTGCAGGAGCATCCTCAAGAAGCCCAAAGTCCGCTCGCCTTGGCGAGCTGCCCCTGGGGGCCCTTCAGGCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 72 bp | CTGGGCTCAGCTCCGTGGCACTGGGTTCAGAAGCACTaGTCCCAGGTTTCCTGGCTGCCTCGGTGGTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LGSAPWHWVQKH*SQVSWLPRWSE Trigger: CTCTGACCACCGAGGCAGCCAGGAAACCTGGGAGCAGTGCTTCTGAACCCAGTGCCACGGAGCTGAGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | TTTGCTGGTCTGTGGAAGAGCGGCTTTGCAGACGCCTaGGGCTCGCTCCACCAGGGACCTTCGCCCCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: FAGLWKSGFADA*GSLHQGPSPHS Trigger: GCTATGGGGCGAAGGTCCCTGGTGGAGCGAGCCCCAGGCGTCTGCAAAGCCGCTCTTCCACAGACCAGCAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CCA 72 bp | AGTCGGAGGTTGGAGTCTCTTCTGGACAACAGGGCCTaGTCTGGCAATCCCACTGCTGGCACGCCCGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRRLESLLDNRA*SGNPTAGTPGA Trigger: AGCCCCGGGCGTGCCAGCAGTGGGATTGCCAGACCAGGCCCTGTTGTCCAGAAGAGACTCCAACCTCCGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168386.9 ENSMUST00000177491.8 |
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| CDS CAA 90 bp | CTGGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTGGAAGAGCGGCTTaGCAGACGCCTGGGGCTCGCTCCACCAGGGACCTTCGCCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: LVCGRAALLVCGRAA*QTPGARSTRDLRPI Trigger: TATGGGGCGAAGGTCCCTGGTGGAGCGAGCCCCAGGCGTCTGCAAAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CAA 90 bp | GGGACTGTGGTCTGGGTTGGGTGCAGAGCTTGCTGCCCTTTCGACTaGAGCTGCGAGGTATGCGCAGGAGCCCGTGGGGTTACACGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GTVVWVGCRACCPFD*SCEVCAGARGVTRG Trigger: ACCACGTGTAACCCCACGGGCTCCTGCGCATACCTCGCAGCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAACCCAGACCACAGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | GTTTCCTGGCTGCCTCGGTGGTCAGAGGACGCTGTCTaGCACTGGGAGCTGGTTGAGGAAGTCCCACCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSWLPRWSEDAV*HWELVEEVPPL Trigger: CAGAGGTGGGACTTCCTCAACCAGCTCCCAGTGCCAGACAGCGTCCTCTGACCACCGAGGCAGCCAGGAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | CAGAAGCACTGCTCCCAGGTTTCCTGGCTGCCTCGGTaGTCAGAGGACGCTGTCTGGCACTGGGAGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QKHCSQVSWLPR*SEDAVWHWELV Trigger: AACCAGCTCCCAGTGCCAGACAGCGTCCTCTGACCACCGAGGCAGCCAGGAAACCTGGGAGCAGTGCTTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CAA 72 bp | GTCTGGGTTGGGTGCAGAGCTTGCTGCCCTTTCGACTaGAGCTGCGAGGTATGCGCAGGAGCCCGTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VWVGCRACCPFD*SCEVCAGARGV Trigger: AACCCCACGGGCTCCTGCGCATACCTCGCAGCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAACCCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CAA 72 bp | GGGGCAGCTCGCCAAGGCGAGCGGACTTTGGGCTTCTaGAGGATGCTCCTGCACAGTCTGCAGCAGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GAARQGERTLGF*RMLLHSLQQSP Trigger: AGGTGACTGCTGCAGACTGTGCAGGAGCATCCTCAAGAAGCCCAAAGTCCGCTCGCCTTGGCGAGCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CAA 90 bp | GGGCTTGTTCTTCCTTGGGACTGTGGTCTGGGTTGGGTGCAGAGCTaGCTGCCCTTTCGACTTGAGCTGCGAGGTATGCGCAGGAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: GLVLPWDCGLGWVQS*LPFRLELRGMRRSP Trigger: CGGGCTCCTGCGCATACCTCGCAGCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAACCCAGACCACAGTCCCAAGGAAGAACAAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS TCA 72 bp | TCTGGGTTGGGTGCAGAGCTTGCTGCCCTTTCGACTTaGGCTGCGAGGTATGCGCAGGAGCCCGTGGGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: SGLGAELAALST*AARYAQEPVGL Trigger: TAACCCCACGGGCTCCTGCGCATACCTCGCAGCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAACCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS TCA 72 bp | GGAGCAGGTGAGAAAGGCATGGCCGAGAGAGTCTCCTaGGGGAGCGTTGCTGAAGAAGCCTGGTTAGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GAGEKGMAERVS*GSVAEEAWLGG Trigger: GCCCCCTAACCAGGCTTCTTCAGCAACGCTCCCTCAGGAGACTCTCTCGGCCATGCCTTTCTCACCTGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS TCA 72 bp | GGGCAGCTCGCCAAGGCGAGCGGACTTTGGGCTTCTTaGGGATGCTCCTGCACAGTCTGCAGCAGTCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: GQLAKASGLWAS*GCSCTVCSSHL Trigger: AAGGTGACTGCTGCAGACTGTGCAGGAGCATCCTCAAGAAGCCCAAAGTCCGCTCGCCTTGGCGAGCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 72 bp | GTTGGGTGCAGAGCTTGCTGCCCTTTCGACTTGAGCTaGGAGGTATGCGCAGGAGCCCGTGGGGTTACACGT | + |
|
Preference number: 6 (lower is better) Translates to: VGCRACCPFDLS*EVCAGARGVTR Trigger: ACGTGTAACCCCACGGGCTCCTGCGCATACCTCGCAGCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | TTTGCTGGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTaGAAGAGCGGCTTTGCAGACGCCTGGGGCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FAGLWKSGFAGL*KSGFADAWGSL Trigger: GAGCGAGCCCCAGGCGTCTGCAAAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CCA 72 bp | GGAGGAAGTGTGGTTTGCGAGGGATCATCTGGGCCCTaGACAGAGGAAGCACCAGGTGGAGTGGGCGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: GGSVVCEGSSGP*TEEAPGGVGVT Trigger: AGTCACGCCCACTCCACCTGGTGCTTCCTCTGTCCAGGGCCCAGATGATCCCTCGCAAACCACACTTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | AGGAGAGGGAGGAAGTGTGGTTTGCGAGGGATCATCTaGGCCCTGGACAGAGGAAGCACCAGGTGGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RRGRKCGLRGII*ALDRGSTRWSG Trigger: CCCACTCCACCTGGTGCTTCCTCTGTCCAGGGCCCAGATGATCCCTCGCAAACCACACTTCCTCCCTCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | GGAGAGGCCTGCAAAGAGGGCGAGCCAGTAGAGAGTTaGGTGGATAGAGGGGACAAGGCCAAAGGAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GEACKEGEPVES*VDRGDKAKGGG Trigger: GCCTCCTCCTTTGGCCTTGTCCCCTCTATCCACCCAACTCTCTACTGGCTCGCCCTCTTTGCAGGCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | CACAGTCCAGTCACCCTGTGGGGAGGCCACATCATCTaGGGAGAAGCTGGTGACCGAAGTGATGCTGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: HSPVTLWGGHII*GEAGDRSDAGT Trigger: CGTGCCAGCATCACTTCGGTCACCAGCTTCTCCCCAGATGATGTGGCCTCCCCACAGGGTGACTGGACTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | AGCACTGCGCGCTGGTGCCCCGTGAATAGTGGTCTGTaGAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: STARWCPVNSGL*KSCFAGLWKSC Trigger: GCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCACTATTCACGGGGCACCAGCGCGCAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS TCA 72 bp | GGCACTGCCTGTGAAGAGGCTTGTGGTTGGAGTAGTTaGAGAGAAGCTGGTAGAGGCGGGGTGGTGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GTACEEACGWSS*REAGRGGVVGG