Pregenerated sensors for PRR19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058741Ensembl transcript IDs: ENSMUST00000080288.5
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCGACTGGATATGGGAGGATCCTGACGGGCCAATGGCCTGTGGCTaGTCACCAGGGCCTTATTTCGCTCCCTCCTGGTCTTGCGACGGC | + |
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Preference number: 5 (lower is better) Translates to: PDWIWEDPDGPMACG*SPGPYFAPSWSCDG Trigger: GCCGTCGCAAGACCAGGAGGGAGCGAAATAAGGCCCTGGTGAGCAGCCACAGGCCATTGGCCCGTCAGGATCCTCCCATATCCAGTCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 90 bp | CTCTGTCTCTCAGGGACCCTCGGTTTGGCCTCAGGCAAGGGTAGCTaGCAACCTCGGAGCACCAGGGCAAGATCAGGCACACAGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: LCLSGTLGLASGKGS*QPRSTRARSGTQPW Trigger: CCATGGCTGTGTGCCTGATCTTGCCCTGGTGCTCCGAGGTTGCCAGCTACCCTTGCCTGAGGCCAAACCGAGGGTCCCTGAGAGACAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 90 bp | GCCTGTGGCTGCTCACCAGGGCCTTATTTCGCTCCCTCCTGGTCTTaGGACGGCGAATTCGGCCAGGTTTCTGAAGCTGCTGGAAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: ACGCSPGPYFAPSWS*DGEFGQVSEAAGKA Trigger: AGCCTTTCCAGCAGCTTCAGAAACCTGGCCGAATTCGCCGTCGCAAGACCAGGAGGGAGCGAAATAAGGCCCTGGTGAGCAGCCACAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 90 bp | CCAATGGCCTGTGGCTGCTCACCAGGGCCTTATTTCGCTCCCTCCTaGTCTTGCGACGGCGAATTCGGCCAGGTTTCTGAAGCTGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PMACGCSPGPYFAPS*SCDGEFGQVSEAAG Trigger: TCCAGCAGCTTCAGAAACCTGGCCGAATTCGCCGTCGCAAGACCAGGAGGGAGCGAAATAAGGCCCTGGTGAGCAGCCACAGGCCATTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 90 bp | CACACATGGATCCCGACTGGATATGGGAGGATCCTGACGGGCCAATaGCCTGTGGCTGCTCACCAGGGCCTTATTTCGCTCCCTCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: HTWIPTGYGRILTGQ*PVAAHQGLISLPPG Trigger: ACCAGGAGGGAGCGAAATAAGGCCCTGGTGAGCAGCCACAGGCCATTGGCCCGTCAGGATCCTCCCATATCCAGTCGGGATCCATGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS TCA 90 bp | TCCTGGAGGATCACACATGGATCCCGACTGGATATGGGAGGATCCTaGCGGGCCAATGGCCTGTGGCTGCTCACCAGGGCCTTATTTCGC | + |
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Preference number: 5 (lower is better) Translates to: SWRITHGSRLDMGGS*RANGLWLLTRALFR Trigger: GCGAAATAAGGCCCTGGTGAGCAGCCACAGGCCATTGGCCCGTCAGGATCCTCCCATATCCAGTCGGGATCCATGTGTGATCCTCCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS TCA 90 bp | ACCTCATGGTTGAAGAGACCCCGGTGCTCCCGGCTCAACCTGCCTTaGGTTATCACAACAAGCTTGGGGGCTGCAGAGGCCACAGGATCC | + |
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Preference number: 5 (lower is better) Translates to: TSWLKRPRCSRLNLP*VITTSLGAAEATGS Trigger: GGATCCTGTGGCCTCTGCAGCCCCCAAGCTTGTTGTGATAACTCAAGGCAGGTTGAGCCGGGAGCACCGGGGTCTCTTCAACCATGAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 90 bp | CCCGGTGCTCCCGGCTCAACCTGCCTTGAGTTATCACAACAAGCTTaGGGGCTGCAGAGGCCACAGGATCCTGGAGGATCACACATGGAT | + |
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Preference number: 5 (lower is better) Translates to: PGAPGSTCLELSQQA*GLQRPQDPGGSHMD Trigger: ATCCATGTGTGATCCTCCAGGATCCTGTGGCCTCTGCAGCCCCCAAGCTTGTTGTGATAACTCAAGGCAGGTTGAGCCGGGAGCACCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 90 bp | CTCCCGGCTCAACCTGCCTTGAGTTATCACAACAAGCTTGGGGGCTaGAGAGGCCACAGGATCCTGGAGGATCACACATGGATCCCGACT | + |
