Pregenerated sensors for PRR15L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047040Ensembl transcript IDs: ENSMUST00000054311.6, ENSMUST00000062172.6, ENSMUST00000107633.2, ENSMUST00000107636.4
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCAGGGGGAGCCCAGTGGCTAGGGTTGGCCTTTACTGGGCAGTaGAGGCCAGTATCGGGCAGCCTCCCTGCCTCCCCCTTTCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: PAGGAQWLGLAFTGQ*RPVSGSLPASPFLC Trigger: GCAGAGAAAGGGGGAGGCAGGGAGGCTGCCCGATACTGGCCTCCACTGCCCAGTAAAGGCCAACCCTAGCCACTGGGCTCCCCCTGCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR CCA 90 bp | CTTGGGTCCAGCAGGGGGAGCCCAGTGGCTAGGGTTGGCCTTTACTaGGCAGTGGAGGCCAGTATCGGGCAGCCTCCCTGCCTCCCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LGSSRGSPVARVGLY*AVEASIGQPPCLPL Trigger: AAGGGGGAGGCAGGGAGGCTGCCCGATACTGGCCTCCACTGCCCAGTAAAGGCCAACCCTAGCCACTGGGCTCCCCCTGCTGGACCCAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR GCA 90 bp | AACCGCCAAGTGGCTGTGACCAAAGAGGCCAGCGTGGCAAGCTCCTaGCTCGGACCCCACCAGTGGCAGGGAGCAGGGCAGCGCTATGGT | + |
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Preference number: 1 (lower is better) Translates to: NRQVAVTKEASVASS*LGPHQWQGAGQRYG Trigger: ACCATAGCGCTGCCCTGCTCCCTGCCACTGGTGGGGTCCGAGGCAGGAGCTTGCCACGCTGGCCTCTTTGGTCACAGCCACTTGGCGGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR TCA 90 bp | AGAACCGGGTGTTCCTGCCAGCAGGGATCAACCGCCAAGTGGCTGTaGCCAAAGAGGCCAGCGTGGCAAGCTCCTGCCTCGGACCCCACC | + |
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Preference number: 1 (lower is better) Translates to: RTGCSCQQGSTAKWL*PKRPAWQAPASDPT Trigger: GGTGGGGTCCGAGGCAGGAGCTTGCCACGCTGGCCTCTTTGGTCACAGCCACTTGGCGGTTGATCCCTGCTGGCAGGAACACCCGGTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR TCA 90 bp | CTTCCTCAGCAACAGCTCCCTAGGGTGGGGTGTCCCAGCACACTCTaGGGAGCTGACCCAAAGGCTGCTGGACCACAGCAGAGTAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: LPQQQLPRVGCPSTL*GADPKAAGPQQSSH Trigger: GTGGCTACTCTGCTGTGGTCCAGCAGCCTTTGGGTCAGCTCCTCAGAGTGTGCTGGGACACCCCACCCTAGGGAGCTGTTGCTGAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR GCA 90 bp | GGGGAGAGGGTGGAGTCCGTCCTGCTCTCTGTCTATTCTCTGCTGTaGCACCTCCCTGTGAGGCAAGCCACTGTGTCAAGGACAGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GERVESVLLSVYSLL*HLPVRQATVSRTAA Trigger: TGCTGCTGTCCTTGACACAGTGGCTTGCCTCACAGGGAGGTGGCACAGCAGAGAATAGACAGAGAGCAGGACGGACTCCACCCTCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR CCA 90 bp | GGATTTACAGGACTTTTCTGCTTGGGTCCAGCAGGGGGAGCCCAGTaGCTAGGGTTGGCCTTTACTGGGCAGTGGAGGCCAGTATCGGGC | + |
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Preference number: 1 (lower is better) Translates to: GFTGLFCLGPAGGAQ*LGLAFTGQWRPVSG Trigger: GCCCGATACTGGCCTCCACTGCCCAGTAAAGGCCAACCCTAGCCACTGGGCTCCCCCTGCTGGACCCAAGCAGAAAAGTCCTGTAAATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR GCA 90 bp | TCTGGGCTAGCCTTCAGTAGCACCCCGGGGAGTACGCGTGTCCCTTaGCCCTCCACTCCTGGGAGCAAAGTTCCAGGAAGTTTACTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SGLAFSSTPGSTRVP*PSTPGSKVPGSLLL Trigger: AAGGAGTAAACTTCCTGGAACTTTGCTCCCAGGAGTGGAGGGGCAAGGGACACGCGTACTCCCCGGGGTGCTACTGAAGGCTAGCCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
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| 3UTR CCA 90 bp | CACAGTGTGGGTCCTAGAGGACACCCAGCCCCTGGGCTAACCAGTTaGCTTTCTCCCATTGGTTCCAGAGCCTGCACATTCCCCTTGGTG | + |
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Preference number: 1 (lower is better) Translates to: HSVGPRGHPAPGLTS*LSPIGSRACTFPLV Trigger: CACCAAGGGGAATGTGCAGGCTCTGGAACCAATGGGAGAAAGCCAACTGGTTAGCCCAGGGGCTGGGTGTCCTCTAGGACCCACACTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR GCA 90 bp | CCTCAGCAGACAGGACAGTTAGGGAATGGATTTACAGGACTTTTCTaGTTGGGTCCAGCAGGGGGAGCCCAGTGGCTAGGGTTGGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: PQQTGQLGNGFTGLF*LGPAGGAQWLGLAF Trigger: AAAGGCCAACCCTAGCCACTGGGCTCCCCCTGCTGGACCCAAGCAGAAAAGTCCTGTAAATCCATTCCCTAACTGTCCTGTCTGCTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR GCA 90 bp | CTGGATTGGCCCAGGCAACAGTCACACGGTAGAGAAAGTAGAGGATaGAGCGAATCAAATTCACCCTTCTCCCTGTTGCCTGGGGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: LDWPRQQSHGRESRG*SESNSPFSLLPGER Trigger: CCTCTCCCCAGGCAACAGGGAGAAGGGTGAATTTGATTCGCTGCATCCTCTACTTTCTCTACCGTGTGACTGTTGCCTGGGCCAATCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR CCA 90 bp | GTGTTTGTTTTGGCAATAAACTTCCTCAGCAACAGCTCCCTAGGGTaGGGTGTCCCAGCACACTCTGAGGAGCTGACCCAAAGGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: VFVLAINFLSNSSLG*GVPAHSEELTQRLL Trigger: CAGCAGCCTTTGGGTCAGCTCCTCAGAGTGTGCTGGGACACCCCACCCTAGGGAGCTGTTGCTGAGGAAGTTTATTGCCAAAACAAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR CCA 90 bp | CCTGCCTCCCCCTTTCTCTGCTTGGGTTGCTTCCCAGTGAAACTGTaGTTGATAACCAGAGCCTCTCCCGTCTCCTGCACATATTTACCC | + |
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Preference number: 1 (lower is better) Translates to: PASPFLCLGCFPVKL*LITRASPVSCTYLP Trigger: GGGTAAATATGTGCAGGAGACGGGAGAGGCTCTGGTTATCAACCACAGTTTCACTGGGAAGCAACCCAAGCAGAGAAAGGGGGAGGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR TCA 90 bp | TGTAAGAAAAGGTCTACAGCCCCGAGGAGCTCTGGGCGTGTTTCTTaGGGTAGGGCCTTGCTGTATAACCCAGGCCAACCTTTGAACCTG | + |
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Preference number: 1 (lower is better) Translates to: CKKRSTAPRSSGRVS*GRALLYNPGQPLNL Trigger: CAGGTTCAAAGGTTGGCCTGGGTTATACAGCAAGGCCCTACCTCAAGAAACACGCCCAGAGCTCCTCGGGGCTGTAGACCTTTTCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR GCA 90 bp | GAGAAAGTAGAGGATGCAGCGAATCAAATTCACCCTTCTCCCTGTTaGCTGGGGAGAGGGTGGAGTCCGTCCTGCTCTCTGTCTATTCTC | + |
