Pregenerated sensors for PRR18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055945Ensembl transcript IDs: ENSMUST00000069742.8, ENSMUST00000163887.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGACGGGATAAAGCCGTGCTGTGCCAGGCTGGAGGGCAGAGGCAGTaGCCTCACCACCCAACTTGCCTAGAGGAACAGCCCTTCCACCCC | + |
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Preference number: 1 (lower is better) Translates to: RRDKAVLCQAGGQRQ*PHHPTCLEEQPFHP Trigger: GGGGTGGAAGGGCTGTTCCTCTAGGCAAGTTGGGTGGTGAGGGCACTGCCTCTGCCCTCCAGCCTGGCACAGCACGGCTTTATCCCGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR CCA 90 bp | CTGGGGAAGGTACCAGGCAATAGTCCTGTCCCTTGCTGGCCTACCTaGTTCACAAGAGCCCAGGTGTGCAAGGAGCCCAGGAGGCGGCCG | + |
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Preference number: 1 (lower is better) Translates to: LGKVPGNSPVPCWPT*FTRAQVCKEPRRRP Trigger: CGGCCGCCTCCTGGGCTCCTTGCACACCTGGGCTCTTGTGAACCAGGTAGGCCAGCAAGGGACAGGACTATTGCCTGGTACCTTCCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR GCA 90 bp | CCTGCTTCCGCCTCAAACTGCTCCGTGGGCAGGCTTGCCCTGCCTTaGTTTCACCCACCGACGTCCTCTGTGCTGAGAAGTTCCTTCCCT | + |
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Preference number: 1 (lower is better) Translates to: PASASNCSVGRLALP*FHPPTSSVLRSSFP Trigger: AGGGAAGGAACTTCTCAGCACAGAGGACGTCGGTGGGTGAAAGCAAGGCAGGGCAAGCCTGCCCACGGAGCAGTTTGAGGCGGAAGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR GCA 90 bp | ACAGTGATGAGAGAGAGACACCTGCCCTGGCCCACAACTACTTCCTaGTTCCGCCTCAAACTGCTCCGTGGGCAGGCTTGCCCTGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: TVMRERHLPWPTTTS*FRLKLLRGQACPAL Trigger: CAAGGCAGGGCAAGCCTGCCCACGGAGCAGTTTGAGGCGGAAGCAGGAAGTAGTTGTGGGCCAGGGCAGGTGTCTCTCTCTCATCACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR TCA 90 bp | GTGCATAGCCATGGGAGTGGAGTGTGTGTAAGTGTCTGGGATGGCTaGGTACTAGCTGGCAGGCGGAGCACAAGTCCTCCTGGATCACCC | + |
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Preference number: 1 (lower is better) Translates to: VHSHGSGVCVSVWDG*VLAGRRSTSPPGSP Trigger: GGGTGATCCAGGAGGACTTGTGCTCCGCCTGCCAGCTAGTACTCAGCCATCCCAGACACTTACACACACTCCACTCCCATGGCTATGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR TCA 90 bp | CTTTCTGGTGTTGTTAGGGCTGCTGGGGGCAGGAAGCCAAGCACGTaGAGTACTGGCATTTGCGCTGAGTGCAGACGGGATAAAGCCGTG | + |
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Preference number: 1 (lower is better) Translates to: LSGVVRAAGGRKPST*STGICAECRRDKAV Trigger: CACGGCTTTATCCCGTCTGCACTCAGCGCAAATGCCAGTACTTCACGTGCTTGGCTTCCTGCCCCCAGCAGCCCTAACAACACCAGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR GCA 90 bp | TGTCCTCAGAATGTCAGCAACGAGGTAGAGACCCCGCAAGTCACGTaGAGGCCTTCCTTTCCTTACAGAGAGTCATCGGCCGCCCAACAC | + |
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Preference number: 1 (lower is better) Translates to: CPQNVSNEVETPQVT*RPSFPYRESSAAQH Trigger: GTGTTGGGCGGCCGATGACTCTCTGTAAGGAAAGGAAGGCCTGCACGTGACTTGCGGGGTCTCTACCTCGTTGCTGACATTCTGAGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR CCA 90 bp | CCCTCTGTAAGGCCTCTTGGTTGGCAAAGCTTGCACCAAGAAGGATaGAGAGGAGAGATGGAGACAGAGAGAGAGAGAGAGAGAGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: PSVRPLGWQSLHQEG*RGEMETERERERES Trigger: GCTCTCTCTCTCTCTCTCTCTCTCTGTCTCCATCTCTCCTCTCCATCCTTCTTGGTGCAAGCTTTGCCAACCAAGAGGCCTTACAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR CCA 90 bp | AGTACTAGCTGGCAGGCGGAGCACAAGTCCTCCTGGATCACCCAGTaGCAACAGTACACTGTTTCAGGGATGCTGGATTACAAGTTTAGT | + |
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Preference number: 1 (lower is better) Translates to: STSWQAEHKSSWITQ*QQYTVSGMLDYKFS Trigger: ACTAAACTTGTAATCCAGCATCCCTGAAACAGTGTACTGTTGCCACTGGGTGATCCAGGAGGACTTGTGCTCCGCCTGCCAGCTAGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR GCA 90 bp | TTCCAGCTGTGCCATTGGAGACACCTGTGTGTGGCTGTGACTACCTaGATGGCCATATATCCACATGTATGTGAGAGCCAATGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: FQLCHWRHLCVAVTT*MAIYPHVCESQCVC Trigger: ACACACACATTGGCTCTCACATACATGTGGATATATGGCCATGCAGGTAGTCACAGCCACACACAGGTGTCTCCAATGGCACAGCTGGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR CCA 90 bp | CTCTTGGTTGGCAAAGCTTGCACCAAGAAGGATGGAGAGGAGAGATaGAGACAGAGAGAGAGAGAGAGAGAGAGAGCGCAAAGATCTCTA | + |
