Pregenerated sensors for PRR16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073565Ensembl transcript IDs: ENSMUST00000116639.4, ENSMUST00000235541.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGGATGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTaGTCCATTATGGCTTTGAGGGCACACCTGCCACAGGTGTCTACC | + |
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Preference number: 1 (lower is better) Translates to: EGWNTVTFKQLAPML*SIMALRAHLPQVST Trigger: GGTAGACACCTGTGGCAGGTGTGCCCTCAAAGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCATCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR TCA 90 bp | TACCTGAAACTTCCGTCCTATAAATCTGTGTTCTTTCAGGGAATTTaGGCTTGCTCTGGTAAACTGAAGGCAAAAATTCCAACCTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: YLKLPSYKSVFFQGI*ACSGKLKAKIPTFQ Trigger: CTGGAAGGTTGGAATTTTTGCCTTCAGTTTACCAGAGCAAGCTCAAATTCCCTGAAAGAACACAGATTTATAGGACGGAAGTTTCAGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR CCA 90 bp | AATGTGATATCCAATCAGTATCACCTTATTCAAACTCTTGGGGACTaGCTTTCCATTTCAGTGAATGTTAACAGGGAGTTAAAAGTAATT | + |
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Preference number: 1 (lower is better) Translates to: NVISNQYHLIQTLGD*LSISVNVNRELKVI Trigger: AATTACTTTTAACTCCCTGTTAACATTCACTGAAATGGAAAGCCAGTCCCCAAGAGTTTGAATAAGGTGATACTGATTGGATATCACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR CAA 90 bp | GTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTTaGAGGGCACACCTGCCACAGGTGTCTACCTCTCTGCAAACAGGA | + |
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Preference number: 2 (lower is better) Translates to: VTFKQLAPMLWSIMA*RAHLPQVSTSLQTG Trigger: TCCTGTTTGCAGAGAGGTAGACACCTGTGGCAGGTGTGCCCTCAAAGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTACCTCCTGGCCCTCTCCCTaGAGGCACTTTACCTCACAC | + |
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Preference number: 2 (lower is better) Translates to: SQCTQYTNSHLELLSTVTSWPSP*RHFTSH Trigger: GTGTGAGGTAAAGTGCCTGCAGGGAGAGGGCCAGGA...GGTAACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR GCA 90 bp | ATACGAAGCGAAGGATGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCGGCTGTGGCATTTTCTaGCTCCGTGGCTCTGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: IRSEGWNTVTFKQLAPMLGCGIF*LRGSAH Trigger: ATGAGCAGAGCCACGGAGGCAGAAAATGCCACAGCC...GAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCATCCTTCGCTTCGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCACACCTGCCACAGGTGTCTACCTCTCTGCAAACAGGAACATTCTCTCTAGGGGGATCATTTCATTaGTCATTTGTGCTCCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: RAHLPQVSTSLQTGTFSLGGSFH*SFVLQG Trigger: CCCTTGGAGCACAAATGACCAATGAAATGATCCCCC...TAGAGAGAATGTTCCTGTTTGCAGAGAGGTAGACACCTGTGGCAGGTGTGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR-3UTR CCA 90 bp | ATACGAAGCGAAGGATGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCCATTTTCTGCCTCCGTaGCTCTGCTCATGGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: IRSEGWNTVTFKQLAPMLHFLPP*LCSWLS Trigger: TGACAGCCATGAGCAGAGCCACGGAGGCAGAAAATG...GAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCATCCTTCGCTTCGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR CAA 90 bp | CAACAAATACGAAGCGAAGGATGGAACACTGTAACTTTCAAGCAATaGGCGCCAATGCTCTGGTCCATTATGGCTTTGAGGGCACACCTG | + |
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Preference number: 2 (lower is better) Translates to: QQIRSEGWNTVTFKQ*APMLWSIMALRAHL Trigger: CAGGTGTGCCCTCAAAGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCATCCTTCGCTTCGTATTTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR-3UTR GCA 90 bp | ATACGAAGCGAAGGATGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCAGGTGTCTACCTCTCTaGAAACAGGAACATTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: IRSEGWNTVTFKQLAPMLRCLPL*KQEHSL Trigger: GAGAGAATGTTCCTGTTTGCAGAGAGGTAGACACCT...GAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCATCCTTCGCTTCGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTGGGCTTTTTATTGCTTaGGTAGAAAGTGCTCATTAC | + |
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Preference number: 2 (lower is better) Translates to: WNTVTFKQLAPMLWSIMAGLFIA*VESAHY Trigger: GTAATGAGCACTTTCTACTCAAGCAATAAAAAGCCC...AGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTACCCCTTATTCAAACTCTTaGGGACTGGCTTTCCATTTC | + |
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Preference number: 2 (lower is better) Translates to: SQCTQYTNSHLELLSTVTPYSNS*GLAFHF Trigger: GAAATGGAAAGCCAGTCCCCAAGAGTTTGAATAAGG...GGTAACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR GCA 90 bp | TCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTACCATGAATGGAATGAGTTaGCCTGGCTTTATCAACAAA | + |
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Preference number: 2 (lower is better) Translates to: SQCTQYTNSHLELLSTVTMNGMS*PGFINK Trigger: TTTGTTGATAAAGCCAGGGCAACTCATTCCATTCAT...GGTAACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR TCA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCACCTGAACATACCCTGTaGCTAGAGATACCTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: WIIKLTFPSCTTQKDKIAPEHTL*LEIPET Trigger: AGTTTCAGGTATCTCTAGTCACAGGGTATGTTCAGG...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR CCA 90 bp | TATGGGACATCAAAAATTCCTGACACCCTTCAACTTAGAAGAGAAAAAGGGAAACAAACTCTTGGGGACTaGCTTTCCATTTCAGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: YGTSKIPDTLQLRREKGKQTLGD*LSISVN Trigger: ATTCACTGAAATGGAAAGCCAGTCCCCAAGAGTTTG...TTTCCCTTTTTCTCTTCTAAGTTGAAGGGTGTCAGGAATTTTTGATGTCCCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGCTAAGTTTCTTAAGTTGGCAAACATTACTTAGGAGAAAGCCTTGGGTTGTCCTCAGCATTTCATaGTGCAAAACTATTGACAAA | + |
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Preference number: 2 (lower is better) Translates to: CWLSFLSWQTLLRRKPWVVLSIS*CKTIDK Trigger: TTTGTCAATAGTTTTGCATCATGAAATGCTGAGGAC...AACCCAAGGCTTTCTCCTAAGTAATGTTTGCCAACTTAAGAAACTTAGCCAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGCTAAGTTTCTTAAGTTGGCAAACATTACTTAGGAGAAAGCCTTGGGTTTTTACTCTACGAATGTaGTATCCAATCAGTATCACC | + |
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Preference number: 2 (lower is better) Translates to: CWLSFLSWQTLLRRKPWVFTLRM*YPISIT Trigger: GGTGATACTGATTGGATATCACATTCGTAGAGTAAA...AACCCAAGGCTTTCTCCTAAGTAATGTTTGCCAACTTAAGAAACTTAGCCAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR TCA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCATCCTGTGAGAAGGCATaGCAACATCAAAGACTTTCA | + |
