Pregenerated sensors for PRR23A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090470Ensembl transcript IDs: ENSMUST00000167951.3
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACCCAAGCCTGGCAGAGTGGCGCAAGACTTCGATCCCAGCACTTaGGAGGCAGAGGCAGGTAGATCTCTGCGAGTTCAAGACCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: KPKPGRVAQDFDPST*EAEAGRSLRVQDQP Trigger: AGGCTGGTCTTGAACTCGCAGAGATCTACCTGCCTCTGCCTCCCAAGTGCTGGGATCGAAGTCTTGCGCCACTCTGCCAGGCTTGGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| 3UTR TCA 90 bp | ATGCATATCCCAGCGCATGCTGAAAACAGCCGGCAAACTTCACCATaGATCACACTTACAATGAAGGAACTGAAATGGGAGACTATTCCA | + |
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Preference number: 1 (lower is better) Translates to: MHIPAHAENSRQTSP*ITLTMKELKWETIP Trigger: TGGAATAGTCTCCCATTTCAGTTCCTTCATTGTAAGTGTGATTCATGGTGAAGTTTGCCGGCTGTTTTCAGCATGCGCTGGGATATGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCGAGTTCAAGACCAGCCTCTATTACATAGTTCTAAGAAAGCCACAGATTTCTATCCCAGCGCATGCTaGAAACAGCCGGCAAACTTC | + |
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Preference number: 2 (lower is better) Translates to: LRVQDQPLLHSSKKATDFYPSAC*KQPANF Trigger: GAAGTTTGCCGGCTGTTTTCAGCATGCGCTGGGATA...GAAATCTGTGGCTTTCTTAGAACTATGTAATAGAGGCTGGTCTTGAACTCGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCGAGTTCAAGACCAGCCTCTATTACATAGTTCTAAGAAAGCCACAGATTTCTTAATTCTAACATCATaGGGCCTAAGTGCCTTGCAA | + |
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Preference number: 2 (lower is better) Translates to: LRVQDQPLLHSSKKATDFLILTS*GLSALQ Trigger: TTGCAAGGCACTTAGGCCCCATGATGTTAGAATTAA...GAAATCTGTGGCTTTCTTAGAACTATGTAATAGAGGCTGGTCTTGAACTCGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAACTTCACCATGAATCACACTTACAATGAAGGAACTGAAATGGGAGACTATAGAAGAAACAGGTGTTaGGGATTTTACCACTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: ANFTMNHTYNEGTEMGDYRRNRC*GFYHLN Trigger: ATTCAAGTGGTAAAATCCCCAACACCTGTTTCTTCT...ATAGTCTCCCATTTCAGTTCCTTCATTGTAAGTGTGATTCATGGTGAAGTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| 3UTR CCA 72 bp | CCTGGCAGAGTGGCGCAAGACTTCGATCCCAGCACTTaGGAGGCAGAGGCAGGTAGATCTCTGCGAGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: PGRVAQDFDPST*EAEAGRSLRVQ Trigger: TTGAACTCGCAGAGATCTACCTGCCTCTGCCTCCCAAGTGCTGGGATCGAAGTCTTGCGCCACTCTGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| 3UTR CCA 72 bp | GAATGTACTATAAAAAGAAACCCAAGCCTGGCAGAGTaGCGCAAGACTTCGATCCCAGCACTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ECTIKRNPSLAE*RKTSIPALGRQ Trigger: CTGCCTCCCAAGTGCTGGGATCGAAGTCTTGCGCCACTCTGCCAGGCTTGGGTTTCTTTTTATAGTACATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| 3UTR CCA 72 bp | GTCCTTTGGGTCAGCAAGGCTTTAATTCTAACATCATaGGGCCTAAGTGCCTTGCAACTAGGGGTAGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: VLWVSKALILTS*GLSALQLGVEK Trigger: CTTCTCTACCCCTAGTTGCAAGGCACTTAGGCCCCATGATGTTAGAATTAAAGCCTTGCTGACCCAAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| 3UTR TCA 72 bp | CCAGCGCATGCTGAAAACAGCCGGCAAACTTCACCATaGATCACACTTACAATGAAGGAACTGAAATGGGAG | + |
