RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRR32 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037086

Ensembl transcript IDs: ENSMUST00000040002.4

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GAGCTCTTGGATTTTGAGGAATGCGGGCTCCTGTTCTTGGCACATTaGAGGGAGGTCTCAAGGAGACAGGAGGGCGGGTCCAGACATCTG +
Preference number: 5 (lower is better)
Translates to: ELLDFEECGLLFLAH*REVSRRQEGGSRHL
Trigger: CAGATGTCTGGACCCGCCCTCCTGTCTCCTTGAGACCTCCCTTCAATGTGCCAAGAACAGGAGCCCGCATTCCTCAAAATCCAAGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 90 bp GTGTCTTGGAGCTCTTGGATTTTGAGGAATGCGGGCTCCTGTTCTTaGCACATTGAAGGGAGGTCTCAAGGAGACAGGAGGGCGGGTCCA +
Preference number: 5 (lower is better)
Translates to: VSWSSWILRNAGSCS*HIEGRSQGDRRAGP
Trigger: TGGACCCGCCCTCCTGTCTCCTTGAGACCTCCCTTCAATGTGCCAAGAACAGGAGCCCGCATTCCTCAAAATCCAAGAGCTCCAAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS GCA 90 bp ATTGAAGGGAGGTCTCAAGGAGACAGGAGGGCGGGTCCAGACATCTaGATCATCCTCATCATCCTTCAACATGGAACTCAGAGAGCGGAG +
Preference number: 5 (lower is better)
Translates to: IEGRSQGDRRAGPDI*IILIILQHGTQRAE
Trigger: CTCCGCTCTCTGAGTTCCATGTTGAAGGATGATGAGGATGATGCAGATGTCTGGACCCGCCCTCCTGTCTCCTTGAGACCTCCCTTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS GCA 90 bp GGTAAGCCTGTAATACTGGGTGACAAAGGGAGAGAAGGACTCTGTTaGCAATTATCCATAGGGTGCCTTGGGCTACCCAGTGGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: GKPVILGDKGREGLC*QLSIGCLGLPSGKE
Trigger: TTCTTTCCCACTGGGTAGCCCAAGGCACCCTATGGATAATTGGCAACAGAGTCCTTCTCTCCCTTTGTCACCCAGTATTACAGGCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 90 bp AGGACTCTGTTGCCAATTATCCATAGGGTGCCTTGGGCTACCCAGTaGGAAAGAAACATGAGCCATGTTGCCTCTGTTTGCCATTCTAGC +
Preference number: 5 (lower is better)
Translates to: RTLLPIIHRVPWATQ*ERNMSHVASVCHSS
Trigger: GCTAGAATGGCAAACAGAGGCAACATGGCTCATGTTTCTTTCCCACTGGGTAGCCCAAGGCACCCTATGGATAATTGGCAACAGAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 90 bp CAAAGGGAGAGAAGGACTCTGTTGCCAATTATCCATAGGGTGCCTTaGGCTACCCAGTGGGAAAGAAACATGAGCCATGTTGCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: QRERRTLLPIIHRVP*ATQWERNMSHVASV
Trigger: AACAGAGGCAACATGGCTCATGTTTCTTTCCCACTGGGTAGCCCAAGGCACCCTATGGATAATTGGCAACAGAGTCCTTCTCTCCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS TCA 90 bp ACAGGAAATGGATTGAATGCTGGAGCTTGGGGAGGCAGAAAGCAATaGGCAGAAGAGCAAGGTAAGCCTGTAATACTGGGTGACAAAGGG +
Preference number: 5 (lower is better)
Translates to: TGNGLNAGAWGGRKQ*AEEQGKPVILGDKG
Trigger: CCCTTTGTCACCCAGTATTACAGGCTTACCTTGCTCTTCTGCTCATTGCTTTCTGCCTCCCCAAGCTCCAGCATTCAATCCATTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 90 bp ACCAAATCGCAGTGGAGAAGCAAAAGCAGTAGGCATCACAGGAAATaGATTGAATGCTGGAGCTTGGGGAGGCAGAAAGCAATGAGCAGA +