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Preference number: 1 (lower is better) Translates to: LLVGKACTKKDGEER*RQRERERERAQRSL Trigger: TAGAGATCTTTGCGCTCTCTCTCTCTCTCTCTCTCTCTGTCTCCATCTCTCCTCTCCATCCTTCTTGGTGCAAGCTTTGCCAACCAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCACAACTACTTCCTGCTTCCGCCTCAAACTGCTCCGTGGGCAGGCTTGCCCACAAGAGCCCAGGTGTaGAAGGAGCCCAGGAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: AHNYFLLPPQTAPWAGLPTRAQV*KEPRRR Trigger: CCGCCTCCTGGGCTCCTTGCACACCTGGGCTCTTGT...GGGCAAGCCTGCCCACGGAGCAGTTTGAGGCGGAAGCAGGAAGTAGTTGTGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR CAA 90 bp | TCCTGCTTCCGCCTCAAACTGCTCCGTGGGCAGGCTTGCCCTGCCTaGCTTTCACCCACCGACGTCCTCTGTGCTGAGAAGTTCCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SCFRLKLLRGQACPA*LSPTDVLCAEKFLP Trigger: GGGAAGGAACTTCTCAGCACAGAGGACGTCGGTGGGTGAAAGCAAGGCAGGGCAAGCCTGCCCACGGAGCAGTTTGAGGCGGAAGCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCCGCAAGTCACGTGCAGGCCTTCCTTTCCTTACAGAGAGTCATCGGCCGCCAGGCCAGTTAAAAAGTaGGAGGGAGCAGTGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: TPQVTCRPSFPYRESSAARPVKK*EGAVGR Trigger: CCTCCCCACTGCTCCCTCTCACTTTTTAACTGGCCT...GGCGGCCGATGACTCTCTGTAAGGAAAGGAAGGCCTGCACGTGACTTGCGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAGCTGCTAGAGTCAGGCGAGTCTGTTGTGTCCCACGCTGACCTAATTGCAGGCTTCAAGCCAGGCTaGGTCCCACAGGCCCACCTA | + |
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Preference number: 2 (lower is better) Translates to: GQLLESGESVVSHADLIAGFKPG*VPQAHL Trigger: TAGGTGGGCCTGTGGGACCCAGCCTGGCTTGAAGCC...TGCAATTAGGTCAGCGTGGGACACAACAGACTCGCCTGACTCTAGCAGCTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | CAACTACTTCCTGCTTCCGCCTCAAACTGCTCCGTGGGCAGGCTTGCCCTGCCTTTCCAGCTGTGCCATTaGAGACACCTGTGTGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: QLLPASASNCSVGRLALPFQLCH*RHLCVA Trigger: AGCCACACACAGGTGTCTCCAATGGCACAGCTGGAA...AGGCAGGGCAAGCCTGCCCACGGAGCAGTTTGAGGCGGAAGCAGGAAGTAGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR CAA 90 bp | CCTAGAGGCCACTCCTTTAGGAGGTACCAGGAACGCTTTCTGGTGTaGTTAGGGCTGCTGGGGGCAGGAAGCCAAGCACGTGAAGTACTG | + |
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Preference number: 2 (lower is better) Translates to: PRGHSFRRYQERFLV*LGLLGAGSQAREVL Trigger: CAGTACTTCACGTGCTTGGCTTCCTGCCCCCAGCAGCCCTAACAACACCAGAAAGCGTTCCTGGTACCTCCTAAAGGAGTGGCCTCTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTCCTTCCCTAGCTACTGAGGGAGACATTGCTGTGCCCTCAAATAAAAACCCCAGGAGGCGGCCGTaGGCTTCAAGCCAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EVPSLATEGDIAVPSNKNPRRRP*ASSQAG Trigger: CCCAGCCTGGCTTGAAGCCCACGGCCGCCTCCTGGG...GTTTTTATTTGAGGGCACAGCAATGTCTCCCTCAGTAGCTAGGGAAGGAACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTGTGTGGCTGTGACTACGGCTTCAAGCCAGGCTaGGTCCCACAGGCCCACCTA | + |
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Preference number: 2 (lower is better) Translates to: LKTIPAVPLETPVCGCDYGFKPG*VPQAHL Trigger: TAGGTGGGCCTGTGGGACCCAGCCTGGCTTGAAGCC...GTAGTCACAGCCACACACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATATATCCACATGTATGTGAGAGCCAATGTGTGTGTTATCGTGTGCATGTGCCCAGGAGGCGGCCGTaGGCTTCAAGCCAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: AIYPHVCESQCVCYRVHVPRRRP*ASSQAG Trigger: CCCAGCCTGGCTTGAAGCCCACGGCCGCCTCCTGGG...CACATGCACACGATAACACACACATTGGCTCTCACATACATGTGGATATATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | TACAGAACCCCTTTGTCACTGGTCTTCACAGTGATGAGAGAGAGACACCTGCCCCCTCAAACTGCTCCGTaGGCAGGCTTGCCCTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: YRTPLSLVFTVMRERHLPPQTAP*AGLPCL Trigger: AAGGCAGGGCAAGCCTGCCCACGGAGCAGTTTGAGG...GGGCAGGTGTCTCTCTCTCATCACTGTGAAGACCAGTGACAAAGGGGTTCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCCGCAAGTCACGTGCAGGCCTTCCTTTCCTTACAGAGAGTCATCGGCCGCCTTGCACCAAGAAGGATaGAGAGGAGAGATGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: TPQVTCRPSFPYRESSAALHQEG*RGEMET Trigger: TGTCTCCATCTCTCCTCTCCATCCTTCTTGGTGCAA...GGCGGCCGATGACTCTCTGTAAGGAAAGGAAGGCCTGCACGTGACTTGCGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | TACAGAACCCCTTTGTCACTGGTCTTCACAGTGATGAGAGAGAGACACCTGCCCAGAGTCCCCAGGAAGTaGAATGCCACCTGGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: YRTPLSLVFTVMRERHLPRVPRK*NATWGR Trigger: TCTGCCCCAGGTGGCATTCCACTTCCTGGGGACTCT...GGGCAGGTGTCTCTCTCTCATCACTGTGAAGACCAGTGACAAAGGGGTTCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCCTGTCCCCACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTTCACCCCACCCTCGGTaGCCACAGGCTTGCAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: DSCPHLDPTSENNSSCAISPHPR*PQACRV Trigger: