Pregenerated sensors for PRR14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030822Ensembl transcript IDs: ENSMUST00000033095.10, ENSMUST00000106292.8, ENSMUST00000132819.3, ENSMUST00000133817.8, ENSMUST00000133938.8, ENSMUST00000206915.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCTCCGAGATGGCAATCTTCAATTCTAATTTCATGGGAGGTGAAGGGGGTGGAGACTGGGTGTAGGCATTaGCTGACCAGCTTTTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: PPRWQSSILISWEVKGVETGCRH*LTSFCH Trigger: GTGACAAAAGCTGGTCAGCCAATGCCTACACCCAGT...CTCCACCCCCTTCACCTCCCATGAAATTAGAATTGAAGATTGCCATCTCGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTCCGAGATGGCAATCTTCAATTCTAATTTCATGGGAGGTGAAGGGGGTGAAAGCTTTCAAGCTTTaGTCGGACGGAACGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: QPPRWQSSILISWEVKGVKAFKL*SDGTEE Trigger: CTCTTCCGTTCCGTCCGATCAAAGCTTGAAAGCTTT...CACCCCCTTCACCTCCCATGAAATTAGAATTGAAGATTGCCATCTCGGAGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTCCGAGATGGCAATCTTCAATTCTAATTTCATGGGAGGTGAAGGGGGTGGGTAGAGTAGACAGTTaGAATGGGGGTTCTAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: QPPRWQSSILISWEVKGVGRVDS*NGGSRS Trigger: TGACCTAGAACCCCCATTCCAACTGTCTACTCTACC...CACCCCCTTCACCTCCCATGAAATTAGAATTGAAGATTGCCATCTCGGAGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| 3UTR TCA 72 bp | AGGTGTGAAGAAGATATCAGCAAAGCTTTCAAGCTTTaGTCGGACGGAACGGAAGAGAGGGGCCAAGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: RCEEDISKAFKL*SDGTEERGQAP Trigger: TGGGGCTTGGCCCCTCTCTTCCGTTCCGTCCGATCAAAGCTTGAAAGCTTTGCTGATATCTTCTTCACACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| CDS-3UTR GCA 90 bp | CTTTCAAGCTTTGATCGGACGGAACGGAAGAGAGGGGCCAAGCCCCAGGGACTGGGTTCTCTGCACAAATaGAGTGGGTCAGGAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSSFDRTERKRGAKPQGLGSLHK*SGSGGL Trigger: CAGGCCTCCTGACCCACTGCATTTGTGCAGAGAACC...CAGTCCCTGGGGCTTGGCCCCTCTCTTCCGTTCCGTCCGATCAAAGCTTGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| CDS-3UTR CCA 90 bp | CTTTCAAGCTTTGATCGGACGGAACGGAAGAGAGGGGCCAAGCCCCAGGGACTGCTGGTTGTCTGCCACTaGCAATGTCTTCCAGTACCA | + |
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Preference number: 4 (lower is better) Translates to: LSSFDRTERKRGAKPQGLLVVCH*QCLPVP Trigger: TGGTACTGGAAGACATTGCCAGTGGCAGACAACCAG...CAGTCCCTGGGGCTTGGCCCCTCTCTTCCGTTCCGTCCGATCAAAGCTTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| CDS-3UTR TCA 90 bp | ATATCAGCAAAGCTTTCAAGCTTTGATCGGACGGAACGGAAGAGAGGGGCCAAGGCCAGATGCTGCCCTTaGTCTCATTCTCAAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ISAKLSSFDRTERKRGAKARCCP*SHSQGR Trigger: CCTGCCTTGAGAATGAGATCAAGGGCAGCATCTGGC...CTTGGCCCCTCTCTTCCGTTCCGTCCGATCAAAGCTTGAAAGCTTTGCTGATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| CDS-3UTR GCA 90 bp | CCTCCGAGATGGCAATCTTCAATTCTAATTTCATGGGAGGTGAAGGGGGTGGAGTCAGGAGGCCTGGCTTaGATGGACCACTTGACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPRWQSSILISWEVKGVESGGLA*MDHLTC Trigger: ACAGGTCAAGTGGTCCATGCAAGCCAGGCCTCCTGA...CTCCACCCCCTTCACCTCCCATGAAATTAGAATTGAAGATTGCCATCTCGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| CDS-3UTR GCA 90 bp | TGCTCAGCCTCCGAGATGGCAATCTTCAATTCTAATTTCATGGGAGGTGAAGGGCTTCTGAAGGTGCTCTaGTGGTTGTCTGCCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: CSASEMAIFNSNFMGGEGLLKVL*WLSATG Trigger: GCCAGTGGCAGACAACCAGCAGAGCACCTTCAGAAG...CCCTTCACCTCCCATGAAATTAGAATTGAAGATTGCCATCTCGGAGGCTGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| CDS-3UTR TCA 90 bp | TTAGGTGTGAAGAAGATATCAGCAAAGCTTTCAAGCTTTGATCGGACGGAACGGGGCCCTTCAGGCTTCTaGAGGTGCTCTGCTGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LGVKKISAKLSSFDRTERGPSGF*RCSAGC Trigger: ACAACCAGCAGAGCACCTTCAGAAGCCTGAAGGGCC...CCGTTCCGTCCGATCAAAGCTTGAAAGCTTTGCTGATATCTTCTTCACACCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| CDS-3UTR CCA 90 bp | GAGATGGCAATCTTCAATTCTAATTTCATGGGAGGTGAAGGGGGTGGAGGCTGTGACCACTTGACCTGTTaGGATGGTAAAGCAGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: EMAIFNSNFMGGEGGGGCDHLTC*DGKAGD Trigger: GTCACCTGCTTTACCATCCCAACAGGTCAAGTGGTC...ACAGCCTCCACCCCCTTCACCTCCCATGAAATTAGAATTGAAGATTGCCATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGGGCCTGGACTGGCTTaGCTGGGATGGGACAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKGPGLA*LGWDRR Trigger: CCTCCTGTCCCATCCCAGCCAAGCCAGTCCAGGCCC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACTCCGGGGCCTGGACTaGCTTGGCTGGGATGGGACA | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKLRGLD*LGWDGT Trigger: TGTCCCATCCCAGCCAAGCCAGTCCAGGCCCCGGAG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACTGGACTGGCTTGGCTaGGATGGGACAGGAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKLDWLG*DGTGGQ Trigger: CTGGCCTCCTGTCCCATCCCAGCCAAGCCAGTCCAG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATATGTCTCCGGGGCCTaGACTGGCTTGGCTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKYVSGA*TGLAGM Trigger: CATCCCAGCCAAGCCAGTCCAGGCCCCGGAGACATA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGGCCCTTCAGGCTTCTaGAGGTGCTTTGTGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKGPSGF*RCFVLG Trigger: TCCCAGCACAAAGCACCTTCAGAAGCCTGAAGGGCC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACTCCTTCCCCTTCGTTaGACCCAACCTGGGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKLLPLR*TQPGFC Trigger: GCAGAACCCAGGTTGGGTTCAACGAAGGGGAAGGAG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS-3UTR GCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACAGGTGCTAGGGAATTaGACTGAGTCCGCCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKQVLGN*TESATG Trigger: GCCAGTGGCGGACTCAGTGCAATTCCCTAGCACCTG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATCGTTGAACCCAACCTaGGTTCTGCCGGCTCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKSLNPT*VLPARR Trigger: TCTGCGAGCCGGCAGAACCCAGGTTGGGTTCAACGA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGCCAGATGCTGCCCTTaGTCTCATTCTCAAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKARCCP*SHSQGR Trigger: CCTGCCTTGAGAATGAGATCAAGGGCAGCATCTGGC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR GCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATCAGGAGGCCTGGCTTaGATGGACCACTTGACCTGT | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKSGGLA*MDHLTC Trigger: ACAGGTCAAGTGGTCCATGCAAGCCAGGCCTCCTGA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR GCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGGTTCTCTGCACAAATaGAGTGGGTCAGGAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKGSLHK*SGSGGL Trigger: CAGGCCTCCTGACCCACTGCATTTGTGCAGAGAACC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACTGACGGCACAGGCTTaGCTGTGTAAAAGGGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKLTAQA*LCKRAG Trigger: TCCAGCCCTTTTACACAGCCAAGCCTGTGCCGTCAG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGTCTTTTCGGGCTCCTaGCTTCCCATGATGCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKVFSGS*LPMMLE Trigger: CTCGAGCATCATGGGAAGCCAGGAGCCCGAAAAGAC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACTCCAGAGCAGGATCTaGTACTGGACTCTCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKLQSRI*YWTLWR Trigger: CCTCCAGAGAGTCCAGTACCAGATCCTGCTCTGGAG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGGCTCAGCTCTCGGGTaGAGGGACAAAGTAAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKGSALG*RDKVRV Trigger: AACTCTTACTTTGTCCCTTCACCCGAGAGCTGAGCC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAAGCAGGGGCATTGGCTaGGCAAGATGTAGTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKSRGIG*ARCSER Trigger: TCTCTCACTACATCTTGCTCAGCCAATGCCCCTGCT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACCTTCTTATTCAACCTaGTTGGTCGAGGCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKPSYST*LVEAAP Trigger: TGGGGCTGCCTCGACCAATCAGGTTGAATAAGAAGG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS-3UTR GCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATCCCTCAGCCTTTCTTaGAGTAGAGACCCCACATCC | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKSLSLS*SRDPTS Trigger: GGATGTGGGGTCTCTACTGCAAGAAAGGCTGAGGGA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATGTGAGTCAGTGGGCTaGGAGTGTCCTCTTTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKCESVG*ECPLCV Trigger: CACACAAAGAGGACACTCCCAGCCCACTGACTCACA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAAGCAGGATCTGGTACTaGACTCTCTGGAGGATCTGC | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKSRIWY*TLWRIC Trigger: GCAGATCCTCCAGAGAGTCCAGTACCAGATCCTGCT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATCGAGGCAGCCCCATTaGTGTAAGGTTTGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKSRQPH*CKVWLE Trigger: CTCCAACCAAACCTTACACCAATGGGGCTGCCTCGA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS-3UTR GCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGAGTCAAGGGTTCTCTaGACAAATGCAGTGGGTCAG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKESRVL*TNAVGQ Trigger: CTGACCCACTGCATTTGTGCAGAGAACCCTTGACTC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR GCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATTCATCAAAACCCTCTaGTGGTTGTCTGCCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKFIKTL*WLSATG Trigger: GCCAGTGGCAGACAACCAGCAGAGGGTTTTGATGAA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR GCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATCTGAAGGTGCTTTGTaGTGGGACAATGAGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKSEGAL*WDNEVG Trigger: CCCAACCTCATTGTCCCAGCACAAAGCACCTTCAGA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGACCACTTGACCTGTTaGGATGGTAAAGCAGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKDHLTC*DGKAGD Trigger: GTCACCTGCTTTACCATCCCAACAGGTCAAGTGGTC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACTGGTTGTCTGCCACTaGCAATGTCTTCCAGTACCA | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKLVVCH*QCLPVP Trigger: TGGTACTGGAAGACATTGCCAGTGGCAGACAACCAG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAACTGGGTGTAGGCATTaGCTGACCAGCTTTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKTGCRH*LTSFCH Trigger: GTGACAAAAGCTGGTCAGCCAATGCCTACACCCAGT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAAGGGGGTGGAGGCTGTaGTGTTTTGTTAGGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKRGWRL*CFVRCE Trigger: TTCACACCTAACAAAACACCACAGCCTCCACCCCCT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACTTATTCAACCTGATTaGTCGAGGCAGCCCCATTGG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKLIQPD*SRQPHW Trigger: CCAATGGGGCTGCCTCGACCAATCAGGTTGAATAAG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATTTGTGCTGGGACAATaGGGTTGGGCTGATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKFVLGQ*GWADLH Trigger: ATGAAGATCAGCCCAACCTCATTGTCCCAGCACAAA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAAAAGCTTTCAAGCTTTaGTCGGACGGAACGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKKAFKL*SDGTEE Trigger: CTCTTCCGTTCCGTCCGATCAAAGCTTGAAAGCTTT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGGTAGAGTAGACAGTTaGAATGGGGGTTCTAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKGRVDS*NGGSRS Trigger: TGACCTAGAACCCCCATTCCAACTGTCTACTCTACC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACCTTCCCCATGGTCTTaGTCTCTGGATCAGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKPSPWS*SLDQKT Trigger: TGTTTTCTGATCCAGAGACCAAGACCATGGGGAAGG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACATTGGTGTAAGGTTTaGTTGGAGACGGACAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKHWCKV*LETDRC Trigger: ACACCTGTCCGTCTCCAACCAAACCTTACACCAATG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAACAATGAGGTTGGGCTaGTCTTCATCAAAACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKTMRLG*SSSKPS Trigger: AGAGGGTTTTGATGAAGATCAGCCCAACCTCATTGT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATCAATTCTAATTTCATaGGAGGTGAAGGGGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKSILIS*EVKGVE Trigger: CTCCACCCCCTTCACCTCCCATGAAATTAGAATTGA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACATGGTCTTGGTCTCTaGATCAGAAAACACCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKHGLGL*IRKHLV Trigger: GACAAGGTGTTTTCTGATCCAGAGACCAAGACCATG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATCTCAAAGGTCCTTCTaGTTGTGGGTGATTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKSQRSF*LWVIGS Trigger: ACTACCAATCACCCACAACCAGAAGGACCTTTGAGA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACCTTCTGGTTGTGGGTaGTTGGTAGTTCTTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKPSGCG*LVVLIC Trigger: ACAAATAAGAACTACCAATCACCCACAACCAGAAGG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS-3UTR TCA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGCTTCTGGTTGTGGGTaGTTGGTAGTTCTTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNTIDSEISPLPKGRMDKASGCG*LVVLIC Trigger: ACAAATAAGAACTACCAATCACCCACAACCAGAAGC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206915.2 |
||
| CDS CCA 90 bp | CGGGCCATCTCCCCACAACCCACAGTATGTCTCCGGGGCCTGGACTaGCTTGGCTGGGATGGGACAGGAGGCCAGCTACCTGGGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAISPQPTVCLRGLD*LGWDGTGGQLPGSG Trigger: CCCTGACCCAGGTAGCTGGCCTCCTGTCCCATCCCAGCCAAGCCAGTCCAGGCCCCGGAGACATACTGTGGGTTGTGGGGAGATGGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS CCA 90 bp | GGGTCCGGGCCATCTCCCCACAACCCACAGTATGTCTCCGGGGCCTaGACTGGCTTGGCTGGGATGGGACAGGAGGCCAGCTACCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSGPSPHNPQYVSGA*TGLAGMGQEASYLG Trigger: ACCCAGGTAGCTGGCCTCCTGTCCCATCCCAGCCAAGCCAGTCCAGGCCCCGGAGACATACTGTGGGTTGTGGGGAGATGGCCCGGACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS CCA 90 bp | TCCAAGAGGGAAGACCTCTTTCCGGAGACAGGGTCGAGGAGGTGGTaGGGTCCGGGCCATCTCCCCACAACCCACAGTATGTCTCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SKREDLFPETGSRRW*GPGHLPTTHSMSPG Trigger: CCCCGGAGACATACTGTGGGTTGTGGGGAGATGGCCCGGACCCCACCACCTCCTCGACCCTGTCTCCGGAAAGAGGTCTTCCCTCTTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS CCA 90 bp | TCCTCCAAGAGGGAAGACCTCTTTCCGGAGACAGGGTCGAGGAGGTaGTGGGGTCCGGGCCATCTCCCCACAACCCACAGTATGTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSKREDLFPETGSRR*WGPGHLPTTHSMSP Trigger: CGGAGACATACTGTGGGTTGTGGGGAGATGGCCCGGACCCCACCACCTCCTCGACCCTGTCTCCGGAAAGAGGTCTTCCCTCTTGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS GCA 90 bp | CACAGGCTCAGCTCTCGGGTGAAGGGACAAAGTAAGAGTTGGGCGTaGTTCCAAGTCCAGACCCCTTCTGTGGCAGTGCTTCCCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HRLSSRVKGQSKSWA*FQVQTPSVAVLPRA Trigger: GGCCCGGGGAAGCACTGCCACAGAAGGGGTCTGGACTTGGAAGCACGCCCAACTCTTACTTTGTCCCTTCACCCGAGAGCTGAGCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS TCA 90 bp | CAGGTTGGGAGTAAGGGTTCTGCTTGCTGCGGTGCGGACCCCTCGTaGTGGTCGCCGGGATCGAGGAAGGCTACTGTCCCGAAATTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: QVGSKGSACCGADPS*WSPGSRKATVPKFY Trigger: GTAGAATTTCGGGACAGTAGCCTTCCTCGATCCCGGCGACCATCACGAGGGGTCCGCACCGCAGCAAGCAGAACCCTTACTCCCAACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS GCA 90 bp | GTAAGAGTTGGGCGTGCTTCCAAGTCCAGACCCCTTCTGTGGCAGTaGTTCCCCGGGCCCTTCAGGCTTCTGAAGGTGCTTTGTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VRVGRASKSRPLLWQ*FPGPFRLLKVLCAG Trigger: CCCAGCACAAAGCACCTTCAGAAGCCTGAAGGGCCCGGGGAAGCACTGCCACAGAAGGGGTCTGGACTTGGAAGCACGCCCAACTCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS GCA 90 bp | CTTCCCCGGGCCCTTCAGGCTTCTGAAGGTGCTCTGCTGGTTGTCTaGCACTGGCAATGTCTTCCAGTACCACCACTAGGGTGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPRALQASEGALLVV*HWQCLPVPPLGWAV Trigger: CACAGCCCACCCTAGTGGTGGTACTGGAAGACATTGCCAGTGGCAGACAACCAGCAGAGCACCTTCAGAAGCCTGAAGGGCCCGGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
||
| CDS GCA 90 bp | GTAAGAGTTGGGCGTGCTTCCAAGTCCAGACCCCTTCTGTGGCAGTaGTTCCCCGGGCCCTTCAGGCTTCTGAAGGTGCTCTGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRVGRASKSRPLLWQ*FPGPFRLLKVLCWL Trigger: CAACCAGCAGAGCACCTTCAGAAGCCTGAAGGGCCCGGGGAAGCACTGCCACAGAAGGGGTCTGGACTTGGAAGCACGCCCAACTCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
||
| CDS CCA 90 bp | CGAGGACTGGCGGGCTCGAGTCAAGGGTTCTCTGCACAAATGCAGTaGGTCAGGAGGCCTGGCTTGCATGGACCACTTGACCTGTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGLAGSSQGFSAQMQ*VRRPGLHGPLDLLG Trigger: TCCCAACAGGTCAAGTGGTCCATGCAAGCCAGGCCTCCTGACCCACTGCATTTGTGCAGAGAACCCTTGACTCGAGCCCGCCAGTCCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 ENSMUST00000133817.8 |
||
| CDS CCA 90 bp | CGGGCCCTTCAGGCTTCTGAAGGTGCTCTGCTGGTTGTCTGCCACTaGCAATGTCTTCCAGTACCACCACTAGGGTGGGCTGTGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: RALQASEGALLVVCH*QCLPVPPLGWAVGP Trigger: AGGTCCCACAGCCCACCCTAGTGGTGGTACTGGAAGACATTGCCAGTGGCAGACAACCAGCAGAGCACCTTCAGAAGCCTGAAGGGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
||
| CDS TCA 90 bp | GGTCTTTTCGGGCTCCTGGCTTCCCATGATGCTCGAGATAGAGGCTaGCGGCACAGGCTTGGCTGTGTAAAAGGGCTGGAGTTCCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLFGLLASHDARDRG*RHRLGCVKGLEFPG Trigger: GCCTGGGAACTCCAGCCCTTTTACACAGCCAAGCCTGTGCCGTCAGCCTCTATCTCGAGCATCATGGGAAGCCAGGAGCCCGAAAAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000133938.8 |
||
| CDS GCA 90 bp | GTCTCCTCCTCCAGGAGCAAGGCATCTAGCTCCCTCAGCCTTTCTTaGAGTAGAGACCCCACATCCTGGCTGGGTGCCAGGTTGGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSSSRSKASSSLSLS*SRDPTSWLGARLGV Trigger: TACTCCCAACCTGGCACCCAGCCAGGATGTGGGGTCTCTACTGCAAGAAAGGCTGAGGGAGCTAGATGCCTTGCTCCTGGAGGAGGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS CCA 90 bp | GGGCCAGATGCTGCCCTTGATCTCATTCTCAAGGCAGGCGAGGACTaGCGGGCTCGAGTCAAGGGTTCTCTGCACAAATGCAGTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPDAALDLILKAGED*RARVKGSLHKCSGS Trigger: TGACCCACTGCATTTGTGCAGAGAACCCTTGACTCGAGCCCGCCAGTCCTCGCCTGCCTTGAGAATGAGATCAAGGGCAGCATCTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 |
||
| CDS CCA 90 bp | GCATCTAGCTCCCTCAGCCTTTCTTGCAGTAGAGACCCCACATCCTaGCTGGGTGCCAGGTTGGGAGTAAGGGTTCTGCTTGCTGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSSLSLSCSRDPTS*LGARLGVRVLLAAV Trigger: CACCGCAGCAAGCAGAACCCTTACTCCCAACCTGGCACCCAGCCAGGATGTGGGGTCTCTACTGCAAGAAAGGCTGAGGGAGCTAGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS TCA 90 bp | CTTCGTCCCAGAGATGACTTAGAGACAGGTGCTAGGGAATTGCACTaGGTCCGCCACTGGCGGATAGGGGGCCTGGGGCTGACAGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRPRDDLETGARELH*VRHWRIGGLGLTDV Trigger: TACATCTGTCAGCCCCAGGCCCCCTATCCGCCAGTGGCGGACTCAGTGCAATTCCCTAGCACCTGTCTCTAAGTCATCTCTGGGACGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS TCA 90 bp | CCTGGGTTCTGCCGGCTCGCAGAAGAAGGAAGCAGGGGCATTGGCTaGGCAAGATGTAGTGAGAGAAGGAGAGACTCCCACTCCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGFCRLAEEGSRGIG*ARCSERRRDSHSSK