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Preference number: 5 (lower is better) Translates to: LPAQPALSYHNKLGG*RGHRILEDHTWIPT Trigger: AGTCGGGATCCATGTGTGATCCTCCAGGATCCTGTGGCCTCTGCAGCCCCCAAGCTTGTTGTGATAACTCAAGGCAGGTTGAGCCGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 90 bp | AGCTGGCAACCTCGGAGCACCAGGGCAAGATCAGGCACACAGCCATaGCAGCCCTGTAAGGTTCTTATGATGGTGTCTCTGGACTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SWQPRSTRARSGTQP*QPCKVLMMVSLDSC Trigger: GCAGGAGTCCAGAGACACCATCATAAGAACCTTACAGGGCTGCCATGGCTGTGTGCCTGATCTTGCCCTGGTGCTCCGAGGTTGCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 90 bp | CTTCCCCTCCCGTGGAGCATGCTCAGGAACTTCCATACAAGAAGATaGCATCCTCTGTCTCTCAGGGACCCTCGGTTTGGCCTCAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: LPLPWSMLRNFHTRR*HPLSLRDPRFGLRQ Trigger: TTGCCTGAGGCCAAACCGAGGGTCCCTGAGAGACAGAGGATGGCATCTTCTTGTATGGAAGTTCCTGAGCATGCTCCACGGGAGGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS TCA 90 bp | CCTGGGCCTGAGCCTCCTGGTACCTTGTTCTCCTTGCCTTTTGACTaGAGGTCTGGTTCTTGTACTCCAACTGGACTGCAGGAGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: PGPEPPGTLFSLPFD*RSGSCTPTGLQEGL Trigger: CAAGCCCTCCTGCAGTCCAGTTGGAGTACAAGAACCAGACCTTCAGTCAAAAGGCAAGGAGAACAAGGTACCAGGAGGCTCAGGCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS TCA 90 bp | GGGCAAGATCAGGCACACAGCCATGGCAGCCCTGTAAGGTTCTTATaGTGGTGTCTCTGGACTCCTGCACTAGGTTTCTCCTGGGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: GQDQAHSHGSPVRFL*WCLWTPALGFSWER Trigger: CCTTTCCCAGGAGAAACCTAGTGCAGGAGTCCAGAGACACCATCATAAGAACCTTACAGGGCTGCCATGGCTGTGTGCCTGATCTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 90 bp | AGTGCTGTTGCAAGTATGAGGTATGGCAAAGTCACACCCCTTTGTTaGCTGCTGAGTCCTTTGCTTCCCCTCCCGTGGAGCATGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SAVASMRYGKVTPLC*LLSPLLPLPWSMLR Trigger: CCTGAGCATGCTCCACGGGAGGGGAAGCAAAGGACTCAGCAGGCAACAAAGGGGTGTGACTTTGCCATACCTCATACTTGCAACAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 90 bp | GTCACACCCCTTTGTTGCCTGCTGAGTCCTTTGCTTCCCCTCCCGTaGAGCATGCTCAGGAACTTCCATACAAGAAGATGCCATCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: VTPLCCLLSPLLPLP*SMLRNFHTRRCHPL Trigger: CAGAGGATGGCATCTTCTTGTATGGAAGTTCCTGAGCATGCTCCACGGGAGGGGAAGCAAAGGACTCAGCAGGCAACAAAGGGGTGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 90 bp | AATTTGGTGGGCCTGGGCCTGAGCCTCCTGGTACCTTGTTCTCCTTaGCTTTTGACTGAAGGTCTGGTTCTTGTACTCCAACTGGACTGC | + |
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Preference number: 5 (lower is better) Translates to: NLVGLGLSLLVPCSP*LLTEGLVLVLQLDC Trigger: GCAGTCCAGTTGGAGTACAAGAACCAGACCTTCAGTCAAAAGGCAAGGAGAACAAGGTACCAGGAGGCTCAGGCCCAGGCCCACCAAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS TCA 72 bp | GCAGCCGGGCCACATCCAGGGATTTCACCTCATGGTTaGAGAGACCCCGGTGCTCCCGGCTCAACCTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: AAGPHPGISPHG*RDPGAPGSTCL Trigger: AAGGCAGGTTGAGCCGGGAGCACCGGGGTCTCTTCAACCATGAGGTGAAATCCCTGGATGTGGCCCGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 72 bp | TCAGGGACCCTCGGTTTGGCCTCAGGCAAGGGTAGCTaGCAACCTCGGAGCACCAGGGCAAGATCAGGCACA | + |