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Preference number: 1 (lower is better) Translates to: EKVEDAANQIHPSPC*LGRGWSPSCSLSIL Trigger: GAGAATAGACAGAGAGCAGGACGGACTCCACCCTCTCCCCAGGCAACAGGGAGAAGGGTGAATTTGATTCGCTGCATCCTCTACTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR CCA 90 bp | CCAAGGAAACCACGGTCACGTGACTTCCGGAAACATTGCTCTCCCTaGATTGGCCCAGGCAACAGTCACACGGTAGAGAAAGTAGAGGAT | + |
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Preference number: 1 (lower is better) Translates to: PRKPRSRDFRKHCSP*IGPGNSHTVEKVED Trigger: ATCCTCTACTTTCTCTACCGTGTGACTGTTGCCTGGGCCAATCCAGGGAGAGCAATGTTTCCGGAAGTCACGTGACCGTGGTTTCCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
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| 3UTR TCA 90 bp | GTGTTTCTTGAGGTAGGGCCTTGCTGTATAACCCAGGCCAACCTTTaGACCTGCAATCCTGTCTCACTCAGCAAAGAGCCGAGGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: VFLEVGPCCITQANL*TCNPVSLSKEPRFQ Trigger: CTGGAACCTCGGCTCTTTGCTGAGTGAGACAGGATTGCAGGTTCAAAGGTTGGCCTGGGTTATACAGCAAGGCCCTACCTCAAGAAACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR GCA 90 bp | TTCCCAGTGAAACTGTGGTTGATAACCAGAGCCTCTCCCGTCTCCTaGACATATTTACCCTCTCGGTTCTTCCTCCTAGCGGCTCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: FPVKLWLITRASPVS*TYLPSRFFLLAAPE Trigger: TTCAGGAGCCGCTAGGAGGAAGAACCGAGAGGGTAAATATGTGCAGGAGACGGGAGAGGCTCTGGTTATCAACCACAGTTTCACTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR GCA 90 bp | CCATGCCACACCAACAGACCACAAGAGACATTCAAGAATAGAAGGTaGTGGGGTGGGCAGGGCAGGGCATTGTGGTTTATACAGACAGAT | + |
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Preference number: 1 (lower is better) Translates to: PCHTNRPQETFKNRR*WGGQGRALWFIQTD Trigger: ATCTGTCTGTATAAACCACAATGCCCTGCCCTGCCCACCCCAGCACCTTCTATTCTTGAATGTCTCTTGTGGTCTGTTGGTGTGGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR CCA 90 bp | TGCCACACCAACAGACCACAAGAGACATTCAAGAATAGAAGGTGCTaGGGTGGGCAGGGCAGGGCATTGTGGTTTATACAGACAGATGAG | + |
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Preference number: 1 (lower is better) Translates to: CHTNRPQETFKNRRC*GGQGRALWFIQTDE Trigger: CTCATCTGTCTGTATAAACCACAATGCCCTGCCCTGCCCACCCCAGCACCTTCTATTCTTGAATGTCTCTTGTGGTCTGTTGGTGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR TCA 90 bp | GTTGGCTTTCTCCCATTGGTTCCAGAGCCTGCACATTCCCCTTGGTaGCTGTCACCTCCCAGTAGCCTACAACATAAACAATTTCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: VGFLPLVPEPAHSPW*LSPPSSLQHKQFPV Trigger: GACAGGAAATTGTTTATGTTGTAGGCTACTGGGAGGTGACAGTCACCAAGGGGAATGTGCAGGCTCTGGAACCAATGGGAGAAAGCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR CCA 90 bp | ACATTCAAGAATAGAAGGTGCTGGGGTGGGCAGGGCAGGGCATTGTaGTTTATACAGACAGATGAGCTAAACAGAGTTAGCCAAGCGCCT | + |
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Preference number: 1 (lower is better) Translates to: TFKNRRCWGGQGRAL*FIQTDELNRVSQAP Trigger: AGGCGCTTGGCTAACTCTGTTTAGCTCATCTGTCTGTATAAACCACAATGCCCTGCCCTGCCCACCCCAGCACCTTCTATTCTTGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR TCA 90 bp | CTCACTCAGCAAAGAGCCGAGGTTCCAGGGATTTGCTCTCAGACCTaGCTTCAGAGACATCTCTCTTTGAAACGTTACCAAACTCATCAA | + |
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Preference number: 1 (lower is better) Translates to: LTQQRAEVPGICSQT*LQRHLSLKRYQTHQ Trigger: TTGATGAGTTTGGTAACGTTTCAAAGAGAGATGTCTCTGAAGTCAGGTCTGAGAGCAAATCCCTGGAACCTCGGCTCTTTGCTGAGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR TCA 90 bp | TTCCAGGGATTTGCTCTCAGACCTGACTTCAGAGACATCTCTCTTTaGAACGTTACCAAACTCATCAAGGTGGCACCAGAATTTAAATCG | + |
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Preference number: 1 (lower is better) Translates to: FQGFALRPDFRDISL*NVTKLIKVAPEFKS Trigger: CGATTTAAATTCTGGTGCCACCTTGATGAGTTTGGTAACGTTTCAAAGAGAGATGTCTCTGAAGTCAGGTCTGAGAGCAAATCCCTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGATGCAGCGAATCAAATTCACCCTTCTCCCTGTTGCCTGGGGAGAGGGTGGCTCGGACCCCACCAGTaGCAGGGAGCAGGGCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: EDAANQIHPSPCCLGRGWLGPHQ*QGAGQR Trigger: GCGCTGCCCTGCTCCCTGCCACTGGTGGGGTCCGAG...CCACCCTCTCCCCAGGCAACAGGGAGAAGGGTGAATTTGATTCGCTGCATCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR-3UTR CCA 90 bp | CGAATCAAATTCACCCTTCTCCCTGTTGCCTGGGGAGAGGGTGGAGTCCGTCCTCTCGGACCCCACCAGTaGCAGGGAGCAGGGCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: RIKFTLLPVAWGEGGVRPLGPHQ*QGAGQR Trigger: GCGCTGCCCTGCTCCCTGCCACTGGTGGGGTCCGAG...AGGACGGACTCCACCCTCTCCCCAGGCAACAGGGAGAAGGGTGAATTTGATTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGGGAGCCCAGTGGCTAGGGTTGGCCTTTACTGGGCAGTGGAGGCCAGTAAAGGGACCCACAGTGTaGGTCCTAGAGGACACCCAG | + |
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Preference number: 2 (lower is better) Translates to: AGGAQWLGLAFTGQWRPVKGPTV*VLEDTQ Trigger: CTGGGTGTCCTCTAGGACCCACACTGTGGGTCCCTT...TACTGGCCTCCACTGCCCAGTAAAGGCCAACCCTAGCCACTGGGCTCCCCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCTCTGTCTATTCTCTGCTGTGCCACCTCCCTGTGAGGCAAGCCACTGTGACCGCCAAGTGGCTGTaGCCAAAGAGGCCAGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLSVYSLLCHLPVRQATVTAKWL*PKRPAW Trigger: CCACGCTGGCCTCTTTGGTCACAGCCACTTGGCGGT...CACAGTGGCTTGCCTCACAGGGAGGTGGCACAGCAGAGAATAGACAGAGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR-3UTR TCA 90 bp | CGAATCAAATTCACCCTTCTCCCTGTTGCCTGGGGAGAGGGTGGAGTCCGTCCTACCGCCAAGTGGCTGTaGCCAAAGAGGCCAGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: RIKFTLLPVAWGEGGVRPTAKWL*PKRPAW Trigger: CCACGCTGGCCTCTTTGGTCACAGCCACTTGGCGGT...AGGACGGACTCCACCCTCTCCCCAGGCAACAGGGAGAAGGGTGAATTTGATTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGTCAAGGACAGCAGCACTTCTAGGTCACAGTTTTCACGCTGGACCAGAGTACTCGGACCCCACCAGTaGCAGGGAGCAGGGCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: CVKDSSTSRSQFSRWTRVLGPHQ*QGAGQR Trigger: GCGCTGCCCTGCTCCCTGCCACTGGTGGGGTCCGAG...TACTCTGGTCCAGCGTGAAAACTGTGACCTAGAAGTGCTGCTGTCCTTGACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGGGAGCCCAGTGGCTAGGGTTGGCCTTTACTGGGCAGTGGAGGCCAGTATCCCTGGTCCCAACATaGGCTCTAAAGATTTGGATG | + |