Trigger: CTTGGAGGAGTGGGAGTCTCTCCTTCTCTCACTACATCTTGCTCAGCCAATGCCCCTGCTTCCTTCTTCTGCGAGCCGGCAGAACCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS CCA 90 bp | GGTTGGGCTGATCTTCATCAAAACCCTCTGCTGGTTGTCTGCCACTaGCAATGTCTTCCAGTACCACCACTAGGGTGGGCTGTGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: GWADLHQNPLLVVCH*QCLPVPPLGWAVGP Trigger: AGGTCCCACAGCCCACCCTAGTGGTGGTACTGGAAGACATTGCCAGTGGCAGACAACCAGCAGAGGGTTTTGATGAAGATCAGCCCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS CCA 90 bp | TTTTGTCACAGGCTCAGCTCTCGGGTGAAGGGACAAAGTAAGAGTTaGGCGTGCTTCCAAGTCCAGACCCCTTCTGTGGCAGTGCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FCHRLSSRVKGQSKS*ACFQVQTPSVAVLP Trigger: GGGAAGCACTGCCACAGAAGGGGTCTGGACTTGGAAGCACGCCCAACTCTTACTTTGTCCCTTCACCCGAGAGCTGAGCCTGTGACAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS-3UTR CAA 90 bp | GCTCAGCCTCCGAGATGGCAATCTTCAATTCTAATTTCATGGGAGGTGAAGGGGGTCAGGAGGCCTGGCTaGCATGGACCACTTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQPPRWQSSILISWEVKGVRRPG*HGPLDL Trigger: CAGGTCAAGTGGTCCATGCAAGCCAGGCCTCCTGAC...CCCCTTCACCTCCCATGAAATTAGAATTGAAGATTGCCATCTCGGAGGCTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
||
| CDS TCA 90 bp | TTCAGGCTTCTGAAGGTGCTTTGTGCTGGGACAATGAGGTTGGGCTaGTCTTCATCAAAACCCTCTGCTGGTTGTCTGCCACTGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FRLLKVLCAGTMRLG*SSSKPSAGCLPLAM Trigger: CATTGCCAGTGGCAGACAACCAGCAGAGGGTTTTGATGAAGATCAGCCCAACCTCATTGTCCCAGCACAAAGCACCTTCAGAAGCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS CCA 90 bp | TTCAACCTGATTGGTCGAGGCAGCCCCATTGGTGTAAGGTTTGGTTaGAGACGGACAGGTGTCCTCCGTATTCTGAATCTAGAAACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FNLIGRGSPIGVRFG*RRTGVLRILNLETF Trigger: GAAGGTTTCTAGATTCAGAATACGGAGGACACCTGTCCGTCTCCAACCAAACCTTACACCAATGGGGCTGCCTCGACCAATCAGGTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS CCA 90 bp | AGTGAACTCCTTCTTATTCAACCTGATTGGTCGAGGCAGCCCCATTaGTGTAAGGTTTGGTTGGAGACGGACAGGTGTCCTCCGTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SELLLIQPDWSRQPH*CKVWLETDRCPPYS Trigger: AGAATACGGAGGACACCTGTCCGTCTCCAACCAAACCTTACACCAATGGGGCTGCCTCGACCAATCAGGTTGAATAAGAAGGAGTTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS-3UTR CAA 90 bp | GCTCAGCCTCCGAGATGGCAATCTTCAATTCTAATTTCATGGGAGGTGAAGGGGGCTTGCATGGACCACTaGACCTGTTGGGATGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: AQPPRWQSSILISWEVKGACMDH*TCWDGK Trigger: TTTACCATCCCAACAGGTCAAGTGGTCCATGCAAGC...CCCCTTCACCTCCCATGAAATTAGAATTGAAGATTGCCATCTCGGAGGCTGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGGGGCCTGGACTGGCTaGGCTGGGATGGGACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKGAWTG*AGMGQE Trigger: CTCCTGTCCCATCCCAGCCAAGCCAGTCCAGGCCCC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS CCA 90 bp | CTTATTCAACCTGATTGGTCGAGGCAGCCCCATTGGTGTAAGGTTTaGTTGGAGACGGACAGGTGTCCTCCGTATTCTGAATCTAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LIQPDWSRQPHWCKV*LETDRCPPYSESRN Trigger: GTTTCTAGATTCAGAATACGGAGGACACCTGTCCGTCTCCAACCAAACCTTACACCAATGGGGCTGCCTCGACCAATCAGGTTGAATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGTCAGGAGGCCTGGCTaGCATGGACCACTTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKVRRPG*HGPLDL Trigger: CAGGTCAAGTGGTCCATGCAAGCCAGGCCTCCTGAC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATGGCTGGGTGCCAGGTaGGGAGTAAGGGTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKWLGAR*GVRVLL Trigger: AAGCAGAACCCTTACTCCCAACCTGGCACCCAGCCA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAATTGGCTGACCAGCTTTaGTCACAGGCTCAGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKLADQL*SQAQLS Trigger: CGAGAGCTGAGCCTGTGACAAAAGCTGGTCAGCCAA...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAACTCCTTCCCCTTCGTaGAACCCAACCTGGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKTPSPS*NPTWVL Trigger: CAGAACCCAGGTTGGGTTCAACGAAGGGGAAGGAGT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAAAGGAAGCAGGGGCATaGGCTGAGCAAGATGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKKEAGA*AEQDVV Trigger: CACTACATCTTGCTCAGCCAATGCCCCTGCTTCCTT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGCTTGCATGGACCACTaGACCTGTTGGGATGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKACMDH*TCWDGK Trigger: TTTACCATCCCAACAGGTCAAGTGGTCCATGCAAGC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAGCTTCTGAAGGTGCTTaGTGCTGGGACAATGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKASEGA*CWDNEV Trigger: AACCTCATTGTCCCAGCACAAAGCACCTTCAGAAGC...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAACCTTCCCCATGGTCTaGGTCTCTGGATCAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKTFPMV*VSGSEN Trigger: GTTTTCTGATCCAGAGACCAAGACCATGGGGAAGGT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
