Pregenerated sensors for PRR29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009210Ensembl transcript IDs: ENSMUST00000009354.10, ENSMUST00000106816.8, ENSMUST00000185986.7, ENSMUST00000188561.7, ENSMUST00000190268.2, ENSMUST00000190795.7
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTaGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGC | + |
|
Preference number: 1 (lower is better) Translates to: QNSQHKMAVESLMRA*GWGRRVGKKGQHGC Trigger: GCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR CCA 90 bp | AGGACATTCTGTTCACACCCGACCCTGGGGACCTCATGCTGCTCCTaGTTGAATCAGGACACGGCCCTGACTCTCCTTTCTGCCAACACT | + |
|
Preference number: 1 (lower is better) Translates to: RTFCSHPTLGTSCCS*LNQDTALTLLSANT Trigger: AGTGTTGGCAGAAAGGAGAGTCAGGGCCGTGTCCTGATTCAACCAGGAGCAGCATGAGGTCCCCAGGGTCGGGTGTGAACAGAATGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| 3UTR TCA 90 bp | ATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGCAGAAGGTaGCAAGGCCTGGTGTACATCTATCTTCATGGCAGGCTCTCCGCA | + |
|
Preference number: 1 (lower is better) Translates to: MGAELLQGLASLCRR*QGLVYIYLHGRLSA Trigger: TGCGGAGAGCCTGCCATGAAGATAGATGTACACCAGGCCTTGTCACCTTCTGCACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188561.7 |
||
| 3UTR CCA 90 bp | AGACACACAGCCTTCATCATCCCAGAGAGAGGGGCTGAGACCAGCTaGGCTCTGGTATCAGGGCCTTATAGGGAAACAGAGGATCAATTG | + |
|
Preference number: 1 (lower is better) Translates to: RHTAFIIPERGAETS*ALVSGPYRETEDQL Trigger: CAATTGATCCTCTGTTTCCCTATAAGGCCCTGATACCAGAGCCCAGCTGGTCTCAGCCCCTCTCTCTGGGATGATGAAGGCTGTGTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| 3UTR CCA 90 bp | ATAGGGAAACAGAGGATCAATTGGTTTTGCGTGGCTTCTGGGTCATaGTTGGGCTTAAAGGAGCCTTTACTCCAGAACAGCCAGCACAAA | + |
|
Preference number: 1 (lower is better) Translates to: IGKQRINWFCVASGS*LGLKEPLLQNSQHK Trigger: TTTGTGCTGGCTGTTCTGGAGTAAAGGCTCCTTTAAGCCCAACCATGACCCAGAAGCCACGCAAAACCAATTGATCCTCTGTTTCCCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR-3UTR TCA 90 bp | GGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCTCACTGTGCAGAAGGTaGCAAGGCCTGGTGTACATC | + |
|
Preference number: 2 (lower is better) Translates to: GVGGAEWVRRASMGAELLSLCRR*QGLVYI Trigger: GATGTACACCAGGCCTTGTCACCTTCTGCACAGTGA...GAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR-3UTR GCA 90 bp | ATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTaGAGAGTTGCTCCAGGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: MAVESLMRAWGWGRRVGKKGQHG*RVAPGF Trigger: AAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTT...CTTACCCACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR-3UTR TCA 90 bp | GGAGCCTCTGCATCCCCAGACATCTACCCACACCGTTTAGGAGCAAAGTATTTCGAGGCTCAAGGGAGCTaGATCCGCTGCAGGGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: GASASPDIYPHRLGAKYFEAQGS*IRCRGL Trigger: GAGGCCCCTGCAGCGGATTCAGCTCCCTTGAGCCTC...GAAATACTTTGCTCCTAAACGGTGTGGGTAGATGTCTGGGGATGCAGAGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCTGGGCCCCTCTCCATCCATGCTGCCCTCTGGGAGTCTTAAGGAGTTTGGAGAAGGGCCAGCATGGGTaGAGAGTTGCTCCAGGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SWAPLHPCCPLGVLRSLEKGQHG*RVAPGF Trigger: AAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTT...CTCCAAACTCCTTAAGACTCCCAGAGGGCAGCATGGATGGAGAGGGGCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185986.7 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGACCAGCTGGGCTCTGGTATCAGGGCCTTATAGGGAAACAGAGGATCAAAGCCTGATGAGGGCTTaGGGTTGGGGGCGCAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: AETSWALVSGPYRETEDQSLMRA*GWGRRV Trigger: CACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCT...TTGATCCTCTGTTTCCCTATAAGGCCCTGATACCAGAGCCCAGCTGGTCTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| 3UTR CAA 90 bp | ACATTCTGTTCACACCCGACCCTGGGGACCTCATGCTGCTCCTGGTaGAATCAGGACACGGCCCTGACTCTCCTTTCTGCCAACACTAAG | + |
|
Preference number: 2 (lower is better) Translates to: TFCSHPTLGTSCCSW*NQDTALTLLSANTK Trigger: CTTAGTGTTGGCAGAAAGGAGAGTCAGGGCCGTGTCCTGATTCAACCAGGAGCAGCATGAGGTCCCCAGGGTCGGGTGTGAACAGAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTCACTGTGCAGAAGGTaGCAAGGCCTGGTGTACATC | + |
|
