Pregenerated sensors for PRR30 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042888Ensembl transcript IDs: ENSMUST00000057718.11, ENSMUST00000187304.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCTGCGGCGCCCCACATaGTCCACCAGGGCTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VPRVQGRRTHLASSQPALLRRPT*STRAWV Trigger: CACCCAAGCCCTGGTGGACCATGTGGGGCGCCGCAG...GAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCAATTTGGGGGCAGCAGATaGAAAGCCCTGGCCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PRVQGRRTHLASSQPALQFGGSR*KALAWP Trigger: GGGCCAGGCCAGGGCTTTGCATCTGCTGCCCCCAAA...TTGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCAATGGTCCACCAGGGCTTaGGTGAGGGTCCCTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: PRVQGRRTHLASSQPALQWSTRA*VRVPES Trigger: GGACTCAGGGACCCTCACCCAAGCCCTGGTGGACCA...TTGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CAAACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCGGGGTACTCCACGACTaGGGCATGGCCGGGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: QTPQGVPRVQGRRTHLASGVLHD*GMAGCA Trigger: GGCACACCCGGCCATGCCCCAGTCGTGGAGTACCCC...GGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | AAACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCATGCAAAGCCCTGGCCTaGCCCCGAGGCAGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KLHKGFPGFRAGEHTWLPCKALA*PRGRRR Trigger: CCTCCGCCTGCCTCGGGGCCAGGCCAGGGCTTTGCA...TGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | TCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCAAATCCTTGGAGAAGGTaGGCTGGGGACCGGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: SQGSGQENTPGFQPASPPNPWRR*AGDRGS Trigger: ACTTCCCCGGTCCCCAGCTCACCTTCTCCAAGGATT...TGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | GTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCGGGTCCCTGAGTCCTTaGATTCTGCAGGGTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: VPRVQGRRTHLASSQPALGSLSP*ILQGPP Trigger: AGGTGGACCCTGCAGAATTCAAGGACTCAGGGACCC...GAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGTGGAGGGCCTCTTCCTaGGACTCTACTCCCACCGGA | + |
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Preference number: 4 (lower is better) Translates to: PQGVPRVQGRRTHLASSQWRASS*DSTPTG Trigger: TCCGGTGGGAGTAGAGTCTCAGGAAGAGGCCCTCCA...CTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | AAACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCATCCACGACTGGGGCATaGCCGGGTGTGCCGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KLHKGFPGFRAGEHTWLPSTTGA*PGVPSH Trigger: GTGGCTCGGCACACCCGGCCATGCCCCAGTCGTGGA...TGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | AGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTTCGCTGTGCAAAGCCCTGGCCTaGCCCCGAGGCAGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SPGREGRVWRWCSRGSSLCKALA*PRGRRR Trigger: CCTCCGCCTGCCTCGGGGCCAGGCCAGGGCTTTGCA...CAGCGAAGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | AACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGGAGAGGAGGAGCCGGTaGGAGGGGGAGACACACAGA | + |
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Preference number: 4 (lower is better) Translates to: NSTRGSQGSGQENTPGFQERRSR*EGETHR Trigger: TCTGTGTGTCTCCCCCTCTCACCGGCTCCTCCTCTC...CTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCAATTGATGCTTCCGGACTaGGGCCACTGCCATGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: PRVQGRRTHLASSQPALQLMLPD*GHCHVC Trigger: GCAAACATGGCAGTGGCCTCAGTCCGGAAGCATCAA...TTGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGGGGTCCCTGAGTCCTTaGATTCTGCAGGGTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: PQGVPRVQGRRTHLASSQGSLSP*ILQGPP Trigger: AGGTGGACCCTGCAGAATTCAAGGACTCAGGGACCC...CTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | GTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCAGTCACAGACCTCTTTaGGACAGAAGGCCCGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: VPRVQGRRTHLASSQPALSHRPL*DRRPGL Trigger: AAGGCCGGGCCTTCTGTCTCAAAGAGGTCTGTGACT...GAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCAGGCAGAGGAAAGTaGGAAGAAGGGAGGGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: QGVPRVQGRRTHLASSQPAGRGK*EEGRVG Trigger: TCCGACCCTCCCTTCTTCCCACTTTCCTCTGCCTGC...TGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTCTCTTCAACTAGGGGAGAGCAAACTCCACAAGGGGTTCCCAGGGTTCTGCGGCGCCCCACATaGTCCACCAGGGCTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: PLVSSTRGEQTPQGVPRVLRRPT*STRAWV Trigger: CACCCAAGCCCTGGTGGACCATGTGGGGCGCCGCAG...AACCCTGGGAACCCCTTGTGGAGTTTGCTCTCCCCTAGTTGAAGAGACCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | AGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTTCGCTGTCCACGACTGGGGCATaGCCGGGTGTGCCGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SPGREGRVWRWCSRGSSLSTTGA*PGVPSH Trigger: GTGGCTCGGCACACCCGGCCATGCCCCAGTCGTGGA...CAGCGAAGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTCTCTTCAACTAGGGGAGAGCAAACTCCACAAGGGGTTCCCAGGGTTGGGGTACTCCACGACTaGGGCATGGCCGGGTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PLVSSTRGEQTPQGVPRVGVLHD*GMAGCA Trigger: GGCACACCCGGCCATGCCCCAGTCGTGGAGTACCCC...AACCCTGGGAACCCCTTGTGGAGTTTGCTCTCCCCTAGTTGAAGAGACCAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | GTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCTCTTGTACTTGGGGGTaGGACAAGATGGGGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: VPRVQGRRTHLASSQPALSCTWG*DKMGCG Trigger: TCCGCACCCCATCTTGTCCCACCCCCAAGTACAAGA...GAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CAAACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCTGGAGGGCCTCTTCCTaGGACTCTACTCCCACCGGA | + |
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Preference number: 4 (lower is better) Translates to: QTPQGVPRVQGRRTHLASWRASS*DSTPTG Trigger: TCCGGTGGGAGTAGAGTCTCAGGAAGAGGCCCTCCA...GGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCAAGAAGGGAGGGTCGGATaGGGACAAAGAGATGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: PRVQGRRTHLASSQPALQEGRVG*GQRDAK Trigger: CTTAGCATCTCTTTGTCCCCATCCGACCCTCCCTTC...TTGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | AACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGAGGGTCCACCTTGCTTaGCACACATACCCCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: NSTRGSQGSGQENTPGFQRVHLA*HTYPCP Trigger: GGGGCAGGGGTATGTGTGCCAAGCAAGGTGGACCCT...CTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGGCACACTAGACATATaGGGTACTCCACGACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QGVPRVQGRRTHLASSQPGTLDI*GTPRLG Trigger: CCCCAGTCGTGGAGTACCCCATATGTCTAGTGTGCC...TGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCAAGATGGGGTGCGGATCTaGAGGCACACTAGACATATG | + |
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Preference number: 4 (lower is better) Translates to: PRVQGRRTHLASSQPALQDGVRI*RHTRHM Trigger: CATATGTCTAGTGTGCCTCCAGATCCGCACCCCATC...TTGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | TCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCACTGGCTGGGTTTTGGTaGTTGAAGGTCTATAGACCG | + |
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Preference number: 4 (lower is better) Translates to: SQGSGQENTPGFQPASPPLAGFW*LKVYRP Trigger: CGGTCTATAGACCTTCAATCACCAAAACCCAGCCAG...TGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | GTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCTGGCTGGGTTTTGGTaGTTGAAGGTCTATAGACCG | + |