||
| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAAAAATCAGAGTTCCATaGCGCTCCCGTGGTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKKIRVP*RSRGSS Trigger: TGAGGAACCACGGGAGCGCAATGGAACTCTGATTTT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACAAAGCTTTCAAGCTTaGATCGGACGGAACGGAAGA | + |
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Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKQSFQA*IGRNGR Trigger: TCTTCCGTTCCGTCCGATCAAAGCTTGAAAGCTTTG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAACAAAGGTCCTTCTGGTaGTGGGTGATTGGTAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKQRSFW*WVIGSS Trigger: AGAACTACCAATCACCCACAACCAGAAGGACCTTTG...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS-3UTR CAA 90 bp | AAAAATACAATTGATTCAGAGATTTCTCCCCTACCTAAAGGACGGATGGACAAAAAAACACCTTGTCTTTaGAGGCTCTTAACTCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: KNTIDSEISPLPKGRMDKKTPCL*RLLTPS Trigger: GGAAGGAGTTAAGAGCCTCAAAAGACAAGGTGTTTT...TTTGTCCATCCGTCCTTTAGGTAGGGGAGAAATCTCTGAATCAATTGTATTTTT 39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS CCA 72 bp | CCATCTCCCCACAACCCACAGTATGTCTCCGGGGCCTaGACTGGCTTGGCTGGGATGGGACAGGAGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PSPHNPQYVSGA*TGLAGMGQEAS Trigger: GCTGGCCTCCTGTCCCATCCCAGCCAAGCCAGTCCAGGCCCCGGAGACATACTGTGGGTTGTGGGGAGATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS TCA 72 bp | AGTAAGGGTTCTGCTTGCTGCGGTGCGGACCCCTCGTaGTGGTCGCCGGGATCGAGGAAGGCTACTGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: SKGSACCGADPS*WSPGSRKATVP Trigger: CGGGACAGTAGCCTTCCTCGATCCCGGCGACCATCACGAGGGGTCCGCACCGCAGCAAGCAGAACCCTTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS CCA 72 bp | TCCCCACAACCCACAGTATGTCTCCGGGGCCTGGACTaGCTTGGCTGGGATGGGACAGGAGGCCAGCTACCT | + |
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Preference number: 6 (lower is better) Translates to: SPQPTVCLRGLD*LGWDGTGGQLP Trigger: AGGTAGCTGGCCTCCTGTCCCATCCCAGCCAAGCCAGTCCAGGCCCCGGAGACATACTGTGGGTTGTGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS CCA 72 bp | AGGGAAGACCTCTTTCCGGAGACAGGGTCGAGGAGGTaGTGGGGTCCGGGCCATCTCCCCACAACCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: REDLFPETGSRR*WGPGHLPTTHS Trigger: ACTGTGGGTTGTGGGGAGATGGCCCGGACCCCACCACCTCCTCGACCCTGTCTCCGGAAAGAGGTCTTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS CAA 72 bp | CACAACCCACAGTATGTCTCCGGGGCCTGGACTGGCTaGGCTGGGATGGGACAGGAGGCCAGCTACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: HNPQYVSGAWTG*AGMGQEASYLG Trigger: ACCCAGGTAGCTGGCCTCCTGTCCCATCCCAGCCAAGCCAGTCCAGGCCCCGGAGACATACTGTGGGTTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS GCA 72 bp | CAGGCGAGGACTGGCGGGCTCGAGTCAAGGGTTCTCTaGACAAATGCAGTGGGTCAGGAGGCCTGGCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: QARTGGLESRVL*TNAVGQEAWLA Trigger: TGCAAGCCAGGCCTCCTGACCCACTGCATTTGTGCAGAGAACCCTTGACTCGAGCCCGCCAGTCCTCGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 |
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| CDS GCA 72 bp | GGGCGTGCTTCCAAGTCCAGACCCCTTCTGTGGCAGTaGTTCCCCGGGCCCTTCAGGCTTCTGAAGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GRASKSRPLLWQ*FPGPFRLLKVL Trigger: AAGCACCTTCAGAAGCCTGAAGGGCCCGGGGAAGCACTGCCACAGAAGGGGTCTGGACTTGGAAGCACGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS CCA 72 bp | GAAGACCTCTTTCCGGAGACAGGGTCGAGGAGGTGGTaGGGTCCGGGCCATCTCCCCACAACCCACAGTATG | + |
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Preference number: 6 (lower is better) Translates to: EDLFPETGSRRW*GPGHLPTTHSM Trigger: CATACTGTGGGTTGTGGGGAGATGGCCCGGACCCCACCACCTCCTCGACCCTGTCTCCGGAAAGAGGTCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS GCA 72 bp | GACTGGCGGGCTCGAGTCAAGGGTTCTCTGCACAAATaGAGTGGGTCAGGAGGCCTGGCTTGCATGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: DWRARVKGSLHK*SGSGGLACMDH Trigger: GTGGTCCATGCAAGCCAGGCCTCCTGACCCACTGCATTTGTGCAGAGAACCCTTGACTCGAGCCCGCCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 ENSMUST00000133817.8 |
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| CDS CCA 72 bp | TCCCCAAAGGCTGCAGCCTCGGTCTTTTCGGGCTCCTaGCTTCCCATGATGCTCGAGATAGAGGCTGACGGC | + |
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Preference number: 6 (lower is better) Translates to: SPKAAASVFSGS*LPMMLEIEADG Trigger: GCCGTCAGCCTCTATCTCGAGCATCATGGGAAGCCAGGAGCCCGAAAAGACCGAGGCTGCAGCCTTTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000133938.8 |