GACTCTGCAAGCCTGTGGCCACCGAGGGTGGGGTGA...AATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTGGGGACAGGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGGGTTGCCTGTGCATAGCCATGGGAGTGGAGTGTGTGTAAGTGTCTGGGATGAGCACAAGTCCTCCTaGATCACCCAGTGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: MGLPVHSHGSGVCVSVWDEHKSS*ITQWQQ Trigger: CTGTTGCCACTGGGTGATCCAGGAGGACTTGTGCTC...ATCCCAGACACTTACACACACTCCACTCCCATGGCTATGCACAGGCAACCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGTTCCTTCCCTAGCTACTGAGGGAGACATTGCTGTGCCCTCAAATAAAAACCGGTGGCCACAGGCTTaGAGAGTCCCCAGGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: EVPSLATEGDIAVPSNKNRWPQA*RVPRKW Trigger: CCACTTCCTGGGGACTCTGCAAGCCTGTGGCCACCG...GTTTTTATTTGAGGGCACAGCAATGTCTCCCTCAGTAGCTAGGGAAGGAACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTCGGTGGCCACAGGCTTaGAGAGTCCCCAGGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: HLDPTSENNSSCAIGDTCRWPQA*RVPRKW Trigger: CCACTTCCTGGGGACTCTGCAAGCCTGTGGCCACCG...ACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCACAGTGATGAGAGAGAGACACCTGCCCTGGCCCACAACTACTTCCTGCGTGTGTGTTATCGTGTaGATGTGTGCGTGGCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: VFTVMRERHLPWPTTTSCVCVIV*MCAWLC Trigger: ACACAGCCACGCACACATGCACACGATAACACACAC...GCAGGAAGTAGTTGTGGGCCAGGGCAGGTGTCTCTCTCTCATCACTGTGAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTGTGTGGCTGTGACTACGCATGCATGCACGCATaGCAGCTAGTGGAATGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LKTIPAVPLETPVCGCDYACMHA*QLVEWG Trigger: ACCCCATTCCACTAGCTGTCATGCGTGCATGCATGC...GTAGTCACAGCCACACACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR GCA 90 bp | CTATTTACAGCTTACAGAACCCCTTTGTCACTGGTCTTCACAGTGATGAGAGAGACAAGAGCCCAGGTGTaGAAGGAGCCCAGGAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: LFTAYRTPLSLVFTVMRETRAQV*KEPRRR Trigger: CCGCCTCCTGGGCTCCTTGCACACCTGGGCTCTTGT...CTCTCTCATCACTGTGAAGACCAGTGACAAAGGGGTTCTGTAAGCTGTAAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | CTATTTACAGCTTACAGAACCCCTTTGTCACTGGTCTTCACAGTGATGAGAGAGTCACCCCACCCTCGGTaGCCACAGGCTTGCAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: LFTAYRTPLSLVFTVMRESPHPR*PQACRV Trigger: GACTCTGCAAGCCTGTGGCCACCGAGGGTGGGGTGA...CTCTCTCATCACTGTGAAGACCAGTGACAAAGGGGTTCTGTAAGCTGTAAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTGTGTGGCTGTGACTACAGTCCTGTCCCTTGCTaGCCTACCTGGTTCACAAGA | + |
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Preference number: 2 (lower is better) Translates to: LKTIPAVPLETPVCGCDYSPVPC*PTWFTR Trigger: TCTTGTGAACCAGGTAGGCCAGCAAGGGACAGGACT...GTAGTCACAGCCACACACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTCCTTCCCTAGCTACTGAGGGAGACATTGCTGTGCCCTCAAATAAAAACAAGTGGAATGCCACCTaGGGCAGAGGACCTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: EVPSLATEGDIAVPSNKNKWNAT*GRGPLG Trigger: ACCCAGAGGTCCTCTGCCCCAGGTGGCATTCCACTT...GTTTTTATTTGAGGGCACAGCAATGTCTCCCTCAGTAGCTAGGGAAGGAACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGTTCCTTCCCTAGCTACTGAGGGAGACATTGCTGTGCCCTCAAATAAAAACACAGGAGGTGGGTGGTaGGGCGTTAGAAAAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: EVPSLATEGDIAVPSNKNTGGGW*GVRKAC Trigger: ACAGGCTTTTCTAACGCCTCACCACCCACCTCCTGT...GTTTTTATTTGAGGGCACAGCAATGTCTCCCTCAGTAGCTAGGGAAGGAACTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTACAGGAGGTGGGTGGTaGGGCGTTAGAAAAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: HLDPTSENNSSCAIGDTCTGGGW*GVRKAC Trigger: ACAGGCTTTTCTAACGCCTCACCACCCACCTCCTGT...ACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTTCACAGTGATGAGAGAGAGACACCTGCCCTGGCCCACAACTACTTCCTGCCCCTCAAATAAAAACTaGAATCCCAGCAGACGACAA | + |
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Preference number: 2 (lower is better) Translates to: VFTVMRERHLPWPTTTSCPSNKN*NPSRRQ Trigger: TTGTCGTCTGCTGGGATTGCAGTTTTTATTTGAGGG...GCAGGAAGTAGTTGTGGGCCAGGGCAGGTGTCTCTCTCTCATCACTGTGAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR TCA 90 bp | GCCATATATCCACATGTATGTGAGAGCCAATGTGTGTGTTATCGTGTGCATGTGGCATGCATGCACGCATaGCAGCTAGTGGAATGGGGT | + |
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Preference number: 2 (lower is better) Translates to: AIYPHVCESQCVCYRVHVACMHA*QLVEWG Trigger: ACCCCATTCCACTAGCTGTCATGCGTGCATGCATGC...CACATGCACACGATAACACACACATTGGCTCTCACATACATGTGGATATATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCCTGTCCCCACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTTGTAAGTGTCTGGGATaGCTGAGTACTAGCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: DSCPHLDPTSENNSSCAICKCLG*LSTSWQ Trigger: CTGCCAGCTAGTACTCAGCCATCCCAGACACTTACA...AATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTGGGGACAGGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTTATCGTGTGCATGTGTaGGTGGCTGTGTATGTAGGC | + |
