RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRR12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046574

Ensembl transcript IDs: ENSMUST00000057293.8

Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACCCCTTCCCTCCTGGCAGCAAGGGAGCCGATAGGAGTCAGCTCTaGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCC +
Preference number: 1 (lower is better)
Translates to: DPFPPGSKGADRSQL*RTALSSSQSAEEVS
Trigger: GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACTCCTATCGGCTCCCTTGCTGCCAGGAGGGAAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR-3UTR CCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACTGGGTTTCGTTTGGCTaGTTGTGTGTACACAGTGTA +
Preference number: 2 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYWVSFG*LCVHSV
Trigger: TACACTGTGTACACACAACCAGCCAAACGAAACCCA...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR-3UTR GCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTCTCTCAAGCCACCCTaGCTCCCTCAACCATACATA +
Preference number: 2 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEESLKPP*LPQPYI
Trigger: TATGTATGGTTGAGGGAGGCAGGGTGGCTTGAGAGA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR CAA 90 bp GGTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTaGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: GFVWLVVCTQCIQGE*YSARERAGGQGEVG
Trigger: TCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR-3UTR TCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCTGGACACACCCTGGCTaGGGACGACCCCTTCCCTCC +
Preference number: 2 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGWTHPG*GRPLPS
Trigger: GGAGGGAAGGGGTCGTCCTCAGCCAGGGTGTGTCCA...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR CAA 90 bp TCCAGCCTGCTGGTAAAGTGTTGCTGTTGGGTTTCGTTTGGCTGGTaGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAG +
Preference number: 2 (lower is better)
Translates to: SSLLVKCCCWVSFGW*CVHSVYKVSCTAPE
Trigger: CTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAACCCAACAGCAACACTTTACCAGCAGGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGGCAAAGATGTTGGCCTaGAGGGGGAAGCTTGGGAGG +
Preference number: 2 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAAKMLA*RGKLGR
Trigger: CCTCCCAAGCTTCCCCCTCCAGGCCAACATCTTTGC...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR-3UTR CAA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACGCTGTTGGGTTTCGTTaGGCTGGTTGTGTGTACACA +
Preference number: 3 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYAVGFR*AGCVYT
Trigger: TGTGTACACACAACCAGCCAAACGAAACCCAACAGC...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR-3UTR CAA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACGTTTCGTTTGGCTGGTaGTGTGTACACAGTGTATAC +
Preference number: 3 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYVSFGW*CVHSVY
Trigger: GTATACACTGTGTACACACAACCAGCCAAACGAAAC...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR GCA 72 bp CCGCAGACAGAGCACTCCAGCCTGCTGGTAAAGTGTTaGTGTTGGGTTTCGTTTGGCTGGTTGTGTGTACAC +
Preference number: 3 (lower is better)
Translates to: PQTEHSSLLVKC*CWVSFGWLCVH
Trigger: GTGTACACACAACCAGCCAAACGAAACCCAACAGCAACACTTTACCAGCAGGCTGGAGTGCTCTGTCTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR TCA 72 bp CGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTaGGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: RLAGCVYTVYTR*VVQRPRKSRRS
Trigger: TGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR CCA 72 bp CTGCTGGTAAAGTGTTGCTGTTGGGTTTCGTTTGGCTaGTTGTGTGTACACAGTGTATACAAGGTGAGTTGT +
Preference number: 3 (lower is better)
Translates to: LLVKCCCWVSFG*LCVHSVYKVSC
Trigger: ACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAACCCAACAGCAACACTTTACCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCGTGGGCTCCAGGCCGTaGCCGCGGAGGTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALVGSRP*PRRWAS