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Preference number: 4 (lower is better) Translates to: VPRVQGRRTHLASSQPALLAGFW*LKVYRP Trigger: CGGTCTATAGACCTTCAATCACCAAAACCCAGCCAG...GAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGAAGGGAGGGTCGGATaGGGACAAAGAGATGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: QGVPRVQGRRTHLASSQPEGRVG*GQRDAK Trigger: CTTAGCATCTCTTTGTCCCCATCCGACCCTCCCTTC...TGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CAAACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCGCAGGCAGAGGAAAGTaGGAAGAAGGGAGGGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: QTPQGVPRVQGRRTHLASAGRGK*EEGRVG Trigger: TCCGACCCTCCCTTCTTCCCACTTTCCTCTGCCTGC...GGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | AAACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAAGGGTCCACCTTGCTTaGCACACATACCCCTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: KLHKGFPGFRAGEHTWLPRVHLA*HTYPCP Trigger: GGGGCAGGGGTATGTGTGCCAAGCAAGGTGGACCCT...TGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | AGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTTCGCTGTGGTCCACCAGGGCTTaGGTGAGGGTCCCTGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SPGREGRVWRWCSRGSSLWSTRA*VRVPES Trigger: GGACTCAGGGACCCTCACCCAAGCCCTGGTGGACCA...CAGCGAAGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGGATGGGGTGCGGATCTaGAGGCACACTAGACATATG | + |
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Preference number: 4 (lower is better) Translates to: PQGVPRVQGRRTHLASSQDGVRI*RHTRHM Trigger: CATATGTCTAGTGTGCCTCCAGATCCGCACCCCATC...CTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTGAGAGGAGGAGCCGGTaGGAGGGGGAGACACACAGA | + |
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Preference number: 4 (lower is better) Translates to: LRSPGREGRVWRWCSRGSERRSR*EGETHR Trigger: TCTGTGTGTCTCCCCCTCTCACCGGCTCCTCCTCTC...AGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR GCA 90 bp | GGGTGCCTCTGGTCTCTTCAACTAGGGGAGAGCAAACTCCACAAGGGGTTCCCACTGCAGGGTCCACCTTaGTTGGCACACATACCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GCLWSLQLGESKLHKGFPLQGPP*LAHIPL Trigger: CAGGGGTATGTGTGCCAAGCAAGGTGGACCCTGCAG...TGGGAACCCCTTGTGGAGTTTGCTCTCCCCTAGTTGAAGAGACCAGAGGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR GCA 90 bp | CTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTTTTGGGGGCAGCAGATaGAAAGCCCTGGCCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LRSPGREGRVWRWCSRGSFGGSR*KALAWP Trigger: GGGCCAGGCCAGGGCTTTGCATCTGCTGCCCCCAAA...AGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | GGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGACACAGGGTAGTAGTTaGGGGAAGGCAAGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLRSPGREGRVWRWCSRGTQGSS*GKASSW Trigger: CCAGCTGCTTGCCTTCCCTCAACTACTACCCTGTGT...CCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CAAACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCACCTGTCTTGGTTCCTaGAGTAGAGACCTGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: QTPQGVPRVQGRRTHLASTCLGS*SRDLEH Trigger: GTGTTCCAGGTCTCTACTTCAGGAACCAAGACAGGT...GGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | AACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGACCTGTCTTGGTTCCTaGAGTAGAGACCTGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: NSTRGSQGSGQENTPGFQTCLGS*SRDLEH Trigger: GTGTTCCAGGTCTCTACTTCAGGAACCAAGACAGGT...CTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGGTCTCTTCAACTAGGGGAGAGCAAACTCCACAAGGGGTTCCCAGGGTTAGTCACAGACCTCTTTaGGACAGAAGGCCCGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: PLVSSTRGEQTPQGVPRVSHRPL*DRRPGL Trigger: AAGGCCGGGCCTTCTGTCTCAAAGAGGTCTGTGACT...AACCCTGGGAACCCCTTGTGGAGTTTGCTCTCCCCTAGTTGAAGAGACCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR GCA 90 bp | CTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTCTGCAGGGTCCACCTTaGTTGGCACACATACCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LRSPGREGRVWRWCSRGSLQGPP*LAHIPL