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Preference number: 6 (lower is better) Translates to: SGTLGLASGKGS*QPRSTRARSGT Trigger: TGTGCCTGATCTTGCCCTGGTGCTCCGAGGTTGCCAGCTACCCTTGCCTGAGGCCAAACCGAGGGTCCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CAA 72 bp | AGCAGCCGGGCCACATCCAGGGATTTCACCTCATGGTaGAAGAGACCCCGGTGCTCCCGGCTCAACCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSRATSRDFTSW*KRPRCSRLNLP Trigger: AGGCAGGTTGAGCCGGGAGCACCGGGGTCTCTTCAACCATGAGGTGAAATCCCTGGATGTGGCCCGGCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS TCA 72 bp | ATCACACATGGATCCCGACTGGATATGGGAGGATCCTaGCGGGCCAATGGCCTGTGGCTGCTCACCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ITHGSRLDMGGS*RANGLWLLTRA Trigger: GGCCCTGGTGAGCAGCCACAGGCCATTGGCCCGTCAGGATCCTCCCATATCCAGTCGGGATCCATGTGTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CAA 72 bp | GAAGATGCCATCCTCTGTCTCTCAGGGACCCTCGGTTaGGCCTCAGGCAAGGGTAGCTGGCAACCTCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: EDAILCLSGTLG*ASGKGSWQPRS Trigger: GCTCCGAGGTTGCCAGCTACCCTTGCCTGAGGCCAAACCGAGGGTCCCTGAGAGACAGAGGATGGCATCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS TCA 72 bp | TTGAAGAGACCCCGGTGCTCCCGGCTCAACCTGCCTTaGGTTATCACAACAAGCTTGGGGGCTGCAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LKRPRCSRLNLP*VITTSLGAAEA Trigger: GGCCTCTGCAGCCCCCAAGCTTGTTGTGATAACTCAAGGCAGGTTGAGCCGGGAGCACCGGGGTCTCTTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 72 bp | ATATGGGAGGATCCTGACGGGCCAATGGCCTGTGGCTaGTCACCAGGGCCTTATTTCGCTCCCTCCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: IWEDPDGPMACG*SPGPYFAPSWS Trigger: AGACCAGGAGGGAGCGAAATAAGGCCCTGGTGAGCAGCCACAGGCCATTGGCCCGTCAGGATCCTCCCATAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 72 bp | ATCCCGACTGGATATGGGAGGATCCTGACGGGCCAATaGCCTGTGGCTGCTCACCAGGGCCTTATTTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: IPTGYGRILTGQ*PVAAHQGLISL Trigger: GAGCGAAATAAGGCCCTGGTGAGCAGCCACAGGCCATTGGCCCGTCAGGATCCTCCCATATCCAGTCGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 72 bp | TTAAGCAGCCGGGCCACATCCAGGGATTTCACCTCATaGTTGAAGAGACCCCGGTGCTCCCGGCTCAACCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSRATSRDFTS*LKRPRCSRLNL Trigger: CAGGTTGAGCCGGGAGCACCGGGGTCTCTTCAACCATGAGGTGAAATCCCTGGATGTGGCCCGGCTGCTTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 72 bp | AAGATGCCATCCTCTGTCTCTCAGGGACCCTCGGTTTaGCCTCAGGCAAGGGTAGCTGGCAACCTCGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: KMPSSVSQGPSV*PQARVAGNLGA Trigger: TGCTCCGAGGTTGCCAGCTACCCTTGCCTGAGGCCAAACCGAGGGTCCCTGAGAGACAGAGGATGGCATCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 72 bp | CAGGAGGGTTGGGGCTCCAGTCCAAGGCAGATGTTCTaGGTAACAAGGGTGATGGTGGCTGTGGTAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: QEGWGSSPRQMF*VTRVMVAVVGA Trigger: AGCCCCTACCACAGCCACCATCACCCTTGTTACCCAGAACATCTGCCTTGGACTGGAGCCCCAACCCTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CAA 72 bp | GTTGAAGAGACCCCGGTGCTCCCGGCTCAACCTGCCTaGAGTTATCACAACAAGCTTGGGGGCTGCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: VEETPVLPAQPA*SYHNKLGGCRG Trigger: GCCTCTGCAGCCCCCAAGCTTGTTGTGATAACTCAAGGCAGGTTGAGCCGGGAGCACCGGGGTCTCTTCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CAA 90 bp | CACCTCATGGTTGAAGAGACCCCGGTGCTCCCGGCTCAACCTGCCTaGAGTTATCACAACAAGCTTGGGGGCTGCAGAGGCCACAGGATC | + |