Trigger: TGAAGCCCACCTCCGCGGCCACGGCCTGGAGCCCAC...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCCTCAGAGACAGGTGGTaGTGGCGGTGGTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALLRDRW*WRWWRR
Trigger: CCGCCGCCACCACCGCCACCACCACCTGTCTCTGAG...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCGGCAGGGCCCTCCAGTaGACGAATCCTGGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALGRALQ*TNPGPP
Trigger: GGGAGGCCCAGGATTCGTCCACTGGAGGGCCCTGCC...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCTCCAAGAGGAGGCCATaGGGCGCTGGCTGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALSKRRP*GAGWVA
Trigger: GGCAACCCAGCCAGCGCCCCATGGCCTCCTCTTGGA...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCCATCGCGCTTTGCCTTaGTGGGCTTGCGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALHRALP*WACGHG
Trigger: GCCGTGGCCGCAAGCCCACCAAGGCAAAGCGCGATG...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCCGGTGGTGGAGGAGGTaGGCTAGCCACAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALRWWRR*ASHRSH
Trigger: GTGACTCCTGTGGCTAGCTCACCTCCTCCACCACCG...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCTCCACCACTCTCCCCTaGCTCCTCATCCGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALSTTLP*LLIRLP
Trigger: GGGGAGACGGATGAGGAGGCAGGGGAGAGTGGTGGA...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCCAGGGGTCTCAGGCTTaGGAGGTGGCGCTTGGACCT +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALQGSQA*EVALGP
Trigger: AGGTCCAAGCGCCACCTCCCAAGCCTGAGACCCCTG...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCCAAGACACCACCCCCTaGCAGGCGCTCGAAACCCAA +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALQDTTP*QALETQ
Trigger: TTGGGTTTCGAGCGCCTGGCAGGGGGTGGTGTCTTG...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGCAGCCTTCCTGCCTCTaGCCCTGCCCCGGCCCCGAG +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLQPSCL*PCPGPE
Trigger: CTCGGGGCCGGGGCAGGGGCAGAGGCAGGAAGGCTG...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACTGGGACCGTTGTGGGTaGTGGCGGGGGCGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYWDRCG*WRGRWR
Trigger: CCTCCACCGCCCCCGCCAGCACCCACAACGGTCCCA...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCATGTCGGTTTCTGGGTaGGAAGTCCGGGAGCTGCCG +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALMSVSG*EVRELP
Trigger: CGGCAGCTCCCGGACTTCCCACCCAGAAACCGACAT...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCCCAGGCTCTGACACTTaGGTGTGGCGGTGGATCGAG +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALPGSDT*VWRWIE
Trigger: CTCGATCCACCGCCACACCCAAGTGTCAGAGCCTGG...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCCCAGCCGCCTCCGTaGCCTGAGAGAGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYPQPPP*PERAGE
Trigger: CTCCCCTGCTCTCTCAGGCCACGGAGGCGGCTGGGG...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTGGGCACGGTGGGTGGTaGGGGCTGCAGGCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPGHGGW*GLQASG
Trigger: ACCCGAGGCCTGCAGCCCCCACCACCCACCGTGCCC...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCGCCGCCTCCGTGGCCTaGGAGAGCAGGGGAGTGACC +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSAASVA*ESRGVT
Trigger: GGTCACTCCCCTGCTCTCTCAGGCCACGGAGGCGGC...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCGTGTGCATGGCTGTCTaGCAGGAAGGGCTTCGGAAC +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALVCMAV*QEGLRN
Trigger: GTTCCGAAGCCCTTCCTGGCAGACAGCCATGCACAC...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCTCCCTTGTAGCCGCCTaGTCCAGCTGCATAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALSLVAA*SSCIAA
Trigger: AGCAGCTATGCAGCTGGAGCAGGCGGCTACAAGGGA...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACGCTCCGGCGTGCCACTaGTGTTGCTGCTGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYAPACH*CCCWAG
Trigger: GCCTGCCCAGCAGCAACAGCAGTGGCACGCCGGAGC...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGGTTGTAGGGCTCCCCTaGAGGCCGCAGCCGCACGGC +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLVVGLP*RPQPHG