Trigger: CAGGGGTATGTGTGCCAAGCAAGGTGGACCCTGCAG...AGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CAAGGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAAATCCTTGGAGAAGGTaGGCTGGGGACCGGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QGLRSPGREGRVWRWCSRNPWRR*AGDRGS Trigger: ACTTCCCCGGTCCCCAGCTCACCTTCTCCAAGGATT...TCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTACACAGGGTAGTAGTTaGGGGAAGGCAAGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LRSPGREGRVWRWCSRGSTQGSS*GKASSW Trigger: CCAGCTGCTTGCCTTCCCTCAACTACTACCCTGTGT...AGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTGGCACACTAGACATATaGGGTACTCCACGACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LRSPGREGRVWRWCSRGSGTLDI*GTPRLG Trigger: CCCCAGTCGTGGAGTACCCCATATGTCTAGTGTGCC...AGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | AACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGACCTGGAACACTGGCTaGGTTTTGGTGATTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSTRGSQGSGQENTPGFQTWNTG*VLVIEG Trigger: ACCTTCAATCACCAAAACCCAGCCAGTGTTCCAGGT...CTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CAAGGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGATTGATGCTTCCGGACTaGGGCCACTGCCATGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLRSPGREGRVWRWCSRLMLPD*GHCHVC Trigger: GCAAACATGGCAGTGGCCTCAGTCCGGAAGCATCAA...TCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | AACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGAGTGTGCCGGTGATTTaGACTGATTCTTGGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSTRGSQGSGQENTPGFQSVPVI*TDSWIV Trigger: CACAATCCAAGAATCAGTTCAAATCACCGGCACACT...CTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CAAGGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGATCTTGTACTTGGGGGTaGGACAAGATGGGGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGLRSPGREGRVWRWCSRSCTWG*DKMGCG Trigger: TCCGCACCCCATCTTGTCCCACCCCCAAGTACAAGA...TCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | GGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGCCTGAAGTAGAGACCTaGAACACTGGCTGGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLRSPGREGRVWRWCSRGPEVET*NTGWVL Trigger: CAAAACCCAGCCAGTGTTCCAGGTCTCTACTTCAGG...CCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CAAGGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGAGAGATGGAGTGTaGAGAGGGGAGTTTTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: QGLRSPGREGRVWRWCSRGRDGV*RGEFFT Trigger: GGTGAAAAACTCCCCTCTCCACACTCCATCTCTCCC...TCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTCTCTTCAACTAGGGGAGAGCAAACTCCACAAGGGGTTCCCAGGGTTACCTGGAACACTGGCTaGGTTTTGGTGATTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLVSSTRGEQTPQGVPRVTWNTG*VLVIEG Trigger: ACCTTCAATCACCAAAACCCAGCCAGTGTTCCAGGT...AACCCTGGGAACCCCTTGTGGAGTTTGCTCTCCCCTAGTTGAAGAGACCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | AGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTTCGCTGAGTGTGCCGGTGATTTaGACTGATTCTTGGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGREGRVWRWCSRGSSLSVPVI*TDSWIV Trigger: CACAATCCAAGAATCAGTTCAAATCACCGGCACACT...CAGCGAAGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | GGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGCTGATTCTTGGATTGTaGATTTTTGTCGCTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLRSPGREGRVWRWCSRGLILGL*IFVAGG Trigger: CCCTCCAGCGACAAAAATCCACAATCCAAGAATCAG...CCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGGTCTCTTCAACTAGGGGAGAGCAAACTCCACAAGGGGTTCCCAGGGTTCTGATTCTTGGATTGTaGATTTTTGTCGCTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVSSTRGEQTPQGVPRVLILGL*IFVAGG Trigger: CCCTCCAGCGACAAAAATCCACAATCCAAGAATCAG...AACCCTGGGAACCCCTTGTGGAGTTTGCTCTCCCCTAGTTGAAGAGACCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CCA 