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| CDS CAA 72 bp | CCACTAGGGTGGGCTGTGGGACCTGGTCTGTCTTTTTaGAGGGGCTCTCCTCTGGGCCAGATGCTGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PLGWAVGPGLSF*RGSPLGQMLPL Trigger: CAAGGGCAGCATCTGGCCCAGAGGAGAGCCCCTCAAAAAAGACAGACCAGGTCCCACAGCCCACCCTAGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 |
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| CDS TCA 72 bp | GGGCTCCTGGCTTCCCATGATGCTCGAGATAGAGGCTaGCGGCACAGGCTTGGCTGTGTAAAAGGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GLLASHDARDRG*RHRLGCVKGLE Trigger: CTCCAGCCCTTTTACACAGCCAAGCCTGTGCCGTCAGCCTCTATCTCGAGCATCATGGGAAGCCAGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000133938.8 |
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| CDS TCA 72 bp | AGAGATGACTTAGAGACAGGTGCTAGGGAATTGCACTaGGTCCGCCACTGGCGGATAGGGGGCCTGGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RDDLETGARELH*VRHWRIGGLGL Trigger: CAGCCCCAGGCCCCCTATCCGCCAGTGGCGGACTCAGTGCAATTCCCTAGCACCTGTCTCTAAGTCATCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS CCA 72 bp | GCGGGCTCGAGTCAAGGGTTCTCTGCACAAATGCAGTaGGTCAGGAGGCCTGGCTTGCATGGACCACTTGAC | + |
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Preference number: 6 (lower is better) Translates to: AGSSQGFSAQMQ*VRRPGLHGPLD Trigger: GTCAAGTGGTCCATGCAAGCCAGGCCTCCTGACCCACTGCATTTGTGCAGAGAACCCTTGACTCGAGCCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 ENSMUST00000133817.8 |
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| CDS CAA 90 bp | CCAGTACCACCACTAGGGTGGGCTGTGGGACCTGGTCTGTCTTTTTaGAGGGGCTCTCCTCTGGGCCAGATGCTGCCCTTGATCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: PVPPLGWAVGPGLSF*RGSPLGQMLPLISF Trigger: GAATGAGATCAAGGGCAGCATCTGGCCCAGAGGAGAGCCCCTCAAAAAAGACAGACCAGGTCCCACAGCCCACCCTAGTGGTGGTACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 |
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| CDS TCA 72 bp | GCAGTGGGTCAGGAGGCCTGGCTTGCATGGACCACTTaGCCTGTTGGGATGGTAAAGCAGGTGACTGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: AVGQEAWLAWTT*PVGMVKQVTVC Trigger: GCACACAGTCACCTGCTTTACCATCCCAACAGGTCAAGTGGTCCATGCAAGCCAGGCCTCCTGACCCACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 ENSMUST00000133817.8 |
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| CDS GCA 72 bp | GCCCTTCAGGCTTCTGAAGGTGCTCTGCTGGTTGTCTaGCACTGGCAATGTCTTCCAGTACCACCACTAGGG | + |
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Preference number: 6 (lower is better) Translates to: ALQASEGALLVV*HWQCLPVPPLG Trigger: CCCTAGTGGTGGTACTGGAAGACATTGCCAGTGGCAGACAACCAGCAGAGCACCTTCAGAAGCCTGAAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132819.3 |
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| CDS GCA 72 bp | CCGGGATCGAGGAAGGCTACTGTCCCGAAATTCTACTaGCCTTCGGAGCTTCCTAGAGCTTCTGGTTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PGSRKATVPKFY*PSELPRASGCG Trigger: CCCACAACCAGAAGCTCTAGGAAGCTCCGAAGGGCAGTAGAATTTCGGGACAGTAGCCTTCCTCGATCCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206915.2 |
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| CDS CCA 72 bp | AGGCTCAGCTCTCGGGTGAAGGGACAAAGTAAGAGTTaGGCGTGCTTCCAAGTCCAGACCCCTTCTGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: RLSSRVKGQSKS*ACFQVQTPSVA Trigger: TGCCACAGAAGGGGTCTGGACTTGGAAGCACGCCCAACTCTTACTTTGTCCCTTCACCCGAGAGCTGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS CAA 72 bp | TGCAGTGGGTCAGGAGGCCTGGCTTGCATGGACCACTaGACCTGTTGGGATGGTAAAGCAGGTGACTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: CSGSGGLACMDH*TCWDGKAGDCV Trigger: CACACAGTCACCTGCTTTACCATCCCAACAGGTCAAGTGGTCCATGCAAGCCAGGCCTCCTGACCCACTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 ENSMUST00000133817.8 |
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| CDS GCA 72 bp | AGCTCTCGGGTGAAGGGACAAAGTAAGAGTTGGGCGTaGTTCCAAGTCCAGACCCCTTCTGTGGCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSRVKGQSKSWA*FQVQTPSVAVL Trigger: AAGCACTGCCACAGAAGGGGTCTGGACTTGGAAGCACGCCCAACTCTTACTTTGTCCCTTCACCCGAGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 |
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| CDS CCA 72 bp | TGTGCAGACAGGATCCTGATGATGGTTGTGAGTCAGTaGGCTGGGAGTGTCCTCTTTGTGTGTCAGGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: CADRILMMVVSQ*AGSVLFVCQGD Trigger: GTCCCCCTGACACACAAAGAGGACACTCCCAGCCCACTGACTCACAACCATCATCAGGATCCTGTCTGCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000133817.8 ENSMUST00000133938.8 |
