Pregenerated sensors for PRR22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090273Ensembl transcript IDs: ENSMUST00000168666.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGCTCCCTGGAAGCCTCAATGGGCCTCATGGTCACCTGGGGTCCTaGGAACTGGCTGGCTTGGCCACCGAGATGGCCATAGGGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLPGSLNGPHGHLGS*ELAGLATEMAIGPG Trigger: CCCGGGCCCTATGGCCATCTCGGTGGCCAAGCCAGCCAGTTCCCAGGACCCCAGGTGACCATGAGGCCCATTGAGGCTTCCAGGGAGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 90 bp | CCACCTTGGGCTCTACAGGCCCGGGTGGGAATCGCAGACCTGGCCTaGCCACACCACTGCTCTGCAGCTCCCTGGAAGCCTCAATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPWALQARVGIADLA*PHHCSAAPWKPQWA Trigger: GGCCCATTGAGGCTTCCAGGGAGCTGCAGAGCAGTGGTGTGGCCAGGCCAGGTCTGCGATTCCCACCCGGGCCTGTAGAGCCCAAGGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 90 bp | TGGGTCCTGCAGCAGCGGCGGCGGCAGCTGTGTCAGCTGGGCCTGTaGTCTGCCTGTGTCTGCTGCCTGGCTTCCCTTTCTTGGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WVLQQRRRQLCQLGL*SACVCCLASLSWWA Trigger: TGCCCACCAAGAAAGGGAAGCCAGGCAGCAGACACAGGCAGACCACAGGCCCAGCTGACACAGCTGCCGCCGCCGCTGCTGCAGGACCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS TCA 90 bp | AGCCCAGAGCCTCAGGCACAGGCTCCTCCGCTGGAAGGTAATGTGTaGGGTACTGTGGCCCGCTGGGGGCCGGCTGGTAGTGGGGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SPEPQAQAPPLEGNV*GTVARWGPAGSGGT Trigger: TGTACCCCCACTACCAGCCGGCCCCCAGCGGGCCACAGTACCTCACACATTACCTTCCAGCGGAGGAGCCTGTGCCTGAGGCTCTGGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 90 bp | CTGGCCTGGCCACACCACTGCTCTGCAGCTCCCTGGAAGCCTCAATaGGCCTCATGGTCACCTGGGGTCCTGGGAACTGGCTGGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LAWPHHCSAAPWKPQ*ASWSPGVLGTGWLG Trigger: GCCAAGCCAGCCAGTTCCCAGGACCCCAGGTGACCATGAGGCCCATTGAGGCTTCCAGGGAGCTGCAGAGCAGTGGTGTGGCCAGGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 90 bp | GTGCAGGTTAGCATTGGCTACGGTGGGAAGGGGTTCTGGGCCACCTaGCACCTCAGGGCCCTCCAGGCTCTGCAGGCTGAAGCCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VQVSIGYGGKGFWAT*HLRALQALQAEAFL Trigger: CAGGAAGGCTTCAGCCTGCAGAGCCTGGAGGGCCCTGAGGTGCCAGGTGGCCCAGAACCCCTTCCCACCGTAGCCAATGCTAACCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 90 bp | CTTGGCCACCTTGGGCTCTACAGGCCCGGGTGGGAATCGCAGACCTaGCCTGGCCACACCACTGCTCTGCAGCTCCCTGGAAGCCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: LGHLGLYRPGWESQT*PGHTTALQLPGSLN Trigger: ATTGAGGCTTCCAGGGAGCTGCAGAGCAGTGGTGTGGCCAGGCCAGGTCTGCGATTCCCACCCGGGCCTGTAGAGCCCAAGGTGGCCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 90 bp | GAAGAAGCAGCCGCAGGGAGCCATCTGGAAGCCTGCTGGAGGGGCTaGAAGCACATCCTGGTCCGAGCCGGGGGTCTGATAGTGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EEAAAGSHLEACWRG*KHILVRAGGLIVQV Trigger: AACCTGCACTATCAGACCCCCGGCTCGGACCAGGATGTGCTTCCAGCCCCTCCAGCAGGCTTCCAGATGGCTCCCTGCGGCTGCTTCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS TCA 90 bp | GTTCTGGGCCACCTGGCACCTCAGGGCCCTCCAGGCTCTGCAGGCTaGAGCCTTCCTGGGATATGGCTGGGGGATACAGGGTTTTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VLGHLAPQGPPGSAG*SLPGIWLGDTGFWD Trigger: ATCCCAAAACCCTGTATCCCCCAGCCATATCCCAGGAAGGCTTCAGCCTGCAGAGCCTGGAGGGCCCTGAGGTGCCAGGTGGCCCAGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 