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Preference number: 2 (lower is better) Translates to: AGGAQWLGLAFTGQWRPVSLVPT*ALKIWM Trigger: CATCCAAATCTTTAGAGCTCATGTTGGGACCAGGGA...TACTGGCCTCCACTGCCCAGTAAAGGCCAACCCTAGCCACTGGGCTCCCCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR-3UTR GCA 90 bp | AACCCAGGCCAACCTTTGAACCTGCAATCCTGTCTCACTCAGCAAAGAGCCGAGAGTACGCGTGTCCCTTaGCCCTCCACTCCTGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: NPGQPLNLQSCLTQQRAESTRVP*PSTPGS Trigger: GCTCCCAGGAGTGGAGGGGCAAGGGACACGCGTACT...CTCGGCTCTTTGCTGAGTGAGACAGGATTGCAGGTTCAAAGGTTGGCCTGGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR-3UTR CCA 90 bp | CACGGTAGAGAAAGTAGAGGATGCAGCGAATCAAATTCACCCTTCTCCCTGTTGCTCGGACCCCACCAGTaGCAGGGAGCAGGGCAGCGC | + |
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Preference number: 2 (lower is better) Translates to: HGRESRGCSESNSPFSLLLGPHQ*QGAGQR Trigger: GCGCTGCCCTGCTCCCTGCCACTGGTGGGGTCCGAG...CAACAGGGAGAAGGGTGAATTTGATTCGCTGCATCCTCTACTTTCTCTACCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
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| 3UTR-3UTR CCA 90 bp | AATTCAGCACCCACACAAGTGGTGGTCAAGGTCAGGAGTATTTCTGGGCTAGCCCTTCTCCCTGTTGCCTaGGGAGAGGGTGGAGTCCGT | + |
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Preference number: 2 (lower is better) Translates to: NSAPTQVVVKVRSISGLALLPVA*GEGGVR Trigger: ACGGACTCCACCCTCTCCCCAGGCAACAGGGAGAAG...GGCTAGCCCAGAAATACTCCTGACCTTGACCACCACTTGTGTGGGTGCTGAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
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| 3UTR CAA 90 bp | CAGCAGACAGGACAGTTAGGGAATGGATTTACAGGACTTTTCTGCTaGGGTCCAGCAGGGGGAGCCCAGTGGCTAGGGTTGGCCTTTACT | + |
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Preference number: 2 (lower is better) Translates to: QQTGQLGNGFTGLFC*GPAGGAQWLGLAFT Trigger: AGTAAAGGCCAACCCTAGCCACTGGGCTCCCCCTGCTGGACCCAAGCAGAAAAGTCCTGTAAATCCATTCCCTAACTGTCCTGTCTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTTTTGTGAAAGGGACCCACAGTGTGGGTCCTAGAGGACACCCAGCCCCTCCCAAACTGAACCACTaGGAATGTTGGAGACTTTGG | + |
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Preference number: 2 (lower is better) Translates to: WAFVKGTHSVGPRGHPAPPKLNH*ECWRLW Trigger: CCAAAGTCTCCAACATTCTCAGTGGTTCAGTTTGGG...AGGGGCTGGGTGTCCTCTAGGACCCACACTGTGGGTCCCTTTCACAAAAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCAGCAACAGCTCCCTAGGGTGGGGTGTCCCAGCACACTCTGAGGAGCTGGAATGTTGGAGACTTTaGGTCTGTGACCAAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: FLSNSSLGWGVPAHSEELECWRL*VCDQRS Trigger: AGACCTTTGGTCACAGACCCAAAGTCTCCAACATTC...CAGCTCCTCAGAGTGTGCTGGGACACCCCACCCTAGGGAGCTGTTGCTGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR CAA 90 bp | GCCTCCCCCTTTCTCTGCTTGGGTTGCTTCCCAGTGAAACTGTGGTaGATAACCAGAGCCTCTCCCGTCTCCTGCACATATTTACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: ASPFLCLGCFPVKLW*ITRASPVSCTYLPS Trigger: AGAGGGTAAATATGTGCAGGAGACGGGAGAGGCTCTGGTTATCAACCACAGTTTCACTGGGAAGCAACCCAAGCAGAGAAAGGGGGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTAAATACTATCAGGGAAGGAGTCGGGAGAAACCCGCATCCACTCCTCCATGTGCCACCTCCCTGTaGGGCAAGCCACTGTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: CLKYYQGRSREKPASTPPCATSL*GKPLCQ Trigger: TTGACACAGTGGCTTGCCTCACAGGGAGGTGGCACA...TGGAGGAGTGGATGCGGGTTTCTCCCGACTCCTTCCCTGATAGTATTTAAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
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| 3UTR-3UTR TCA 90 bp | AATAGAAGGTGCTGGGGTGGGCAGGGCAGGGCATTGTGGTTTATACAGACAGATGTAGGGGCTCCTTCCTaGAGTTTGAAGGGCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: NRRCWGGQGRALWFIQTDVGAPS*SLKGPK Trigger: CTTTGGGCCCTTCAAACTTCAGGAAGGAGCCCCTAC...ATCTGTCTGTATAAACCACAATGCCCTGCCCTGCCCACCCCAGCACCTTCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
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| 3UTR-3UTR GCA 90 bp | TTCAGCACCCACACAAGTGGTGGTCAAGGTCAGGAGTATTTCTGGGCTAGCCTTGGGTGGAGTCCGTCCTaGTCTCTGTCTATTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: FSTHTSGGQGQEYFWASLGWSPS*SLSILC Trigger: GCAGAGAATAGACAGAGAGCAGGACGGACTCCACCC...AAGGCTAGCCCAGAAATACTCCTGACCTTGACCACCACTTGTGTGGGTGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
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| 3UTR-3UTR TCA 90 bp | AGGATTCACTCCTGGTGCTCATCTGTCTTAAATACTATCAGGGAAGGAGTCGGGTGTGCCACCTCCCTGTaGGGCAAGCCACTGTGTCAA | + |
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Preference number: 2 (lower is better) Translates to: RIHSWCSSVLNTIREGVGCATSL*GKPLCQ Trigger: TTGACACAGTGGCTTGCCTCACAGGGAGGTGGCACA...CCCGACTCCTTCCCTGATAGTATTTAAGACAGATGAGCACCAGGAGTGAATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
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| 3UTR-3UTR TCA 90 bp | CAAAATCCAAGGCTCCAGGATTCACTCCTGGTGCTCATCTGTCTTAAATACTATACCGCCAAGTGGCTGTaGCCAAAGAGGCCAGCGTGG | + |
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Preference number: 2 (lower is better) Translates to: QNPRLQDSLLVLICLKYYTAKWL*PKRPAW Trigger: CCACGCTGGCCTCTTTGGTCACAGCCACTTGGCGGT...ATAGTATTTAAGACAGATGAGCACCAGGAGTGAATCCTGGAGCCTTGGATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