Trigger: TCCTCCCACCACCCCGCCTCTACCAGCTTCTCTTCAACTACTCCAACCACAAGCCTCTTCACAGGCAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS GCA 72 bp | TTCCTTGGGACTGTGGTCTGGGTTGGGTGCAGAGCTTaGTGCCCTTTCGACTTGAGCTGCGAGGTATGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: FLGTVVWVGCRA*CPFDLSCEVCA Trigger: TGCGCATACCTCGCAGCTCAAGTCGAAAGGGCAGCAAGCTCTGCACCCAACCCAGACCACAGTCCCAAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS GCA 72 bp | AGCAATGGGGGTGTGGCTGGTGTAGAGGGGAGGTTCTaGAGAGAAAGAGGCGGAGGTGATGGTGAGCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SNGGVAGVEGRF*RERGGGDGEPC Trigger: ACAAGGCTCACCATCACCTCCGCCTCTTTCTCTGCAGAACCTCCCCTCTACACCAGCCACACCCCCATTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS CCA 72 bp | GGCGGAGGTGATGGTGAGCCTTGTCCAGACTGTGAATaGGGCACTGCCTGTGAAGAGGCTTGTGGTTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGGDGEPCPDCE*GTACEEACGWS Trigger: ACTCCAACCACAAGCCTCTTCACAGGCAGTGCCCCATTCACAGTCTGGACAAGGCTCACCATCACCTCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS CCA 72 bp | CGTGACAAGGGAAGTGGGCAAATTCTGCGGGGAAATTaGCGGGGAAGGAAGGAGTTGTGGAGGAGACGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RDKGSGQILRGN*RGRKELWRRRG Trigger: GCCTCGTCTCCTCCACAACTCCTTCCTTCCCCGCCAATTTCCCCGCAGAATTTGCCCACTTCCCTTGTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS CAA 90 bp | GTGGTCTGTGGAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCTGCTTaGCTGGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTGGAAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VVCGRAALLVCGRAA*LVCGRAALLVCGRA Trigger: CGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
||
| CDS TCA 72 bp | GGCCCTGGACAGAGGAAGCACCAGGTGGAGTGGGCGTaGCTAAAGATGAAGCAGGAATCAGGCTCTGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: GPGQRKHQVEWA*LKMKQESGSVQ Trigger: CTGTACAGAGCCTGATTCCTGCTTCATCTTTAGTCACGCCCACTCCACCTGGTGCTTCCTCTGTCCAGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
||
| CDS GCA 72 bp | GAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCGGCTTTaGTGGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: EELLCWSVEERL*WSVEERLCWSV Trigger: CACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS GCA 72 bp | CGCTGGTGCCCCGTGAATAGTGGTCTGTGGAAGAGCTaGTTTGCTGGTCTGTGGAAGAGCTGCTTTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RWCPVNSGLWKS*FAGLWKSCFAG Trigger: ACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCACTATTCACGGGGCACCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS GCA 72 bp | ATGCTCCTGCACAGTCTGCAGCAGTCACCTTCGCACTaGCAGAGCCAGGCATTGGTTCTGGCTCCACATCTA | + |
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Preference number: 6 (lower is better) Translates to: MLLHSLQQSPSH*QSQALVLAPHL Trigger: TAGATGTGGAGCCAGAACCAATGCCTGGCTCTGGCAGTGCGAAGGTGACTGCTGCAGACTGTGCAGGAGCAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CCA 72 bp | GAGCTGCTTTGCTGGTCTGTGGAAGAGCGGCTTTGCTaGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: ELLCWSVEERLC*SVEERLCWSVE Trigger: TTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CCA 72 bp | GAGGCAAAGCCAAGAGAGGACCCTGTGGAAAACATGTaGCTGTGTCCAGGGAAGAGGTGGAAGCTGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: EAKPREDPVENM*LCPGKRWKLAE Trigger: CTCTGCCAGCTTCCACCTCTTCCCTGGACACAGCCACATGTTTTCCACAGGGTCCTCTCTTGGCTTTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CAA 90 bp | GGTAGACGAAGAAACTGGAGGAGAAATGGCCAGAAACAGAGGATCTaGCAAAGACGGCGTGGTTCGATTAGCGAGCGTGGCCCGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GRRRNWRRNGQKQRI*QRRRGSISERGPGK Trigger: CTTCCCCGGGCCACGCTCGCTAATCGAACCACGCCGTCTTTGCAAGATCCTCTGTTTCTGGCCATTTCTCCTCCAGTTTCTTCGTCTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS TCA 72 bp | AAGGTCAACAAAGAGGCCTGTGAAGTGGGCAAAGTCTaGGAAAGTGGGAGCCTCAGAGGAGGCGTGACCACG | + |
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Preference number: 6 (lower is better) Translates to: KVNKEACEVGKV*ESGSLRGGVTT Trigger: CGTGGTCACGCCTCCTCTGAGGCTCCCACTTTCTCAGACTTTGCCCACTTCACAGGCCTCTTTGTTGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 72 bp | GAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCTGCTTTaGTGGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: EELLCWSVEELL*WSVEERLCWSV Trigger: CACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS GCA 72 bp | CTGTGGAAGAGCTGCTTTGCTGGTCTGTGGAAGAGCTaGTTTGCTGGTCTGTGGAAGAGCGGCTTTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LWKSCFAGLWKS*FAGLWKSGFAG Trigger: ACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CCA 72 bp | GAGCTGCTTTGCTGGTCTGTGGAAGAGCTGCTTTGCTaGTCTGTGGAAGAGCGGCTTTGCTGGTCTGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: ELLCWSVEELLC*SVEERLCWSVE Trigger: TTCCACAGACCAGCAAAGCCGCTCTTCCACAGACCAGCAAAGCAGCTCTTCCACAGACCAGCAAAGCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168386.9 ENSMUST00000175906.2 ENSMUST00000177491.8 |
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| CDS CAA 72 bp | CAGGAATCAGGCTCTGTACAGAGGGCTTGTTCTTCCTaGGGACTGTGGTCTGGGTTGGGTGCAGAGCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: QESGSVQRACSS*GLWSGLGAELA Trigger: AGCAAGCTCTGCACCCAACCCAGACCACAGTCCCAAGGAAGAACAAGCCCTCTGTACAGAGCCTGATTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS TCA 72 bp | CCCGGAAAGGAGTGGAGAGAGGCAACTGAGAAGACGTaGCAAGGGAAGTGGGCAAATTCTGCGGGGAAATTG | + |
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Preference number: 6 (lower is better) Translates to: PGKEWREATEKT*QGKWANSAGKL Trigger: CAATTTCCCCGCAGAATTTGCCCACTTCCCTTGTCACGTCTTCTCAGTTGCCTCTCTCCACTCCTTTCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS GCA 72 bp | GAAACTGGAGGAGAAATGGCCAGAAACAGAGGATCTTaGAAAGACGGCGTGGTTCGATTAGCGAGCGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ETGGEMARNRGS*KDGVVRLASVA Trigger: GGCCACGCTCGCTAATCGAACCACGCCGTCTTTGCAAGATCCTCTGTTTCTGGCCATTTCTCCTCCAGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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| CDS CAA 72 bp | AGAAACTGGAGGAGAAATGGCCAGAAACAGAGGATCTaGCAAAGACGGCGTGGTTCGATTAGCGAGCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: RNWRRNGQKQRI*QRRRGSISERG Trigger: GCCACGCTCGCTAATCGAACCACGCCGTCTTTGCAAGATCCTCTGTTTCTGGCCATTTCTCCTCCAGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168386.9 |
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