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Preference number: 2 (lower is better) Translates to: HLDPTSENNSSCAIGDTCYRVHV*VAVYVG Trigger: GCCTACATACACAGCCACGCACACATGCACACGATA...ACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR-3UTR CCA 90 bp | GGATGCTGGATTACAAGTTTAGTTAACCAGTTTCCAATACCTAACATCTTTCTGAAGTGGAATGCCACCTaGGGCAGAGGACCTCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: GCWITSLVNQFPIPNIFLKWNAT*GRGPLG Trigger: ACCCAGAGGTCCTCTGCCCCAGGTGGCATTCCACTT...CAGAAAGATGTTAGGTATTGGAAACTGGTTAACTAAACTTGTAATCCAGCATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR CAA 90 bp | TACAGGCAACCTTATCTGATTAGAACAAACACTTCCTTCTTATCCTaGGGGTTAAATCCACTCAGGCACAGAAGAAATACAAAAGAATCA | + |
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Preference number: 2 (lower is better) Translates to: YRQPYLIRTNTSFLS*GLNPLRHRRNTKES Trigger: TGATTCTTTTGTATTTCTTCTGTGCCTGAGTGGATTTAACCCCAAGGATAAGAAGGAAGTGTTTGTTCTAATCAGATAAGGTTGCCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR CCA 72 bp | AGAGCCCAGGTGTGCAAGGAGCCCAGGAGGCGGCCGTaGGCTTCAAGCCAGGCTGGGTCCCACAGGCCCACC | + |
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Preference number: 3 (lower is better) Translates to: RAQVCKEPRRRP*ASSQAGSHRPT Trigger: GGTGGGCCTGTGGGACCCAGCCTGGCTTGAAGCCCACGGCCGCCTCCTGGGCTCCTTGCACACCTGGGCTCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR GCA 72 bp | CCTTGCTGGCCTACCTGGTTCACAAGAGCCCAGGTGTaGAAGGAGCCCAGGAGGCGGCCGTGGGCTTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: PCWPTWFTRAQV*KEPRRRPWASS Trigger: GCTTGAAGCCCACGGCCGCCTCCTGGGCTCCTTGCACACCTGGGCTCTTGTGAACCAGGTAGGCCAGCAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR GCA 72 bp | AAAGCCGTGCTGTGCCAGGCTGGAGGGCAGAGGCAGTaGCCTCACCACCCAACTTGCCTAGAGGAACAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KAVLCQAGGQRQ*PHHPTCLEEQP Trigger: GGGCTGTTCCTCTAGGCAAGTTGGGTGGTGAGGGCACTGCCTCTGCCCTCCAGCCTGGCACAGCACGGCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR GCA 72 bp | GCCTCAAACTGCTCCGTGGGCAGGCTTGCCCTGCCTTaGTTTCACCCACCGACGTCCTCTGTGCTGAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ASNCSVGRLALP*FHPPTSSVLRS Trigger: ACTTCTCAGCACAGAGGACGTCGGTGGGTGAAAGCAAGGCAGGGCAAGCCTGCCCACGGAGCAGTTTGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR GCA 72 bp | CCTGGCCCACAACTACTTCCTGCTTCCGCCTCAAACTaGTCCGTGGGCAGGCTTGCCCTGCCTTGCTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGPQLLPASASN*SVGRLALPCFH Trigger: GTGAAAGCAAGGCAGGGCAAGCCTGCCCACGGAGCAGTTTGAGGCGGAAGCAGGAAGTAGTTGTGGGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR GCA 72 bp | AGAGAGAGACACCTGCCCTGGCCCACAACTACTTCCTaGTTCCGCCTCAAACTGCTCCGTGGGCAGGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RERHLPWPTTTS*FRLKLLRGQAC Trigger: GCAAGCCTGCCCACGGAGCAGTTTGAGGCGGAAGCAGGAAGTAGTTGTGGGCCAGGGCAGGTGTCTCTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR TCA 72 bp | CAGACAGGGATGGACAGGGTGGTCCGCAGACCTCCATaGTGGCCAAAGGGGAAGGAAGATCTCCCTAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QTGMDRVVRRPP*WPKGKEDLPRG Trigger: GCCTCTAGGGAGATCTTCCTTCCCCTTTGGCCATCATGGAGGTCTGCGGACCACCCTGTCCATCCCTGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR GCA 72 bp | CACCTGGGGAAGGTACCAGGCAATAGTCCTGTCCCTTaGTGGCCTACCTGGTTCACAAGAGCCCAGGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HLGKVPGNSPVP*WPTWFTRAQVC Trigger: GCACACCTGGGCTCTTGTGAACCAGGTAGGCCAGCAAGGGACAGGACTATTGCCTGGTACCTTCCCCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CCA 72 bp | GTACCAGGCAATAGTCCTGTCCCTTGCTGGCCTACCTaGTTCACAAGAGCCCAGGTGTGCAAGGAGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VPGNSPVPCWPT*FTRAQVCKEPR Trigger: CCTGGGCTCCTTGCACACCTGGGCTCTTGTGAACCAGGTAGGCCAGCAAGGGACAGGACTATTGCCTGGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CCA 72 bp | CACAACTACTTCCTGCTTCCGCCTCAAACTGCTCCGTaGGCAGGCTTGCCCTGCCTTGCTTTCACCCACCGA | + |
|