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Preference number: 2 (lower is better) Translates to: WIIKLTFPSCTTQKDKIASCEKA*QHQRLS Trigger: TGAAAGTCTTTGATGTTGTCATGCCTTCTCACAGGA...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR TCA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCAGGGCTTTTTATTGCTTaGGTAGAAAGTGCTCATTAC | + |
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Preference number: 2 (lower is better) Translates to: WIIKLTFPSCTTQKDKIAGLFIA*VESAHY Trigger: GTAATGAGCACTTTCTACTCAAGCAATAAAAAGCCC...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGCTAAGTTTCTTAAGTTGGCAAACATTACTTAGGAGAAAGCCTTGGGTTATAGACCAAAATACTTaGAATCAGAAGGTCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: CWLSFLSWQTLLRRKPWVIDQNT*NQKVTV Trigger: AACTGTGACCTTCTGATTCCAAGTATTTTGGTCTAT...AACCCAAGGCTTTCTCCTAAGTAATGTTTGCCAACTTAAGAAACTTAGCCAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR CCA 90 bp | TATGGGACATCAAAAATTCCTGACACCCTTCAACTTAGAAGAGAAAAAGGGAAATGGAATGAGTTGCCCTaGCTTTATCAACAAATCAAA | + |
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Preference number: 2 (lower is better) Translates to: YGTSKIPDTLQLRREKGKWNELP*LYQQIK Trigger: TTTGATTTGTTGATAAAGCCAGGGCAACTCATTCCA...TTTCCCTTTTTCTCTTCTAAGTTGAAGGGTGTCAGGAATTTTTGATGTCCCATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR CAA 90 bp | GCCAATGCTCTGGTCCATTATGGCTTTGAGGGCACACCTGCCACAGGTGTCTACGAAGGGTTAGCTTCTTaGACAGGGTCAGGCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: ANALVHYGFEGTPATGVYEGLAS*TGSGSW Trigger: CCAGGAGCCTGACCCTGTCAAAGAAGCTAACCCTTC...GTAGACACCTGTGGCAGGTGTGCCCTCAAAGCCATAATGGACCAGAGCATTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR CCA 72 bp | AACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTaGTCCATTATGGCTTTGAGGGCACACCTGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: NTVTFKQLAPML*SIMALRAHLPQ Trigger: CTGTGGCAGGTGTGCCCTCAAAGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGCACACCTGCCACAGGTGTCTACCTCTCTGCAAACAGGAACATTCTCTCTATGGCCGGTTCAGTTTTaGGTTTTGCCTAAATGTTTT | + |
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Preference number: 3 (lower is better) Translates to: RAHLPQVSTSLQTGTFSLWPVQF*VLPKCF Trigger: AAAACATTTAGGCAAAACCAAAAACTGAACCGGCCA...TAGAGAGAATGTTCCTGTTTGCAGAGAGGTAGACACCTGTGGCAGGTGTGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR CCA 72 bp | GCCGACTTACTCTCTCAACAAATACGAAGCGAAGGATaGAACACTGTAACTTTCAAGCAATTGGCGCCAATG | + |
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Preference number: 3 (lower is better) Translates to: ADLLSQQIRSEG*NTVTFKQLAPM Trigger: CATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCATCCTTCGCTTCGTATTTGTTGAGAGAGTAAGTCGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGTCAGGCTCCTGGTTCCATTAAAATTAGATCTGCCCTCACGAGGTCAAGGATGGGCTTTTTATTGCTaGAGTAGAAAGTGCTCATTA | + |
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Preference number: 3 (lower is better) Translates to: RVRLLVPLKLDLPSRGQGWAFYC*SRKCSL Trigger: TAATGAGCACTTTCTACTCAAGCAATAAAAAGCCCA...TCCTTGACCTCGTGAGGGCAGATCTAATTTTAATGGAACCAGGAGCCTGACCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTACCACCTTATTCAAACTCTaGGGGACTGGCTTTCCATTT | + |
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Preference number: 3 (lower is better) Translates to: SQCTQYTNSHLELLSTVTTLFKL*GTGFPF Trigger: AAATGGAAAGCCAGTCCCCAAGAGTTTGAATAAGGT...GGTAACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR CAA 90 bp | TGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTAGGAGTAATTCTGACTaGAGATGCCAATTAGGACTT | + |
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Preference number: 3 (lower is better) Translates to: WNTVTFKQLAPMLWSIMARSNSD*RCQLGL Trigger: AAGTCCTAATTGGCATCTCAAGTCAGAATTACTCCT...AGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR TCA 72 bp | ATCAAAGGGAGAACTATGACATCATCAATGCATAGATaGGATAGGCATGAATGGAATGAGTTGCCCTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: IKGRTMTSSMHR*DRHEWNELPWL Trigger: AAGCCAGGGCAACTCATTCCATTCATGCCTATCTCATCTATGCATTGATGATGTCATAGTTCTCCCTTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR TCA 72 bp | TCACATCAGTCCAAATCAGTGCATCTAGGACCTGACTaGTCTATCTGTTGGCTAAGTTTCTTAAGTTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: SHQSKSVHLGPD*SICWLSFLSWQ Trigger: TTGCCAACTTAAGAAACTTAGCCAACAGATAGATCAGTCAGGTCCTAGATGCACTGATTTGGACTGATGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR CCA 72 bp | AGGAACATTCTCTCTAATCCTGGTCATGCGATGTTCTaGCCGGTTCAGTTTTTGGTTTTGCCTAAATGTTTT | + |
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Preference number: 3 (lower is better) Translates to: RNILSNPGHAMF*PVQFLVLPKCF Trigger: AAAACATTTAGGCAAAACCAAAAACTGAACCGGCCAGAACATCGCATGACCAGGATTAGAGAGAATGTTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| 3UTR CCA 72 bp | TCCAATCAGTATCACCTTATTCAAACTCTTGGGGACTaGCTTTCCATTTCAGTGAATGTTAACAGGGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: SNQYHLIQTLGD*LSISVNVNREL Trigger: TAACTCCCTGTTAACATTCACTGAAATGGAAAGCCAGTCCCCAAGAGTTTGAATAAGGTGATACTGATTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR TCA 72 bp | AGTGTAATTATCTACAATGAGTCCTGTGAGAAGGCATaGCAACATCAAAGACTTTCATCGCTGATTCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: SVIIYNESCEKA*QHQRLSSLILG Trigger: TCCTAGAATCAGCGATGAAAGTCTTTGATGTTGTCATGCCTTCTCACAGGACTCATTGTAGATAATTACACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR CAA 90 bp | TGTTGGCTAAGTTTCTTAAGTTGGCAAACATTACTTAGGAGAAAGCCTTGGGTTAATAGACCAAAATACTaGGAATCAGAAGGTCACAGT | + |
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Preference number: 3 (lower is better) Translates to: CWLSFLSWQTLLRRKPWVNRPKY*ESEGHS Trigger: ACTGTGACCTTCTGATTCCAAGTATTTTGGTCTATT...AACCCAAGGCTTTCTCCTAAGTAATGTTTGCCAACTTAAGAAACTTAGCCAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR GCA 72 bp | CAATGCATAGATGAGATAGGCATGAATGGAATGAGTTaGCCTGGCTTTATCAACAAATCAAAATATCTGACA | + |
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Preference number: 3 (lower is better) Translates to: QCIDEIGMNGMS*PGFINKSKYLT Trigger: TGTCAGATATTTTGATTTGTTGATAAAGCCAGGGCAACTCATTCCATTCATGCCTATCTCATCTATGCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR-3UTR CAA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCATGGGCTTTTTATTGCTaGAGTAGAAAGTGCTCATTA | + |
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Preference number: 3 (lower is better) Translates to: WIIKLTFPSCTTQKDKIAWAFYC*SRKCSL Trigger: TAATGAGCACTTTCTACTCAAGCAATAAAAAGCCCA...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| 3UTR GCA 72 bp | AAATGTTTTGAAAAGAGGAGTAATTCTGACTTGAGATaGCAATTAGGACTTGAGATACCTCTTGTTCCTAAA | + |