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Preference number: 3 (lower is better) Translates to: PAHAENSRQTSP*ITLTMKELKWE Trigger: CTCCCATTTCAGTTCCTTCATTGTAAGTGTGATTCATGGTGAAGTTTGCCGGCTGTTTTCAGCATGCGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR GCA 90 bp | GGCAGAGTGGCGCAAGACTTCGATCCCAGCACTTGGGAGGCAGAGGCAGGTAGACCGTCCAGGGGCAACTaGAGGGCAGAGCCGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GRVAQDFDPSTWEAEAGRPSRGN*RAEPAA Trigger: GGCCGCCGGCTCTGCCCTGCAGTTGCCCCTGGACGG...TCTACCTGCCTCTGCCTCCCAAGTGCTGGGATCGAAGTCTTGCGCCACTCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR GCA 90 bp | GGCAGAGTGGCGCAAGACTTCGATCCCAGCACTTGGGAGGCAGAGGCAGGTAGAGTCGCTTCCGGGCCCTaGGAGGAGCCCGGGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: GRVAQDFDPSTWEAEAGRVASGP*EEPGES Trigger: GCTCTCCCCGGGCTCCTCGCAGGGCCCGGAAGCGAC...TCTACCTGCCTCTGCCTCCCAAGTGCTGGGATCGAAGTCTTGCGCCACTCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR GCA 90 bp | GGCAGAGTGGCGCAAGACTTCGATCCCAGCACTTGGGAGGCAGAGGCAGGTAGAGGAGGGCTAGCCCAGTaGTCCAGAAATTCCAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GRVAQDFDPSTWEAEAGRGGLAQ*SRNSKS Trigger: AGACTTGGAATTTCTGGAGCACTGGGCTAGCCCTCC...TCTACCTGCCTCTGCCTCCCAAGTGCTGGGATCGAAGTCTTGCGCCACTCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR TCA 90 bp | CTGCGAGTTCAAGACCAGCCTCTATTACATAGTTCTAAGAAAGCCACAGATTTCTGCTGGTGTCTGCGGTaGCCAGCAGGGCGCGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LRVQDQPLLHSSKKATDFCWCLR*PAGRGV Trigger: GACCCCGCGCCCTGCTGGTCACCGCAGACACCAGCA...GAAATCTGTGGCTTTCTTAGAACTATGTAATAGAGGCTGGTCTTGAACTCGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR TCA 90 bp | CTCTGCGAGTTCAAGACCAGCCTCTATTACATAGTTCTAAGAAAGCCACAGATTGCTTCCAACTCGGGCTaGGCCAGGGGCTCTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LCEFKTSLYYIVLRKPQIASNSG*ARGSGH Trigger: GTGCCCAGAGCCCCTGGCTCAGCCCGAGTTGGAAGC...AATCTGTGGCTTTCTTAGAACTATGTAATAGAGGCTGGTCTTGAACTCGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR GCA 90 bp | GGCAGAGTGGCGCAAGACTTCGATCCCAGCACTTGGGAGGCAGAGGCAGGTAGACAGAAATTCCAAGTCTaGATCCTCATCACAGACATC | + |
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Preference number: 4 (lower is better) Translates to: GRVAQDFDPSTWEAEAGRQKFQV*ILITDI Trigger: GATGTCTGTGATGAGGATGCAGACTTGGAATTTCTG...TCTACCTGCCTCTGCCTCCCAAGTGCTGGGATCGAAGTCTTGCGCCACTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR TCA 90 bp | CTCTGCGAGTTCAAGACCAGCCTCTATTACATAGTTCTAAGAAAGCCACAGATTCCTGGGACTTGGTCCTaGGACAAAGGACTGGGCACC | + |