Trigger: GCCGTGCGGCTGCGGCCTGCAGGGGAGCCCTACAAC...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGGAGGCCATGGGGCGCTaGCTGGGTTGCCTGGGCCGA +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLEAMGR*LGCLGR
Trigger: TCGGCCCAGGCAACCCAGCCAGCGCCCCATGGCCTC...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACGGGCAGGAGGCGGAGTaGGTGGGGGCTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYGQEAE*VGASPP
Trigger: TGGAGGAGAAGCCCCCACCCACTCCGCCTCCTGCCC...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGGGCCCGGTGGCCCATTaGGGGATAGCTGCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLGPVAH*GIAASA
Trigger: TGCGGAGGCAGCTATCCCTCAATGGGCCACCGGGCC...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCCTCAAGTCCTGTGCTTaGCCCCCTCCAAATCCTTGC +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALLKSCA*PPPNPC
Trigger: GCAAGGATTTGGAGGGGGTCAAGCACAGGACTTGAG...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGGAGGTGGCGGGGAGGTaGAGGTGGATCTGGGGGACC +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLEVAGR*RWIWGT
Trigger: GGTCCCCCAGATCCACCTCCACCTCCCCGCCACCTC...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACGCTGGCTCAAGGAGGTaGACGCCGACTTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYAGSRR*TPTLGA
Trigger: CGCCCCCAAAGTCGGCGTCCACCTCCTTGAGCCAGC...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACAGGGCCTGTGAGGGGTaGGTCGTCCAGGGCCGAGAT +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYRACEG*VVQGRD
Trigger: ATCTCGGCCCTGGACGACCCACCCCTCACAGGCCCT...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACGGCAGGAGGCTCCTCTaGAGGGGCAACTGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYGRRLL*RGNWWD
Trigger: GTCCCACCAGTTGCCCCTCCAGAGGAGCCTCCTGCC...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCGGTGCCAGGGTTTCCTaGCGCACACCCTCACATAAT +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALGARVS*RTPSHN
Trigger: ATTATGTGAGGGTGTGCGCCAGGAAACCCTGGCACC...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGCCCGCTCATCCTCGCTaGGTGCGCCAGGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLPAHPR*VRQGRT
Trigger: AGTCCTCCCCTGGCGCACCCAGCGAGGATGAGCGGG...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCTGTTCTAGCCATGGCTaGTTCCGCATGCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALCSSHG*FRMHCW
Trigger: CCAGCAGTGCATGCGGAACCAGCCATGGCTAGAACA...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCGCCTGGAGCAGGTGCTaGATGAGAAACTCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALAWSRC*MRNSSS
Trigger: AGACGAAGAGTTTCTCATTCAGCACCTGCTCCAGGC...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTGGCTGGGGGCATGGCTaGGCACAGAAGGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPGWGHG*AQKGGA
Trigger: AGCTCCTCCCTTCTGTGCTCAGCCATGCCCCCAGCC...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACGCCCCGAGCAGTTCTTaGATGGCTCCAGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYAPSSS*MAPGGS
Trigger: GGAGCCTCCTGGAGCCATGCAAGAACTGCTCGGGGC...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCCTCATCCTCGCTGGGTaGGCCAGGGGAGGACTCGGA +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSLILAG*ARGGLG
Trigger: TCCGAGTCCTCCCCTGGCGCACCCAGCGAGGATGAG...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACCTGACCCAGGTCCTCTaGACCACCCTCGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYLTQVL*TTLDGQ
Trigger: CTGGCCATCGAGGGTGGTGCAGAGGACCTGGGTCAG...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTAGGAGGCGGAGTGGGTaGGGGCTTCTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPRRRSG*GLLLQQ
Trigger: CTGCTGGAGGAGAAGCCCCCACCCACTCCGCCTCCT...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCAACACGCCAGATGGGTaGGGGCTCCCGGCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSNTPDG*GLPASL
Trigger: CAGACTGGCCGGGAGCCCCCACCCATCTGGCGTGTT...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCCCTCTTCTTTGGAGGTaGCTCAGCCTTCACCTTCGA +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALPLLWR*LSLHLR