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Preference number: 3 (lower is better) Translates to: KCFEKRSNSDLR*QLGLEIPLVPK Trigger: TTTAGGAACAAGAGGTATCTCAAGTCCTAATTGGCATCTCAAGTCAGAATTACTCCTCTTTTCAAAACATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| CDS-3UTR GCA 90 bp | GCCAATGCTCTGGTCCATTATGGCTTTGAGGGCACACCTGCCACAGGTGTCTACCTTGGTTTTGGAGGCTaGCGGCGGTCCCTCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ANALVHYGFEGTPATGVYLGFGG*RRSLGC Trigger: GCAGCCGAGGGACCGCCGGCAGCCTCCAAAACCAAG...GTAGACACCTGTGGCAGGTGTGCCCTCAAAGCCATAATGGACCAGAGCATTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| CDS-3UTR GCA 90 bp | AGGGTCAGGCTCCTGGTTCCATTAAAATTAGATCTGCCCTCACGAGGTCAAGGACGGCGGTCCCTCGGCTaGGGAGGACGAGGAGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RVRLLVPLKLDLPSRGQGRRSLG*GGRGGV Trigger: AACCCCTCCTCGTCCTCCGCAGCCGAGGGACCGCCG...TCCTTGACCTCGTGAGGGCAGATCTAATTTTAATGGAACCAGGAGCCTGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| CDS-3UTR GCA 90 bp | GCCAATGCTCTGGTCCATTATGGCTTTGAGGGCACACCTGCCACAGGTGTCTACCTTCTGTGGTTTTGGTaGAGCGGGAGGAGGCACGGT | + |
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Preference number: 4 (lower is better) Translates to: ANALVHYGFEGTPATGVYLLWFW*SGRRHG Trigger: ACCGTGCCTCCTCCCGCTGCACCAAAACCACAGAAG...GTAGACACCTGTGGCAGGTGTGCCCTCAAAGCCATAATGGACCAGAGCATTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| CDS-3UTR GCA 90 bp | GGACATCAAAAATTCCTGACACCCTTCAACTTAGAAGAGAAAAAGGGAAAGGCCCGGCGGTCCCTCGGCTaGGGAGGACGAGGAGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: GHQKFLTPFNLEEKKGKARRSLG*GGRGGV Trigger: AACCCCTCCTCGTCCTCCGCAGCCGAGGGACCGCCG...GGCCTTTCCCTTTTTCTCTTCTAAGTTGAAGGGTGTCAGGAATTTTTGATGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| CDS-3UTR CCA 90 bp | AGGGTCAGGCTCCTGGTTCCATTAAAATTAGATCTGCCCTCACGAGGTCAAGGACACGGGTGTCAACCTTaGAGGAGGCGGTGGAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RVRLLVPLKLDLPSRGQGHGCQP*RRRWRV Trigger: AACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTG...TCCTTGACCTCGTGAGGGCAGATCTAATTTTAATGGAACCAGGAGCCTGACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| CDS-3UTR CCA 90 bp | GCCAATGCTCTGGTCCATTATGGCTTTGAGGGCACACCTGCCACAGGTGTCTACGCAGAAGGGTGCCATTaGTCTTTACAGGGTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: ANALVHYGFEGTPATGVYAEGCH*SLQGWQ Trigger: CTGCCAACCCTGTAAAGACCAATGGCACCCTTCTGC...GTAGACACCTGTGGCAGGTGTGCCCTCAAAGCCATAATGGACCAGAGCATTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| CDS-3UTR TCA 90 bp | GGTGTCTACCTCTCTGCAAACAGGAACATTCTCTCTAATCCTGGTCATGCGATGGTCGGCACCACTCTCTaGGGCTCTTCACACCTCACG | + |
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Preference number: 4 (lower is better) Translates to: GVYLSANRNILSNPGHAMVGTTL*GSSHLT Trigger: CGTGAGGTGTGAAGAGCCTCAGAGAGTGGTGCCGAC...CATCGCATGACCAGGATTAGAGAGAATGTTCCTGTTTGCAGAGAGGTAGACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| CDS-3UTR TCA 90 bp | TCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTACCGTCGGCACCACTCTCTaGGGCTCTTCACACCTCACG | + |
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Preference number: 4 (lower is better) Translates to: SQCTQYTNSHLELLSTVTVGTTL*GSSHLT Trigger: CGTGAGGTGTGAAGAGCCTCAGAGAGTGGTGCCGAC...GGTAACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| CDS-3UTR GCA 90 bp | AGGGTCAGGCTCCTGGTTCCATTAAAATTAGATCTGCCCTCACGAGGTCAAGGAGATAGCAGACGGGTGTaGTGGAGGTTTAATGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: RVRLLVPLKLDLPSRGQGDSRRV*WRFNEG Trigger: CCCCTCATTAAACCTCCAGCACACCCGTCTGCTATC...TCCTTGACCTCGTGAGGGCAGATCTAATTTTAATGGAACCAGGAGCCTGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| CDS-3UTR CCA 90 bp | TGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTTCTGCTCCTTCACCTTaGTTTTGGAGGCTGCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WNTVTFKQLAPMLWSIMASAPSP*FWRLPA Trigger: CGCCGGCAGCCTCCAAAACCAAGGTGAAGGAGCAGA...AGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | CAAACAGGAACATTCTCTCTAATCCTGGTCATGCGATGTTCTGGCCGGTTCAGTAGGCGGTGGAGGGTTTaGCTTTCTCAGGACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTGTFSLILVMRCSGRFSRRWRV*LSQDSQ Trigger: CTGACTGTCCTGAGAAAGCCAAACCCTCCACCGCCT...ACTGAACCGGCCAGAACATCGCATGACCAGGATTAGAGAGAATGTTCCTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTCCTTGGAGGAGGCGGTaGAGGGTTTGGCTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WNTVTFKQLAPMLWSIMAPWRRR*RVWLSQ Trigger: CTGAGAAAGCCAAACCCTCCACCGCCTCCTCCAAGG...AGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTCACGGGTGTCAACCTTaGAGGAGGCGGTGGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WSQCTQYTNSHLELLSTVHGCQP*RRRWRV Trigger: AACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTG...AACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | TGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTGGTCTTCTGTGGTTTTaGTGCAGCGGGAGGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WNTVTFKQLAPMLWSIMAGLLWF*CSGRRH Trigger: GTGCCTCCTCCCGCTGCACCAAAACCACAGAAGACC...AGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR GCA 90 bp | CATCCCAGCTCTTATAATAGACCAAAATACTTGGAATCAGAAGGTCACAGTTTGCTTGGTTTTGGAGGCTaGCGGCGGTCCCTCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPSSYNRPKYLESEGHSLLGFGG*RRSLGC Trigger: GCAGCCGAGGGACCGCCGGCAGCCTCCAAAACCAAG...CAAACTGTGACCTTCTGATTCCAAGTATTTTGGTCTATTATAAGAGCTGGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR GCA 90 bp | CAAACAGGAACATTCTCTCTAATCCTGGTCATGCGATGTTCTGGCCGGTTCAGTCTGTGCATCAGAGACTaGAACGGAGCCTTGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTGTFSLILVMRCSGRFSLCIRD*NGALSK Trigger: CTTGGACAAGGCTCCGTTGCAGTCTCTGATGCACAG...ACTGAACCGGCCAGAACATCGCATGACCAGGATTAGAGAGAATGTTCCTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTACCCTTCTGTGGTTTTGGTaGAGCGGGAGGAGGCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQCTQYTNSHLELLSTVTLLWFW*SGRRHG Trigger: ACCGTGCCTCCTCCCGCTGCACCAAAACCACAGAAG...GGTAACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTCCATTAAAATTAGATCTGCCCTCACGAGGTCAAGGAACAATTTGAAGCCTTCACCTTGGTTTTaGAGGCTGCCGGCGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGSIKIRSALTRSRNNLKPSPWF*RLPAVP Trigger: AGGGACCGCCGGCAGCCTCCAAAACCAAGGTGAAGG...CTTCAAATTGTTCCTTGACCTCGTGAGGGCAGATCTAATTTTAATGGAACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | GGACATCAAAAATTCCTGACACCCTTCAACTTAGAAGAGAAAAAGGGAAAGGCCCCTTGGAGGAGGCGGTaGAGGGTTTGGCTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHQKFLTPFNLEEKKGKAPWRRR*RVWLSQ Trigger: CTGAGAAAGCCAAACCCTCCACCGCCTCCTCCAAGG...GGCCTTTCCCTTTTTCTCTTCTAAGTTGAAGGGTGTCAGGAATTTTTGATGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | TGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTTGGAGCAGAGGTCCTTaGTGTGGGATCTTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WNTVTFKQLAPMLWSIMAWSRGP*CGIFPG