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Preference number: 4 (lower is better) Translates to: LCEFKTSLYYIVLRKPQIPGTWS*DKGLGT Trigger: GGTGCCCAGTCCTTTGTCTCAGGACCAAGTCCCAGG...AATCTGTGGCTTTCTTAGAACTATGTAATAGAGGCTGGTCTTGAACTCGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR GCA 90 bp | CTCTGCGAGTTCAAGACCAGCCTCTATTACATAGTTCTAAGAAAGCCACAGATTGATGGAGGCAGAGGCTaGAGTGGTGAGCCAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LCEFKTSLYYIVLRKPQIDGGRG*SGEPGK Trigger: CTTCCCTGGCTCACCACTGCAGCCTCTGCCTCCATC...AATCTGTGGCTTTCTTAGAACTATGTAATAGAGGCTGGTCTTGAACTCGCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CCA 90 bp | ACTTACAATGAAGGAACTGAAATGGGAGACTATTCCAAGGAGCTTTGGAGATGGATTCCGGGAAGGAGATaGAGGCAGAGGCTGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TYNEGTEMGDYSKELWRWIPGRR*RQRLQW Trigger: CCACTGCAGCCTCTGCCTCCATCTCCTTCCCGGAAT...CCATCTCCAAAGCTCCTTGGAATAGTCTCCCATTTCAGTTCCTTCATTGTAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CCA 90 bp | ACTTACAATGAAGGAACTGAAATGGGAGACTATTCCAAGGAGCTTTGGAGATGGGGCGGAAGCTGCTCTTaGGGATTCCGGGAAGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: TYNEGTEMGDYSKELWRWGGSCS*GFREGD Trigger: ATCTCCTTCCCGGAATCCCCAAGAGCAGCTTCCGCC...CCATCTCCAAAGCTCCTTGGAATAGTCTCCCATTTCAGTTCCTTCATTGTAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CCA 90 bp | GCAAACTTCACCATGAATCACACTTACAATGAAGGAACTGAAATGGGAGACTATAAATGGGTGGAGTCTTaGAGCCCCTCGGGGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: ANFTMNHTYNEGTEMGDYKWVES*SPSGTR Trigger: CCTGGTCCCCGAGGGGCTCCAAGACTCCACCCATTT...ATAGTCTCCCATTTCAGTTCCTTCATTGTAAGTGTGATTCATGGTGAAGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CCA 90 bp | GCAAACTTCACCATGAATCACACTTACAATGAAGGAACTGAAATGGGAGACTATCCTGAGACAAAGGACTaGGCACCCCTGGGATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ANFTMNHTYNEGTEMGDYPETKD*APLGWR Trigger: CCTCCATCCCAGGGGTGCCCAGTCCTTTGTCTCAGG...ATAGTCTCCCATTTCAGTTCCTTCATTGTAAGTGTGATTCATGGTGAAGTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR GCA 90 bp | ACTTACAATGAAGGAACTGAAATGGGAGACTATTCCAAGGAGCTTTGGAGATGGAGGAGAATATTGCTCTaGTCCAGTGGAAGGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TYNEGTEMGDYSKELWRWRRILL*SSGRPW Trigger: CCAGGGCCTTCCACTGGAGCAGAGCAATATTCTCCT...CCATCTCCAAAGCTCCTTGGAATAGTCTCCCATTTCAGTTCCTTCATTGTAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CCA 90 bp | ACTTACAATGAAGGAACTGAAATGGGAGACTATTCCAAGGAGCTTTGGAGATGGAGGAAAAGTTCCCATTaGCCTGATCATCTGGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TYNEGTEMGDYSKELWRWRKSSH*PDHLEG Trigger: GCCCTCCAGATGATCAGGCCAATGGGAACTTTTCCT...CCATCTCCAAAGCTCCTTGGAATAGTCTCCCATTTCAGTTCCTTCATTGTAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CCA 90 bp | GCAAACTTCACCATGAATCACACTTACAATGAAGGAACTGAAATGGGAGACTATTCCAGTGGAAGGCCCTaGGACTTGGTCCTGAGACAA | + |
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Preference number: 4 (lower is better) Translates to: ANFTMNHTYNEGTEMGDYSSGRP*DLVLRQ Trigger: TTGTCTCAGGACCAAGTCCCAGGGCCTTCCACTGGA...ATAGTCTCCCATTTCAGTTCCTTCATTGTAAGTGTGATTCATGGTGAAGTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CCA 90 bp | GCAAACTTCACCATGAATCACACTTACAATGAAGGAACTGAAATGGGAGACTATATTGCTCTGCTCCAGTaGAAGGCCCTGGGACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: ANFTMNHTYNEGTEMGDYIALLQ*KALGLG Trigger: ACCAAGTCCCAGGGCCTTCCACTGGAGCAGAGCAAT...ATAGTCTCCCATTTCAGTTCCTTCATTGTAAGTGTGATTCATGGTGAAGTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| 3UTR CAA 72 bp | AATGGGAGACTATTCCAAGGAGCTTTGGAGATGGCTTaGAACCCTGTACATGCAAGTGAGGTAACCATTATA | + |