Preference number: 2 (lower is better) Translates to: WVRRASMGAELLQGLASLSLCRR*QGLVYI Trigger: GATGTACACCAGGCCTTGTCACCTTCTGCACAGTGA...CAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGGTCATGGTTGGGCTTAAAGGAGCCTTTACTCCAGAACAGCCAGCACAAAAGCCTGATGAGGGCTTaGGGTTGGGGGCGCAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SGSWLGLKEPLLQNSQHKSLMRA*GWGRRV Trigger: CACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCT...TTTGTGCTGGCTGTTCTGGAGTAAAGGCTCCTTTAAGCCCAACCATGACCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR-3UTR GCA 90 bp | TTACTCCAGAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGGAAGGGCCAGCATGGGTaGAGAGTTGCTCCAGGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLQNSQHKMAVESLMRAWKGQHG*RVAPGF Trigger: AAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTT...CCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTCTGGAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR-3UTR TCA 90 bp | TCCCCAGACATCTACCCACACCGTTTAGGAGCAAAGTATTTCCTCTTAAGGTCCATCAGGACACGGCCCTaGCTCTCCTTTCTGCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: SPDIYPHRLGAKYFLLRSIRTRP*LSFLPT Trigger: TGTTGGCAGAAAGGAGAGTCAGGGCCGTGTCCTGAT...GGACCTTAAGAGGAAATACTTTGCTCCTAAACGGTGTGGGTAGATGTCTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCATGCTGCCCTCTGGGAGTCTTAAGGAGTTTGGAGATGTGAGCTATCCTTTTTCACTGTGCAGAAGGTaGCAAGGCCTGGTGTACATC | + |
|
Preference number: 2 (lower is better) Translates to: SMLPSGSLKEFGDVSYPFSLCRR*QGLVYI Trigger: GATGTACACCAGGCCTTGTCACCTTCTGCACAGTGA...AAAAGGATAGCTCACATCTCCAAACTCCTTAAGACTCCCAGAGGGCAGCATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185986.7 |
||
| 3UTR CAA 90 bp | GGGAAACAGAGGATCAATTGGTTTTGCGTGGCTTCTGGGTCATGGTaGGGCTTAAAGGAGCCTTTACTCCAGAACAGCCAGCACAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: GKQRINWFCVASGSW*GLKEPLLQNSQHKM Trigger: CATTTTGTGCTGGCTGTTCTGGAGTAAAGGCTCCTTTAAGCCCAACCATGACCCAGAAGCCACGCAAAACCAATTGATCCTCTGTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR-3UTR GCA 90 bp | GGAGCAAAGTATTTCCTCTTAAGGTCCCATGAGGTGAAGGACATTCTGTTCACAACCCTGGGGACCTCATaGTGCTCCTGGTTGAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: GAKYFLLRSHEVKDILFTTLGTS*CSWLNQ Trigger: CTGATTCAACCAGGAGCAGCATGAGGTCCCCAGGGT...TGTGAACAGAATGTCCTTCACCTCATGGGACCTTAAGAGGAAATACTTTGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| 3UTR CCA 72 bp | CAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTaGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QHKMAVESLMRA*GWGRRVGKKGQ Trigger: CTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTTGGGGGCGCAGAGTGGGTAAGAGCATGGGTGCAGAGTaGCTCCAGGGTTTGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: MAVESLMRAWGWGRRVGKSMGAE*LQGLAS Trigger: TGATGCCAAACCCTGGAGCAACTCTGCACCCATGCT...CTTACCCACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR GCA 72 bp | AGGACATTCTGTTCACACCCGACCCTGGGGACCTCATaGTGCTCCTGGTTGAATCAGGACACGGCCCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: RTFCSHPTLGTS*CSWLNQDTALT Trigger: AGTCAGGGCCGTGTCCTGATTCAACCAGGAGCAGCATGAGGTCCCCAGGGTCGGGTGTGAACAGAATGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| 3UTR CCA 72 bp | GAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTaGCATCACTGTGCAGAAGGTGACAAGGCCTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: EGPAWVQSCSRV*HHCAEGDKAWC Trigger: ACACCAGGCCTTGTCACCTTCTGCACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR CCA 72 bp | TGTTCACACCCGACCCTGGGGACCTCATGCTGCTCCTaGTTGAATCAGGACACGGCCCTGACTCTCCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CSHPTLGTSCCS*LNQDTALTLLS Trigger: AGAAAGGAGAGTCAGGGCCGTGTCCTGATTCAACCAGGAGCAGCATGAGGTCCCCAGGGTCGGGTGTGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTTGGAGCATGGGTGCAGAGTaGCTCCAGGGTTTGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: QNSQHKMAVESLMRAWGWSMGAE*LQGLAS Trigger: TGATGCCAAACCCTGGAGCAACTCTGCACCCATGCT...CCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR TCA 72 bp | GAGTTGCTCCAGGGTTTGGCATCACTGTGCAGAAGGTaGCAAGGCCTGGTGTACATCTATCTTCATGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ELLQGLASLCRR*QGLVYIYLHGR Trigger: CCTGCCATGAAGATAGATGTACACCAGGCCTTGTCACCTTCTGCACAGTGATGCCAAACCCTGGAGCAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188561.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTACTCCAGAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGAGCATGGGTGCAGAGTaGCTCCAGGGTTTGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: FTPEQPAQNGSREPDEGLSMGAE*LQGLAS Trigger: TGATGCCAAACCCTGGAGCAACTCTGCACCCATGCT...CAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTCTGGAGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCATGGTTGGGCTTAAAGGAGCCTTTACTCCAGAACAGCCAGCACAAAATGAGCATGGGTGCAGAGTaGCTCCAGGGTTTGGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GSWLGLKEPLLQNSQHKMSMGAE*LQGLAS Trigger: TGATGCCAAACCCTGGAGCAACTCTGCACCCATGCT...CATTTTGTGCTGGCTGTTCTGGAGTAAAGGCTCCTTTAAGCCCAACCATGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR TCA 72 bp | TGCTGCCCTCTGGGAGTCTTAAGGAGTTTGGAGATGTaGGCTATCCTTTTCTCTCTTCCCCTATTTCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: CCPLGVLRSLEM*AILFSLPLFQA Trigger: GGCCTGAAATAGGGGAAGAGAGAAAAGGATAGCTCACATCTCCAAACTCCTTAAGACTCCCAGAGGGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000185986.7 ENSMUST00000190268.2 |