Preference number: 5 (lower is better)
Translates to: TKSQWRSKSSRHHRK*IECWSLGRQKAMSR
Trigger: TCTGCTCATTGCTTTCTGCCTCCCCAAGCTCCAGCATTCAATCCATTTCCTGTGATGCCTACTGCTTTTGCTTCTCCACTGCGATTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 90 bp GAGAATTCTTGGGACATATTAATAGAATCATGTCCCTTCTGGCTCTaGCTCTCCAGGCCCTCTGAGCTGTTTATTTCTGCTGTTGCTAGG +
Preference number: 5 (lower is better)
Translates to: ENSWDILIESCPFWL*LSRPSELFISAVAR
Trigger: CCTAGCAACAGCAGAAATAAACAGCTCAGAGGGCCTGGAGAGCCAGAGCCAGAAGGGACATGATTCTATTAATATGTCCCAAGAATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS GCA 90 bp ACATGGAACTCAGAGAGCGGAGCTGCACATTGTGGCATGTCTCCTTaGTTCTGTTTTTATCCACAGGAACTATTATGGGTGAATGGCTAT +
Preference number: 5 (lower is better)
Translates to: TWNSESGAAHCGMSP*FCFYPQELLWVNGY
Trigger: ATAGCCATTCACCCATAATAGTTCCTGTGGATAAAAACAGAAGCAAGGAGACATGCCACAATGTGCAGCTCCGCTCTCTGAGTTCCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 72 bp AGCTCTTGGATTTTGAGGAATGCGGGCTCCTGTTCTTaGCACATTGAAGGGAGGTCTCAAGGAGACAGGAGG +
Preference number: 6 (lower is better)
Translates to: SSWILRNAGSCS*HIEGRSQGDRR
Trigger: CCTCCTGTCTCCTTGAGACCTCCCTTCAATGTGCCAAGAACAGGAGCCCGCATTCCTCAAAATCCAAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 72 bp ATTTCCACTTCTCTCAAGAACCCTGCTACCAACTCTTaGGCCTCCGATCATCAGTGCCATAGGGCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: ISTSLKNPATNS*ASDHQCHRASR
Trigger: TCTGGAAGCCCTATGGCACTGATGATCGGAGGCCCAAGAGTTGGTAGCAGGGTTCTTGAGAGAAGTGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS TCA 72 bp GGATTGAATGCTGGAGCTTGGGGAGGCAGAAAGCAATaGGCAGAAGAGCAAGGTAAGCCTGTAATACTGGGT +
Preference number: 6 (lower is better)
Translates to: GLNAGAWGGRKQ*AEEQGKPVILG
Trigger: ACCCAGTATTACAGGCTTACCTTGCTCTTCTGCTCATTGCTTTCTGCCTCCCCAAGCTCCAGCATTCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS GCA 72 bp GTAATACTGGGTGACAAAGGGAGAGAAGGACTCTGTTaGCAATTATCCATAGGGTGCCTTGGGCTACCCAGT +
Preference number: 6 (lower is better)
Translates to: VILGDKGREGLC*QLSIGCLGLPS
Trigger: ACTGGGTAGCCCAAGGCACCCTATGGATAATTGGCAACAGAGTCCTTCTCTCCCTTTGTCACCCAGTATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 72 bp CCTCGTGACTGTGAACCCCTTGGTGGAAAGAAGCCCTaGGATCTAGGCACAGGAATATATGGCTTTGAGTTA +
Preference number: 6 (lower is better)
Translates to: PRDCEPLGGKKP*DLGTGIYGFEL
Trigger: TAACTCAAAGCCATATATTCCTGTGCCTAGATCCCAGGGCTTCTTTCCACCAAGGGGTTCACAGTCACGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 72 bp TTGCCAATTATCCATAGGGTGCCTTGGGCTACCCAGTaGGAAAGAAACATGAGCCATGTTGCCTCTGTTTGC +
Preference number: 6 (lower is better)