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Preference number: 4 (lower is better) Translates to: NGRLFQGALEMA*NPVHASEVTII Trigger: TATAATGGTTACCTCACTTGCATGTACAGGGTTCAAAGCCATCTCCAAAGCTCCTTGGAATAGTCTCCCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| 3UTR CAA 72 bp | CACCTACTAATTTCTTTGTTAGAGAAGAAACAGGTGTaGGGGATTTTACCACTTGAATTTCTAGGAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: HLLISLLEKKQV*GILPLEFLGTF Trigger: AAAAGTTCCTAGAAATTCAAGTGGTAAAATCCCCAACACCTGTTTCTTCTCTAACAAAGAAATTAGTAGGTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 90 bp | GGTGGGCTCGGCGGGCGCTTCCAACTCGGGCTGAGCCAGGGGCTCTaGGCACGCGGGCTCCTGGTGGAGGCGGCGGCGCTTGGCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GGLGGRFQLGLSQGL*ARGLLVEAAALGRA Trigger: AGCCCTGCCAAGCGCCGCCGCCTCCACCAGGAGCCCGCGTGCCCAGAGCCCCTGGCTCAGCCCGAGTTGGAAGCGCCCGCCGAGCCCACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 90 bp | GGGGCAACTGCAGGGCAGAGCCGGCGGCCAGGAACACCACGGAGGTaGTGGGCTCGGCGGGCGCTTCCAACTCGGGCTGAGCCAGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GATAGQSRRPGTPRR*WARRALPTRAEPGA Trigger: AGCCCCTGGCTCAGCCCGAGTTGGAAGCGCCCGCCGAGCCCACCACCTCCGTGGTGTTCCTGGCCGCCGGCTCTGCCCTGCAGTTGCCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 90 bp | GCAACTGCAGGGCAGAGCCGGCGGCCAGGAACACCACGGAGGTGGTaGGCTCGGCGGGCGCTTCCAACTCGGGCTGAGCCAGGGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ATAGQSRRPGTPRRW*ARRALPTRAEPGAL Trigger: CAGAGCCCCTGGCTCAGCCCGAGTTGGAAGCGCCCGCCGAGCCCACCACCTCCGTGGTGTTCCTGGCCGCCGGCTCTGCCCTGCAGTTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS GCA 90 bp | AGCCCCTCGGGGACCAGGAGGATGGTGTGTCCTTGGAGCGACACTTaGAGTACCGAGGTGGGCTCTGGCTCCAGCAGCAGGTCGACGCCG | + |
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Preference number: 5 (lower is better) Translates to: SPSGTRRMVCPWSDT*STEVGSGSSSRSTP Trigger: CGGCGTCGACCTGCTGCTGGAGCCAGAGCCCACCTCGGTACTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCCCGAGGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS GCA 90 bp | GCCCTGCGAGGAGCCCGGGGAGAGCATGGAGGGCATGGCGGAAGCTaGTCTTGGGGATTCCGGGAAGGAGATGGAGGCAGAGGCTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: ALRGARGEHGGHGGS*SWGFREGDGGRGCS Trigger: ACTGCAGCCTCTGCCTCCATCTCCTTCCCGGAATCCCCAAGAGCAGCTTCCGCCATGCCCTCCATGCTCTCCCCGGGCTCCTCGCAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 90 bp | CGAGGAGCCCGGGGAGAGCATGGAGGGCATGGCGGAAGCTGCTCTTaGGGATTCCGGGAAGGAGATGGAGGCAGAGGCTGCAGTGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: RGARGEHGGHGGSCS*GFREGDGGRGCSGE Trigger: CTCACCACTGCAGCCTCTGCCTCCATCTCCTTCCCGGAATCCCCAAGAGCAGCTTCCGCCATGCCCTCCATGCTCTCCCCGGGCTCCTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 90 bp | ATAGACCAGTCGCTTCCGGGCCCTGCGAGGAGCCCGGGGAGAGCATaGAGGGCATGGCGGAAGCTGCTCTTGGGGATTCCGGGAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: IDQSLPGPARSPGRA*RAWRKLLLGIPGRR Trigger: TCTCCTTCCCGGAATCCCCAAGAGCAGCTTCCGCCATGCCCTCCATGCTCTCCCCGGGCTCCTCGCAGGGCCCGGAAGCGACTGGTCTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 90 bp | GGAAGGCCCTGGGACTTGGTCCTGAGACAAAGGACTGGGCACCCCTaGGATGGAGGAAAAGTTCCCATTGGCCTGATCATCTGGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: GRPWDLVLRQRTGHP*DGGKVPIGLIIWRA Trigger: AGCCCTCCAGATGATCAGGCCAATGGGAACTTTTCCTCCATCCCAGGGGTGCCCAGTCCTTTGTCTCAGGACCAAGTCCCAGGGCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS TCA 90 bp | GGAGAATATTGCTCTGCTCCAGTGGAAGGCCCTGGGACTTGGTCCTaGGACAAAGGACTGGGCACCCCTGGGATGGAGGAAAAGTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GEYCSAPVEGPGTWS*DKGLGTPGMEEKFP Trigger: TGGGAACTTTTCCTCCATCCCAGGGGTGCCCAGTCCTTTGTCTCAGGACCAAGTCCCAGGGCCTTCCACTGGAGCAGAGCAATATTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 90 bp | GGGCACCCCTGGGATGGAGGAAAAGTTCCCATTGGCCTGATCATCTaGAGGGCTAGCCCAGTGCTCCAGAAATTCCAAGTCTGCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: GHPWDGGKVPIGLII*RASPVLQKFQVCIL Trigger: GAGGATGCAGACTTGGAATTTCTGGAGCACTGGGCTAGCCCTCCAGATGATCAGGCCAATGGGAACTTTTCCTCCATCCCAGGGGTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS TCA 90 bp | AAAGGACTGGGCACCCCTGGGATGGAGGAAAAGTTCCCATTGGCCTaGTCATCTGGAGGGCTAGCCCAGTGCTCCAGAAATTCCAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: KGLGTPGMEEKFPLA*SSGGLAQCSRNSKS Trigger: AGACTTGGAATTTCTGGAGCACTGGGCTAGCCCTCCAGATGATCAGGCCAATGGGAACTTTTCCTCCATCCCAGGGGTGCCCAGTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CAA 90 bp | GGCAGAGTGGCGCAAGACTTCGATCCCAGCACTTGGGAGGCAGAGGCAGGTAGAATCACAGACATCCTCTaGGTAGAAGTACTCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: GRVAQDFDPSTWEAEAGRITDIL*VEVLTE Trigger: TTCTGTGAGTACTTCTACCAAGAGGATGTCTGTGAT...TCTACCTGCCTCTGCCTCCCAAGTGCTGGGATCGAAGTCTTGCGCCACTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS GCA 90 bp | CATGTTGATGTCCAGTTCCCAGATGAACCTAGGAGAATATTGCTCTaGTCCAGTGGAAGGCCCTGGGACTTGGTCCTGAGACAAAGGACT | + |
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Preference number: 5 (lower is better) Translates to: HVDVQFPDEPRRILL*SSGRPWDLVLRQRT Trigger: AGTCCTTTGTCTCAGGACCAAGTCCCAGGGCCTTCCACTGGAGCAGAGCAATATTCTCCTAGGTTCATCTGGGAACTGGACATCAACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CAA 90 bp | AAACAAAGAAAACAAATGCATATCCCAGCGCATGCTGAAAACAGCCGGCAAACTTGGCGGAAGCTGCTCTaGGGGATTCCGGGAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: KQRKQMHIPAHAENSRQTWRKLL*GIPGRR Trigger: TCTCCTTCCCGGAATCCCCAAGAGCAGCTTCCGCCA...AGTTTGCCGGCTGTTTTCAGCATGCGCTGGGATATGCATTTGTTTTCTTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS GCA 90 bp | CTGATCATCTGGAGGGCTAGCCCAGTGCTCCAGAAATTCCAAGTCTaGATCCTCATCACAGACATCCTCTTGGTAGAAGTACTCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: LIIWRASPVLQKFQV*ILITDILLVEVLTE Trigger: TTCTGTGAGTACTTCTACCAAGAGGATGTCTGTGATGAGGATGCAGACTTGGAATTTCTGGAGCACTGGGCTAGCCCTCCAGATGATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CAA 90 bp | CTCTGCGAGTTCAAGACCAGCCTCTATTACATAGTTCTAAGAAAGCCACAGATTGGAAGGCCCTGGGACTaGGTCCTGAGACAAAGGACT | + |