90 bp | GGTCTGATAGTGCAGGTTAGCATTGGCTACGGTGGGAAGGGGTTCTaGGCCACCTGGCACCTCAGGGCCCTCCAGGCTCTGCAGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: GLIVQVSIGYGGKGF*ATWHLRALQALQAE Trigger: TTCAGCCTGCAGAGCCTGGAGGGCCCTGAGGTGCCAGGTGGCCCAGAACCCCTTCCCACCGTAGCCAATGCTAACCTGCACTATCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 90 bp | CAGCCACTGCCACTTTGTACAGGGATGACTGGCCAAAGTCGGAGGTaGCCCACTCGATGCGGTAGATTCGGGGGTCGAAGAAGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QPLPLCTGMTGQSRR*PTRCGRFGGRRSSR Trigger: GCGGCTGCTTCTTCGACCCCCGAATCTACCGCATCGAGTGGGCCACCTCCGACTTTGGCCAGTCATCCCTGTACAAAGTGGCAGTGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS GCA 90 bp | CTTTGTACAGGGATGACTGGCCAAAGTCGGAGGTGGCCCACTCGATaGGGTAGATTCGGGGGTCGAAGAAGCAGCCGCAGGGAGCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LCTGMTGQSRRWPTR*GRFGGRRSSRREPS Trigger: AGATGGCTCCCTGCGGCTGCTTCTTCGACCCCCGAATCTACCGCATCGAGTGGGCCACCTCCGACTTTGGCCAGTCATCCCTGTACAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS GCA 90 bp | GATAAGCAAGGGAGATGGCGTAGTCTCTTTGGGGGTTGGCGGAGGTaGCAGGCGGTCTCTGAGCATCTCCATGAAGTTGAGAGGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DKQGRWRSLFGGWRR*QAVSEHLHEVERPS Trigger: GGAGGGCCTCTCAACTTCATGGAGATGCTCAGAGACCGCCTGGCACCTCCGCCAACCCCCAAAGAGACTACGCCATCTCCCTTGCTTATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 90 bp | CCACCTCAGGCTCAGTGCCACCAGGGAGACAATCAAAAAGTTTCATaGCATCTTCGAGAAGGACCTTGTCCGGTAGGAAGAACGCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPQAQCHQGDNQKVS*HLREGPCPVGRTHV Trigger: CACGTGCGTTCTTCCTACCGGACAAGGTCCTTCTCGAAGATGCCATGAAACTTTTTGATTGTCTCCCTGGTGGCACTGAGCCTGAGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CAA 72 bp | CCTCATGGTCACCTGGGGTCCTGGGAACTGGCTGGCTaGGCCACCGAGATGGCCATAGGGCCCGGGTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHGHLGSWELAG*ATEMAIGPGWQ Trigger: CTGCCACCCGGGCCCTATGGCCATCTCGGTGGCCAAGCCAGCCAGTTCCCAGGACCCCAGGTGACCATGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CAA 90 bp | GCAGGCATGGTCTCCCCTGAGCCCACTGGGGTGACGTCCTCCACCTaGGCCACCTTGGGCTCTACAGGCCCGGGTGGGAATCGCAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: AGMVSPEPTGVTSST*ATLGSTGPGGNRRP Trigger: AGGTCTGCGATTCCCACCCGGGCCTGTAGAGCCCAAGGTGGCCAAGGTGGAGGACGTCACCCCAGTGGGCTCAGGGGAGACCATGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS TCA 72 bp | CCTCGGCAGGCATGGTCTCCCCTGAGCCCACTGGGGTaGCGTCCTCCACCTTGGCCACCTTGGGCTCTACAG | + |
|
Preference number: 6 (lower is better) Translates to: PRQAWSPLSPLG*RPPPWPPWALQ Trigger: CTGTAGAGCCCAAGGTGGCCAAGGTGGAGGACGTCACCCCAGTGGGCTCAGGGGAGACCATGCCTGCCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | GCTCTACAGGCCCGGGTGGGAATCGCAGACCTGGCCTaGCCACACCACTGCTCTGCAGCTCCCTGGAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALQARVGIADLA*PHHCSAAPWKP Trigger: AGGCTTCCAGGGAGCTGCAGAGCAGTGGTGTGGCCAGGCCAGGTCTGCGATTCCCACCCGGGCCTGTAGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | CTCCACCTTGGCCACCTTGGGCTCTACAGGCCCGGGTaGGAATCGCAGACCTGGCCTGGCCACACCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LHLGHLGLYRPG*ESQTWPGHTTA