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| 3UTR CAA 90 bp | CCTGCAATCCTGTCTCACTCAGCAAAGAGCCGAGGTTCCAGGGATTaGCTCTCAGACCTGACTTCAGAGACATCTCTCTTTGAAACGTTA | + |
|
Preference number: 2 (lower is better) Translates to: PAILSHSAKSRGSRD*LSDLTSETSLFETL Trigger: TAACGTTTCAAAGAGAGATGTCTCTGAAGTCAGGTCTGAGAGCAAATCCCTGGAACCTCGGCTCTTTGCTGAGTGAGACAGGATTGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR-3UTR CCA 90 bp | AGGATTCACTCCTGGTGCTCATCTGTCTTAAATACTATCAGGGAAGGAGTCGGGCACCCACACAAGTGGTaGTCAAGGTCAGGAGTATTT | + |
|
Preference number: 2 (lower is better) Translates to: RIHSWCSSVLNTIREGVGHPHKW*SRSGVF Trigger: AAATACTCCTGACCTTGACCACCACTTGTGTGGGTG...CCCGACTCCTTCCCTGATAGTATTTAAGACAGATGAGCACCAGGAGTGAATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
||
| 3UTR-3UTR CCA 90 bp | TCACTCCTGGTGCTCATCTGTCTTAAATACTATCAGGGAAGGAGTCGGGAGAAAAGGGAGGCCTCTCTTTaGGGTTATGTAATTCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SLLVLICLKYYQGRSREKREASL*GYVIQH Trigger: GTGCTGAATTACATAACCCCAAAGAGAGGCCTCCCT...TTTCTCCCGACTCCTTCCCTGATAGTATTTAAGACAGATGAGCACCAGGAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
||
| 3UTR-3UTR GCA 90 bp | TGTAATTCAGCACCCACACAAGTGGTGGTCAAGGTCAGGAGTATTTCTGGGCTAAGAGAAAGTAGAGGATaGAGCGAATCAAATTCACCC | + |
|
Preference number: 2 (lower is better) Translates to: CNSAPTQVVVKVRSISGLRESRG*SESNSP Trigger: GGGTGAATTTGATTCGCTGCATCCTCTACTTTCTCT...TAGCCCAGAAATACTCCTGACCTTGACCACCACTTGTGTGGGTGCTGAATTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
||
| 3UTR GCA 72 bp | GTGGCTGTGACCAAAGAGGCCAGCGTGGCAAGCTCCTaGCTCGGACCCCACCAGTGGCAGGGAGCAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VAVTKEASVASS*LGPHQWQGAGQ Trigger: CTGCCCTGCTCCCTGCCACTGGTGGGGTCCGAGGCAGGAGCTTGCCACGCTGGCCTCTTTGGTCACAGCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | AGCAGGGGGAGCCCAGTGGCTAGGGTTGGCCTTTACTaGGCAGTGGAGGCCAGTATCGGGCAGCCTCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SRGSPVARVGLY*AVEASIGQPPC Trigger: GCAGGGAGGCTGCCCGATACTGGCCTCCACTGCCCAGTAAAGGCCAACCCTAGCCACTGGGCTCCCCCTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | TGTTCCTGCCAGCAGGGATCAACCGCCAAGTGGCTGTaGCCAAAGAGGCCAGCGTGGCAAGCTCCTGCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: CSCQQGSTAKWL*PKRPAWQAPAS Trigger: CGAGGCAGGAGCTTGCCACGCTGGCCTCTTTGGTCACAGCCACTTGGCGGTTGATCCCTGCTGGCAGGAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | CAACAGCTCCCTAGGGTGGGGTGTCCCAGCACACTCTaGGGAGCTGACCCAAAGGCTGCTGGACCACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QQLPRVGCPSTL*GADPKAAGPQQ Trigger: CTGCTGTGGTCCAGCAGCCTTTGGGTCAGCTCCTCAGAGTGTGCTGGGACACCCCACCCTAGGGAGCTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR GCA 72 bp | GCCTTCAGTAGCACCCCGGGGAGTACGCGTGTCCCTTaGCCCTCCACTCCTGGGAGCAAAGTTCCAGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: AFSSTPGSTRVP*PSTPGSKVPGS Trigger: ACTTCCTGGAACTTTGCTCCCAGGAGTGGAGGGGCAAGGGACACGCGTACTCCCCGGGGTGCTACTGAAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
||
| 3UTR GCA 72 bp | TACTGGGCAGTGGAGGCCAGTATCGGGCAGCCTCCCTaGCTCCCCCTTTCTCTGCTTGGGTTGCTTCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: YWAVEASIGQPP*LPLSLLGLLPS Trigger: ACTGGGAAGCAACCCAAGCAGAGAAAGGGGGAGGCAGGGAGGCTGCCCGATACTGGCCTCCACTGCCCAGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | GGACTTTTCTGCTTGGGTCCAGCAGGGGGAGCCCAGTaGCTAGGGTTGGCCTTTACTGGGCAGTGGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GLFCLGPAGGAQ*LGLAFTGQWRP Trigger: TGGCCTCCACTGCCCAGTAAAGGCCAACCCTAGCCACTGGGCTCCCCCTGCTGGACCCAAGCAGAAAAGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR GCA 72 bp | TCTCCCTGTTGCCTGGGGAGAGGGTGGAGTCCGTCCTaGTCTCTGTCTATTCTCTGCTGTGCCACCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SPCCLGRGWSPS*SLSILCCATSL Trigger: CAGGGAGGTGGCACAGCAGAGAATAGACAGAGAGCAGGACGGACTCCACCCTCTCCCCAGGCAACAGGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | GGAAGGGATGAAAAGGCCGAGGTAAAGGCAGGGCGCTaGGCCTACTTTCTCTTCAGCCCCTGCTCTGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GRDEKAEVKAGR*AYFLFSPCSAS Trigger: GGAGGCAGAGCAGGGGCTGAAGAGAAAGTAGGCTCAGCGCCCTGCCTTTACCTCGGCCTTTTCATCCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR GCA 72 bp | GTGGAGTCCGTCCTGCTCTCTGTCTATTCTCTGCTGTaGCACCTCCCTGTGAGGCAAGCCACTGTGTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VESVLLSVYSLL*HLPVRQATVSR Trigger: CCTTGACACAGTGGCTTGCCTCACAGGGAGGTGGCACAGCAGAGAATAGACAGAGAGCAGGACGGACTCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | GGTCCTAGAGGACACCCAGCCCCTGGGCTAACCAGTTaGCTTTCTCCCATTGGTTCCAGAGCCTGCACATTC | + |
|
Preference number: 3 (lower is better) Translates to: GPRGHPAPGLTS*LSPIGSRACTF Trigger: GAATGTGCAGGCTCTGGAACCAATGGGAGAAAGCCAACTGGTTAGCCCAGGGGCTGGGTGTCCTCTAGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR GCA 72 bp | CAGACCAGAAGAGAAGATGGCGCTGTCAGCAGTACCTaGCTCAGTGATGGGGGCTGGGGGACTAGAAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QTRREDGAVSST*LSDGGWGTRKS Trigger: AGACTTTCTAGTCCCCCAGCCCCCATCACTGAGGCAGGTACTGCTGACAGCGCCATCTTCTCTTCTGGTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR-3UTR CAA 90 bp | CGAGGTTCCAGGGATTTGCTCTCAGACCTGACTTCAGAGACATCTCTCTTTGAAGAGTACGCGTGTCCCTaGCCCCTCCACTCCTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RGSRDLLSDLTSETSLFEEYACP*PLHSWE Trigger: CTCCCAGGAGTGGAGGGGCAAGGGACACGCGTACTC...TTCAAAGAGAGATGTCTCTGAAGTCAGGTCTGAGAGCAAATCCCTGGAACCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | TGCTCTCTGTCTATTCTCTGCTGTGCCACCTCCCTGTaGGGCAAGCCACTGTGTCAAGGACAGCAGCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: CSLSILCCATSL*GKPLCQGQQHF Trigger: GAAGTGCTGCTGTCCTTGACACAGTGGCTTGCCTCACAGGGAGGTGGCACAGCAGAGAATAGACAGAGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | ATATTTACCCTCTCGGTTCTTCCTCCTAGCGGCTCCTaGAAGTGTGCAGCTGCCTTGCTTGGGACTCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IFTLSVLPPSGS*KCAAALLGTPW Trigger: CCAGGGAGTCCCAAGCAAGGCAGCTGCACACTTTCAGGAGCCGCTAGGAGGAAGAACCGAGAGGGTAAATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR GCA 72 bp | ACAGGACAGTTAGGGAATGGATTTACAGGACTTTTCTaGTTGGGTCCAGCAGGGGGAGCCCAGTGGCTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TGQLGNGFTGLF*LGPAGGAQWLG Trigger: CCCTAGCCACTGGGCTCCCCCTGCTGGACCCAAGCAGAAAAGTCCTGTAAATCCATTCCCTAACTGTCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | CAAATTCACCCTTCTCCCTGTTGCCTGGGGAGAGGGTaGAGTCCGTCCTGCTCTCTGTCTATTCTCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QIHPSPCCLGRG*SPSCSLSILCC Trigger: ACAGCAGAGAATAGACAGAGAGCAGGACGGACTCCACCCTCTCCCCAGGCAACAGGGAGAAGGGTGAATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | ATGCAGCGAATCAAATTCACCCTTCTCCCTGTTGCCTaGGGAGAGGGTGGAGTCCGTCCTGCTCTCTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: MQRIKFTLLPVA*GEGGVRPALCL Trigger: TAGACAGAGAGCAGGACGGACTCCACCCTCTCCCCAGGCAACAGGGAGAAGGGTGAATTTGATTCGCTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | CCACGGTCACGTGACTTCCGGAAACATTGCTCTCCCTaGATTGGCCCAGGCAACAGTCACACGGTAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: PRSRDFRKHCSP*IGPGNSHTVEK Trigger: TTTCTCTACCGTGTGACTGTTGCCTGGGCCAATCCAGGGAGAGCAATGTTTCCGGAAGTCACGTGACCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | TTGGCAATAAACTTCCTCAGCAACAGCTCCCTAGGGTaGGGTGTCCCAGCACACTCTGAGGAGCTGACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LAINFLSNSSLG*GVPAHSEELTQ Trigger: TTGGGTCAGCTCCTCAGAGTGTGCTGGGACACCCCACCCTAGGGAGCTGTTGCTGAGGAAGTTTATTGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | CCCTTTCTCTGCTTGGGTTGCTTCCCAGTGAAACTGTaGTTGATAACCAGAGCCTCTCCCGTCTCCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: PFLCLGCFPVKL*LITRASPVSCT Trigger: TGTGCAGGAGACGGGAGAGGCTCTGGTTATCAACCACAGTTTCACTGGGAAGCAACCCAAGCAGAGAAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | CTGAAGTTTGAAGGGCCCAAAGGTCCACTTCACTCGTaGGAACCATCTACCTGCATTCGTGTGAGGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LKFEGPKGPLHS*EPSTCIRVRQV Trigger: CACTTGCCTCACACGAATGCAGGTAGATGGTTCCCACGAGTGAAGTGGACCTTTGGGCCCTTCAAACTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | CTCCCATTGGTTCCAGAGCCTGCACATTCCCCTTGGTaGCTGTCACCTCCCAGTAGCCTACAACATAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LPLVPEPAHSPW*LSPPSSLQHKQ Trigger: TTGTTTATGTTGTAGGCTACTGGGAGGTGACAGTCACCAAGGGGAATGTGCAGGCTCTGGAACCAATGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR GCA 72 bp | AAACTGTGGTTGATAACCAGAGCCTCTCCCGTCTCCTaGACATATTTACCCTCTCGGTTCTTCCTCCTAGCG | + |
|
Preference number: 3 (lower is better) Translates to: KLWLITRASPVS*TYLPSRFFLLA Trigger: CGCTAGGAGGAAGAACCGAGAGGGTAAATATGTGCAGGAGACGGGAGAGGCTCTGGTTATCAACCACAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | AAGGACAGCAGCACTTCTAGGTCACAGTTTTCACGCTaGACCAGAGTATGTGATCATAGGAGGAGGAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KDSSTSRSQFSR*TRVCDHRRRRL Trigger: GAGCCTCCTCCTCCTATGATCACATACTCTGGTCCAGCGTGAAAACTGTGACCTAGAAGTGCTGCTGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| 3UTR-3UTR CAA 90 bp | TGCACTGTCTCCCTGAAAGATTCCTGTAGAGATCTTTCTGGGACTGTGGTGGTAGGGCAGGGCAGGGCATaGTGGTTTATACAGACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CTVSLKDSCRDLSGTVVVGQGRA*WFIQTD Trigger: ATCTGTCTGTATAAACCACAATGCCCTGCCCTGCCC...TACCACCACAGTCCCAGAAAGATCTCTACAGGAATCTTTCAGGGAGACAGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | GAGAACTCTTCCCTGGTCCTTAAACTAAAGCACTCGTaGTGGGGGCATCCTGTAAGAAAAGGTCTACAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ENSSLVLKLKHS*WGHPVRKGLQP Trigger: GGGCTGTAGACCTTTTCTTACAGGATGCCCCCATCACGAGTGCTTTAGTTTAAGGACCAGGGAAGAGTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | CCTGTCTCATCCCAGTCCCATTCTACAGAAGATAACTaGTTGTTCCTGCCCATGCCACACCAACAGACCACA | + |
|
Preference number: 3 (lower is better) Translates to: PVSSQSHSTEDN*LFLPMPHQQTT Trigger: TGTGGTCTGTTGGTGTGGCATGGGCAGGAACAATCAGTTATCTTCTGTAGAATGGGACTGGGATGAGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | AATAGAAGGTGCTGGGGTGGGCAGGGCAGGGCATTGTaGTTTATACAGACAGATGAGCTAAACAGAGTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: NRRCWGGQGRAL*FIQTDELNRVS Trigger: GCTAACTCTGTTTAGCTCATCTGTCTGTATAAACCACAATGCCCTGCCCTGCCCACCCCAGCACCTTCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | AACAGACCACAAGAGACATTCAAGAATAGAAGGTGCTaGGGTGGGCAGGGCAGGGCATTGTGGTTTATACAG | + |
|
Preference number: 3 (lower is better) Translates to: NRPQETFKNRRC*GGQGRALWFIQ Trigger: CTGTATAAACCACAATGCCCTGCCCTGCCCACCCCAGCACCTTCTATTCTTGAATGTCTCTTGTGGTCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | GAAGTGTCTGGGCTACAGCTCAGCAGTAGAGTAAGATaGAAGTCAAGTGGTATGGATCACGCCTGTAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: EVSGLQLSSRVR*KSSGMDHACNP Trigger: GGGATTACAGGCGTGATCCATACCACTTGACTTCCATCTTACTCTACTGCTGAGCTGTAGCCCAGACACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | CACTTCACTCGTGGGAACCATCTACCTGCATTCGTGTaGGGCAAGTGTATAAATAAGACCGTGGTTTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HFTRGNHLPAFV*GKCINKTVVSA Trigger: TGCAGAAACCACGGTCTTATTTATACACTTGCCTCACACGAATGCAGGTAGATGGTTCCCACGAGTGAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | CAAAGAGCCGAGGTTCCAGGGATTTGCTCTCAGACCTaGCTTCAGAGACATCTCTCTTTGAAACGTTACCAA | + |