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Preference number: 5 (lower is better) Translates to: LCEFKTSLYYIVLRKPQIGRPWD*VLRQRT Trigger: AGTCCTTTGTCTCAGGACCAAGTCCCAGGGCCTTCC...AATCTGTGGCTTTCTTAGAACTATGTAATAGAGGCTGGTCTTGAACTCGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CAA 90 bp | ACTTACAATGAAGGAACTGAAATGGGAGACTATTCCAAGGAGCTTTGGAGATGGAAGGGTCCCAGCATGTaGATGTCCAGTTCCCAGATG | + |
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Preference number: 5 (lower is better) Translates to: TYNEGTEMGDYSKELWRWKGPSM*MSSSQM Trigger: CATCTGGGAACTGGACATCAACATGCTGGGACCCTT...CCATCTCCAAAGCTCCTTGGAATAGTCTCCCATTTCAGTTCCTTCATTGTAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS-3UTR CAA 90 bp | CTCTGCGAGTTCAAGACCAGCCTCTATTACATAGTTCTAAGAAAGCCACAGATTGAACCTAGGAGAATATaGCTCTGCTCCAGTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LCEFKTSLYYIVLRKPQIEPRRI*LCSSGR Trigger: CCTTCCACTGGAGCAGAGCAATATTCTCCTAGGTTC...AATCTGTGGCTTTCTTAGAACTATGTAATAGAGGCTGGTCTTGAACTCGCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 72 bp | GGCGGGCGCTTCCAACTCGGGCTGAGCCAGGGGCTCTaGGCACGCGGGCTCCTGGTGGAGGCGGCGGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: GGRFQLGLSQGL*ARGLLVEAAAL Trigger: AAGCGCCGCCGCCTCCACCAGGAGCCCGCGTGCCCAGAGCCCCTGGCTCAGCCCGAGTTGGAAGCGCCCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS TCA 72 bp | GAGGTGGTGGGCTCGGCGGGCGCTTCCAACTCGGGCTaGGCCAGGGGCTCTGGGCACGCGGGCTCCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: EVVGSAGASNSG*ARGSGHAGSWW Trigger: CCACCAGGAGCCCGCGTGCCCAGAGCCCCTGGCTCAGCCCGAGTTGGAAGCGCCCGCCGAGCCCACCACCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 72 bp | GGGCAGAGCCGGCGGCCAGGAACACCACGGAGGTGGTaGGCTCGGCGGGCGCTTCCAACTCGGGCTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GQSRRPGTPRRW*ARRALPTRAEP Trigger: TGGCTCAGCCCGAGTTGGAAGCGCCCGCCGAGCCCACCACCTCCGTGGTGTTCCTGGCCGCCGGCTCTGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 72 bp | GCAGGGCAGAGCCGGCGGCCAGGAACACCACGGAGGTaGTGGGCTCGGCGGGCGCTTCCAACTCGGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AGQSRRPGTPRR*WARRALPTRAE Trigger: CTCAGCCCGAGTTGGAAGCGCCCGCCGAGCCCACCACCTCCGTGGTGTTCCTGGCCGCCGGCTCTGCCCTGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS TCA 72 bp | CCTGGGGCCCGTCCTGGGCAGCGGCTCCCTGCGGGCTaGTGGCCACGAATCCAGGCTGTCCAAAATGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PGARPGQRLPAG*WPRIQAVQNGW Trigger: CCACCCATTTTGGACAGCCTGGATTCGTGGCCATCAGCCCGCAGGGAGCCGCTGCCCAGGACGGGCCCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 72 bp | TCGCTTCCGGGCCCTGCGAGGAGCCCGGGGAGAGCATaGAGGGCATGGCGGAAGCTGCTCTTGGGGATTCCG | + |