||
| 3UTR TCA 72 bp | CCGTTTAGGAGCAAAGTATTTCCTCTTAAGGTCCCATaGGGTGAAGGACATTCTGTTCACACCCGACCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PFRSKVFPLKVP*GEGHSVHTRPW Trigger: CCAGGGTCGGGTGTGAACAGAATGTCCTTCACCTCATGGGACCTTAAGAGGAAATACTTTGCTCCTAAACGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| 3UTR GCA 72 bp | CAGGGCCTTATAGGGAAACAGAGGATCAATTGGTTTTaGGTGGCTTCTGGGTCATGGTTGGGCTTAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGLIGKQRINWF*VASGSWLGLKE Trigger: CTCCTTTAAGCCCAACCATGACCCAGAAGCCACGCAAAACCAATTGATCCTCTGTTTCCCTATAAGGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR CCA 72 bp | CAGAGGATCAATTGGTTTTGCGTGGCTTCTGGGTCATaGTTGGGCTTAAAGGAGCCTTTACTCCAGAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: QRINWFCVASGS*LGLKEPLLQNS Trigger: GCTGTTCTGGAGTAAAGGCTCCTTTAAGCCCAACCATGACCCAGAAGCCACGCAAAACCAATTGATCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | GTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGTCGGTGTGGACCGGTaGGCTGGGCCACTCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGGAEWVRRASMGAELLQVGVDR*AGPLWP Trigger: GGGCCAGAGTGGCCCAGCCCACCGGTCCACACCGAC...CTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | CTAAGAGGAGGCTCAAGGGAGCTGAATCCGCTGCAGGGGCCTCCTGAGCTGGGCTGGGCTGGGCCACTCTaGCCCTGGGTTCAGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LRGGSRELNPLQGPPELGWAGPL*PWVQGI Trigger: GATGCCCTGAACCCAGGGCCAGAGTGGCCCAGCCCA...GCCCAGCTCAGGAGGCCCCTGCAGCGGATTCAGCTCCCTTGAGCCTCCTCTTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGGAGGCTGGCCAGAGTaGCATGGGACCCAAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AWGWGRRVGKKGQHGCRVGGWPE*HGTQGS Trigger: ACTCCCTTGGGTCCCATGTCACTCTGGCCAGCCTCC...AACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCAAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR GCA 90 bp | ATGAGGGCTTGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCGTCCAAGGGAAGGGCTaGAAGATGGTCACCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MRAWGWGRRVGKKGQHGCVQGKG*KMVTQG Trigger: GCCCTGGGTGACCATCTTGCAGCCCTTCCCTTGGAC...GCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCAAGCCCTCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106816.8 ENSMUST00000188561.7 |
||
| CDS-3UTR CCA 90 bp | GAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCAGTCGGTGTGGACCGGTaGGCTGGGCCACTCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EWVRRASMGAELLQGLASVGVDR*AGPLWP Trigger: GGGCCAGAGTGGCCCAGCCCACCGGTCCACACCGAC...TGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | GTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGTCACCTCCTCTTGCCTaGAGGCAGGGGGCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGGAEWVRRASMGAELLQSPPLA*RQGAGA Trigger: AGCACCAGCCCCCTGCCTCCAGGCAAGAGGAGGTGA...CTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | TGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTTCACCTCCTCTTGCCTaGAGGCAGGGGGCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGWGRRVGKKGQHGCRVASPPLA*RQGAGA Trigger: AGCACCAGCCCCCTGCCTCCAGGCAAGAGGAGGTGA...AGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTTCACCTCCTCTTGCCTaGAGGCAGGGGGCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWGWGRRVGKKGQHGCRVSPPLA*RQGAGA Trigger: AGCACCAGCCCCCTGCCTCCAGGCAAGAGGAGGTGA...AACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCAAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTTGGGGGCGCAGAGTGGGTAAGGGAGGCTGGCCAGAGTaGCATGGGACCCAAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MAVESLMRAWGWGRRVGKGGWPE*HGTQGS Trigger: ACTCCCTTGGGTCCCATGTCACTCTGGCCAGCCTCC...CTTACCCACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | CTCCAGAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTGTCGGTGTGGACCGGTaGGCTGGGCCACTCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQNSQHKMAVESLMRAWGVGVDR*AGPLWP Trigger: GGGCCAGAGTGGCCCAGCCCACCGGTCCACACCGAC...ACCCCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | GGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCTGGCCAGAGTGACATaGGACCCAAGGGAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GVGGAEWVRRASMGAELLLARVT*DPRESL Trigger: CAGTGACTCCCTTGGGTCCCATGTCACTCTGGCCAG...GAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCGGCACATCTCTCCGGTaGGCTGGGCCACTCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGKKGQHGCRVAPGFGIGTSLR*AGPLWP Trigger: GGGCCAGAGTGGCCCAGCCCACCGGAGAGATGTGCC...GATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188561.7 |