|
Preference number: 3 (lower is better) Translates to: QRAEVPGICSQT*LQRHLSLKRYQ Trigger: TTGGTAACGTTTCAAAGAGAGATGTCTCTGAAGTCAGGTCTGAGAGCAAATCCCTGGAACCTCGGCTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR GCA 72 bp | TCCAACAAAATCCAAGGCTCCAGGATTCACTCCTGGTaGTCATCTGTCTTAAATACTATCAGGGAAGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SNKIQGSRIHSW*SSVLNTIREGV Trigger: GACTCCTTCCCTGATAGTATTTAAGACAGATGAGCACCAGGAGTGAATCCTGGAGCCTTGGATTTTGTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
||
| 3UTR TCA 72 bp | TTTGCTCTCAGACCTGACTTCAGAGACATCTCTCTTTaGAACGTTACCAAACTCATCAAGGTGGCACCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FALRPDFRDISL*NVTKLIKVAPE Trigger: TTCTGGTGCCACCTTGATGAGTTTGGTAACGTTTCAAAGAGAGATGTCTCTGAAGTCAGGTCTGAGAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR GCA 72 bp | CCCATTCTACAGAAGATAACTGATTGTTCCTGCCCATaGCACACCAACAGACCACAAGAGACATTCAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PILQKITDCSCP*HTNRPQETFKN Trigger: ATTCTTGAATGTCTCTTGTGGTCTGTTGGTGTGGCATGGGCAGGAACAATCAGTTATCTTCTGTAGAATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | ACATCTCTCTTTGAAACGTTACCAAACTCATCAAGGTaGCACCAGAATTTAAATCGTGGTCCCAAACTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TSLFETLPNSSR*HQNLNRGPKLN Trigger: GTTCAGTTTGGGACCACGATTTAAATTCTGGTGCCACCTTGATGAGTTTGGTAACGTTTCAAAGAGAGATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CCA 72 bp | GTTTGGTTTGGTTTTCTTTCCAGTTCTCAGGTCCTGTaGCTTAAGCAAGAAGGAGATTTAACATTACAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VWFGFLSSSQVL*LKQEGDLTLQG Trigger: ACCCTGTAATGTTAAATCTCCTTCTTGCTTAAGCCACAGGACCTGAGAACTGGAAAGAAAACCAAACCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| CDS-3UTR GCA 90 bp | AAGCTCCTGCCTCGGACCCCACCAGTGGCAGGGAGCAGGGCAGCGCTATGGTTCAGGTCCTGGGGGCTCTaGACCTCCCTCTGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLLPRTPPVAGSRAALWFRSWGL*TSLCLG Trigger: GCCCAAACAGAGGGAGGTGCAGAGCCCCCAGGACCT...GAACCATAGCGCTGCCCTGCTCCCTGCCACTGGTGGGGTCCGAGGCAGGAGCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR TCA 90 bp | CGGACCCCACCAGTGGCAGGGAGCAGGGCAGCGCTATGGTTCTCTTCGGCCGCTCTGTTAAAGTCGCTGTaGGGGTCTCCTGCGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTPPVAGSRAALWFSSAALLKSL*GSPASG Trigger: ACCTGACGCAGGAGACCCTCACAGCGACTTTAACAG...AGCGGCCGAAGAGAACCATAGCGCTGCCCTGCTCCCTGCCACTGGTGGGGTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR TCA 90 bp | AAGCTCCTGCCTCGGACCCCACCAGTGGCAGGGAGCAGGGCAGCGCTATGGTTCCTCTTTGAAGCGGCCTaGGTTGGAGACCTTGACATG | + |
|
Preference number: 4 (lower is better) Translates to: KLLPRTPPVAGSRAALWFLFEAA*VGDLDM Trigger: CATGTCAAGGTCTCCAACTCAGGCCGCTTCAAAGAG...GAACCATAGCGCTGCCCTGCTCCCTGCCACTGGTGGGGTCCGAGGCAGGAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CCA 90 bp | CACCTCCCTGTGAGGCAAGCCACTGTGTCAAGGACAGCAGCACTTCTAGGTCACTCCTGCGTCAGGTCCTaGGGGCTCTGCACCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLPVRQATVSRTAALLGHSCVRS*GLCTSL Trigger: GAGGGAGGTGCAGAGCCCCCAGGACCTGACGCAGGA...GTGACCTAGAAGTGCTGCTGTCCTTGACACAGTGGCTTGCCTCACAGGGAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CCA 90 bp | CGAATCAAATTCACCCTTCTCCCTGTTGCCTGGGGAGAGGGTGGAGTCCGTCCTTCCTGCGTCAGGTCCTaGGGGCTCTGCACCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RIKFTLLPVAWGEGGVRPSCVRS*GLCTSL Trigger: GAGGGAGGTGCAGAGCCCCCAGGACCTGACGCAGGA...AGGACGGACTCCACCCTCTCCCCAGGCAACAGGGAGAAGGGTGAATTTGATTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR TCA 90 bp | GCCAGCAGGGATCAACCGCCAAGTGGCTGTGACCAAAGAGGCCAGCGTGGCAAGCTGTTAAAGTCGCTGTaGGGGTCTCCTGCGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASRDQPPSGCDQRGQRGKLLKSL*GSPASG Trigger: ACCTGACGCAGGAGACCCTCACAGCGACTTTAACAG...CTTGCCACGCTGGCCTCTTTGGTCACAGCCACTTGGCGGTTGATCCCTGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTGTGAGGCAAGCCACTGTGTCAAGGACAGCAGCACTTCTAGGTCACAGAGGTCCTGGGGGCTCTaGACCTCCCTCTGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPCEASHCVKDSSTSRSQRSWGL*TSLCLG Trigger: GCCCAAACAGAGGGAGGTGCAGAGCCCCCAGGACCT...CTGTGACCTAGAAGTGCTGCTGTCCTTGACACAGTGGCTTGCCTCACAGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR GCA 90 bp | TGCCACCTCCCTGTGAGGCAAGCCACTGTGTCAAGGACAGCAGCACTTCTAGGTAGGTCCTGGGGGCTCTaGACCTCCCTCTGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CHLPVRQATVSRTAALLGRSWGL*TSLCLG Trigger: GCCCAAACAGAGGGAGGTGCAGAGCCCCCAGGACCT...ACCTAGAAGTGCTGCTGTCCTTGACACAGTGGCTTGCCTCACAGGGAGGTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR GCA 90 bp | GCTGGGGCACATAAATACAAACCTAAGAACCGGGTGTTCCTGCCAGCAGGGATCAGGTCCTGGGGGCTCTaGACCTCCCTCTGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGAHKYKPKNRVFLPAGIRSWGL*TSLCLG Trigger: GCCCAAACAGAGGGAGGTGCAGAGCCCCCAGGACCT...GATCCCTGCTGGCAGGAACACCCGGTTCTTAGGTTTGTATTTATGTGCCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CCA 90 bp | AGGATTCACTCCTGGTGCTCATCTGTCTTAAATACTATCAGGGAAGGAGTCGGGTCCTGCGTCAGGTCCTaGGGGCTCTGCACCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RIHSWCSSVLNTIREGVGSCVRS*GLCTSL Trigger: GAGGGAGGTGCAGAGCCCCCAGGACCTGACGCAGGA...CCCGACTCCTTCCCTGATAGTATTTAAGACAGATGAGCACCAGGAGTGAATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
||
| CDS-3UTR CCA 90 bp | CACCTCCCTGTGAGGCAAGCCACTGTGTCAAGGACAGCAGCACTTCTAGGTCACTGTCATCAAAGAGGTTaGGGTTCTCTGCCAACATGG | + |
|