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| CDS CCA 72 bp | TCAGGAGGCCTGGCTTGCATGGACCACTTGACCTGTTaGGATGGTAAAGCAGGTGACTGTGTGCAGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGGLACMDHLTC*DGKAGDCVQTG Trigger: TCCTGTCTGCACACAGTCACCTGCTTTACCATCCCAACAGGTCAAGTGGTCCATGCAAGCCAGGCCTCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 ENSMUST00000133817.8 |
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| CDS CAA 72 bp | GGTTCTGCCGGCTCGCAGAAGAAGGAAGCAGGGGCATaGGCTGAGCAAGATGTAGTGAGAGAAGGAGAGACT | + |
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Preference number: 6 (lower is better) Translates to: GSAGSQKKEAGA*AEQDVVREGET Trigger: AGTCTCTCCTTCTCTCACTACATCTTGCTCAGCCAATGCCCCTGCTTCCTTCTTCTGCGAGCCGGCAGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS GCA 72 bp | TCTCTGCACAAATGCAGTGGGTCAGGAGGCCTGGCTTaGATGGACCACTTGACCTGTTGGGATGGTAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SLHKCSGSGGLA*MDHLTCWDGKA Trigger: TGCTTTACCATCCCAACAGGTCAAGTGGTCCATGCAAGCCAGGCCTCCTGACCCACTGCATTTGTGCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000132819.3 ENSMUST00000133817.8 |
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| CDS CCA 72 bp | CCTGATTGGTCGAGGCAGCCCCATTGGTGTAAGGTTTaGTTGGAGACGGACAGGTGTCCTCCGTATTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: PDWSRQPHWCKV*LETDRCPPYSE Trigger: TTCAGAATACGGAGGACACCTGTCCGTCTCCAACCAAACCTTACACCAATGGGGCTGCCTCGACCAATCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS GCA 72 bp | TGGGCTGATCTTCATCAAAACCCTCTGCTGGTTGTCTaGCACTGGCAATGTCTTCCAGTACCACCACTAGGG | + |
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Preference number: 6 (lower is better) Translates to: WADLHQNPLLVV*HWQCLPVPPLG Trigger: CCCTAGTGGTGGTACTGGAAGACATTGCCAGTGGCAGACAACCAGCAGAGGGTTTTGATGAAGATCAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS GCA 72 bp | CCGGGATCGAGGAAGGCTACTGTCCCGAAATTCTACTaGCCTTCGGAGCTTCCTAGAGCTGGTAAAAATCAG | + |
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Preference number: 6 (lower is better) Translates to: PGSRKATVPKFY*PSELPRAGKNQ Trigger: CTGATTTTTACCAGCTCTAGGAAGCTCCGAAGGGCAGTAGAATTTCGGGACAGTAGCCTTCCTCGATCCCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS CCA 72 bp | GATCTTCATCAAAACCCTCTGCTGGTTGTCTGCCACTaGCAATGTCTTCCAGTACCACCACTAGGGTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: DLHQNPLLVVCH*QCLPVPPLGWA Trigger: AGCCCACCCTAGTGGTGGTACTGGAAGACATTGCCAGTGGCAGACAACCAGCAGAGGGTTTTGATGAAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS CAA 72 bp | GAGGTTGGGCTGATCTTCATCAAAACCCTCTGCTGGTaGTCTGCCACTGGCAATGTCTTCCAGTACCACCAC | + |
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Preference number: 6 (lower is better) Translates to: EVGLIFIKTLCW*SATGNVFQYHH Trigger: GTGGTGGTACTGGAAGACATTGCCAGTGGCAGACAACCAGCAGAGGGTTTTGATGAAGATCAGCCCAACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS CAA 72 bp | GATTGGTCGAGGCAGCCCCATTGGTGTAAGGTTTGGTaGGAGACGGACAGGTGTCCTCCGTATTCTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: DWSRQPHWCKVW*ETDRCPPYSES Trigger: AGATTCAGAATACGGAGGACACCTGTCCGTCTCCAACCAAACCTTACACCAATGGGGCTGCCTCGACCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS TCA 72 bp | CTGAAGGTGCTTTGTGCTGGGACAATGAGGTTGGGCTaGTCTTCATCAAAACCCTCTGCTGGTTGTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LKVLCAGTMRLG*SSSKPSAGCLP Trigger: TGGCAGACAACCAGCAGAGGGTTTTGATGAAGATCAGCCCAACCTCATTGTCCCAGCACAAAGCACCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 |
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| CDS CCA 72 bp | ATTGGTCGAGGCAGCCCCATTGGTGTAAGGTTTGGTTaGAGACGGACAGGTGTCCTCCGTATTCTGAATCTA | + |
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Preference number: 6 (lower is better) Translates to: IGRGSPIGVRFG*RRTGVLRILNL Trigger: TAGATTCAGAATACGGAGGACACCTGTCCGTCTCCAACCAAACCTTACACCAATGGGGCTGCCTCGACCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS CCA 72 bp | CTTCTTATTCAACCTGATTGGTCGAGGCAGCCCCATTaGTGTAAGGTTTGGTTGGAGACGGACAGGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLIQPDWSRQPH*CKVWLETDRCP Trigger: AGGACACCTGTCCGTCTCCAACCAAACCTTACACCAATGGGGCTGCCTCGACCAATCAGGTTGAATAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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| CDS CAA 90 bp | ATTCAACCTGATTGGTCGAGGCAGCCCCATTGGTGTAAGGTTTGGTaGGAGACGGACAGGTGTCCTCCGTATTCTGAATCTAGAAACCTT | + |
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Preference number: 6 (lower is better) Translates to: IQPDWSRQPHWCKVW*ETDRCPPYSESRNL Trigger: AAGGTTTCTAGATTCAGAATACGGAGGACACCTGTCCGTCTCCAACCAAACCTTACACCAATGGGGCTGCCTCGACCAATCAGGTTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033095.10 ENSMUST00000106292.8 ENSMUST00000206915.2 |
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