||
| CDS-3UTR GCA 90 bp | CTAAGAGGAGGCTCAAGGGAGCTGAATCCGCTGCAGGGGCCTCCTGAGCTGGGCAAGGGCCAGCATGGGTaGAGAGTTGCTCCAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRGGSRELNPLQGPPELGKGQHG*RVAPGF Trigger: AAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTT...GCCCAGCTCAGGAGGCCCCTGCAGCGGATTCAGCTCCCTTGAGCCTCCTCTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGGGCTGGGCCACTCTaGCCCTGGGTTCAGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: WVRRASMGAELLQGLASLWAGPL*PWVQGI Trigger: GATGCCCTGAACCCAGGGCCAGAGTGGCCCAGCCCA...CAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | AAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGCAGTGGGCTGGGCCACTCTaGCCCTGGGTTCAGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KKGQHGCRVAPGFGITVQWAGPL*PWVQGI Trigger: GATGCCCTGAACCCAGGGCCAGAGTGGCCCAGCCCA...CTGCACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | GAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTTGGGGTGGGCTGGGCCACTCTaGCCCTGGGTTCAGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: EQPAQNGSREPDEGLGLGWAGPL*PWVQGI Trigger: GATGCCCTGAACCCAGGGCCAGAGTGGCCCAGCCCA...CCCCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| 3UTR CAA 72 bp | TCACACCCGACCCTGGGGACCTCATGCTGCTCCTGGTaGAATCAGGACACGGCCCTGACTCTCCTTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SHPTLGTSCCSW*NQDTALTLLSA Trigger: GGCAGAAAGGAGAGTCAGGGCCGTGTCCTGATTCAACCAGGAGCAGCATGAGGTCCCCAGGGTCGGGTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGGGAGGCTGGCCAGAGTaGCATGGGACCCAAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WVRRASMGAELLQGLASLGGWPE*HGTQGS Trigger: ACTCCCTTGGGTCCCATGTCACTCTGGCCAGCCTCC...CAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTTGGCCCAGTAGCAGCTaGTGCATCTGTGCGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AWGWGRRVGKKGQHGCRVWPSSS*CICAFC Trigger: ACAGAACGCACAGATGCACCAGCTGCTACTGGGCCA...AACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGGCCTAGGGGTGAAGACACACAGCCTTCATCATCCCAGAGAGAGGGGCTGGGCTGGGCCACTCTaGCCCTGGGTTCAGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ISGLGVKTHSLHHPRERGWAGPL*PWVQGI Trigger: GATGCCCTGAACCCAGGGCCAGAGTGGCCCAGCCCA...GCCCCTCTCTCTGGGATGATGAAGGCTGTGTGTCTTCACCCCTAGGCCTGAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000185986.7 ENSMUST00000190268.2 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTTGGGGGCGCAGAGTGGGTAAGCTGGCCAGAGTGACATaGGACCCAAGGGAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: MAVESLMRAWGWGRRVGKLARVT*DPRESL Trigger: CAGTGACTCCCTTGGGTCCCATGTCACTCTGGCCAG...CTTACCCACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | TGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCTGAGGCTGAGAAGATaGGACTGTCCAAGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WGWGRRVGKKGQHGCRVALRLRR*DCPREG Trigger: CCCTTCCCTTGGACAGTCCCATCTTCTCAGCCTCAG...AGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCCTCTCCATCCATGCTGCCCTCTGGGAGTCTTAAGGAGTTTGGAGATGAGCCTGATGAGGGCTTaGGGTTGGGGGCGCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WAPLHPCCPLGVLRSLEMSLMRA*GWGRRV Trigger: CACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCT...CATCTCCAAACTCCTTAAGACTCCCAGAGGGCAGCATGGATGGAGAGGGGCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR TCA 90 bp | CAGAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTTGGGGAGGCTGGCCAGAGTaGCATGGGACCCAAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNSQHKMAVESLMRAWGWGGWPE*HGTQGS Trigger: ACTCCCTTGGGTCCCATGTCACTCTGGCCAGCCTCC...CCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTTGGGGGCGCAGAGTGGGTAAGTGGCCCAGTAGCAGCTaGTGCATCTGTGCGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MAVESLMRAWGWGRRVGKWPSSS*CICAFC Trigger: ACAGAACGCACAGATGCACCAGCTGCTACTGGGCCA...CTTACCCACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGCAGCCAGCAGGTCTTCCTTaGCCCGGTTATGCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKGQHGCRVAPGFGITVQPAGLP*PGYAEA Trigger: AGCCTCAGCATAACCGGGTCAAGGAAGACCTGCTGG...CTGCACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 |