Trigger: ACCTGGAAAGATCCCACACCAAGGACCTCTGCTCCA...AGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | GGGATCATTTCATTGGTCATTTGTGCTCCAAGGGAAGGGTTAGCTTCTTTGACACAGGATGGTCTTCTGTaGTTTTGGTGCAGCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIISLVICAPREGLASLTQDGLL*FWCSGR Trigger: CCTCCCGCTGCACCAAAACCACAGAAGACCATCCTG...TGTCAAAGAAGCTAACCCTTCCCTTGGAGCACAAATGACCAATGAAATGATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| 3UTR CAA 72 bp | CGAAGCGAAGGATGGAACACTGTAACTTTCAAGCAATaGGCGCCAATGCTCTGGTCCATTATGGCTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSEGWNTVTFKQ*APMLWSIMALR Trigger: CCTCAAAGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCATCCTTCGCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTCCATTAAAATTAGATCTGCCCTCACGAGGTCAAGGAACAATTTGAAGAGCAGACGGGTGTGCTaGAGGTTTAATGAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGSIKIRSALTRSRNNLKSRRVC*RFNEGS Trigger: GCTCCCCTCATTAAACCTCCAGCACACCCGTCTGCT...CTTCAAATTGTTCCTTGACCTCGTGAGGGCAGATCTAATTTTAATGGAACCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTACCGCAGAAGGGTGCCATTaGTCTTTACAGGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQCTQYTNSHLELLSTVTAEGCH*SLQGWQ Trigger: CTGCCAACCCTGTAAAGACCAATGGCACCCTTCTGC...GGTAACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | ATACGAAGCGAAGGATGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCCATTTGGAATTTTGTTaGGCCTCCCCGCTAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IRSEGWNTVTFKQLAPMLHLEFC*ASPLSL Trigger: GAGGCTTAGCGGGGAGGCCCAACAAAATTCCAAATG...GAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCATCCTTCGCTTCGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTTGGGATCTTTCCAGGTaGATGGACTGGTTCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: WNTVTFKQLAPMLWSIMAWDLSR*MDWFTV Trigger: CACAGTGAACCAGTCCATCCACCTGGAAAGATCCCA...AGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTTGGAGCAGAGGTCCTTaGTGTGGGATCTTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WSQCTQYTNSHLELLSTVWSRGP*CGIFPG Trigger: ACCTGGAAAGATCCCACACCAAGGACCTCTGCTCCA...AACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | GGCAAACATTACTTAGGAGAAAGCCTTGGGTTTGAAGGTAGAGAGAAGAGATTCCAGGATGGTCTTCTGTaGTTTTGGTGCAGCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKHYLGESLGFEGREKRFQDGLL*FWCSGR Trigger: CCTCCCGCTGCACCAAAACCACAGAAGACCATCCTG...GAATCTCTTCTCTCTACCTTCAAACCCAAGGCTTTCTCCTAAGTAATGTTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR TCA 90 bp | GTCTACCTCTCTGCAAACAGGAACATTCTCTCTAATCCTGGTCATGCGATGTTCCATTGGCCTGTTCTTTaGTCTTCTCTATGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VYLSANRNILSNPGHAMFHWPVL*SSLCWR Trigger: CCTCCAGCATAGAGAAGATCAAAGAACAGGCCAATG...GAACATCGCATGACCAGGATTAGAGAGAATGTTCCTGTTTGCAGAGAGGTAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR GCA 90 bp | GGCAAACATTACTTAGGAGAAAGCCTTGGGTTTGAAGGTAGAGAGAAGAGATTCCTGTGCATCAGAGACTaGAACGGAGCCTTGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKHYLGESLGFEGREKRFLCIRD*NGALSK Trigger: CTTGGACAAGGCTCCGTTGCAGTCTCTGATGCACAG...GAATCTCTTCTCTCTACCTTCAAACCCAAGGCTTTCTCCTAAGTAATGTTTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGCTCTTATAATAGACCAAAATACTTGGAATCAGAAGGTCACAGTTTGTCTGCTCCTTCACCTTaGTTTTGGAGGCTGCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HPSSYNRPKYLESEGHSLSAPSP*FWRLPA Trigger: CGCCGGCAGCCTCCAAAACCAAGGTGAAGGAGCAGA...CAAACTGTGACCTTCTGATTCCAAGTATTTTGGTCTATTATAAGAGCTGGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR TCA 90 bp | TCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTACCCATTGGCCTGTTCTTTaGTCTTCTCTATGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQCTQYTNSHLELLSTVTHWPVL*SSLCWR Trigger: CCTCCAGCATAGAGAAGATCAAAGAACAGGCCAATG...GGTAACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCACCTTCACCTTGGTTTTaGAGGCTGCCGGCGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WIIKLTFPSCTTQKDKIAPSPWF*RLPAVP Trigger: AGGGACCGCCGGCAGCCTCCAAAACCAAGGTGAAGG...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| CDS-3UTR CCA 90 bp | TGGTCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTGTCAGGGTGTCAATCTaGTCAACCACCTCCTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WSQCTQYTNSHLELLSTVVRVSI*STTSLS Trigger: ACTTAAGGAGGTGGTTGACCAGATTGACACCCTGAC...AACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | GGACATCAAAAATTCCTGACACCCTTCAACTTAGAAGAGAAAAAGGGAAAGGCCCATTTGGAATTTTGTTaGGCCTCCCCGCTAAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHQKFLTPFNLEEKKGKAHLEFC*ASPLSL Trigger: GAGGCTTAGCGGGGAGGCCCAACAAAATTCCAAATG...GGCCTTTCCCTTTTTCTCTTCTAAGTTGAAGGGTGTCAGGAATTTTTGATGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | ATACGAAGCGAAGGATGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGTCCAAGTTACTGTTaGGTATGCAGCAGATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IRSEGWNTVTFKQLAPMLCPSYC*VCSRCL Trigger: GAGACATCTGCTGCATACCCAACAGTAACTTGGACA...GAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCATCCTTCGCTTCGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | GGCAAACATTACTTAGGAGAAAGCCTTGGGTTTGAAGGTAGAGAGAAGAGATTCTGGGATCTTTCCAGGTaGATGGACTGGTTCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GKHYLGESLGFEGREKRFWDLSR*MDWFTV Trigger: CACAGTGAACCAGTCCATCCACCTGGAAAGATCCCA...GAATCTCTTCTCTCTACCTTCAAACCCAAGGCTTTCTCCTAAGTAATGTTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
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| CDS-3UTR GCA 90 bp | GTCTACCTCTCTGCAAACAGGAACATTCTCTCTAATCCTGGTCATGCGATGTTCAGTTACTGTTGGGTATaGAGCAGATGTCTCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VYLSANRNILSNPGHAMFSYCWV*SRCLHL Trigger: CAAATGGAGACATCTGCTGCATACCCAACAGTAACT...GAACATCGCATGACCAGGATTAGAGAGAATGTTCCTGTTTGCAGAGAGGTAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | TATGGGACATCAAAAATTCCTGACACCCTTCAACTTAGAAGAGAAAAAGGGAAAAGCAGACGGGTGTGCTaGAGGTTTAATGAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YGTSKIPDTLQLRREKGKSRRVC*RFNEGS Trigger: GCTCCCCTCATTAAACCTCCAGCACACCCGTCTGCT...TTTCCCTTTTTCTCTTCTAAGTTGAAGGGTGTCAGGAATTTTTGATGTCCCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTCCATTAAAATTAGATCTGCCCTCACGAGGTCAAGGAACAATTTGAAGGCAGATGTCTCCATTTaGAATTTTGTTGGGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSIKIRSALTRSRNNLKADVSI*NFVGPP Trigger: GGGAGGCCCAACAAAATTCCAAATGGAGACATCTGC...CTTCAAATTGTTCCTTGACCTCGTGAGGGCAGATCTAATTTTAATGGAACCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