Preference number: 3 (lower is better) Translates to: HNYFLLPPQTAP*AGLPCLAFTHR Trigger: TCGGTGGGTGAAAGCAAGGCAGGGCAAGCCTGCCCACGGAGCAGTTTGAGGCGGAAGCAGGAAGTAGTTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR TCA 72 bp | GTTGTTAGGGCTGCTGGGGGCAGGAAGCCAAGCACGTaGAGTACTGGCATTTGCGCTGAGTGCAGACGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VVRAAGGRKPST*STGICAECRRD Trigger: ATCCCGTCTGCACTCAGCGCAAATGCCAGTACTTCACGTGCTTGGCTTCCTGCCCCCAGCAGCCCTAACAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CCA 72 bp | CTGGGGAAGGTACCAGGCAATAGTCCTGTCCCTTGCTaGCCTACCTGGTTCACAAGAGCCCAGGTGTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGKVPGNSPVPC*PTWFTRAQVCK Trigger: CTTGCACACCTGGGCTCTTGTGAACCAGGTAGGCCAGCAAGGGACAGGACTATTGCCTGGTACCTTCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CCA 72 bp | GGGAAAACCAAAGCAGACAGACAGGGATGGACAGGGTaGTCCGCAGACCTCCATGATGGCCAAAGGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GKTKADRQGWTG*SADLHDGQRGR Trigger: CCTTCCCCTTTGGCCATCATGGAGGTCTGCGGACCACCCTGTCCATCCCTGTCTGTCTGCTTTGGTTTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR GCA 72 bp | AATGTCAGCAACGAGGTAGAGACCCCGCAAGTCACGTaGAGGCCTTCCTTTCCTTACAGAGAGTCATCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: NVSNEVETPQVT*RPSFPYRESSA Trigger: GGCCGATGACTCTCTGTAAGGAAAGGAAGGCCTGCACGTGACTTGCGGGGTCTCTACCTCGTTGCTGACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CCA 72 bp | TGGCAGGCGGAGCACAAGTCCTCCTGGATCACCCAGTaGCAACAGTACACTGTTTCAGGGATGCTGGATTAC | + |
|
Preference number: 3 (lower is better) Translates to: WQAEHKSSWITQ*QQYTVSGMLDY Trigger: GTAATCCAGCATCCCTGAAACAGTGTACTGTTGCCACTGGGTGATCCAGGAGGACTTGTGCTCCGCCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CCA 72 bp | CTGGTCTTCACAGTGATGAGAGAGAGACACCTGCCCTaGCCCACAACTACTTCCTGCTTCCGCCTCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: LVFTVMRERHLP*PTTTSCFRLKL Trigger: CAGTTTGAGGCGGAAGCAGGAAGTAGTTGTGGGCCAGGGCAGGTGTCTCTCTCTCATCACTGTGAAGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTCCTGTCCCCACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTTCGGTGGCCACAGGCTaGCAGAGTCCCCAGGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DSCPHLDPTSENNSSCAISVATG*QSPQEV Trigger: CACTTCCTGGGGACTCTGCAAGCCTGTGGCCACCGA...AATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTGGGGACAGGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CCA 72 bp | GGCAAAGCTTGCACCAAGAAGGATGGAGAGGAGAGATaGAGACAGAGAGAGAGAGAGAGAGAGAGAGCGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GKACTKKDGEER*RQRERERERAQ Trigger: TTGCGCTCTCTCTCTCTCTCTCTCTCTCTGTCTCCATCTCTCCTCTCCATCCTTCTTGGTGCAAGCTTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CCA 72 bp | AGAAAAGCCTGTGGGTCACTCATGAATAAGCACACCTaGGGAAGGTACCAGGCAATAGTCCTGTCCCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RKACGSLMNKHT*GRYQAIVLSLA Trigger: AGCAAGGGACAGGACTATTGCCTGGTACCTTCCCCAGGTGTGCTTATTCATGAGTGACCCACAGGCTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CCA 72 bp | GTGTCTAATGTAGCTCCCTCTGTAAGGCCTCTTGGTTaGCAAAGCTTGCACCAAGAAGGATGGAGAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VSNVAPSVRPLG*QSLHQEGWRGE Trigger: CTCTCCTCTCCATCCTTCTTGGTGCAAGCTTTGCCAACCAAGAGGCCTTACAGAGGGAGCTACATTAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR GCA 72 bp | TGCCATTGGAGACACCTGTGTGTGGCTGTGACTACCTaGATGGCCATATATCCACATGTATGTGAGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CHWRHLCVAVTT*MAIYPHVCESQ Trigger: TTGGCTCTCACATACATGTGGATATATGGCCATGCAGGTAGTCACAGCCACACACAGGTGTCTCCAATGGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | GCCCACAACTACTTCCTGCTTCCGCCTCAAACTGCTCCGTGGGCAGGCTTGCCCGCACTGGGCGCAGGCTaGAGGGGCACGGGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHNYFLLPPQTAPWAGLPALGAG*RGTGWA Trigger: TGCCCAGCCCGTGCCCCTCCAGCCTGCGCCCAGTGC...GGGCAAGCCTGCCCACGGAGCAGTTTGAGGCGGAAGCAGGAAGTAGTTGTGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | CAACTACTTCCTGCTTCCGCCTCAAACTGCTCCGTGGGCAGGCTTGCCCTGCCTACGGGCTGGGCAGAGTaGCCTGCAGACCTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLLPASASNCSVGRLALPTGWAE*PADLLA Trigger: TGCCAGGAGGTCTGCAGGCCACTCTGCCCAGCCCGT...AGGCAGGGCAAGCCTGCCCACGGAGCAGTTTGAGGCGGAAGCAGGAAGTAGTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CAA 72 bp | CAACAGAAGATCACCCCACCCTCGGTGGCCACAGGCTaGCAGAGTCCCCAGGAAGTGGAATGCCACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQKITPPSVATG*QSPQEVECHLG Trigger: CCCCAGGTGGCATTCCACTTCCTGGGGACTCTGCAAGCCTGTGGCCACCGAGGGTGGGGTGATCTTCTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CAA 72 bp | CGCCTCAAACTGCTCCGTGGGCAGGCTTGCCCTGCCTaGCTTTCACCCACCGACGTCCTCTGTGCTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLKLLRGQACPA*LSPTDVLCAEK Trigger: CTTCTCAGCACAGAGGACGTCGGTGGGTGAAAGCAAGGCAGGGCAAGCCTGCCCACGGAGCAGTTTGAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTCACAGTGATGAGAGAGAGACACCTGCCCTGGCCCACAACTACTTCCTGCTGGAGGGGCACGGGCTaGGCAGAGTGGCCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFTVMRERHLPWPTTTSCWRGTG*AEWPAD