Trigger: AGCAGTGGTGTGGCCAGGCCAGGTCTGCGATTCCCACCCGGGCCTGTAGAGCCCAAGGTGGCCAAGGTGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CAA 72 bp | GAGCCCACTGGGGTGACGTCCTCCACCTTGGCCACCTaGGGCTCTACAGGCCCGGGTGGGAATCGCAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: EPTGVTSSTLAT*GSTGPGGNRRP Trigger: AGGTCTGCGATTCCCACCCGGGCCTGTAGAGCCCAAGGTGGCCAAGGTGGAGGACGTCACCCCAGTGGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CAA 72 bp | GTCTCCCCTGAGCCCACTGGGGTGACGTCCTCCACCTaGGCCACCTTGGGCTCTACAGGCCCGGGTGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: VSPEPTGVTSST*ATLGSTGPGGN Trigger: ATTCCCACCCGGGCCTGTAGAGCCCAAGGTGGCCAAGGTGGAGGACGTCACCCCAGTGGGCTCAGGGGAGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS GCA 72 bp | CGGGTGGGAATCGCAGACCTGGCCTGGCCACACCACTaGTCTGCAGCTCCCTGGAAGCCTCAATGGGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RVGIADLAWPHH*SAAPWKPQWAS Trigger: TGAGGCCCATTGAGGCTTCCAGGGAGCTGCAGAGCAGTGGTGTGGCCAGGCCAGGTCTGCGATTCCCACCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | AGCATTGGCTACGGTGGGAAGGGGTTCTGGGCCACCTaGCACCTCAGGGCCCTCCAGGCTCTGCAGGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SIGYGGKGFWAT*HLRALQALQAE Trigger: TTCAGCCTGCAGAGCCTGGAGGGCCCTGAGGTGCCAGGTGGCCCAGAACCCCTTCCCACCGTAGCCAATGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | AGGCTCCTCCGCTGGAAGGTAATGTGTGAGGTACTGTaGCCCGCTGGGGGCCGGCTGGTAGTGGGGGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: RLLRWKVMCEVL*PAGGRLVVGVQ Trigger: CTGTACCCCCACTACCAGCCGGCCCCCAGCGGGCCACAGTACCTCACACATTACCTTCCAGCGGAGGAGCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | GTTGATGGGACCGCAGGCCTGGGGCCACTGTGTCAGTaGCAGGGACCCCGAGATGCGGCACTGGTGGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VDGTAGLGPLCQ*QGPRDAALVVH Trigger: ATGAACCACCAGTGCCGCATCTCGGGGTCCCTGCCACTGACACAGTGGCCCCAGGCCTGCGGTCCCATCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS TCA 72 bp | GGCAGGACCCCCAGCCACTGCCACTTTGTACAGGGATaGCTGGCCAAAGTCGGAGGTGGCCCACTCGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: GRTPSHCHFVQG*LAKVGGGPLDA Trigger: CGCATCGAGTGGGCCACCTCCGACTTTGGCCAGTCATCCCTGTACAAAGTGGCAGTGGCTGGGGGTCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS GCA 72 bp | GGGATGACTGGCCAAAGTCGGAGGTGGCCCACTCGATaGGGTAGATTCGGGGGTCGAAGAAGCAGCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GMTGQSRRWPTR*GRFGGRRSSRR Trigger: CCTGCGGCTGCTTCTTCGACCCCCGAATCTACCGCATCGAGTGGGCCACCTCCGACTTTGGCCAGTCATCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS GCA 72 bp | GGGAATCGCAGACCTGGCCTGGCCACACCACTGCTCTaGAGCTCCCTGGAAGCCTCAATGGGCCTCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GNRRPGLATPLL*SSLEASMGLMV Trigger: GACCATGAGGCCCATTGAGGCTTCCAGGGAGCTGCAGAGCAGTGGTGTGGCCAGGCCAGGTCTGCGATTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS GCA 72 bp | CCTGGGGCCACTGTGTCAGTGGCAGGGACCCCGAGATaGGGCACTGGTGGTTCATCATCCAGGGCCTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGATVSVAGTPR*GTGGSSSRALK Trigger: CTTCAAGGCCCTGGATGATGAACCACCAGTGCCGCATCTCGGGGTCCCTGCCACTGACACAGTGGCCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | AGCTCCCTGGAAGCCTCAATGGGCCTCATGGTCACCTaGGGTCCTGGGAACTGGCTGGCTTGGCCACCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSLEASMGLMVT*GPGNWLAWPPR