90 bp | CAAGGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGACCTGAAGTAGAGACCTaGAACACTGGCTGGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLRSPGREGRVWRWCSRPEVET*NTGWVL Trigger: CAAAACCCAGCCAGTGTTCCAGGTCTCTACTTCAGG...TCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | AGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTTCGCTGGCCGGTGATTTGAACTaGTTCTTGGATTGTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGREGRVWRWCSRGSSLAGDLN*FLDCGF Trigger: AAATCCACAATCCAAGAATCAGTTCAAATCACCGGC...CAGCGAAGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGGTCTCTTCAACTAGGGGAGAGCAAACTCCACAAGGGGTTCCCAGGGTTGCCGGTGATTTGAACTaGTTCTTGGATTGTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLVSSTRGEQTPQGVPRVAGDLN*FLDCGF Trigger: AAATCCACAATCCAAGAATCAGTTCAAATCACCGGC...AACCCTGGGAACCCCTTGTGGAGTTTGCTCTCCCCTAGTTGAAGAGACCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR TCA 90 bp | CTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTGTTTGCTTGTTATTCTaGATCCTTGGAGAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRSPGREGRVWRWCSRGSVCLLF*ILGEGE Trigger: CTCACCTTCTCCAAGGATTCAGAATAACAAGCAAAC...AGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS GCA 90 bp | TACTCCACGACTGGGGCATGGCCGGGTGTGCCGAGCCACAGGCGCTaGAGAAACTGTATCTGCAGGTCTCGTGCAATTCTGCGGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: YSTTGAWPGVPSHRR*RNCICRSRAILRRP Trigger: GGGGCGCCGCAGAATTGCACGAGACCTGCAGATACAGTTTCTGCAGCGCCTGTGGCTCGGCACACCCGGCCATGCCCCAGTCGTGGAGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS CCA 90 bp | GGGTGGGACAAGATGGGGTGCGGATCTGGAGGCACACTAGACATATaGGGTACTCCACGACTGGGGCATGGCCGGGTGTGCCGAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GWDKMGCGSGGTLDI*GTPRLGHGRVCRAT Trigger: TGTGGCTCGGCACACCCGGCCATGCCCCAGTCGTGGAGTACCCCATATGTCTAGTGTGCCTCCAGATCCGCACCCCATCTTGTCCCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCAAGGGTCCCTGAGTCCTaGAATTCTGCAGGGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SQGSGQENTPGFQPASPPRVPES*NSAGST Trigger: GGTGGACCCTGCAGAATTCAAGGACTCAGGGACCCT...TGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | CCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCAAGAGTCACAGACCTCTTaGAGACAGAAGGCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRVQGRRTHLASSQPALQESQTS*RQKARP Trigger: AGGCCGGGCCTTCTGTCTCAAAGAGGTCTGTGACTC...TTGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS GCA 90 bp | ACACTAGACATATGGGGTACTCCACGACTGGGGCATGGCCGGGTGTaGCGAGCCACAGGCGCTGCAGAAACTGTATCTGCAGGTCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TLDIWGTPRLGHGRV*RATGAAETVSAGLV Trigger: CACGAGACCTGCAGATACAGTTTCTGCAGCGCCTGTGGCTCGGCACACCCGGCCATGCCCCAGTCGTGGAGTACCCCATATGTCTAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS CCA 90 bp | ATCTGGAGGCACACTAGACATATGGGGTACTCCACGACTGGGGCATaGCCGGGTGTGCCGAGCCACAGGCGCTGCAGAAACTGTATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IWRHTRHMGYSTTGA*PGVPSHRRCRNCIC Trigger: GCAGATACAGTTTCTGCAGCGCCTGTGGCTCGGCACACCCGGCCATGCCCCAGTCGTGGAGTACCCCATATGTCTAGTGTGCCTCCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | CCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCAAAGGCCACTGCCATGTTaGCTTGTTATTCTGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRVQGRRTHLASSQPALQRPLPC*LVILNP Trigger: AGGATTCAGAATAACAAGCAAACATGGCAGTGGCCT...TTGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | AGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTTCGCTGAGGGTCCCTGAGTCCTaGAATTCTGCAGGGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SPGREGRVWRWCSRGSSLRVPES*NSAGST Trigger: GGTGGACCCTGCAGAATTCAAGGACTCAGGGACCCT...CAGCGAAGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS TCA 90 bp | AGACCGGAGGCTCCGGGCCTGGAAGAGTGTGCCGGTGATTTGAACTaGTTCTTGGATTGTGGATTTTTGTCGCTGGAGGGCCTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPEAPGLEECAGDLN*FLDCGFLSLEGLFL Trigger: CAGGAAGAGGCCCTCCAGCGACAAAAATCCACAATCCAAGAATCAGTTCAAATCACCGGCACACTCTTCCAGGCCCGGAGCCTCCGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | CAAACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCCAAAGAGATGCTAAGTaGGGGGCAGGGGAATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: QTPQGVPRVQGRRTHLASQRDAK*GAGEFT Trigger: TGTGAATTCCCCTGCCCCCAACTTAGCATCTCTTTG...GGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGCCAGCCCTCCAGAACTGATTCTTGGATaGTGGATTTTTGTCGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQGSGQENTPGFQPASPPELILG*WIFVAG Trigger: TCCAGCGACAAAAATCCACAATCCAAGAATCAGTTC...TGGAGGGCTGGCTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | GGGTGCCTCTGGTCTCTTCAACTAGGGGAGAGCAAACTCCACAAGGGGTTCCCACAAAGAGATGCTAAGTaGGGGGCAGGGGAATTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GCLWSLQLGESKLHKGFPQRDAK*GAGEFT Trigger: TGTGAATTCCCCTGCCCCCAACTTAGCATCTCTTTG...TGGGAACCCCTTGTGGAGTTTGCTCTCCCCTAGTTGAAGAGACCAGAGGCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | CCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGCCAGGAACAAAGTCAGAATTaGAGTCCGAAGAGAAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PQGVPRVQGRRTHLASSQEQSQN*SPKRSE Trigger: CTCACTTCTCTTCGGACTCAAATTCTGACTTTGTTC...CTGGCTGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | CAAGGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGAGTCACAGACCTCTTaGAGACAGAAGGCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QGLRSPGREGRVWRWCSRESQTS*RQKARP Trigger: AGGCCGGGCCTTCTGTCTCAAAGAGGTCTGTGACTC...TCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS TCA 90 bp | TCTATAGACCGGAGGCTCCGGGCCTGGAAGAGTGTGCCGGTGATTTaGACTGATTCTTGGATTGTGGATTTTTGTCGCTGGAGGGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SIDRRLRAWKSVPVI*TDSWIVDFCRWRAS Trigger: AGAGGCCCTCCAGCGACAAAAATCCACAATCCAAGAATCAGTTCAAATCACCGGCACACTCTTCCAGGCCCGGAGCCTCCGGTCTATAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | AGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTTCGCTGTTGGATTGTGGATTTTaGTCGCTGGAGGGCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGREGRVWRWCSRGSSLLDCGF*SLEGLF Trigger: GAAGAGGCCCTCCAGCGACAAAAATCCACAATCCAA...CAGCGAAGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | CTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGTCTTGTTATTCTGAATCCTaGGAGAAGGTGAGCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRSPGREGRVWRWCSRGSCYSES*EKVSWG Trigger: TCCCCAGCTCACCTTCTCCAAGGATTCAGAATAACA...AGACCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | GGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGAGGCCACTGCCATGTTaGCTTGTTATTCTGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLRSPGREGRVWRWCSRGRPLPC*LVILNP Trigger: AGGATTCAGAATAACAAGCAAACATGGCAGTGGCCT...CCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | AAACTCCACAAGGGGTTCCCAGGGTTCAGGGCAGGAGAACACACCTGGCTTCCAGAACTGATTCTTGGATaGTGGATTTTTGTCGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KLHKGFPGFRAGEHTWLPELILG*WIFVAG Trigger: TCCAGCGACAAAAATCCACAATCCAAGAATCAGTTC...TGGAAGCCAGGTGTGTTCTCCTGCCCTGAACCCTGGGAACCCCTTGTGGAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS-3UTR CAA 90 bp | GGTCTGAGAAGTCCTGGTAGGGAAGGTAGAGTTTGGAGGTGGTGTTCCAGAGGGGAACAAAGTCAGAATTaGAGTCCGAAGAGAAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLRSPGREGRVWRWCSRGEQSQN*SPKRSE Trigger: CTCACTTCTCTTCGGACTCAAATTCTGACTTTGTTC...CCCTCTGGAACACCACCTCCAAACTCTACCTTCCCTACCAGGACTTCTCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS CAA 90 bp | CGCCCCACATGGTCCACCAGGGCTTGGGTGAGGGTCCCTGAGTCCTaGAATTCTGCAGGGTCCACCTTGCTTGGCACACATACCCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPTWSTRAWVRVPES*NSAGSTLLGTHTPA