||
| CDS-3UTR GCA 90 bp | TGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTAAAGGCTCTTGCTCCTaGATCTCCATCTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WGWGRRVGKKGQHGCRVAKGSCS*ISISSS Trigger: GGAGGAAGAGATGGAGATGCAGGAGCAAGAGCCTTT...AGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR GCA 90 bp | ACTCCAGAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGGTCCAAGGGAAGGGCTaGAAGATGGTCACCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TPEQPAQNGSREPDEGLGVQGKG*KMVTQG Trigger: GCCCTGGGTGACCATCTTGCAGCCCTTCCCTTGGAC...CCCCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTCTGGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106816.8 ENSMUST00000188561.7 |
||
| CDS-3UTR CCA 90 bp | CTGAGCTGGGCCCCTCTCCATCCATGCTGCCCTCTGGGAGTCTTAAGGAGTTTGTGGCCCAGTAGCAGCTaGTGCATCTGTGCGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSWAPLHPCCPLGVLRSLWPSSS*CICAFC Trigger: ACAGAACGCACAGATGCACCAGCTGCTACTGGGCCA...CAAACTCCTTAAGACTCCCAGAGGGCAGCATGGATGGAGAGGGGCCCAGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185986.7 ENSMUST00000190268.2 |
||
| CDS-3UTR CCA 90 bp | TTACTCCAGAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGGTGGGCTGGGCCACTCTaGCCCTGGGTTCAGGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLQNSQHKMAVESLMRAWWAGPL*PWVQGI Trigger: GATGCCCTGAACCCAGGGCCAGAGTGGCCCAGCCCA...CCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTCTGGAGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | TCCATGCTGCCCTCTGGGAGTCTTAAGGAGTTTGGAGATGTGAGCTATCCTTTTGTCGGTGTGGACCGGTaGGCTGGGCCACTCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SMLPSGSLKEFGDVSYPFVGVDR*AGPLWP Trigger: GGGCCAGAGTGGCCCAGCCCACCGGTCCACACCGAC...AAAAGGATAGCTCACATCTCCAAACTCCTTAAGACTCCCAGAGGGCAGCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185986.7 ENSMUST00000190268.2 |
||
| CDS-3UTR CCA 90 bp | GGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGCTGGCCAGAGTGACATaGGACCCAAGGGAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GKKGQHGCRVAPGFGITVLARVT*DPRESL Trigger: CAGTGACTCCCTTGGGTCCCATGTCACTCTGGCCAG...CACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | AGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGCAGACTGGCCAGAGTGACATaGGACCCAAGGGAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RRASMGAELLQGLASLCRLARVT*DPRESL Trigger: CAGTGACTCCCTTGGGTCCCATGTCACTCTGGCCAG...TCTGCACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR TCA 90 bp | ACTCCAGAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGCCAGCAGGTCTTCCTTaGCCCGGTTATGCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPEQPAQNGSREPDEGLGPAGLP*PGYAEA Trigger: AGCCTCAGCATAACCGGGTCAAGGAAGACCTGCTGG...CCCCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTCTGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 |
||
| CDS-3UTR GCA 90 bp | AATCAGGACACGGCCCTGACTCTCCTTTCTGCCAACACTAAGAGGAGGCTCAAGGTCCAAGGGAAGGGCTaGAAGATGGTCACCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NQDTALTLLSANTKRRLKVQGKG*KMVTQG Trigger: GCCCTGGGTGACCATCTTGCAGCCCTTCCCTTGGAC...CTTGAGCCTCCTCTTAGTGTTGGCAGAAAGGAGAGTCAGGGCCGTGTCCTGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCTGGCCCAGTAGCAGCTaGTGCATCTGTGCGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVGKKGQHGCRVAPGFGIWPSSS*CICAFC Trigger: ACAGAACGCACAGATGCACCAGCTGCTACTGGGCCA...GATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | GGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGCTGAGGCTGAGAAGATaGGACTGTCCAAGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKKGQHGCRVAPGFGITVLRLRR*DCPREG Trigger: CCCTTCCCTTGGACAGTCCCATCTTCTCAGCCTCAG...CACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 |
||
| CDS-3UTR CCA 90 bp | AGGCCTAGGGGTGAAGACACACAGCCTTCATCATCCCAGAGAGAGGGGCTGAGAGTGGCTTCTGGGTCATaGTTGGGCTTAAAGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPRGEDTQPSSSQREGLRVASGS*LGLKEP Trigger: AGGCTCCTTTAAGCCCAACCATGACCCAGAAGCCAC...TCTCAGCCCCTCTCTCTGGGATGATGAAGGCTGTGTGTCTTCACCCCTAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGCAAAGGCTCTTGCTCCTaGATCTCCATCTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRRASMGAELLQGLASLCKGSCS*ISISSS Trigger: GGAGGAAGAGATGGAGATGCAGGAGCAAGAGCCTTT...GCACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR GCA 90 bp | AGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGCAGAAAAGGCTCTTGCTCCTaGATCTCCATCTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRASMGAELLQGLASLCRKGSCS*ISISSS Trigger: GGAGGAAGAGATGGAGATGCAGGAGCAAGAGCCTTT...TCTGCACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCAAAGGCTCTTGCTCCTaGATCTCCATCTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGKKGQHGCRVAPGFGIKGSCS*ISISSS Trigger: GGAGGAAGAGATGGAGATGCAGGAGCAAGAGCCTTT...GATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CCA 90 bp | TTGAATCAGGACACGGCCCTGACTCTCCTTTCTGCCAACACTAAGAGGAGGCTCTGGCCCAGTAGCAGCTaGTGCATCTGTGCGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNQDTALTLLSANTKRRLWPSSS*CICAFC Trigger: ACAGAACGCACAGATGCACCAGCTGCTACTGGGCCA...GAGCCTCCTCTTAGTGTTGGCAGAAAGGAGAGTCAGGGCCGTGTCCTGATTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCATCCCCAGACATCTACCCACACCGTTTAGGAGCAAAGTATTTCCTCTTAGGAGGCTGGCCAGAGTaGCATGGGACCCAAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SASPDIYPHRLGAKYFLLGGWPE*HGTQGS Trigger: ACTCCCTTGGGTCCCATGTCACTCTGGCCAGCCTCC...TAAGAGGAAATACTTTGCTCCTAAACGGTGTGGGTAGATGTCTGGGGATGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR GCA 90 bp | AGCCTCTGCATCCCCAGACATCTACCCACACCGTTTAGGAGCAAAGTATTTCCTATAGTAGTCTCCTCTTaGCTGGAGGCAGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLCIPRHLPTPFRSKVFPIVVSS*LEAGGW Trigger: CCAGCCCCCTGCCTCCAGGCAAGAGGAGACTACTAT...AGGAAATACTTTGCTCCTAAACGGTGTGGGTAGATGTCTGGGGATGCAGAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCCTCTGCATCCCCAGACATCTACCCACACCGTTTAGGAGCAAAGTATTTCCTGAGGCTGAGAAGATaGGACTGTCCAAGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GASASPDIYPHRLGAKYFLRLRR*DCPREG Trigger: CCCTTCCCTTGGACAGTCCCATCTTCTCAGCCTCAG...GAAATACTTTGCTCCTAAACGGTGTGGGTAGATGTCTGGGGATGCAGAGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR TCA 90 bp | AAGTATTTCCTCTTAAGGTCCCATGAGGTGAAGGACATTCTGTTCACACCCGACCCAGCAGGTCTTCCTTaGCCCGGTTATGCTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KYFLLRSHEVKDILFTPDPAGLP*PGYAEA Trigger: AGCCTCAGCATAACCGGGTCAAGGAAGACCTGCTGG...GTCGGGTGTGAACAGAATGTCCTTCACCTCATGGGACCTTAAGAGGAAATACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR GCA 90 bp | CCATCCATGCTGCCCTCTGGGAGTCTTAAGGAGTTTGGAGATGTGAGCTATCCTAAAGGCTCTTGCTCCTaGATCTCCATCTCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSMLPSGSLKEFGDVSYPKGSCS*ISISSS Trigger: GGAGGAAGAGATGGAGATGCAGGAGCAAGAGCCTTT...AGGATAGCTCACATCTCCAAACTCCTTAAGACTCCCAGAGGGCAGCATGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000185986.7 ENSMUST00000190268.2 |
||
| CDS-3UTR GCA 90 bp | AATCAGGACACGGCCCTGACTCTCCTTTCTGCCAACACTAAGAGGAGGCTCAAGAGGATCAATTGGTTTTaGGTGGCTTCTGGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NQDTALTLLSANTKRRLKRINWF*VASGSW Trigger: CCATGACCCAGAAGCCACGCAAAACCAATTGATCCT...CTTGAGCCTCCTCTTAGTGTTGGCAGAAAGGAGAGTCAGGGCCGTGTCCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCATCCCCAGACATCTACCCACACCGTTTAGGAGCAAAGTATTTCCTCTTACTGGCCAGAGTGACATaGGACCCAAGGGAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SASPDIYPHRLGAKYFLLLARVT*DPRESL Trigger: CAGTGACTCCCTTGGGTCCCATGTCACTCTGGCCAG...TAAGAGGAAATACTTTGCTCCTAAACGGTGTGGGTAGATGTCTGGGGATGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTCATGGTTGGGCTTAAAGGAGCCTTTACTCCAGAACAGCCAGCACAAAATCTGAGGCTGAGAAGATaGGACTGTCCAAGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WVMVGLKGAFTPEQPAQNLRLRR*DCPREG Trigger: CCCTTCCCTTGGACAGTCCCATCTTCTCAGCCTCAG...ATTTTGTGCTGGCTGTTCTGGAGTAAAGGCTCCTTTAAGCCCAACCATGACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185986.7 ENSMUST00000188561.7 |
||
| 3UTR CAA 72 bp | CTGGTATCAGGGCCTTATAGGGAAACAGAGGATCAATaGGTTTTGCGTGGCTTCTGGGTCATGGTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVSGPYRETEDQ*VLRGFWVMVGL Trigger: AAGCCCAACCATGACCCAGAAGCCACGCAAAACCAATTGATCCTCTGTTTCCCTATAAGGCCCTGATACCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| 3UTR CAA 72 bp | TCAGGGCCTTATAGGGAAACAGAGGATCAATTGGTTTaGCGTGGCTTCTGGGTCATGGTTGGGCTTAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGPYRETEDQLV*RGFWVMVGLKG Trigger: TCCTTTAAGCCCAACCATGACCCAGAAGCCACGCAAAACCAATTGATCCTCTGTTTCCCTATAAGGCCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000185986.7 ENSMUST00000188561.7 ENSMUST00000190795.7 |
||