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Preference number: 6 (lower is better) Translates to: SLPGPARSPGRA*RAWRKLLLGIP Trigger: CGGAATCCCCAAGAGCAGCTTCCGCCATGCCCTCCATGCTCTCCCCGGGCTCCTCGCAGGGCCCGGAAGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CAA 90 bp | GAGCCCCTCGGGGACCAGGAGGATGGTGTGTCCTTGGAGCGACACTaGCAGTACCGAGGTGGGCTCTGGCTCCAGCAGCAGGTCGACGCC | + |
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Preference number: 6 (lower is better) Translates to: EPLGDQEDGVSLERH*QYRGGLWLQQQVDA Trigger: GGCGTCGACCTGCTGCTGGAGCCAGAGCCCACCTCGGTACTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCCCGAGGGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 72 bp | TGGAGCCCCTCGGGGACCAGGAGGATGGTGTGTCCTTaGAGCGACACTTGCAGTACCGAGGTGGGCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: WSPSGTRRMVCP*SDTCSTEVGSG Trigger: GCCAGAGCCCACCTCGGTACTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCCCGAGGGGCTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CAA 72 bp | CCGGGGAGAGCATGGAGGGCATGGCGGAAGCTGCTCTaGGGGATTCCGGGAAGGAGATGGAGGCAGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PGRAWRAWRKLL*GIPGRRWRQRL Trigger: CAGCCTCTGCCTCCATCTCCTTCCCGGAATCCCCAAGAGCAGCTTCCGCCATGCCCTCCATGCTCTCCCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS GCA 72 bp | GGGACCAGGAGGATGGTGTGTCCTTGGAGCGACACTTaGAGTACCGAGGTGGGCTCTGGCTCCAGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GTRRMVCPWSDT*STEVGSGSSSR Trigger: CCTGCTGCTGGAGCCAGAGCCCACCTCGGTACTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CAA 72 bp | GGGGACCAGGAGGATGGTGTGTCCTTGGAGCGACACTaGCAGTACCGAGGTGGGCTCTGGCTCCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GDQEDGVSLERH*QYRGGLWLQQQ Trigger: CTGCTGCTGGAGCCAGAGCCCACCTCGGTACTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CAA 72 bp | TTGGAGCCCCTCGGGGACCAGGAGGATGGTGTGTCCTaGGAGCGACACTTGCAGTACCGAGGTGGGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LEPLGDQEDGVS*ERHLQYRGGLW Trigger: CCAGAGCCCACCTCGGTACTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCCCGAGGGGCTCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS TCA 72 bp | TACTCACAGAAAGTTTCCTCCTGGAGACCGACTAGATaGTCCTGGGGCCCGTCCTGGGCAGCGGCTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: YSQKVSSWRPTR*SWGPSWAAAPC Trigger: GCAGGGAGCCGCTGCCCAGGACGGGCCCCAGGATCATCTAGTCGGTCTCCAGGAGGAAACTTTCTGTGAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS TCA 72 bp | TGCTCTGCTCCAGTGGAAGGCCCTGGGACTTGGTCCTaGGACAAAGGACTGGGCACCCCTGGGATGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: CSAPVEGPGTWS*DKGLGTPGMEE Trigger: TTCCTCCATCCCAGGGGTGCCCAGTCCTTTGTCTCAGGACCAAGTCCCAGGGCCTTCCACTGGAGCAGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 72 bp | CCTAGGAGAATATTGCTCTGCTCCAGTGGAAGGCCCTaGGACTTGGTCCTGAGACAAAGGACTGGGCACCCC | + |