Trigger: TCTCGGTGGCCAAGCCAGCCAGTTCCCAGGACCCCAGGTGACCATGAGGCCCATTGAGGCTTCCAGGGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | TGCTCTGCAGCTCCCTGGAAGCCTCAATGGGCCTCATaGTCACCTGGGGTCCTGGGAACTGGCTGGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CSAAPWKPQWAS*SPGVLGTGWLG Trigger: GCCAAGCCAGCCAGTTCCCAGGACCCCAGGTGACCATGAGGCCCATTGAGGCTTCCAGGGAGCTGCAGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS GCA 72 bp | CAGCTGTGTCAGCTGGGCCTGTGGTCTGCCTGTGTCTaGTGCCTGGCTTCCCTTTCTTGGTGGGCATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QLCQLGLWSACV*CLASLSWWACW Trigger: CCAGCATGCCCACCAAGAAAGGGAAGCCAGGCAGCAGACACAGGCAGACCACAGGCCCAGCTGACACAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | GGAAGCCTCAATGGGCCTCATGGTCACCTGGGGTCCTaGGAACTGGCTGGCTTGGCCACCGAGATGGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: GSLNGPHGHLGS*ELAGLATEMAI Trigger: TATGGCCATCTCGGTGGCCAAGCCAGCCAGTTCCCAGGACCCCAGGTGACCATGAGGCCCATTGAGGCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | TCAGGGCCCTCCAGGCTCTGCAGGCTGAAGCCTTCCTaGGATATGGCTGGGGGATACAGGGTTTTGGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: SGPSRLCRLKPS*DMAGGYRVLGC Trigger: GCATCCCAAAACCCTGTATCCCCCAGCCATATCCCAGGAAGGCTTCAGCCTGCAGAGCCTGGAGGGCCCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | CGTGTGTGCCGTGGGGACTGTGATAAGCAAGGGAGATaGCGTAGTCTCTTTGGGGGTTGGCGGAGGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RVCRGDCDKQGR*RSLFGGWRRCQ Trigger: CTGGCACCTCCGCCAACCCCCAAAGAGACTACGCCATCTCCCTTGCTTATCACAGTCCCCACGGCACACACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | CCACTTTGTACAGGGATGACTGGCCAAAGTCGGAGGTaGCCCACTCGATGCGGTAGATTCGGGGGTCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PLCTGMTGQSRR*PTRCGRFGGRR Trigger: TCTTCGACCCCCGAATCTACCGCATCGAGTGGGCCACCTCCGACTTTGGCCAGTCATCCCTGTACAAAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | GATAAGCAAGGGAGATGGCGTAGTCTCTTTGGGGGTTaGCGGAGGTGCCAGGCGGTCTCTGAGCATCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: DKQGRWRSLFGG*RRCQAVSEHLH Trigger: ATGGAGATGCTCAGAGACCGCCTGGCACCTCCGCCAACCCCCAAAGAGACTACGCCATCTCCCTTGCTTATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | CTCGGGGACACTGTAGTCAAAGGACAGCAGGTCATCTaGCAGGTGCAGGGAGCGAATGTCGGTTGGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGDTVVKGQQVI*QVQGANVGWEV Trigger: GACTTCCCAACCGACATTCGCTCCCTGCACCTGCCAGATGACCTGCTGTCCTTTGACTACAGTGTCCCCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | TGTGTCAGTGGCAGGGACCCCGAGATGCGGCACTGGTaGTTCATCATCCAGGGCCTTGAAGCTGAAAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: CVSGRDPEMRHW*FIIQGLEAEKV Trigger: TACTTTTTCAGCTTCAAGGCCCTGGATGATGAACCACCAGTGCCGCATCTCGGGGTCCCTGCCACTGACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||
| CDS CCA 72 bp | GCTCAGTGCCACCAGGGAGACAATCAAAAAGTTTCATaGCATCTTCGAGAAGGACCTTGTCCGGTAGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: AQCHQGDNQKVS*HLREGPCPVGR Trigger: TCTTCCTACCGGACAAGGTCCTTCTCGAAGATGCCATGAAACTTTTTGATTGTCTCCCTGGTGGCACTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168666.3 |
||