| CDS-3UTR TCA 90 bp | GGAGCAAAGTATTTCCTCTTAAGGTCCCATGAGGTGAAGGACATTCTGTTCACATCACTGTGCAGAAGGTaGCAAGGCCTGGTGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: GAKYFLLRSHEVKDILFTSLCRR*QGLVYI Trigger: GATGTACACCAGGCCTTGTCACCTTCTGCACAGTGA...TGTGAACAGAATGTCCTTCACCTCATGGGACCTTAAGAGGAAATACTTTGCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGGGCTTGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCATCTCTCACCTCCTCTaGCCTGGAGGCAGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MRAWGWGRRVGKKGQHGCISHLL*PGGRGL Trigger: CAGCCCCCTGCCTCCAGGCAAGAGGAGGTGAGAGAT...GCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCAAGCCCTCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CAA 90 bp | GGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCATCTCTCACCTCCTCTaGCCTGGAGGCAGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVGGAEWVRRASMGAELLISHLL*PGGRGL Trigger: CAGCCCCCTGCCTCCAGGCAAGAGGAGGTGAGAGAT...GAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CAA 90 bp | GGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCGGGCTGTGCTCTGTGTaGGGACACCACTCCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVGGAEWVRRASMGAELLGLCSV*GHHSSS Trigger: GGAACTGGAGTGGTGTCCCAACACAGAGCACAGCCC...GAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 |
||
| CDS-3UTR CAA 90 bp | AAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGCAGAAGATCTCTCACCTCCTCTaGCCTGGAGGCAGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGQHGCRVAPGFGITVQKISHLL*PGGRGL Trigger: CAGCCCCCTGCCTCCAGGCAAGAGGAGGTGAGAGAT...CTTCTGCACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CAA 90 bp | GAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTTGGGGATCTCTCACCTCCTCTaGCCTGGAGGCAGGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EQPAQNGSREPDEGLGLGISHLL*PGGRGL Trigger: CAGCCCCCTGCCTCCAGGCAAGAGGAGGTGAGAGAT...CCCCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CAA 90 bp | ATGAGGGCTTGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCGTAAACCAAAGGCTCTaGCTCCTGCATCTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: MRAWGWGRRVGKKGQHGCVNQRL*LLHLHL Trigger: GAGATGGAGATGCAGGAGCAAGAGCCTTTGGTTTAC...GCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCAAGCCCTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CAA 90 bp | GAACAGCCAGCACAAAATGGCAGTAGAGAGCCTGATGAGGGCTTGGGGTTGGGGGGGCTGTGCTCTGTGTaGGGACACCACTCCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EQPAQNGSREPDEGLGLGGLCSV*GHHSSS Trigger: GGAACTGGAGTGGTGTCCCAACACAGAGCACAGCCC...CCCCAACCCCAAGCCCTCATCAGGCTCTCTACTGCCATTTTGTGCTGGCTGTTC 59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGGTTTGGCATCACTGTGCAGAGGGCTGTGCTCTGTGTaGGGACACCACTCCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRASMGAELLQGLASLCRGLCSV*GHHSSS Trigger: GGAACTGGAGTGGTGTCCCAACACAGAGCACAGCCC...TCTGCACAGTGATGCCAAACCCTGGAGCAACTCTGCACCCATGCTGGCCCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000188561.7 |
||
| CDS CCA 90 bp | CTCCAGCAGGTCTTCCTTGACCCGGTTATGCTGAGGCTGAGAAGATaGGACTGTCCAAGGGAAGGGCATAGGGGCTGTGCTCTGTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQQVFLDPVMLRLRR*DCPREGHRGCALCW Trigger: CCAACACAGAGCACAGCCCCTATGCCCTTCCCTTGGACAGTCCCATCTTCTCAGCCTCAGCATAACCGGGTCAAGGAAGACCTGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185986.7 |
||
| CDS-3UTR CAA 90 bp | TGGGGTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTGTAAACCAAAGGCTCTaGCTCCTGCATCTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: WGWGRRVGKKGQHGCRVAVNQRL*LLHLHL Trigger: GAGATGGAGATGCAGGAGCAAGAGCCTTTGGTTTAC...AGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAACCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CAA 90 bp | GTTGGGGGCGCAGAGTGGGTAAGAAGGGCCAGCATGGGTGCAGAGTTGCTCCAGGTAAACCAAAGGCTCTaGCTCCTGCATCTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: VGGAEWVRRASMGAELLQVNQRL*LLHLHL Trigger: GAGATGGAGATGCAGGAGCAAGAGCCTTTGGTTTAC...CTGGAGCAACTCTGCACCCATGCTGGCCCTTCTTACCCACTCTGCGCCCCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190795.7 |
||
| CDS-3UTR CAA 90 bp | TCCCATGAGGTGAAGGACATTCTGTTCACACCCGACCCTGGGGACCTCATGCTGAGCATGGGTGCAGAGTaGCTCCAGGGTTTGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SHEVKDILFTPDPGDLMLSMGAE*LQGLAS Trigger: TGATGCCAAACCCTGGAGCAACTCTGCACCCATGCT...CAGCATGAGGTCCCCAGGGTCGGGTGTGAACAGAATGTCCTTCACCTCATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGCTGGGCCCCTCTCCATCCATGCTGCCCTCTGGGAGTCTTAAGGAGTTTGGTAAACCAAAGGCTCTaGCTCCTGCATCTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSWAPLHPCCPLGVLRSLVNQRL*LLHLHL Trigger: GAGATGGAGATGCAGGAGCAAGAGCCTTTGGTTTAC...CAAACTCCTTAAGACTCCCAGAGGGCAGCATGGATGGAGAGGGGCCCAGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185986.7 ENSMUST00000190268.