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Preference number: 6 (lower is better) Translates to: PRRILLCSSGRP*DLVLRQRTGHP Trigger: GGGGTGCCCAGTCCTTTGTCTCAGGACCAAGTCCCAGGGCCTTCCACTGGAGCAGAGCAATATTCTCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CAA 72 bp | AGAATATTGCTCTGCTCCAGTGGAAGGCCCTGGGACTaGGTCCTGAGACAAAGGACTGGGCACCCCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: RILLCSSGRPWD*VLRQRTGHPWD Trigger: ATCCCAGGGGTGCCCAGTCCTTTGTCTCAGGACCAAGTCCCAGGGCCTTCCACTGGAGCAGAGCAATATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CAA 90 bp | GAACCTAGGAGAATATTGCTCTGCTCCAGTGGAAGGCCCTGGGACTaGGTCCTGAGACAAAGGACTGGGCACCCCTGGGATGGAGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: EPRRILLCSSGRPWD*VLRQRTGHPWDGGK Trigger: TTTTCCTCCATCCCAGGGGTGCCCAGTCCTTTGTCTCAGGACCAAGTCCCAGGGCCTTCCACTGGAGCAGAGCAATATTCTCCTAGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS GCA 72 bp | GTCCAGTTCCCAGATGAACCTAGGAGAATATTGCTCTaGTCCAGTGGAAGGCCCTGGGACTTGGTCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VQFPDEPRRILL*SSGRPWDLVLR Trigger: TCTCAGGACCAAGTCCCAGGGCCTTCCACTGGAGCAGAGCAATATTCTCCTAGGTTCATCTGGGAACTGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CAA 72 bp | GGCTGCAGTGGTGAGCCAGGGAAGGGTCCCAGCATGTaGATGTCCAGTTCCCAGATGAACCTAGGAGAATAT | + |
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Preference number: 6 (lower is better) Translates to: GCSGEPGKGPSM*MSSSQMNLGEY Trigger: ATATTCTCCTAGGTTCATCTGGGAACTGGACATCAACATGCTGGGACCCTTCCCTGGCTCACCACTGCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS GCA 72 bp | TTGATGTCCAGTTCCCAGATGAACCTAGGAGAATATTaGTCTGCTCCAGTGGAAGGCCCTGGGACTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LMSSSQMNLGEY*SAPVEGPGTWS Trigger: GGACCAAGTCCCAGGGCCTTCCACTGGAGCAGAGCAATATTCTCCTAGGTTCATCTGGGAACTGGACATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CCA 72 bp | TGGGATGGAGGAAAAGTTCCCATTGGCCTGATCATCTaGAGGGCTAGCCCAGTGCTCCAGAAATTCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: WDGGKVPIGLII*RASPVLQKFQV Trigger: GACTTGGAATTTCTGGAGCACTGGGCTAGCCCTCCAGATGATCAGGCCAATGGGAACTTTTCCTCCATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CAA 90 bp | TCCCAGCATGTTGATGTCCAGTTCCCAGATGAACCTAGGAGAATATaGCTCTGCTCCAGTGGAAGGCCCTGGGACTTGGTCCTGAGACAA | + |
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Preference number: 6 (lower is better) Translates to: SQHVDVQFPDEPRRI*LCSSGRPWDLVLRQ Trigger: TTGTCTCAGGACCAAGTCCCAGGGCCTTCCACTGGAGCAGAGCAATATTCTCCTAGGTTCATCTGGGAACTGGACATCAACATGCTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS GCA 72 bp | TGGAGGGCTAGCCCAGTGCTCCAGAAATTCCAAGTCTaGATCCTCATCACAGACATCCTCTTGGTAGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: WRASPVLQKFQV*ILITDILLVEV Trigger: TACTTCTACCAAGAGGATGTCTGTGATGAGGATGCAGACTTGGAATTTCTGGAGCACTGGGCTAGCCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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| CDS CAA 72 bp | AAATTCCAAGTCTGCATCCTCATCACAGACATCCTCTaGGTAGAAGTACTCACAGAAAGTTTCCTCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: KFQVCILITDIL*VEVLTESFLLE Trigger: CTCCAGGAGGAAACTTTCTGTGAGTACTTCTACCAAGAGGATGTCTGTGATGAGGATGCAGACTTGGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167951.3 |
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