Translates to: LPIIHRVPWATQ*ERNMSHVASVC
Trigger: GCAAACAGAGGCAACATGGCTCATGTTTCTTTCCCACTGGGTAGCCCAAGGCACCCTATGGATAATTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 72 bp CAGTGGAGAAGCAAAAGCAGTAGGCATCACAGGAAATaGATTGAATGCTGGAGCTTGGGGAGGCAGAAAGCA +
Preference number: 6 (lower is better)
Translates to: QWRSKSSRHHRK*IECWSLGRQKA
Trigger: TGCTTTCTGCCTCCCCAAGCTCCAGCATTCAATCCATTTCCTGTGATGCCTACTGCTTTTGCTTCTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CAA 90 bp TCTTGGGCCTCCGATCATCAGTGCCATAGGGCTTCCAGAGAATTCTaGGGACATATTAATAGAATCATGTCCCTTCTGGCTCTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: SWASDHQCHRASREF*GHINRIMSLLALAL
Trigger: GAGAGCCAGAGCCAGAAGGGACATGATTCTATTAATATGTCCCAAGAATTCTCTGGAAGCCCTATGGCACTGATGATCGGAGGCCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS TCA 72 bp GTTAGTGTAAGAGGGTGTCTTGGAGCTCTTGGATTTTaGGGAATGCGGGCTCCTGTTCTTGGCACATTGAAG +
Preference number: 6 (lower is better)
Translates to: VSVRGCLGALGF*GMRAPVLGTLK
Trigger: CTTCAATGTGCCAAGAACAGGAGCCCGCATTCCTCAAAATCCAAGAGCTCCAAGACACCCTCTTACACTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS GCA 72 bp AGCAAAAGCAGTAGGCATCACAGGAAATGGATTGAATaGTGGAGCTTGGGGAGGCAGAAAGCAATGAGCAGA +
Preference number: 6 (lower is better)
Translates to: SKSSRHHRKWIE*WSLGRQKAMSR
Trigger: TCTGCTCATTGCTTTCTGCCTCCCCAAGCTCCAGCATTCAATCCATTTCCTGTGATGCCTACTGCTTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 72 bp TGGGACATATTAATAGAATCATGTCCCTTCTGGCTCTaGCTCTCCAGGCCCTCTGAGCTGTTTATTTCTGCT +
Preference number: 6 (lower is better)
Translates to: WDILIESCPFWL*LSRPSELFISA
Trigger: AGCAGAAATAAACAGCTCAGAGGGCCTGGAGAGCCAGAGCCAGAAGGGACATGATTCTATTAATATGTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 72 bp AAAAGCAGTAGGCATCACAGGAAATGGATTGAATGCTaGAGCTTGGGGAGGCAGAAAGCAATGAGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: KSSRHHRKWIEC*SLGRQKAMSRR
Trigger: TCTTCTGCTCATTGCTTTCTGCCTCCCCAAGCTCCAGCATTCAATCCATTTCCTGTGATGCCTACTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS CCA 72 bp CCGATCATCAGTGCCATAGGGCTTCCAGAGAATTCTTaGGACATATTAATAGAATCATGTCCCTTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: PIISAIGLPENS*DILIESCPFWL
Trigger: GAGCCAGAAGGGACATGATTCTATTAATATGTCCCAAGAATTCTCTGGAAGCCCTATGGCACTGATGATCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4
CDS TCA 72 bp CTTGCTTCTGTTTTTATCCACAGGAACTATTATGGGTaGATGGCTATGCCCTGCAAGCCCATTTTCAGTACA +
Preference number: 6 (lower is better)
Translates to: LASVFIHRNYYG*MAMPCKPIFST
Trigger: TGTACTGAAAATGGGCTTGCAGGGCATAGCCATTCACCCATAATAGTTCCTGTGGATAAAAACAGAAGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040002.4