Trigger: GGCAGGGGTATGTGTGCCAAGCAAGGTGGACCCTGCAGAATTCAAGGACTCAGGGACCCTCACCCAAGCCCTGGTGGACCATGTGGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS CCA 72 bp | GCAATTCTGCGGCGCCCCACATGGTCCACCAGGGCTTaGGTGAGGGTCCCTGAGTCCTTGAATTCTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AILRRPTWSTRA*VRVPESLNSAG Trigger: CCCTGCAGAATTCAAGGACTCAGGGACCCTCACCCAAGCCCTGGTGGACCATGTGGGGCGCCGCAGAATTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS TCA 72 bp | CCCCACATGGTCCACCAGGGCTTGGGTGAGGGTCCCTaGGTCCTTGAATTCTGCAGGGTCCACCTTGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PHMVHQGLGEGP*VLEFCRVHLAW Trigger: CCAAGCAAGGTGGACCCTGCAGAATTCAAGGACTCAGGGACCCTCACCCAAGCCCTGGTGGACCATGTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS GCA 72 bp | ACTGGGGCATGGCCGGGTGTGCCGAGCCACAGGCGCTaGAGAAACTGTATCTGCAGGTCTCGTGCAATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TGAWPGVPSHRR*RNCICRSRAIL Trigger: CAGAATTGCACGAGACCTGCAGATACAGTTTCTGCAGCGCCTGTGGCTCGGCACACCCGGCCATGCCCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS GCA 72 bp | ATATGGGGTACTCCACGACTGGGGCATGGCCGGGTGTaGCGAGCCACAGGCGCTGCAGAAACTGTATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: IWGTPRLGHGRV*RATGAAETVSA Trigger: TGCAGATACAGTTTCTGCAGCGCCTGTGGCTCGGCACACCCGGCCATGCCCCAGTCGTGGAGTACCCCATAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS CCA 72 bp | AAGATGGGGTGCGGATCTGGAGGCACACTAGACATATaGGGTACTCCACGACTGGGGCATGGCCGGGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KMGCGSGGTLDI*GTPRLGHGRVC Trigger: GCACACCCGGCCATGCCCCAGTCGTGGAGTACCCCATATGTCTAGTGTGCCTCCAGATCCGCACCCCATCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
||
| CDS CAA 72 bp | TGGTCCACCAGGGCTTGGGTGAGGGTCCCTGAGTCCTaGAATTCTGCAGGGTCCACCTTGCTTGGCACACAT | + |
|
Preference number: 6 (lower is better) Translates to: WSTRAWVRVPES*NSAGSTLLGTH Trigger: ATGTGTGCCAAGCAAGGTGGACCCTGCAGAATTCAAGGACTCAGGGACCCTCACCCAAGCCCTGGTGGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
||
| CDS TCA 72 bp | CCGGCCTTTGGGGATGCAGCGACCTGTCTTGGTTCCTaGAGTAGAGACCTGGAACACTGGCTGGGTTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PAFGDAATCLGS*SRDLEHWLGFG Trigger: ACCAAAACCCAGCCAGTGTTCCAGGTCTCTACTTCAGGAACCAAGACAGGTCGCTGCATCCCCAAAGGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS CAA 90 bp | TCTTTGAGACAGAAGGCCCGGCCTTTGGGGATGCAGCGACCTGTCTaGGTTCCTGAAGTAGAGACCTGGAACACTGGCTGGGTTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLRQKARPLGMQRPV*VPEVETWNTGWVLV Trigger: CACCAAAACCCAGCCAGTGTTCCAGGTCTCTACTTCAGGAACCAAGACAGGTCGCTGCATCCCCAAAGGCCGGGCCTTCTGTCTCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
||
| CDS TCA 72 bp | AGTAGAGACCTGGAACACTGGCTGGGTTTTGGTGATTaGAGGTCTATAGACCGGAGGCTCCGGGCCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SRDLEHWLGFGD*RSIDRRLRAWK Trigger: CTTCCAGGCCCGGAGCCTCCGGTCTATAGACCTTCAATCACCAAAACCCAGCCAGTGTTCCAGGTCTCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS TCA 72 bp | GCTCCGGGCCTGGAAGAGTGTGCCGGTGATTTGAACTaGTTCTTGGATTGTGGATTTTTGTCGCTGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: APGLEECAGDLN*FLDCGFLSLEG Trigger: GCCCTCCAGCGACAAAAATCCACAATCCAAGAATCAGTTCAAATCACCGGCACACTCTTCCAGGCCCGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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| CDS CCA 72 bp | ATGCAGCGACCTGTCTTGGTTCCTGAAGTAGAGACCTaGAACACTGGCTGGGTTTTGGTGATTGAAGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: MQRPVLVPEVET*NTGWVLVIEGL Trigger: TAGACCTTCAATCACCAAAACCCAGCCAGTGTTCCAGGTCTCTACTTCAGGAACCAAGACAGGTCGCTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057718.11 ENSMUST00000187304.2 |
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