Trigger: GTCTGCAGGCCACTCTGCCCAGCCCGTGCCCCTCCA...GCAGGAAGTAGTTGTGGGCCAGGGCAGGTGTCTCTCTCTCATCACTGTGAAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGGTTGCCTGTGCATAGCCATGGGAGTGGAGTGTGTGTAAGTGTCTGGGATGTGTGGGGAAGGGCCTaGGGGGTCGCGCCAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: MGLPVHSHGSGVCVSVWDVWGRA*GVAPAT Trigger: AGTTGCTGGCGCGACCCCGCAGGCCCTTCCCCACAC...ATCCCAGACACTTACACACACTCCACTCCCATGGCTATGCACAGGCAACCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGGTTGCCTGTGCATAGCCATGGGAGTGGAGTGTGTGTAAGTGTCTGGGATGGGGCCTCTTCAAGGTaGCGGAGGGCCAGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MGLPVHSHGSGVCVSVWDGASSR*RRARSW Trigger: CCAGCTCCTGGCCCTCCGCCACCTTGAAGAGGCCCC...ATCCCAGACACTTACACACACTCCACTCCCATGGCTATGCACAGGCAACCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | ACCCCGCAAGTCACGTGCAGGCCTTCCTTTCCTTACAGAGAGTCATCGGCCGCCAACTGCTTCTCCAGGTaGCGCCTCTGGATGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPQVTCRPSFPYRESSAANCFSR*RLWMTR Trigger: CCTGGTCATCCAGAGGCGCCACCTGGAGAAGCAGTT...GGCGGCCGATGACTCTCTGTAAGGAAAGGAAGGCCTGCACGTGACTTGCGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | TACAGAACCCCTTTGTCACTGGTCTTCACAGTGATGAGAGAGAGACACCTGCCCCGTTGGGGACACTGGTaGGGCCACCCCTCCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YRTPLSLVFTVMRERHLPRWGHW*GHPSAG Trigger: CCCTGCGGAGGGGTGGCCCCACCAGTGTCCCCAACG...GGGCAGGTGTCTCTCTCTCATCACTGTGAAGACCAGTGACAAAGGGGTTCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR TCA 90 bp | GACTCCTGTCCCCACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTGGGGAGGGCGGCTGCTaGCAGCCACAGCCAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: DSCPHLDPTSENNSSCAIGEGGC*QPQPEA Trigger: CGCCTCTGGCTGTGGCTGTCAGCAGCCGCCCTCCCC...AATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTGGGGACAGGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTGTGTGGCTGTGACTACGGCGGTGGATCCCGCTaGGATGTGGCTGCAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LKTIPAVPLETPVCGCDYGGGSR*DVAAGD Trigger: GTCGCCTGCAGCCACATCCCAGCGGGATCCACCGCC...GTAGTCACAGCCACACACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CAA 72 bp | CACTCCTTTAGGAGGTACCAGGAACGCTTTCTGGTGTaGTTAGGGCTGCTGGGGGCAGGAAGCCAAGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: HSFRRYQERFLV*LGLLGAGSQAR Trigger: ACGTGCTTGGCTTCCTGCCCCCAGCAGCCCTAACAACACCAGAAAGCGTTCCTGGTACCTCCTAAAGGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR GCA 90 bp | GACTCCTGTCCCCACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTGCCACTCGGTGCACTTaGGCACGAGGCCCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSCPHLDPTSENNSSCAIATRCT*ARGPRP Trigger: TGGACGAGGGCCTCGTGCGCAAGTGCACCGAGTGGC...AATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTGGGGACAGGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTGGGGCCTCTTCAAGGTaGCGGAGGGCCAGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLDPTSENNSSCAIGDTCGASSR*RRARSW Trigger: CCAGCTCCTGGCCCTCCGCCACCTTGAAGAGGCCCC...ACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | CACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTGGCGGTGGATCCCGCTaGGATGTGGCTGCAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLDPTSENNSSCAIGDTCGGGSR*DVAAGD Trigger: GTCGCCTGCAGCCACATCCCAGCGGGATCCACCGCC...ACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | CTATTTACAGCTTACAGAACCCCTTTGTCACTGGTCTTCACAGTGATGAGAGAGCGTTGGGGACACTGGTaGGGCCACCCCTCCGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTAYRTPLSLVFTVMRERWGHW*GHPSAG Trigger: CCCTGCGGAGGGGTGGCCCCACCAGTGTCCCCAACG...CTCTCTCATCACTGTGAAGACCAGTGACAAAGGGGTTCTGTAAGCTGTAAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR GCA 90 bp | GCCATATATCCACATGTATGTGAGAGCCAATGTGTGTGTTATCGTGTGCATGTGGTGTGGGGAAGGGCCTaGGGGGTCGCGCCAGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: AIYPHVCESQCVCYRVHVVWGRA*GVAPAT Trigger: AGTTGCTGGCGCGACCCCGCAGGCCCTTCCCCACAC...CACATGCACACGATAACACACACATTGGCTCTCACATACATGTGGATATATGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR GCA 90 bp | CACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTGCCACTCGGTGCACTTaGGCACGAGGCCCTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLDPTSENNSSCAIGDTCATRCT*ARGPRP Trigger: TGGACGAGGGCCTCGTGCGCAAGTGCACCGAGTGGC...ACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTTCCTTCCCTAGCTACTGAGGGAGACATTGCTGTGCCCTCAAATAAAAACCACGCAGCCACTCGGTaGACTTGCGCACGAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EVPSLATEGDIAVPSNKNHAATR*TCARGP