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGGCCTAGGGGTGAAGACACACAGCCTTCATCATCCCAGAGAGAGGGGCTGGTAAACCAAAGGCTCTaGCTCCTGCATCTCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: FRPRGEDTQPSSSQREGLVNQRL*LLHLHL Trigger: GAGATGGAGATGCAGGAGCAAGAGCCTTTGGTTTAC...CAGCCCCTCTCTCTGGGATGATGAAGGCTGTGTGTCTTCACCCCTAGGCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000185986.7 ENSMUST00000190268.2 ENSMUST00000190795.7 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGGCCCCTCTCCATCCATGCTGCCCTCTGGGAGTCTTAAGGAGTTTGGAGAAACAGAGGATCAATaGGTTTTGCGTGGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELGPSPSMLPSGSLKEFGETEDQ*VLRGFW Trigger: CCAGAAGCCACGCAAAACCAATTGATCCTCTGTTTC...TCCAAACTCCTTAAGACTCCCAGAGGGCAGCATGGATGGAGAGGGGCCCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGCTGCCCTCTGGGAGTCTTAAGGAGTTTGGAGATGTGAGCTATCCTTTTGGGCTGTGCTCTGTGTaGGGACACCACTCCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMLPSGSLKEFGDVSYPFGLCSV*GHHSSS Trigger: GGAACTGGAGTGGTGTCCCAACACAGAGCACAGCCC...AAAAGGATAGCTCACATCTCCAAACTCCTTAAGACTCCCAGAGGGCAGCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000185986.7 ENSMUST00000190268.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAAGTATTTCCTCTTAAGGTCCCATGAGGTGAAGGACATTCTGTTCACAGAGCCTGATGAGGGCTaGGGGTTGGGGGCGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GAKYFLLRSHEVKDILFTEPDEG*GLGAQS Trigger: ACTCTGCGCCCCCAACCCCAAGCCCTCATCAGGCTC...TGTGAACAGAATGTCCTTCACCTCATGGGACCTTAAGAGGAAATACTTTGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS CCA 90 bp | ATCACTGTGCAGAAGGTGACAAGGCCTGGTGTACATCTATCTTCATaGCAGGCTCTCCGCATCATAGTAGTCTCCTCTTGCCTGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ITVQKVTRPGVHLSS*QALRIIVVSSCLEA Trigger: TGCCTCCAGGCAAGAGGAGACTACTATGATGCGGAGAGCCTGCCATGAAGATAGATGTACACCAGGCCTTGTCACCTTCTGCACAGTGAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS CCA 90 bp | AGTTGCTCCAGGGTTTGGCATCACTGTGCAGAAGGTGACAAGGCCTaGTGTACATCTATCTTCATGGCAGGCTCTCCGCATCATAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SCSRVWHHCAEGDKA*CTSIFMAGSPHHSS Trigger: ACTACTATGATGCGGAGAGCCTGCCATGAAGATAGATGTACACCAGGCCTTGTCACCTTCTGCACAGTGATGCCAAACCCTGGAGCAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS CCA 72 bp | GGTGGGGGCACATCTCTCCGGTGGGCTGGGCCACTCTaGCCCTGGGTTCAGGGCATCTGCCACCAGTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GGGTSLRWAGPL*PWVQGICHQLA Trigger: GGCCAACTGGTGGCAGATGCCCTGAACCCAGGGCCAGAGTGGCCCAGCCCACCGGAGAGATGTGCCCCCACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188561.7 |
||
| CDS CCA 72 bp | GTGACTGTCGGTGTGGACCGGTGGGCTGGGCCACTCTaGCCCTGGGTTCAGGGCATCTGCCACCAGTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VTVGVDRWAGPL*PWVQGICHQLA Trigger: GGCCAACTGGTGGCAGATGCCCTGAACCCAGGGCCAGAGTGGCCCAGCCCACCGGTCCACACCGACAGTCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000009354.10 ENSMUST00000106816.8 ENSMUST00000185986.7 ENSMUST00000190268.2 ENSMUST00000190795.7 |
||
| CDS CCA 72 bp | GATGGTCACCCAGGGCATAGGGGCTGTGCTCTGTGTTaGGACACCACTCCAGTTCCCACTCCCGAGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: DGHPGHRGCALC*DTTPVPTPEGG Trigger: GCCTCCCTCGGGAGTGGGAACTGGAGTGGTGTCCCAACACAGAGCACAGCCCCTATGCCCTGGGTGACCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106816.8 ENSMUST00000188561.7 ENSMUST00000190268.2 |
||
| CDS CCA 72 bp | TGTCCAAGGGAAGGGCATAGGGGCTGTGCTCTGTGTTaGGACACCACTCCAGTTCCCACTCCCGAGGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CPREGHRGCALC*DTTPVPTPEGG Trigger: GCCTCCCTCGGGAGTGGGAACTGGAGTGGTGTCCCAACACAGAGCACAGCCCCTATGCCCTTCCCTTGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185986.7 |
||
| CDS CCA 72 bp | GTCTTCCTTGACCCGGTTATGCTGAGGCTGAGAAGATaGGACTGTCCAAGGGAAGGGCTGCAAGATGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: VFLDPVMLRLRR*DCPREGLQDGH Trigger: GTGACCATCTTGCAGCCCTTCCCTTGGACAGTCCCATCTTCTCAGCCTCAGCATAACCGGGTCAAGGAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106816.8 ENSMUST00000188561.7 ENSMUST00000190268.2 |
||
| CDS CCA 72 bp | AGGGTTTGGCATCACTGTGCAGAAGGTGACAAGGCCTaGTGTACATCTATCTTCATGGCAGGCTCTCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RVWHHCAEGDKA*CTSIFMAGSPH Trigger: ATGCGGAGAGCCTGCCATGAAGATAGATGTACACCAGGCCTTGTCACCTTCTGCACAGTGATGCCAAACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||
| CDS CCA 72 bp | CAGAAGGTGACAAGGCCTGGTGTACATCTATCTTCATaGCAGGCTCTCCGCATCATAGTAGTCTCCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QKVTRPGVHLSS*QALRIIVVSSC Trigger: GCAAGAGGAGACTACTATGATGCGGAGAGCCTGCCATGAAGATAGATGTACACCAGGCCTTGTCACCTTCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190268.2 |
||