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Preference number: 6 (lower is better) Translates to: HLMVEETPVLPAQPA*SYHNKLGGCRGHRI Trigger: GATCCTGTGGCCTCTGCAGCCCCCAAGCTTGTTGTGATAACTCAAGGCAGGTTGAGCCGGGAGCACCGGGGTCTCTTCAACCATGAGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS TCA 72 bp | GATGGTGATGATGCTGAGGACAGGAATGGCAGTTGGTaGCCTGGAGGTTGCACCTGGCTGCCCCTGTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: DGDDAEDRNGSW*PGGCTWLPLCA Trigger: TGCACACAGGGGCAGCCAGGTGCAACCTCCAGGTCACCAACTGCCATTCCTGTCCTCAGCATCATCACCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 72 bp | TGCTCACCAGGGCCTTATTTCGCTCCCTCCTGGTCTTaGGACGGCGAATTCGGCCAGGTTTCTGAAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: CSPGPYFAPSWS*DGEFGQVSEAA Trigger: AGCAGCTTCAGAAACCTGGCCGAATTCGCCGTCGCAAGACCAGGAGGGAGCGAAATAAGGCCCTGGTGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 72 bp | TTGGTGACCTGGAGGTTGCACCTGGCTGCCCCTGTGTaGAGGGGTAGTGCTGTTGCAAGTATGAGGTATGGC | + |
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Preference number: 6 (lower is better) Translates to: LVTWRLHLAAPV*RGSAVASMRYG Trigger: GCCATACCTCATACTTGCAACAGCACTACCCCTGCACACAGGGGCAGCCAGGTGCAACCTCCAGGTCACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 72 bp | TGTGGCTGCTCACCAGGGCCTTATTTCGCTCCCTCCTaGTCTTGCGACGGCGAATTCGGCCAGGTTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: CGCSPGPYFAPS*SCDGEFGQVSE Trigger: TTCAGAAACCTGGCCGAATTCGCCGTCGCAAGACCAGGAGGGAGCGAAATAAGGCCCTGGTGAGCAGCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 72 bp | CCCGGCTCAACCTGCCTTGAGTTATCACAACAAGCTTaGGGGCTGCAGAGGCCACAGGATCCTGGAGGATCA | + |
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Preference number: 6 (lower is better) Translates to: PGSTCLELSQQA*GLQRPQDPGGS Trigger: TGATCCTCCAGGATCCTGTGGCCTCTGCAGCCCCCAAGCTTGTTGTGATAACTCAAGGCAGGTTGAGCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CAA 90 bp | GTGGGCCTGGGCCTGAGCCTCCTGGTACCTTGTTCTCCTTGCCTTTaGACTGAAGGTCTGGTTCTTGTACTCCAACTGGACTGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: VGLGLSLLVPCSPCL*TEGLVLVLQLDCRR Trigger: CCTCCTGCAGTCCAGTTGGAGTACAAGAACCAGACCTTCAGTCAAAAGGCAAGGAGAACAAGGTACCAGGAGGCTCAGGCCCAGGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CAA 90 bp | GCAACTCCTCCAGCAATTGCCCCAACACAGGAAGATCTGGAGAATTaGGTGGGCCTGGGCCTGAGCCTCCTGGTACCTTGTTCTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: ATPPAIAPTQEDLEN*VGLGLSLLVPCSPC Trigger: GCAAGGAGAACAAGGTACCAGGAGGCTCAGGCCCAGGCCCACCAAATTCTCCAGATCTTCCTGTGTTGGGGCAATTGCTGGAGGAGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 72 bp | CCTCGGAGCACCAGGGCAAGATCAGGCACACAGCCATaGCAGCCCTGTAAGGTTCTTATGATGGTGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: PRSTRARSGTQP*QPCKVLMMVSL Trigger: CAGAGACACCATCATAAGAACCTTACAGGGCTGCCATGGCTGTGTGCCTGATCTTGCCCTGGTGCTCCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CAA 72 bp | CCAGCAATTGCCCCAACACAGGAAGATCTGGAGAATTaGGTGGGCCTGGGCCTGAGCCTCCTGGTACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PAIAPTQEDLEN*VGLGLSLLVPC Trigger: ACAAGGTACCAGGAGGCTCAGGCCCAGGCCCACCAAATTCTCCAGATCTTCCTGTGTTGGGGCAATTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 72 bp | CCGTGGAGCATGCTCAGGAACTTCCATACAAGAAGATaGCATCCTCTGTCTCTCAGGGACCCTCGGTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: PWSMLRNFHTRR*HPLSLRDPRFG Trigger: GCCAAACCGAGGGTCCCTGAGAGACAGAGGATGGCATCTTCTTGTATGGAAGTTCCTGAGCATGCTCCACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 72 bp | GCAAGTATGAGGTATGGCAAAGTCACACCCCTTTGTTaGCTGCTGAGTCCTTTGCTTCCCCTCCCGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASMRYGKVTPLC*LLSPLLPLPWS Trigger: GCTCCACGGGAGGGGAAGCAAAGGACTCAGCAGGCAACAAAGGGGTGTGACTTTGCCATACCTCATACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS TCA 72 bp | ACTCCAACTGGACTGCAGGAGGGCTTGGTTGGTAGCTaGGGGGTATGTGATTCCAAGGCACCTCTGTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: TPTGLQEGLVGS*GVCDSKAPLLS Trigger: GCTTAACAGAGGTGCCTTGGAATCACATACCCCTCAGCTACCAACCAAGCCCTCCTGCAGTCCAGTTGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 72 bp | GGCCTGGGCCTGAGCCTCCTGGTACCTTGTTCTCCTTaGCTTTTGACTGAAGGTCTGGTTCTTGTACTCCAA | + |
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Preference number: 6 (lower is better) Translates to: GLGLSLLVPCSP*LLTEGLVLVLQ Trigger: TTGGAGTACAAGAACCAGACCTTCAGTCAAAAGGCAAGGAGAACAAGGTACCAGGAGGCTCAGGCCCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CCA 72 bp | CTGGTTCTTGTACTCCAACTGGACTGCAGGAGGGCTTaGTTGGTAGCTGAGGGGTATGTGATTCCAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LVLVLQLDCRRA*LVAEGYVIPRH Trigger: GTGCCTTGGAATCACATACCCCTCAGCTACCAACCAAGCCCTCCTGCAGTCCAGTTGGAGTACAAGAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CAA 72 bp | TGCAAGTATGAGGTATGGCAAAGTCACACCCCTTTGTaGCCTGCTGAGTCCTTTGCTTCCCCTCCCGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: CKYEVWQSHTPL*PAESFASPPVE Trigger: CTCCACGGGAGGGGAAGCAAAGGACTCAGCAGGCAACAAAGGGGTGTGACTTTGCCATACCTCATACTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CAA 90 bp | AAAGGCTTGTGGCACAATGAGTTGGTACTGCAACTCCTCCAGCAATaGCCCCAACACAGGAAGATCTGGAGAATTTGGTGGGCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: KGLWHNELVLQLLQQ*PQHRKIWRIWWAWA Trigger: GGCCCAGGCCCACCAAATTCTCCAGATCTTCCTGTGTTGGGGCAATTGCTGGAGGAGTTGCAGTACCAACTCATTGTGCCACAAGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS CAA 72 bp | GGCCTGAGCCTCCTGGTACCTTGTTCTCCTTGCCTTTaGACTGAAGGTCTGGTTCTTGTACTCCAACTGGAC | + |
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Preference number: 6 (lower is better) Translates to: GLSLLVPCSPCL*TEGLVLVLQLD Trigger: GTCCAGTTGGAGTACAAGAACCAGACCTTCAGTCAAAAGGCAAGGAGAACAAGGTACCAGGAGGCTCAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS TCA 72 bp | GAGCCTCCTGGTACCTTGTTCTCCTTGCCTTTTGACTaGAGGTCTGGTTCTTGTACTCCAACTGGACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: EPPGTLFSLPFD*RSGSCTPTGLQ Trigger: CTGCAGTCCAGTTGGAGTACAAGAACCAGACCTTCAGTCAAAAGGCAAGGAGAACAAGGTACCAGGAGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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| CDS GCA 72 bp | CCCTGTAAGGTTCTTATGATGGTGTCTCTGGACTCCTaGACTAGGTTTCTCCTGGGAAAGGCTTGTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: PCKVLMMVSLDS*TRFLLGKACGT Trigger: TGTGCCACAAGCCTTTCCCAGGAGAAACCTAGTGCAGGAGTCCAGAGACACCATCATAAGAACCTTACAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080288.5 |
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