Pregenerated sensors for PRR23A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063058Ensembl transcript IDs: ENSMUST00000071302.3
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CAGGGCAGAGCCGGCGGCCAGGAACACCACGGAGGTGGTGGGCTCTaGGGGCGCTTCCAACTCGGGCTGAGCCAGGGGTTCTGGGCACGC | + |
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Preference number: 5 (lower is better) Translates to: QGRAGGQEHHGGGGL*GRFQLGLSQGFWAR Trigger: GCGTGCCCAGAACCCCTGGCTCAGCCCGAGTTGGAAGCGCCCGCAGAGCCCACCACCTCCGTGGTGTTCCTGGCCGCCGGCTCTGCCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS GCA 90 bp | GTGGGCTCAGGCTCCAACAGCAGGTCGATGCCATCCAGGGGCAACTaGAGGGCAGAGCCGGCGGCCAGGAACACCACGGAGGTGGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: VGSGSNSRSMPSRGN*RAEPAARNTTEVVG Trigger: GCCCACCACCTCCGTGGTGTTCCTGGCCGCCGGCTCTGCCCTGCAGTTGCCCCTGGATGGCATCGACCTGCTGTTGGAGCCTGAGCCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS GCA 90 bp | ACACTTGCAGGACCGAGGTGGGCTCAGGCTCCAACAGCAGGTCGATaGCATCCAGGGGCAACTGCAGGGCAGAGCCGGCGGCCAGGAACA | + |
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Preference number: 5 (lower is better) Translates to: TLAGPRWAQAPTAGR*HPGATAGQSRRPGT Trigger: TGTTCCTGGCCGCCGGCTCTGCCCTGCAGTTGCCCCTGGATGGCATCGACCTGCTGTTGGAGCCTGAGCCCACCTCGGTCCTGCAAGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CCA 90 bp | ATAGACCAGTCGCTTCCGGGCCTTGCAAGGAGCCCGGGGAGAGCATaGAGGGCATGGCGGAAGCTGCTCTTGGGGACTCTGGGAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: IDQSLPGLARSPGRA*RAWRKLLLGTLGRR Trigger: TCTCCTTCCCAGAGTCCCCAAGAGCAGCTTCCGCCATGCCCTCCATGCTCTCCCCGGGCTCCTTGCAAGGCCCGGAAGCGACTGGTCTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CCA 90 bp | GGGCACCCCTGGGATGGAGAAAAAGCTCCCATTGGCCTGATCATCTaGAGGCCTAGCCCAGGGTTCCAGGAATTCCAAGTCTGCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: GHPWDGEKAPIGLII*RPSPGFQEFQVCIL Trigger: GAGGATGCAGACTTGGAATTCCTGGAACCCTGGGCTAGGCCTCCAGATGATCAGGCCAATGGGAGCTTTTTCTCCATCCCAGGGGTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS GCA 90 bp | GGAGAATATCGCTCTGCTCCAGTGGAAGGCCCTGGGACTTGTTCCTaGAACAAAGGACTGGGCACCCCTGGGATGGAGAAAAAGCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GEYRSAPVEGPGTCS*NKGLGTPGMEKKLP Trigger: TGGGAGCTTTTTCTCCATCCCAGGGGTGCCCAGTCCTTTGTTGCAGGAACAAGTCCCAGGGCCTTCCACTGGAGCAGAGCGATATTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS TCA 90 bp | AAAGGACTGGGCACCCCTGGGATGGAGAAAAAGCTCCCATTGGCCTaGTCATCTGGAGGCCTAGCCCAGGGTTCCAGGAATTCCAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: KGLGTPGMEKKLPLA*SSGGLAQGSRNSKS Trigger: AGACTTGGAATTCCTGGAACCCTGGGCTAGGCCTCCAGATGATCAGGCCAATGGGAGCTTTTTCTCCATCCCAGGGGTGCCCAGTCCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CCA 72 bp | TGCGGGCGCTTCCAACTCGGGCTGAGCCAGGGGTTCTaGGCACGCGGGCTCCTGGTGGAGGCGGCGGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: CGRFQLGLSQGF*ARGLLVEAAAL Trigger: AAGCGCCGCCGCCTCCACCAGGAGCCCGCGTGCCCAGAACCCCTGGCTCAGCCCGAGTTGGAAGCGCCCGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS TCA 72 bp | GAGGTGGTGGGCTCTGCGGGCGCTTCCAACTCGGGCTaGGCCAGGGGTTCTGGGCACGCGGGCTCCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: EVVGSAGASNSG*ARGSGHAGSWW Trigger: CCACCAGGAGCCCGCGTGCCCAGAACCCCTGGCTCAGCCCGAGTTGGAAGCGCCCGCAGAGCCCACCACCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS GCA 72 bp | GCCGGCGGCCAGGAACACCACGGAGGTGGTGGGCTCTaGGGGCGCTTCCAACTCGGGCTGAGCCAGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: AGGQEHHGGGGL*GRFQLGLSQGF Trigger: GAACCCCTGGCTCAGCCCGAGTTGGAAGCGCCCGCAGAGCCCACCACCTCCGTGGTGTTCCTGGCCGCCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CCA 72 bp | CTGGGCACGCGGGCTCCTGGTGGAGGCGGCGGCGCTTaGCAGGGCTGGGTGCTGATGTCTGAGGTGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: LGTRAPGGGGGA*QGWVLMSEVTS Trigger: GCTGGTCACCTCAGACATCAGCACCCAGCCCTGCCAAGCGCCGCCGCCTCCACCAGGAGCCCGCGTGCCCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS GCA 72 bp | GGACCGAGGTGGGCTCAGGCTCCAACAGCAGGTCGATaGCATCCAGGGGCAACTGCAGGGCAGAGCCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GPRWAQAPTAGR*HPGATAGQSRR Trigger: CCGCCGGCTCTGCCCTGCAGTTGCCCCTGGATGGCATCGACCTGCTGTTGGAGCCTGAGCCCACCTCGGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS GCA 72 bp | GGCTCCAACAGCAGGTCGATGCCATCCAGGGGCAACTaGAGGGCAGAGCCGGCGGCCAGGAACACCACGGAG | + |
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Preference number: 6 (lower is better) Translates to: GSNSRSMPSRGN*RAEPAARNTTE Trigger: CTCCGTGGTGTTCCTGGCCGCCGGCTCTGCCCTGCAGTTGCCCCTGGATGGCATCGACCTGCTGTTGGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CCA 72 bp | ATGATCCTGGGGCCCGTCCTGGGCAGCGGCTCCCTGTaGGCTGATGGCCACGAATCCAGGCTGTCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: MILGPVLGSGSL*ADGHESRLSWL Trigger: CAGCCAGGACAGCCTGGATTCGTGGCCATCAGCCCACAGGGAGCCGCTGCCCAGGACGGGCCCCAGGATCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS GCA 72 bp | GGAGCCCGGGGAGAGCATGGAGGGCATGGCGGAAGCTaGTCTTGGGGACTCTGGGAAGGAGATGGAGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GARGEHGGHGGS*SWGLWEGDGGR Trigger: TCTGCCTCCATCTCCTTCCCAGAGTCCCCAAGAGCAGCTTCCGCCATGCCCTCCATGCTCTCCCCGGGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CCA 72 bp | GGCCTTGCAAGGAGCCCGGGGAGAGCATGGAGGGCATaGCGGAAGCTGCTCTTGGGGACTCTGGGAAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GLARSPGRAWRA*RKLLLGTLGRR Trigger: TCTCCTTCCCAGAGTCCCCAAGAGCAGCTTCCGCCATGCCCTCCATGCTCTCCCCGGGCTCCTTGCAAGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CAA 90 bp | GAGTCCCTCGGGGACCAGGAGGATGGTGTGTCCTTGGAGCGACACTaGCAGGACCGAGGTGGGCTCAGGCTCCAACAGCAGGTCGATGCC | + |
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Preference number: 6 (lower is better) Translates to: ESLGDQEDGVSLERH*QDRGGLRLQQQVDA Trigger: GGCATCGACCTGCTGTTGGAGCCTGAGCCCACCTCGGTCCTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCCCGAGGGACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS GCA 72 bp | GGGACCAGGAGGATGGTGTGTCCTTGGAGCGACACTTaGAGGACCGAGGTGGGCTCAGGCTCCAACAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GTRRMVCPWSDT*RTEVGSGSNSR Trigger: CCTGCTGTTGGAGCCTGAGCCCACCTCGGTCCTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CCA 72 bp | ATGAGTCCCTCGGGGACCAGGAGGATGGTGTGTCCTTaGAGCGACACTTGCAGGACCGAGGTGGGCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: MSPSGTRRMVCP*SDTCRTEVGSG Trigger: GCCTGAGCCCACCTCGGTCCTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCCCGAGGGACTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CCA 72 bp | TCCCTGTGGGCTGATGGCCACGAATCCAGGCTGTCCTaGCTGGGGTTGTGTCATGAGTCCCTCGGGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: SLWADGHESRLS*LGLCHESLGDQ Trigger: CTGGTCCCCGAGGGACTCATGACACAACCCCAGCCAGGACAGCCTGGATTCGTGGCCATCAGCCCACAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CAA 72 bp | GGGGACCAGGAGGATGGTGTGTCCTTGGAGCGACACTaGCAGGACCGAGGTGGGCTCAGGCTCCAACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GDQEDGVSLERH*QDRGGLRLQQQ Trigger: CTGCTGTTGGAGCCTGAGCCCACCTCGGTCCTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CAA 72 bp | CATGAGTCCCTCGGGGACCAGGAGGATGGTGTGTCCTaGGAGCGACACTTGCAGGACCGAGGTGGGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: HESLGDQEDGVS*ERHLQDRGGLR Trigger: CCTGAGCCCACCTCGGTCCTGCAAGTGTCGCTCCAAGGACACACCATCCTCCTGGTCCCCGAGGGACTCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS TCA 72 bp | CCACGAATCCAGGCTGTCCTGGCTGGGGTTGTGTCATaGGTCCCTCGGGGACCAGGAGGATGGTGTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PRIQAVLAGVVS*VPRGPGGWCVL Trigger: AAGGACACACCATCCTCCTGGTCCCCGAGGGACTCATGACACAACCCCAGCCAGGACAGCCTGGATTCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CCA 72 bp | TGGTGTGTCCTTGGAGCGACACTTGCAGGACCGAGGTaGGCTCAGGCTCCAACAGCAGGTCGATGCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: WCVLGATLAGPR*AQAPTAGRCHP Trigger: TGGATGGCATCGACCTGCTGTTGGAGCCTGAGCCCACCTCGGTCCTGCAAGTGTCGCTCCAAGGACACACCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS GCA 72 bp | CGCTCTGCTCCAGTGGAAGGCCCTGGGACTTGTTCCTaGAACAAAGGACTGGGCACCCCTGGGATGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: RSAPVEGPGTCS*NKGLGTPGMEK Trigger: TTTCTCCATCCCAGGGGTGCCCAGTCCTTTGTTGCAGGAACAAGTCCCAGGGCCTTCCACTGGAGCAGAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS TCA 72 bp | GGCACCCCTGGGATGGAGAAAAAGCTCCCATTGGCCTaGTCATCTGGAGGCCTAGCCCAGGGTTCCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: GTPGMEKKLPLA*SSGGLAQGSRN Trigger: ATTCCTGGAACCCTGGGCTAGGCCTCCAGATGATCAGGCCAATGGGAGCTTTTTCTCCATCCCAGGGGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CAA 90 bp | GGACCTAGGAGAATATCGCTCTGCTCCAGTGGAAGGCCCTGGGACTaGTTCCTGCAACAAAGGACTGGGCACCCCTGGGATGGAGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: GPRRISLCSSGRPWD*FLQQRTGHPWDGEK Trigger: TTTTTCTCCATCCCAGGGGTGCCCAGTCCTTTGTTGCAGGAACAAGTCCCAGGGCCTTCCACTGGAGCAGAGCGATATTCTCCTAGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CCA 72 bp | TGGGATGGAGAAAAAGCTCCCATTGGCCTGATCATCTaGAGGCCTAGCCCAGGGTTCCAGGAATTCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: WDGEKAPIGLII*RPSPGFQEFQV Trigger: GACTTGGAATTCCTGGAACCCTGGGCTAGGCCTCCAGATGATCAGGCCAATGGGAGCTTTTTCTCCATCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS GCA 72 bp | TGGAGGCCTAGCCCAGGGTTCCAGGAATTCCAAGTCTaGATCCTCATTACAGACATCCTCTTGGTAGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: WRPSPGFQEFQV*ILITDILLVEV Trigger: TACTTCTACCAAGAGGATGTCTGTAATGAGGATGCAGACTTGGAATTCCTGGAACCCTGGGCTAGGCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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| CDS CAA 72 bp | GAATTCCAAGTCTGCATCCTCATTACAGACATCCTCTaGGTAGAAGTACTCACAGGTTTCCTCCTGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: EFQVCILITDIL*VEVLTGFLLET Trigger: GGTCTCCAGGAGGAAACCTGTGAGTACTTCTACCAAGAGGATGTCTGTAATGAGGATGCAGACTTGGAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071302.3 |
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