Trigger: AGGGCCTCGTGCGCAAGTGCACCGAGTGGCTGCGTG...GTTTTTATTTGAGGGCACAGCAATGTCTCCCTCAGTAGCTAGGGAAGGAACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTTCCTTCCCTAGCTACTGAGGGAGACATTGCTGTGCCCTCAAATAAAAACACGGGCTGGGCAGAGTaGCCTGCAGACCTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVPSLATEGDIAVPSNKNTGWAE*PADLLA Trigger: TGCCAGGAGGTCTGCAGGCCACTCTGCCCAGCCCGT...GTTTTTATTTGAGGGCACAGCAATGTCTCCCTCAGTAGCTAGGGAAGGAACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | CTATTTACAGCTTACAGAACCCCTTTGTCACTGGTCTTCACAGTGATGAGAGAGTGGAGGGGCACGGGCTaGGCAGAGTGGCCTGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LFTAYRTPLSLVFTVMREWRGTG*AEWPAD Trigger: GTCTGCAGGCCACTCTGCCCAGCCCGTGCCCCTCCA...CTCTCTCATCACTGTGAAGACCAGTGACAAAGGGGTTCTGTAAGCTGTAAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CAA 72 bp | TCCCAGCAGACGACAACCCTGACTCCTGTCCCCACCTaGATCCAACTTCTGAAAACAATTCCAGCTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQQTTTLTPVPT*IQLLKTIPAVP Trigger: TGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTGGGGACAGGAGTCAGGGTTGTCGTCTGCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| 3UTR CAA 72 bp | GTAGCTCCCTCTGTAAGGCCTCTTGGTTGGCAAAGCTaGCACCAAGAAGGATGGAGAGGAGAGATGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VAPSVRPLGWQS*HQEGWRGEMET Trigger: TGTCTCCATCTCTCCTCTCCATCCTTCTTGGTGCAAGCTTTGCCAACCAAGAGGCCTTACAGAGGGAGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR TCA 90 bp | GAAGTTCCTTCCCTAGCTACTGAGGGAGACATTGCTGTGCCCTCAAATAAAAACGGATGGCTTCTGGGGTaGGGTTCAAGGAGAAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EVPSLATEGDIAVPSNKNGWLLG*GSRRSA Trigger: CGCGCTTCTCCTTGAACCTCACCCCAGAAGCCATCC...GTTTTTATTTGAGGGCACAGCAATGTCTCCCTCAGTAGCTAGGGAAGGAACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR TCA 90 bp | GGATGCTGGATTACAAGTTTAGTTAACCAGTTTCCAATACCTAACATCTTTCTGGGGGAGGGCGGCTGCTaGCAGCCACAGCCAGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GCWITSLVNQFPIPNIFLGEGGC*QPQPEA Trigger: CGCCTCTGGCTGTGGCTGTCAGCAGCCGCCCTCCCC...CAGAAAGATGTTAGGTATTGGAAACTGGTTAACTAAACTTGTAATCCAGCATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | GGATGCTGGATTACAAGTTTAGTTAACCAGTTTCCAATACCTAACATCTTTCTGGCACTGGGCGCAGGCTaGAGGGGCACGGGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCWITSLVNQFPIPNIFLALGAG*RGTGWA Trigger: TGCCCAGCCCGTGCCCCTCCAGCCTGCGCCCAGTGC...CAGAAAGATGTTAGGTATTGGAAACTGGTTAACTAAACTTGTAATCCAGCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR TCA 90 bp | GCCATATATCCACATGTATGTGAGAGCCAATGTGTGTGTTATCGTGTGCATGTGGGATGGCTTCTGGGGTaGGGTTCAAGGAGAAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: AIYPHVCESQCVCYRVHVGWLLG*GSRRSA Trigger: CGCGCTTCTCCTTGAACCTCACCCCAGAAGCCATCC...CACATGCACACGATAACACACACATTGGCTCTCACATACATGTGGATATATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
||
| CDS-3UTR CCA 90 bp | CTATTTACAGCTTACAGAACCCCTTTGTCACTGGTCTTCACAGTGATGAGAGAGAACTGCTTCTCCAGGTaGCGCCTCTGGATGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LFTAYRTPLSLVFTVMRENCFSR*RLWMTR Trigger: CCTGGTCATCCAGAGGCGCCACCTGGAGAAGCAGTT...CTCTCTCATCACTGTGAAGACCAGTGACAAAGGGGTTCTGTAAGCTGTAAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| 3UTR CAA 72 bp | TTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATaGGAGACACCTGTGTGTGGCTGTGACTACCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LIQLLKTIPAVP*ETPVCGCDYLH Trigger: ATGCAGGTAGTCACAGCCACACACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS-3UTR CCA 90 bp | GGATGCTGGATTACAAGTTTAGTTAACCAGTTTCCAATACCTAACATCTTTCTGTCCAGGTGGCGCCTCTaGATGACCAGGATGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GCWITSLVNQFPIPNIFLSRWRL*MTRMAS Trigger: AGAAGCCATCCTGGTCATCCAGAGGCGCCACCTGGA...CAGAAAGATGTTAGGTATTGGAAACTGGTTAACTAAACTTGTAATCCAGCATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS GCA 90 bp | AGCACTGGGCGCAGGCTGGAGGGGCACGGGCTGGGCAGAGTGGCCTaGAGACCTCCTGGCAGCAGCGAGGCACGGGGAGGGCGGCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: STGRRLEGHGLGRVA*RPPGSSEARGGRLL Trigger: CAGCAGCCGCCCTCCCCGTGCCTCGCTGCTGCCAGGAGGTCTGCAGGCCACTCTGCCCAGCCCGTGCCCCTCCAGCCTGCGCCCAGTGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS CCA 90 bp | ATCATCGTACTTGTGCTTCTCATTGAGCAGCGACACCTTAAGCACTaGGCGCAGGCTGGAGGGGCACGGGCTGGGCAGAGTGGCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: IIVLVLLIEQRHLKH*AQAGGARAGQSGLQ Trigger: CTGCAGGCCACTCTGCCCAGCCCGTGCCCCTCCAGCCTGCGCCCAGTGCTTAAGGTGTCGCTGCTCAATGAGAAGCACAAGTACGATGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS-3UTR