Preference number: 4 (lower is better) Translates to: HLPVRQATVSRTAALLGHCHQRG*GSLPTW Trigger: CCATGTTGGCAGAGAACCCCAACCTCTTTGATGACA...GTGACCTAGAAGTGCTGCTGTCCTTGACACAGTGGCTTGCCTCACAGGGAGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR TCA 90 bp | GTGTCAAGGACAGCAGCACTTCTAGGTCACAGTTTTCACGCTGGACCAGAGTATCTGTTAAAGTCGCTGTaGGGGTCTCCTGCGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSRTAALLGHSFHAGPEYLLKSL*GSPASG Trigger: ACCTGACGCAGGAGACCCTCACAGCGACTTTAACAG...ATACTCTGGTCCAGCGTGAAAACTGTGACCTAGAAGTGCTGCTGTCCTTGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CCA 90 bp | AAAATCCAAGGCTCCAGGATTCACTCCTGGTGCTCATCTGTCTTAAATACTATCTCCTGCGTCAGGTCCTaGGGGCTCTGCACCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KIQGSRIHSWCSSVLNTISCVRS*GLCTSL Trigger: GAGGGAGGTGCAGAGCCCCCAGGACCTGACGCAGGA...GATAGTATTTAAGACAGATGAGCACCAGGAGTGAATCCTGGAGCCTTGGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
||
| CDS-3UTR TCA 90 bp | TGTGTCAAGGACAGCAGCACTTCTAGGTCACAGTTTTCACGCTGGACCAGAGTACTCTTTGAAGCGGCCTaGGTTGGAGACCTTGACATG | + |
|
Preference number: 4 (lower is better) Translates to: CVKDSSTSRSQFSRWTRVLFEAA*VGDLDM Trigger: CATGTCAAGGTCTCCAACTCAGGCCGCTTCAAAGAG...TACTCTGGTCCAGCGTGAAAACTGTGACCTAGAAGTGCTGCTGTCCTTGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| 3UTR CAA 72 bp | TCTTTCGCCTTCCTTTCTCCCTTGCCGTTAGAAGCCTaGTTTGATGATGGCGTTACTGACACAGCCCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SFAFLSPLPLEA*FDDGVTDTAQH Trigger: GTGTTGGGCTGTGTCAGTAACGCCATCATCAAACAAGGCTTCTAACGGCAAGGGAGAAAGGAAGGCGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CAA 72 bp | CTGTCTCACTCAGCAAAGAGCCGAGGTTCCAGGGATTaGCTCTCAGACCTGACTTCAGAGACATCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSHSAKSRGSRD*LSDLTSETSLF Trigger: AAAGAGAGATGTCTCTGAAGTCAGGTCTGAGAGCAAATCCCTGGAACCTCGGCTCTTTGCTGAGTGAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CAA 72 bp | TTTCTCTGCTTGGGTTGCTTCCCAGTGAAACTGTGGTaGATAACCAGAGCCTCTCCCGTCTCCTGCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: FLCLGCFPVKLW*ITRASPVSCTY Trigger: ATATGTGCAGGAGACGGGAGAGGCTCTGGTTATCAACCACAGTTTCACTGGGAAGCAACCCAAGCAGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CAA 72 bp | CCCCTGGCCTGGGTGAGGCACTTAACAAAGGTCTCCTaGTGTAGGTGTGTTTGTTTTGGCAATAAACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLAWVRHLTKVS*CRCVCFGNKLP Trigger: AGGAAGTTTATTGCCAAAACAAACACACCTACACAAGGAGACCTTTGTTAAGTGCCTCACCCAGGCCAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| 3UTR CAA 72 bp | GTATGTGGTATGGTAGCTAACAGCAAGGCTGTAAGATaGAGGGATGCCTCAACTCCTTTGGGGAGACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VCGMVANSKAVR*RDASTPLGRLY Trigger: ATAAAGTCTCCCCAAAGGAGTTGAGGCATCCCTCAATCTTACAGCCTTGCTGTTAGCTACCATACCACATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107636.4 |
||
| CDS-3UTR GCA 90 bp | TCACTCCTGGTGCTCATCTGTCTTAAATACTATCAGGGAAGGAGTCGGGAGAAATTGGAGACCTTGACATaGTTGCCTTTAGTGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLLVLICLKYYQGRSREKLETLT*LPLVFL Trigger: TAAGAACACTAAAGGCAAGCATGTCAAGGTCTCCAA...TTTCTCCCGACTCCTTCCCTGATAGTATTTAAGACAGATGAGCACCAGGAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | CGGACCCCACCAGTGGCAGGGAGCAGGGCAGCGCTATGGTTCTCTTCGGCCGCTTTGAAGCGGCCTGAGTaGGAGACCTTGACATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTPPVAGSRAALWFSSAALKRPE*ETLTCL Trigger: CAAGCATGTCAAGGTCTCCAACTCAGGCCGCTTCAA...AGCGGCCGAAGAGAACCATAGCGCTGCCCTGCTCCCTGCCACTGGTGGGGTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | CGGACCCCACCAGTGGCAGGGAGCAGGGCAGCGCTATGGTTCTCTTCGGCCGCTCTGTCATCAAAGAGGTaGGGGTTCTCTGCCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: RTPPVAGSRAALWFSSAALSSKR*GFSANM Trigger: CATGTTGGCAGAGAACCCCAACCTCTTTGATGACAG...AGCGGCCGAAGAGAACCATAGCGCTGCCCTGCTCCCTGCCACTGGTGGGGTCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | GAGGATGCAGCGAATCAAATTCACCCTTCTCCCTGTTGCCTGGGGAGAGGGTGGTGCACCTCCCTCTGTTaGGGCGTAGGTGTCCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EDAANQIHPSPCCLGRGWCTSLC*GVGVRD Trigger: ATCCCGGACACCTACGCCCAAACAGAGGGAGGTGCA...CCACCCTCTCCCCAGGCAACAGGGAGAAGGGTGAATTTGATTCGCTGCATCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS GCA 90 bp | CACAATCTTTTCCAGACGGCTGTTAAAGTCGCTGTGAGGGTCTCCTaGGTCAGGTCCTGGGGGCTCTGCACCTCCCTCTGTTTGGGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: HNLFQTAVKVAVRVS*VRSWGLCTSLCLGV Trigger: TACGCCCAAACAGAGGGAGGTGCAGAGCCCCCAGGACCTGACGCAGGAGACCCTCACAGCGACTTTAACAGCCGTCTGGAAAAGATTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | CTCTGTCTATTCTCTGCTGTGCCACCTCCCTGTGAGGCAAGCCACTGTGTCAAGTGCACCTCCCTCTGTTaGGGCGTAGGTGTCCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LCLFSAVPPPCEASHCVKCTSLC*GVGVRD Trigger: ATCCCGGACACCTACGCCCAAACAGAGGGAGGTGCA...CTTGACACAGTGGCTTGCCTCACAGGGAGGTGGCACAGCAGAGAATAGACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | AGGGATCAACCGCCAAGTGGCTGTGACCAAAGAGGCCAGCGTGGCAAGCTCCTGTTGAAGCGGCCTGAGTaGGAGACCTTGACATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RDQPPSGCDQRGQRGKLLLKRPE*ETLTCL Trigger: CAAGCATGTCAAGGTCTCCAACTCAGGCCGCTTCAA...CAGGAGCTTGCCACGCTGGCCTCTTTGGTCACAGCCACTTGGCGGTTGATCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | AGGGATCAACCGCCAAGTGGCTGTGACCAAAGAGGCCAGCGTGGCAAGCTCCTGCTGTCATCAAAGAGGTaGGGGTTCTCTGCCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: RDQPPSGCDQRGQRGKLLLSSKR*GFSANM Trigger: CATGTTGGCAGAGAACCCCAACCTCTTTGATGACAG...CAGGAGCTTGCCACGCTGGCCTCTTTGGTCACAGCCACTTGGCGGTTGATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | AATTCAGCACCCACACAAGTGGTGGTCAAGGTCAGGAGTATTTCTGGGCTAGCCTGCACCTCCCTCTGTTaGGGCGTAGGTGTCCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NSAPTQVVVKVRSISGLACTSLC*GVGVRD Trigger: ATCCCGGACACCTACGCCCAAACAGAGGGAGGTGCA...GGCTAGCCCAGAAATACTCCTGACCTTGACCACCACTTGTGTGGGTGCTGAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGACAGCAGCACTTCTAGGTCACAGTTTTCACGCTGGACCAGAGTATGTTGCACCTCCCTCTGTTaGGGCGTAGGTGTCCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VKDSSTSRSQFSRWTRVCCTSLC*GVGVRD Trigger: ATCCCGGACACCTACGCCCAAACAGAGGGAGGTGCA...ACATACTCTGGTCCAGCGTGAAAACTGTGACCTAGAAGTGCTGCTGTCCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | TCTGTCTATTCTCTGCTGTGCCACCTCCCTGTGAGGCAAGCCACTGTGTCAAGGTTGAAGCGGCCTGAGTaGGAGACCTTGACATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVYSLLCHLPVRQATVSRLKRPE*ETLTCL Trigger: CAAGCATGTCAAGGTCTCCAACTCAGGCCGCTTCAA...CCTTGACACAGTGGCTTGCCTCACAGGGAGGTGGCACAGCAGAGAATAGACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | GAGGGTGGAGTCCGTCCTGCTCTCTGTCTATTCTCTGCTGTGCCACCTCCCTGTGAGACCTTGACATGCTaGCCTTTAGTGTTCTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: EGGVRPALCLFSAVPPPCETLTC*PLVFLS Trigger: GGATAAGAACACTAAAGGCAAGCATGTCAAGGTCTC...ACAGGGAGGTGGCACAGCAGAGAATAGACAGAGAGCAGGACGGACTCCACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | GCACATAAATACAAACCTAAGAACCGGGTGTTCCTGCCAGCAGGGATCAACCGCCCTGAGTTGGAGACCTaGACATGCTTGCCTTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AHKYKPKNRVFLPAGINRPELET*TCLPLV Trigger: CACTAAAGGCAAGCATGTCAAGGTCTCCAACTCAGG...GCGGTTGATCCCTGCTGGCAGGAACACCCGGTTCTTAGGTTTGTATTTATGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | GTGAGGCAAGCCACTGTGTCAAGGACAGCAGCACTTCTAGGTCACAGTTTTCACCCTGAGTTGGAGACCTaGACATGCTTGCCTTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VRQATVSRTAALLGHSFHPELET*TCLPLV Trigger: CACTAAAGGCAAGCATGTCAAGGTCTCCAACTCAGG...GTGAAAACTGTGACCTAGAAGTGCTGCTGTCCTTGACACAGTGGCTTGCCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGACAGCAGCACTTCTAGGTCACAGTTTTCACGCTGGACCAGAGTATGTTTGAAGCGGCCTGAGTaGGAGACCTTGACATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VKDSSTSRSQFSRWTRVCLKRPE*ETLTCL Trigger: CAAGCATGTCAAGGTCTCCAACTCAGGCCGCTTCAA...ACATACTCTGGTCCAGCGTGAAAACTGTGACCTAGAAGTGCTGCTGTCCTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | GGGGCACATAAATACAAACCTAAGAACCGGGTGTTCCTGCCAGCAGGGATCAACCTGTCATCAAAGAGGTaGGGGTTCTCTGCCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: GAHKYKPKNRVFLPAGINLSSKR*GFSANM Trigger: CATGTTGGCAGAGAACCCCAACCTCTTTGATGACAG...GTTGATCCCTGCTGGCAGGAACACCCGGTTCTTAGGTTTGTATTTATGTGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | GTGTCAAGGACAGCAGCACTTCTAGGTCACAGTTTTCACGCTGGACCAGAGTATCCTGAGTTGGAGACCTaGACATGCTTGCCTTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSRTAALLGHSFHAGPEYPELET*TCLPLV Trigger: CACTAAAGGCAAGCATGTCAAGGTCTCCAACTCAGG...ATACTCTGGTCCAGCGTGAAAACTGTGACCTAGAAGTGCTGCTGTCCTTGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGACAGCAGCACTTCTAGGTCACAGTTTTCACGCTGGACCAGAGTATGTCTGTCATCAAAGAGGTaGGGGTTCTCTGCCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: VKDSSTSRSQFSRWTRVCLSSKR*GFSANM Trigger: CATGTTGGCAGAGAACCCCAACCTCTTTGATGACAG...ACATACTCTGGTCCAGCGTGAAAACTGTGACCTAGAAGTGCTGCTGTCCTTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS-3UTR CAA 90 bp | AAAATCCAAGGCTCCAGGATTCACTCCTGGTGCTCATCTGTCTTAAATACTATCCCTGAGTTGGAGACCTaGACATGCTTGCCTTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KIQGSRIHSWCSSVLNTIPELET*TCLPLV Trigger: CACTAAAGGCAAGCATGTCAAGGTCTCCAACTCAGG...GATAGTATTTAAGACAGATGAGCACCAGGAGTGAATCCTGGAGCCTTGGATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107636.4 |
||
| CDS GCA 72 bp | GCTGTGAGGGTCTCCTGCGTCAGGTCCTGGGGGCTCTaGACCTCCCTCTGTTTGGGCGTAGGTGTCCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AVRVSCVRSWGL*TSLCLGVGVRD Trigger: ATCCCGGACACCTACGCCCAAACAGAGGGAGGTGCAGAGCCCCCAGGACCTGACGCAGGAGACCCTCACAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS GCA 72 bp | TTCCAGACGGCTGTTAAAGTCGCTGTGAGGGTCTCCTaGGTCAGGTCCTGGGGGCTCTGCACCTCCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FQTAVKVAVRVS*VRSWGLCTSLC Trigger: ACAGAGGGAGGTGCAGAGCCCCCAGGACCTGACGCAGGAGACCCTCACAGCGACTTTAACAGCCGTCTGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS CAA 72 bp | TGCGTCAGGTCCTGGGGGCTCTGCACCTCCCTCTGTTaGGGCGTAGGTGTCCGGGATTTCGTAGAGCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: CVRSWGLCTSLC*GVGVRDFVEHF Trigger: AAAGTGCTCTACGAAATCCCGGACACCTACGCCCAAACAGAGGGAGGTGCAGAGCCCCCAGGACCTGACGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS GCA 72 bp | TTCTCTTTGAAGCGGCCTGAGTTGGAGACCTTGACATaGTTGCCTTTAGTGTTCTTATCCACAATCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FSLKRPELETLT*LPLVFLSTIFS Trigger: GGAAAAGATTGTGGATAAGAACACTAAAGGCAAGCATGTCAAGGTCTCCAACTCAGGCCGCTTCAAAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS CAA 72 bp | TCTTTGAAGCGGCCTGAGTTGGAGACCTTGACATGCTaGCCTTTAGTGTTCTTATCCACAATCTTTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLKRPELETLTC*PLVFLSTIFSR Trigger: TCTGGAAAAGATTGTGGATAAGAACACTAAAGGCAAGCATGTCAAGGTCTCCAACTCAGGCCGCTTCAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS CAA 90 bp | TTTTTCTTCTCTTTGAAGCGGCCTGAGTTGGAGACCTTGACATGCTaGCCTTTAGTGTTCTTATCCACAATCTTTTCCAGACGGCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: FFFSLKRPELETLTC*PLVFLSTIFSRRLL Trigger: TAACAGCCGTCTGGAAAAGATTGTGGATAAGAACACTAAAGGCAAGCATGTCAAGGTCTCCAACTCAGGCCGCTTCAAAGAGAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||
| CDS CAA 72 bp | TTTTTCTTCTCTTTGAAGCGGCCTGAGTTGGAGACCTaGACATGCTTGCCTTTAGTGTTCTTATCCACAATC | + |
|
Preference number: 6 (lower is better) Translates to: FFFSLKRPELET*TCLPLVFLSTI Trigger: GATTGTGGATAAGAACACTAAAGGCAAGCATGTCAAGGTCTCCAACTCAGGCCGCTTCAAAGAGAAGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054311.6 ENSMUST00000062172.6 ENSMUST00000107633.2 ENSMUST00000107636.4 |
||