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| CDS-3UTR CCA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCAGGTCTTCTGTGGTTTTaGTGCAGCGGGAGGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WIIKLTFPSCTTQKDKIAGLLWF*CSGRRH Trigger: GTGCCTCCTCCCGCTGCACCAAAACCACAGAAGACC...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCAAGGCGGTGGAGGGTTTaGCTTTCTCAGGACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WIIKLTFPSCTTQKDKIARRWRV*LSQDSQ Trigger: CTGACTGTCCTGAGAAAGCCAAACCCTCCACCGCCT...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | GGCAAACATTACTTAGGAGAAAGCCTTGGGTTTGAAGGTAGAGAGAAGAGATTCTGTCCAAGTTACTGTTaGGTATGCAGCAGATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKHYLGESLGFEGREKRFCPSYC*VCSRCL Trigger: GAGACATCTGCTGCATACCCAACAGTAACTTGGACA...GAATCTCTTCTCTCTACCTTCAAACCCAAGGCTTTCTCCTAAGTAATGTTTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | GGGATCATTTCATTGGTCATTTGTGCTCCAAGGGAAGGGTTAGCTTCTTTGACAATCTTTCCAGGTGGATaGACTGGTTCACTGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GIISLVICAPREGLASLTIFPGG*TGSLCK Trigger: TTTACACAGTGAACCAGTCCATCCACCTGGAAAGAT...TGTCAAAGAAGCTAACCCTTCCCTTGGAGCACAAATGACCAATGAAATGATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR GCA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCAGATAGCAGACGGGTGTaGTGGAGGTTTAATGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WIIKLTFPSCTTQKDKIADSRRV*WRFNEG Trigger: CCCCTCATTAAACCTCCAGCACACCCGTCTGCTATC...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | TGTTGGCTAAGTTTCTTAAGTTGGCAAACATTACTTAGGAGAAAGCCTTGGGTTGCAGATGTCTCCATTTaGAATTTTGTTGGGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CWLSFLSWQTLLRRKPWVADVSI*NFVGPP Trigger: GGGAGGCCCAACAAAATTCCAAATGGAGACATCTGC...AACCCAAGGCTTTCTCCTAAGTAATGTTTGCCAACTTAAGAAACTTAGCCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | GGACATCAAAAATTCCTGACACCCTTCAACTTAGAAGAGAAAAAGGGAAAGGCCATCTTTCCAGGTGGATaGACTGGTTCACTGTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GHQKFLTPFNLEEKKGKAIFPGG*TGSLCK Trigger: TTTACACAGTGAACCAGTCCATCCACCTGGAAAGAT...GGCCTTTCCCTTTTTCTCTTCTAAGTTGAAGGGTGTCAGGAATTTTTGATGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR GCA 90 bp | CATCCCAGCTCTTATAATAGACCAAAATACTTGGAATCAGAAGGTCACAGTTTGAGTTACTGTTGGGTATaGAGCAGATGTCTCCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPSSYNRPKYLESEGHSLSYCWV*SRCLHL Trigger: CAAATGGAGACATCTGCTGCATACCCAACAGTAACT...CAAACTGTGACCTTCTGATTCCAAGTATTTTGGTCTATTATAAGAGCTGGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGCTCTTATAATAGACCAAAATACTTGGAATCAGAAGGTCACAGTTTGTTTCTAATGGGAAATTaGGGAGATGAGGTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HPSSYNRPKYLESEGHSLFLMGN*GDEVED Trigger: ATCCTCCACCTCATCTCCCCAATTTCCCATTAGAAA...CAAACTGTGACCTTCTGATTCCAAGTATTTTGGTCTATTATAAGAGCTGGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CCA 90 bp | CTTTTGACCACCATGATGTTTTCTTTGTACAGTTTGGTTCAGAAACAAATCCACTGGATTTCCTCAGGATaGTCTTCTGTGGTTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTTMMFSLYSLVQKQIHWISSG*SSVVLV Trigger: CACCAAAACCACAGAAGACCATCCTGAGGAAATCCA...GTGGATTTGTTTCTGAACCAAACTGTACAAAGAAAACATCATGGTGGTCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTGACCACCATGATGTTTTCTTTGTACAGTTTGGTTCAGAAACAAATCCACTTTCTAATGGGAAATTaGGGAGATGAGGTGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLTTMMFSLYSLVQKQIHFLMGN*GDEVED Trigger: ATCCTCCACCTCATCTCCCCAATTTCCCATTAGAAA...GTGGATTTGTTTCTGAACCAAACTGTACAAAGAAAACATCATGGTGGTCAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CCA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCATGGATTTCCTCAGGATaGTCTTCTGTGGTTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WIIKLTFPSCTTQKDKIAWISSG*SSVVLV Trigger: CACCAAAACCACAGAAGACCATCCTGAGGAAATCCA...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR GCA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCAACTATGATCTTGATCTaGTCCTTCACCTTGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WIIKLTFPSCTTQKDKIATMILI*SFTLVL Trigger: CAAAACCAAGGTGAAGGAGCAGATCAAGATCATAGT...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| 3UTR CAA 72 bp | TTGCCTAAATGTTTTGAAAAGAGGAGTAATTCTGACTaGAGATGCCAATTAGGACTTGAGATACCTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPKCFEKRSNSD*RCQLGLEIPLV Trigger: AACAAGAGGTATCTCAAGTCCTAATTGGCATCTCAAGTCAGAATTACTCCTCTTTTCAAAACATTTAGGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS CCA 90 bp | TTCACACCTCACGGGTGTCAACCTTGGAGGAGGCGGTGGAGGGTTTaGCTTTCTCAGGACAGTCAGGATAGCAGACGGGTGTGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FTPHGCQPWRRRWRV*LSQDSQDSRRVCWR Trigger: CCTCCAGCACACCCGTCTGCTATCCTGACTGTCCTGAGAAAGCCAAACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTGAGGTGTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 90 bp | CTGAGGCTCTTCACACCTCACGGGTGTCAACCTTGGAGGAGGCGGTaGAGGGTTTGGCTTTCTCAGGACAGTCAGGATAGCAGACGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRLFTPHGCQPWRRR*RVWLSQDSQDSRRV Trigger: CACCCGTCTGCTATCCTGACTGTCCTGAGAAAGCCAAACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTGAGGTGTGAAGAGCCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 90 bp | CGGCACCACTCTCTGAGGCTCTTCACACCTCACGGGTGTCAACCTTaGAGGAGGCGGTGGAGGGTTTGGCTTTCTCAGGACAGTCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RHHSLRLFTPHGCQP*RRRWRVWLSQDSQD Trigger: ATCCTGACTGTCCTGAGAAAGCCAAACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTGAGGTGTGAAGAGCCTCAGAGAGTGGTGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 90 bp | TGTTGGGCCTCCCCGCTAAGCCTCCATTCCGCAGAAGGGTGCCATTaGTCTTTACAGGGTTGGCAGTCGGCACCACTCTCTGAGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CWASPLSLHSAEGCH*SLQGWQSAPLSEAL Trigger: AAGAGCCTCAGAGAGTGGTGCCGACTGCCAACCCTGTAAAGACCAATGGCACCCTTCTGCGGAATGGAGGCTTAGCGGGGAGGCCCAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 90 bp | CTAAGCCTCCATTCCGCAGAAGGGTGCCATTGGTCTTTACAGGGTTaGCAGTCGGCACCACTCTCTGAGGCTCTTCACACCTCACGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLHSAEGCHWSLQG*QSAPLSEALHTSRV Trigger: CACCCGTGAGGTGTGAAGAGCCTCAGAGAGTGGTGCCGACTGCCAACCCTGTAAAGACCAATGGCACCCTTCTGCGGAATGGAGGCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS GCA 90 bp | AGGTCGCCCAGGACTAATTCCAGATCCTCCACTATGATCTTGATCTaGTCCTTCACCTTGGTTTTGGAGGCTGCCGGCGGTCCCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSPRTNSRSSTMILI*SFTLVLEAAGGPSA Trigger: AGCCGAGGGACCGCCGGCAGCCTCCAAAACCAAGGTGAAGGAGCAGATCAAGATCATAGTGGAGGATCTGGAATTAGTCCTGGGCGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS GCA 90 bp | GAATTTTGTTGGGCCTCCCCGCTAAGCCTCCATTCCGCAGAAGGGTaGCATTGGTCTTTACAGGGTTGGCAGTCGGCACCACTCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EFCWASPLSLHSAEG*HWSLQGWQSAPLSE Trigger: CTCAGAGAGTGGTGCCGACTGCCAACCCTGTAAAGACCAATGGCACCCTTCTGCGGAATGGAGGCTTAGCGGGGAGGCCCAACAAAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCACACCTGCCACAGGTGTCTACCTCTCTGCAAACAGGAACATTCTCTCTACTATGCTGGAGGCTGTaGTCCCACTGGAGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RAHLPQVSTSLQTGTFSLLCWRL*SHWSCC Trigger: ACAGCAGCTCCAGTGGGACAACAGCCTCCAGCATAG...TAGAGAGAATGTTCCTGTTTGCAGAGAGGTAGACACCTGTGGCAGGTGTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTCAGGCTCCTGGTTCCATTAAAATTAGATCTGCCCTCACGAGGTCAAGGAATCTGCTCCTTCACCTaGGTTTTGGAGGCTGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVRLLVPLKLDLPSRGQGICSFT*VLEAAG Trigger: GCCGGCAGCCTCCAAAACCAAGGTGAAGGAGCAGAT...TCCTTGACCTCGTGAGGGCAGATCTAATTTTAATGGAACCAGGAGCCTGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CAA 90 bp | TGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTTCACGGGTGTCAACCTaGGAGGAGGCGGTGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WNTVTFKQLAPMLWSIMASRVST*EEAVEG Trigger: ACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTGA...AGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS CCA 90 bp | TGGAGGCTGTTGTCCCACTGGAGCTGCTGTTCAGAGTGTCTGTTTTaGAGCTGTCGGTCATCTCATCTTCCAGCTGTAGATCAGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WRLLSHWSCCSECLF*SCRSSHLPAVDQRS Trigger: TGACCTCTGATCTACAGCTGGAAGATGAGATGACCGACAGCTCCAAAACAGACACTCTGAACAGCAGCTCCAGTGGGACAACAGCCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 90 bp | AGTTACTGTTGGGTATGCAGCAGATGTCTCCATTTGGAATTTTGTTaGGCCTCCCCGCTAAGCCTCCATTCCGCAGAAGGGTGCCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SYCWVCSRCLHLEFC*ASPLSLHSAEGCHW Trigger: CCAATGGCACCCTTCTGCGGAATGGAGGCTTAGCGGGGAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAGTAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTACCTCACGGGTGTCAACCTaGGAGGAGGCGGTGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQCTQYTNSHLELLSTVTSRVST*EEAVEG Trigger: ACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTGA...GGTAACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS GCA 90 bp | TGGAGGGTTTGGCTTTCTCAGGACAGTCAGGATAGCAGACGGGTGTaGTGGAGGTTTAATGAGGGGAGCATTGGCCTGTTCTTTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: WRVWLSQDSQDSRRV*WRFNEGSIGLFFDL Trigger: AAGATCAAAGAACAGGCCAATGCTCCCCTCATTAAACCTCCAGCACACCCGTCTGCTATCCTGACTGTCCTGAGAAAGCCAAACCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS GCA 90 bp | GCATCAGAGACTGCAACGGAGCCTTGTCCAAGTTACTGTTGGGTATaGAGCAGATGTCTCCATTTGGAATTTTGTTGGGCCTCCCCGCTA | + |
|
Preference number: 5 (lower is better) Translates to: ASETATEPCPSYCWV*SRCLHLEFCWASPL Trigger: TAGCGGGGAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAGTAACTTGGACAAGGCTCCGTTGCAGTCTCTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 90 bp | AGGGTTTGGCTTTCTCAGGACAGTCAGGATAGCAGACGGGTGTGCTaGAGGTTTAATGAGGGGAGCATTGGCCTGTTCTTTGATCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RVWLSQDSQDSRRVC*RFNEGSIGLFFDLL Trigger: GAGAAGATCAAAGAACAGGCCAATGCTCCCCTCATTAAACCTCCAGCACACCCGTCTGCTATCCTGACTGTCCTGAGAAAGCCAAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS-3UTR CAA 90 bp | CCTGGTTCCATTAAAATTAGATCTGCCCTCACGAGGTCAAGGAACAATTTGAAGTCCTTCACCTTGGTTTaGGAGGCTGCCGGCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSIKIRSALTRSRNNLKSFTLV*EAAGGP Trigger: GGGACCGCCGGCAGCCTCCAAAACCAAGGTGAAGGA...CTTCAAATTGTTCCTTGACCTCGTGAGGGCAGATCTAATTTTAATGGAACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CAA 90 bp | CAAACAGGAACATTCTCTCTAATCCTGGTCATGCGATGTTCTGGCCGGTTCAGTATGGAGCAGAGGTCCTaGGTGTGGGATCTTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QTGTFSLILVMRCSGRFSMEQRS*VWDLSR Trigger: CCTGGAAAGATCCCACACCAAGGACCTCTGCTCCAT...ACTGAACCGGCCAGAACATCGCATGACCAGGATTAGAGAGAATGTTCCTGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS CCA 90 bp | GTCTGTGCATCAGAGACTGCAACGGAGCCTTGTCCAAGTTACTGTTaGGTATGCAGCAGATGTCTCCATTTGGAATTTTGTTGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCASETATEPCPSYC*VCSRCLHLEFCWAS Trigger: GGAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAGTAACTTGGACAAGGCTCCGTTGCAGTCTCTGATGCACAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS-3UTR CAA 90 bp | TGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTCGCAGAAGGGTGCCATaGGTCTTTACAGGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WNTVTFKQLAPMLWSIMARRRVP*VFTGLA Trigger: TGCCAACCCTGTAAAGACCAATGGCACCCTTCTGCG...AGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS TCA 90 bp | TATTGTACTTTTTCATTAAACCGAACTCGTTCCCGAGGCCCTGCCTaGGGACTCCTGTCCTTTTCAGGTCTGTGCATCAGAGACTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: YCTFSLNRTRSRGPA*GLLSFSGLCIRDCN Trigger: GTTGCAGTCTCTGATGCACAGACCTGAAAAGGACAGGAGTCCTCAGGCAGGGCCTCGGGAACGAGTTCGGTTTAATGAAAAAGTACAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS GCA 90 bp | ATGGTATTGTACTTTTTCATTAAACCGAACTCGTTCCCGAGGCCCTaGCTGAGGACTCCTGTCCTTTTCAGGTCTGTGCATCAGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: MVLYFFIKPNSFPRP*LRTPVLFRSVHQRL Trigger: CAGTCTCTGATGCACAGACCTGAAAAGGACAGGAGTCCTCAGGCAGGGCCTCGGGAACGAGTTCGGTTTAATGAAAAAGTACAATACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS-3UTR CAA 90 bp | CATCCCAGCTCTTATAATAGACCAAAATACTTGGAATCAGAAGGTCACAGTTTGTCCTTCACCTTGGTTTaGGAGGCTGCCGGCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HPSSYNRPKYLESEGHSLSFTLV*EAAGGP Trigger: GGGACCGCCGGCAGCCTCCAAAACCAAGGTGAAGGA...CAAACTGTGACCTTCTGATTCCAAGTATTTTGGTCTATTATAAGAGCTGGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CAA 90 bp | AGGGTCAGGCTCCTGGTTCCATTAAAATTAGATCTGCCCTCACGAGGTCAAGGAGCATTGGCCTGTTCTTaGATCTTCTCTATGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RVRLLVPLKLDLPSRGQGALACS*IFSMLE Trigger: CTCCAGCATAGAGAAGATCAAAGAACAGGCCAATGC...TCCTTGACCTCGTGAGGGCAGATCTAATTTTAATGGAACCAGGAGCCTGACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CAA 90 bp | TGGAACACTGTAACTTTCAAGCAATTGGCGCCAATGCTCTGGTCCATTATGGCTGACTGCAACGGAGCCTaGTCCAAGTTACTGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WNTVTFKQLAPMLWSIMADCNGA*SKLLLG Trigger: ACCCAACAGTAACTTGGACAAGGCTCCGTTGCAGTC...AGCCATAATGGACCAGAGCATTGGCGCCAATTGCTTGAAAGTTACAGTGTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS-3UTR CAA 90 bp | GGACATCAAAAATTCCTGACACCCTTCAACTTAGAAGAGAAAAAGGGAAAGGCCCGCAGAAGGGTGCCATaGGTCTTTACAGGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GHQKFLTPFNLEEKKGKARRRVP*VFTGLA Trigger: TGCCAACCCTGTAAAGACCAATGGCACCCTTCTGCG...GGCCTTTCCCTTTTTCTCTTCTAAGTTGAAGGGTGTCAGGAATTTTTGATGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CAA 90 bp | GGACATCAAAAATTCCTGACACCCTTCAACTTAGAAGAGAAAAAGGGAAAGGCCACCTCCTTAAGTTCTTaGGCCACGTCCTTCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GHQKFLTPFNLEEKKGKATSLSS*ATSFRS Trigger: CGACCTGAAGGACGTGGCCAAAGAACTTAAGGAGGT...GGCCTTTCCCTTTTTCTCTTCTAAGTTGAAGGGTGTCAGGAATTTTTGATGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CAA 90 bp | TGTTGGCTAAGTTTCTTAAGTTGGCAAACATTACTTAGGAGAAAGCCTTGGGTTCTATGCTGGAGGCTGTaGTCCCACTGGAGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CWLSFLSWQTLLRRKPWVLCWRL*SHWSCC Trigger: ACAGCAGCTCCAGTGGGACAACAGCCTCCAGCATAG...AACCCAAGGCTTTCTCCTAAGTAATGTTTGCCAACTTAAGAAACTTAGCCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CAA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCAATCTGCTCCTTCACCTaGGTTTTGGAGGCTGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: WIIKLTFPSCTTQKDKIAICSFT*VLEAAG Trigger: GCCGGCAGCCTCCAAAACCAAGGTGAAGGAGCAGAT...