CAA 90 bp | CAACTTCTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTGTGTGGCTGTACAGCCAGAGGCGCGTaGGGGACACTGGTGGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: QLLKTIPAVPLETPVCGCTARGA*GTLVGP Trigger: TGGCCCCACCAGTGTCCCCAACGCGCCTCTGGCTGT...ACAGCCACACACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAGAAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS-3UTR CAA 90 bp | GACTCCTGTCCCCACCTTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTAGCCACTCGGTGCACTaGCGCACGAGGCCCTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: DSCPHLDPTSENNSSCAISHSVH*RTRPSS Trigger: GGACGAGGGCCTCGTGCGCAAGTGCACCGAGTGGCT...AATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAAGGTGGGGACAGGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS-3UTR CAA 90 bp | GAAGTTCCTTCCCTAGCTACTGAGGGAGACATTGCTGTGCCCTCAAATAAAAACAGCCACTCGGTGCACTaGCGCACGAGGCCCTCGTCC | + |
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Preference number: 5 (lower is better) Translates to: EVPSLATEGDIAVPSNKNSHSVH*RTRPSS Trigger: GGACGAGGGCCTCGTGCGCAAGTGCACCGAGTGGCT...GTTTTTATTTGAGGGCACAGCAATGTCTCCCTCAGTAGCTAGGGAAGGAACTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS-3UTR CAA 90 bp | TTGATCCAACTTCTGAAAACAATTCCAGCTGTGCCATTGGAGACACCTGTGTGTACAGCCAGAGGCGCGTaGGGGACACTGGTGGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LIQLLKTIPAVPLETPVCTARGA*GTLVGP Trigger: TGGCCCCACCAGTGTCCCCAACGCGCCTCTGGCTGT...ACACACAGGTGTCTCCAATGGCACAGCTGGAATTGTTTTCAGAAGTTGGATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS-3UTR CAA 90 bp | ATGGGGTTGCCTGTGCATAGCCATGGGAGTGGAGTGTGTGTAAGTGTCTGGGATTACTTGTGCTTCTCATaGAGCAGCGACACCTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: MGLPVHSHGSGVCVSVWDYLCFS*SSDTLS Trigger: GCTTAAGGTGTCGCTGCTCAATGAGAAGCACAAGTA...ATCCCAGACACTTACACACACTCCACTCCCATGGCTATGCACAGGCAACCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS CCA 72 bp | GGGGCACGGGCTGGGCAGAGTGGCCTGCAGACCTCCTaGCAGCAGCGAGGCACGGGGAGGGCGGCTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: GARAGQSGLQTS*QQRGTGRAAAD Trigger: GTCAGCAGCCGCCCTCCCCGTGCCTCGCTGCTGCCAGGAGGTCTGCAGGCCACTCTGCCCAGCCCGTGCCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS TCA 72 bp | CTCCTGGCAGCAGCGAGGCACGGGGAGGGCGGCTGCTaGCAGCCACAGCCAGAGGCGCGTTGGGGACACTGG | + |
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Preference number: 6 (lower is better) Translates to: LLAAARHGEGGC*QPQPEARWGHW Trigger: CCAGTGTCCCCAACGCGCCTCTGGCTGTGGCTGTCAGCAGCCGCCCTCCCCGTGCCTCGCTGCTGCCAGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS GCA 72 bp | GGGTGCTCAGGTGTGGCAGCGAGTCCAGATGCCCTGTaGGGCCCCTCGCAGCTGCCGCCGACTCGACCCCAC | + |
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Preference number: 6 (lower is better) Translates to: GCSGVAASPDAL*GPSQLPPTRPH Trigger: GTGGGGTCGAGTCGGCGGCAGCTGCGAGGGGCCGCACAGGGCATCTGGACTCGCTGCCACACCTGAGCACCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS CCA 72 bp | CAGGGTCGAAGCCCTGGTCCGGGGACAGGGTACCAGTaGGAGCCGCGGGTCGGCAGAGGGTGTGGGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: QGRSPGPGTGYQ*EPRVGRGCGEG Trigger: CCCTTCCCCACACCCTCTGCCGACCCGCGGCTCCCACTGGTACCCTGTCCCCGGACCAGGGCTTCGACCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS CAA 90 bp | TCCACCTCCTCCTCGTACTCCTCATCATCGTACTTGTGCTTCTCATaGAGCAGCGACACCTTAAGCACTGGGCGCAGGCTGGAGGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: STSSSYSSSSYLCFS*SSDTLSTGRRLEGH Trigger: GTGCCCCTCCAGCCTGCGCCCAGTGCTTAAGGTGTCGCTGCTCAATGAGAAGCACAAGTACGATGATGAGGAGTACGAGGAGGAGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS CAA 72 bp | TCCTCGTACTCCTCATCATCGTACTTGTGCTTCTCATaGAGCAGCGACACCTTAAGCACTGGGCGCAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSYSSSSYLCFS*SSDTLSTGRRL Trigger: CAGCCTGCGCCCAGTGCTTAAGGTGTCGCTGCTCAATGAGAAGCACAAGTACGATGATGAGGAGTACGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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| CDS CAA 72 bp | ACCTCCACCTCCTCCTCGTACTCCTCATCATCGTACTaGTGCTTCTCATTGAGCAGCGACACCTTAAGCACT | + |
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Preference number: 6 (lower is better) Translates to: TSTSSSYSSSSY*CFSLSSDTLST Trigger: AGTGCTTAAGGTGTCGCTGCTCAATGAGAAGCACAAGTACGATGATGAGGAGTACGAGGAGGAGGTGGAGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069742.8 ENSMUST00000163887.2 |
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