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CAA 90 bp | TCTCAATGTACACAGTATACCAATTCCCACCTAGAGTTGCTCTCCACTGTTACCTTGTCCAAGTTACTGTaGGGTATGCAGCAGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQCTQYTNSHLELLSTVTLSKLL*GMQQMS Trigger: AGACATCTGCTGCATACCCAACAGTAACTTGGACAA...GGTAACAGTGGAGAGCAACTCTAGGTGGGAATTGGTATACTGTGTACATTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CAA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCAATGGAGCAGAGGTCCTaGGTGTGGGATCTTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WIIKLTFPSCTTQKDKIAMEQRS*VWDLSR Trigger: CCTGGAAAGATCCCACACCAAGGACCTCTGCTCCAT...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CAA 90 bp | CATCCCAGCTCTTATAATAGACCAAAATACTTGGAATCAGAAGGTCACAGTTTGGCATTGGCCTGTTCTTaGATCTTCTCTATGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HPSSYNRPKYLESEGHSLALACS*IFSMLE Trigger: CTCCAGCATAGAGAAGATCAAAGAACAGGCCAATGC...CAAACTGTGACCTTCTGATTCCAAGTATTTTGGTCTATTATAAGAGCTGGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CAA 90 bp | TGGATCATTAAGCTTACATTCCCCTCATGTACAACACAGAAAGATAAAATAGCAGACTGCAACGGAGCCTaGTCCAAGTTACTGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WIIKLTFPSCTTQKDKIADCNGA*SKLLLG Trigger: ACCCAACAGTAACTTGGACAAGGCTCCGTTGCAGTC...TGCTATTTTATCTTTCTGTGTTGTACATGAGGGGAATGTAAGCTTAATGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116639.4 |
||
| CDS-3UTR CAA 90 bp | CTTTTGACCACCATGATGTTTTCTTTGTACAGTTTGGTTCAGAAACAAATCCACTTGTCCAAGTTACTGTaGGGTATGCAGCAGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLTTMMFSLYSLVQKQIHLSKLL*GMQQMS Trigger: AGACATCTGCTGCATACCCAACAGTAACTTGGACAA...GTGGATTTGTTTCTGAACCAAACTGTACAAAGAAAACATCATGGTGGTCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235541.2 |
||
| CDS GCA 72 bp | GATCTTGATCTGCTCCTTCACCTTGGTTTTGGAGGCTaGCGGCGGTCCCTCGGCTGCGGAGGACGAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DLDLLLHLGFGG*RRSLGCGGRGG Trigger: CCCTCCTCGTCCTCCGCAGCCGAGGGACCGCCGGCAGCCTCCAAAACCAAGGTGAAGGAGCAGATCAAGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS GCA 72 bp | TGGGCCTCCCCGCTAAGCCTCCATTCCGCAGAAGGGTaGCATTGGTCTTTACAGGGTTGGCAGTCGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: WASPLSLHSAEG*HWSLQGWQSAP Trigger: TGGTGCCGACTGCCAACCCTGTAAAGACCAATGGCACCCTTCTGCGGAATGGAGGCTTAGCGGGGAGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS GCA 72 bp | GGTGGATTTCCTCAGGATGGTCTTCTGTGGTTTTGGTaGAGCGGGAGGAGGCACGGTTGCAGGTGTGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GGFPQDGLLWFW*SGRRHGCRCGR Trigger: CCTCCCACACCTGCAACCGTGCCTCCTCCCGCTGCACCAAAACCACAGAAGACCATCCTGAGGAAATCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 72 bp | CACGGGTGTCAACCTTGGAGGAGGCGGTGGAGGGTTTaGCTTTCTCAGGACAGTCAGGATAGCAGACGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HGCQPWRRRWRV*LSQDSQDSRRV Trigger: CACCCGTCTGCTATCCTGACTGTCCTGAGAAAGCCAAACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CAA 72 bp | CTCCCCGCTAAGCCTCCATTCCGCAGAAGGGTGCCATaGGTCTTTACAGGGTTGGCAGTCGGCACCACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPAKPPFRRRVP*VFTGLAVGTTL Trigger: GAGAGTGGTGCCGACTGCCAACCCTGTAAAGACCAATGGCACCCTTCTGCGGAATGGAGGCTTAGCGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CAA 90 bp | TCGGCACCACTCTCTGAGGCTCTTCACACCTCACGGGTGTCAACCTaGGAGGAGGCGGTGGAGGGTTTGGCTTTCTCAGGACAGTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SAPLSEALHTSRVST*EEAVEGLAFSGQSG Trigger: TCCTGACTGTCCTGAGAAAGCCAAACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTGAGGTGTGAAGAGCCTCAGAGAGTGGTGCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 72 bp | TCTCTGAGGCTCTTCACACCTCACGGGTGTCAACCTTaGAGGAGGCGGTGGAGGGTTTGGCTTTCTCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLRLFTPHGCQP*RRRWRVWLSQD Trigger: GTCCTGAGAAAGCCAAACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTGAGGTGTGAAGAGCCTCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 72 bp | TCCCCGCTAAGCCTCCATTCCGCAGAAGGGTGCCATTaGTCTTTACAGGGTTGGCAGTCGGCACCACTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPLSLHSAEGCH*SLQGWQSAPLS Trigger: AGAGAGTGGTGCCGACTGCCAACCCTGTAAAGACCAATGGCACCCTTCTGCGGAATGGAGGCTTAGCGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CAA 72 bp | CTCTCTGAGGCTCTTCACACCTCACGGGTGTCAACCTaGGAGGAGGCGGTGGAGGGTTTGGCTTTCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSEALHTSRVST*EEAVEGLAFSG Trigger: TCCTGAGAAAGCCAAACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTGAGGTGTGAAGAGCCTCAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 72 bp | TTCACACCTCACGGGTGTCAACCTTGGAGGAGGCGGTaGAGGGTTTGGCTTTCTCAGGACAGTCAGGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: FTPHGCQPWRRR*RVWLSQDSQDS Trigger: GCTATCCTGACTGTCCTGAGAAAGCCAAACCCTCCACCGCCTCCTCCAAGGTTGACACCCGTGAGGTGTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CCA 72 bp | CATTCCGCAGAAGGGTGCCATTGGTCTTTACAGGGTTaGCAGTCGGCACCACTCTCTGAGGCTCTTCACACC | + |
|
Preference number: 6 (lower is better) Translates to: HSAEGCHWSLQG*QSAPLSEALHT Trigger: GGTGTGAAGAGCCTCAGAGAGTGGTGCCGACTGCCAACCCTGTAAAGACCAATGGCACCCTTCTGCGGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS CAA 90 bp | GACGGGTGTGCTGGAGGTTTAATGAGGGGAGCATTGGCCTGTTCTTaGATCTTCTCTATGCTGGAGGCTGTTGTCCCACTGGAGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DGCAGGLMRGALACS*IFSMLEAVVPLELL Trigger: CAGCAGCTCCAGTGGGACAACAGCCTCCAGCATAGAGAAGATCAAAGAACAGGCCAATGCTCCCCTCATTAAACCTCCAGCACACCCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
||
| CDS GCA 72 bp | TGGCTTTCTCAGGACAGTCAGGATAGCAGACGGGTGTaGTGGAGGTTTAATGAGGGGAGCATTGGCCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: WLSQDSQDSRRV*WRFNEGSIGLF Trigger: GAACAGGCCAATGCTCCCCTCATTAAACCTCCAGCACACCCGTCTGCTATCCTGACTGTCCTGAGAAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CCA 72 bp | TGGGTATGCAGCAGATGTCTCCATTTGGAATTTTGTTaGGCCTCCCCGCTAAGCCTCCATTCCGCAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: WVCSRCLHLEFC*ASPLSLHSAEG Trigger: CCCTTCTGCGGAATGGAGGCTTAGCGGGGAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 90 bp | CTGGAGGCTGTTGTCCCACTGGAGCTGCTGTTCAGAGTGTCTGTTTaGGAGCTGTCGGTCATCTCATCTTCCAGCTGTAGATCAGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LEAVVPLELLFRVSV*ELSVISSSSCRSEV Trigger: GACCTCTGATCTACAGCTGGAAGATGAGATGACCGACAGCTCCAAAACAGACACTCTGAACAGCAGCTCCAGTGGGACAACAGCCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 72 bp | TTGGGTATGCAGCAGATGTCTCCATTTGGAATTTTGTaGGGCCTCCCCGCTAAGCCTCCATTCCGCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LGMQQMSPFGIL*GLPAKPPFRRR Trigger: CCTTCTGCGGAATGGAGGCTTAGCGGGGAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 72 bp | CTGTTGGGTATGCAGCAGATGTCTCCATTTGGAATTTaGTTGGGCCTCCCCGCTAAGCCTCCATTCCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLGMQQMSPFGI*LGLPAKPPFRR Trigger: TCTGCGGAATGGAGGCTTAGCGGGGAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 90 bp | GTCAGGATAGCAGACGGGTGTGCTGGAGGTTTAATGAGGGGAGCATaGGCCTGTTCTTTGATCTTCTCTATGCTGGAGGCTGTTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: VRIADGCAGGLMRGA*ACSLIFSMLEAVVP Trigger: TGGGACAACAGCCTCCAGCATAGAGAAGATCAAAGAACAGGCCAATGCTCCCCTCATTAAACCTCCAGCACACCCGTCTGCTATCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 90 bp | TCCAAGTTACTGTTGGGTATGCAGCAGATGTCTCCATTTGGAATTTaGTTGGGCCTCCCCGCTAAGCCTCCATTCCGCAGAAGGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: SKLLLGMQQMSPFGI*LGLPAKPPFRRRVP Trigger: TGGCACCCTTCTGCGGAATGGAGGCTTAGCGGGGAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAGTAACTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 90 bp | AAGTTACTGTTGGGTATGCAGCAGATGTCTCCATTTGGAATTTTGTaGGGCCTCCCCGCTAAGCCTCCATTCCGCAGAAGGGTGCCATTG | + |
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Preference number: 6 (lower is better) Translates to: KLLLGMQQMSPFGIL*GLPAKPPFRRRVPL Trigger: CAATGGCACCCTTCTGCGGAATGGAGGCTTAGCGGGGAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAGTAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 90 bp | GAGCCTTGTCCAAGTTACTGTTGGGTATGCAGCAGATGTCTCCATTaGGAATTTTGTTGGGCCTCCCCGCTAAGCCTCCATTCCGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: EPCPSYCWVCSRCLH*EFCWASPLSLHSAE Trigger: TTCTGCGGAATGGAGGCTTAGCGGGGAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAGTAACTTGGACAAGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS TCA 72 bp | TTTTCATTAAACCGAACTCGTTCCCGAGGCCCTGCCTaGGGACTCCTGTCCTTTTCAGGTCTGTGCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: FSLNRTRSRGPA*GLLSFSGLCIR Trigger: TCTGATGCACAGACCTGAAAAGGACAGGAGTCCTCAGGCAGGGCCTCGGGAACGAGTTCGGTTTAATGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS GCA 72 bp | AGGACTAATTCCAGATCCTCCACTATGATCTTGATCTaGTCCTTCACCTTGGTTTTGGAGGCTGCCGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: RTNSRSSTMILI*SFTLVLEAAGG Trigger: ACCGCCGGCAGCCTCCAAAACCAAGGTGAAGGAGCAGATCAAGATCATAGTGGAGGATCTGGAATTAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CCA 72 bp | CTTTCTCAGGACAGTCAGGATAGCAGACGGGTGTGCTaGAGGTTTAATGAGGGGAGCATTGGCCTGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LSQDSQDSRRVC*RFNEGSIGLFF Trigger: AAAGAACAGGCCAATGCTCCCCTCATTAAACCTCCAGCACACCCGTCTGCTATCCTGACTGTCCTGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 72 bp | GTTGTCCCACTGGAGCTGCTGTTCAGAGTGTCTGTTTaGGAGCTGTCGGTCATCTCATCTTCCAGCTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: VVPLELLFRVSV*ELSVISSSSCR Trigger: TCTACAGCTGGAAGATGAGATGACCGACAGCTCCAAAACAGACACTCTGAACAGCAGCTCCAGTGGGACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 72 bp | GCTGGAGGTTTAATGAGGGGAGCATTGGCCTGTTCTTaGATCTTCTCTATGCTGGAGGCTGTTGTCCCACTG | + |
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Preference number: 6 (lower is better) Translates to: AGGLMRGALACS*IFSMLEAVVPL Trigger: CAGTGGGACAACAGCCTCCAGCATAGAGAAGATCAAAGAACAGGCCAATGCTCCCCTCATTAAACCTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 90 bp | GGTCTGTGCATCAGAGACTGCAACGGAGCCTTGTCCAAGTTACTGTaGGGTATGCAGCAGATGTCTCCATTTGGAATTTTGTTGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GLCIRDCNGALSKLL*GMQQMSPFGILLGL Trigger: GAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAGTAACTTGGACAAGGCTCCGTTGCAGTCTCTGATGCACAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS GCA 72 bp | TACTTTTTCATTAAACCGAACTCGTTCCCGAGGCCCTaGCTGAGGACTCCTGTCCTTTTCAGGTCTGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: YFFIKPNSFPRP*LRTPVLFRSVH Trigger: ATGCACAGACCTGAAAAGGACAGGAGTCCTCAGGCAGGGCCTCGGGAACGAGTTCGGTTTAATGAAAAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CCA 72 bp | TTGTCCCACTGGAGCTGCTGTTCAGAGTGTCTGTTTTaGAGCTGTCGGTCATCTCATCTTCCAGCTGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: LSHWSCCSECLF*SCRSSHLPAVD Trigger: ATCTACAGCTGGAAGATGAGATGACCGACAGCTCCAAAACAGACACTCTGAACAGCAGCTCCAGTGGGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 72 bp | CCAAGTTACTGTTGGGTATGCAGCAGATGTCTCCATTaGGAATTTTGTTGGGCCTCCCCGCTAAGCCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: PSYCWVCSRCLH*EFCWASPLSLH Trigger: ATGGAGGCTTAGCGGGGAGGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAGTAACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS GCA 72 bp | ACTGCAACGGAGCCTTGTCCAAGTTACTGTTGGGTATaGAGCAGATGTCTCCATTTGGAATTTTGTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: TATEPCPSYCWV*SRCLHLEFCWA Trigger: GGCCCAACAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAGTAACTTGGACAAGGCTCCGTTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 90 bp | CTTTATGTTATACCGGCTCTCACAGTCAGGACAATAGCCATGGTATaGTACTTTTTCATTAAACCGAACTCGTTCCCGAGGCCCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LYVIPALTVRTIAMV*YFFIKPNSFPRPCL Trigger: CAGGCAGGGCCTCGGGAACGAGTTCGGTTTAATGAAAAAGTACAATACCATGGCTATTGTCCTGACTGTGAGAGCCGGTATAACATAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 72 bp | ATCAGAGACTGCAACGGAGCCTTGTCCAAGTTACTGTaGGGTATGCAGCAGATGTCTCCATTTGGAATTTTG | + |
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Preference number: 6 (lower is better) Translates to: IRDCNGALSKLL*GMQQMSPFGIL Trigger: CAAAATTCCAAATGGAGACATCTGCTGCATACCCAACAGTAACTTGGACAAGGCTCCGTTGCAGTCTCTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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| CDS CAA 72 bp | ATACCGGCTCTCACAGTCAGGACAATAGCCATGGTATaGTACTTTTTCATTAAACCGAACTCGTTCCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: IPALTVRTIAMV*YFFIKPNSFPR Trigger: CCTCGGGAACGAGTTCGGTTTAATGAAAAAGTACAATACCATGGCTATTGTCCTGACTGTGAGAGCCGGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000116639.4 ENSMUST00000235541.2 |
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