Trigger: TCGAAGGTGAAGGCTGAGCCACCTCCAAAGAAGAGG...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGAGAAGATGGGCGAGGTaGGGCCACCCTTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLRRWAR*GHPWAQ
Trigger: CTGAGCCCAAGGGTGGCCTCACCTCGCCCATCTTCT...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACAAGTCCAGAGAGGCCTaGAGGGTGGTGGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYKSREA*RVVVGG
Trigger: GCCACCAACCACCACCCTGCAGGCCTCTCTGGACTT...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACAGGAAGACGGGAAGGTaGTGGAACCTGGGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYRKTGR*WNLGGH
Trigger: GTGCCCTCCCAGGTTCCAGCACCTTCCCGTCTTCCT...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGGCCGCCTGCTCCAGCTaGATAGCTGCTAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLAACSS*IAASSR
Trigger: CCTGGAGCTAGCAGCTATGCAGCTGGAGCAGGCGGC...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTAAAAGGACCAGAGGGTaGCGGGTGCGGCACAGTGGG +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPKRTRG*RVRHSG
Trigger: CCCACTGTGCCGCACCCGGCACCCTCTGGTCCTTTT...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCAGTCTGCTCCACCTaGAGCTGTGGGAACGTGTGC +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYPVCST*SCGNVC
Trigger: GCACACGTTCCCACAGCTGCAGGTGGAGCAGACTGG...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACGAGCCTTCTCCAGTCTaGTCCACCTGCAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYEPSPV*STCSCG
Trigger: CCCACAGCTGCAGGTGGAGCAGACTGGAGAAGGCTC...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACAGGTGGAGGTGGATCTaGGGGACCAGGACGGTAAGG +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYRWRWI*GTRTVR
Trigger: CCTTACCGTCCTGGTCCCCCAGATCCACCTCCACCT...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGCCCATCCCGGGTGGCTaGCTCAAGGAGGTGGACGCC +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEPIPGG*LKEVDA
Trigger: GGCGTCCACCTCCTTGAGCCAGCCACCCGGGATGGG...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGGCGCCCCATCCCGGGTaGCTGGCTCAAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEAPHPG*LAQGGG
Trigger: TCCACCTCCTTGAGCCAGCCACCCGGGATGGGGCGC...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGGGGCTCAGAGACAGGTaGTGGTGGCGGTGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEGLRDR*WWRWWR
Trigger: CCGCCACCACCGCCACCACCACCTGTCTCTGAGCCC...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCGCAGCTTCTTTGGCTTaGTTGAACAGAAGATGGGCG +
Preference number: 4 (lower is better)
Translates to: TDPCSRCPGLPTAADRALAASLA*LNRRWA
Trigger: CGCCCATCTTCTGTTCAACCAAGCCAAAGAAGCTGC...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCGACCAGTACTGTAGCTaGGGGAAGGGCTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSDQYCS*GKGWLW
Trigger: CCACAGCCAGCCCTTCCCTCAGCTACAGTACTGGTC...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCCGGCGCCGCAGCAGGTaGAATGAGGATGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSRRRSR*NEDVFS
Trigger: GCTGAAGACATCCTCATTTCACCTGCTGCGGCGCCG...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTCTGCAGGGCCAGCTTaGGGGAGGGTATGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSSAGPA*GRVCPL
Trigger: CAGAGGACATACCCTCCCTCAAGCTGGCCCTGCAGA...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACTGGACAACCTCTTCCTaGCCCAGGTCCTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYWTTSS*PRSSAP
Trigger: TGGTGCAGAGGACCTGGGTCAGGAAGAGGTTGTCCA...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGGTCCGGATGACGCTCTaGAGGTGGTACCTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLVRMTL*RWYLWG
Trigger: TCCCCAGAGGTACCACCTGCAGAGCGTCATCCGGAC...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGGTGTGCAGGGCATCCTaGAGAGCTGGGCTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLVCRAS*RAGLSD
Trigger: GTCACTGAGCCCAGCTCTGCAGGATGCCCTGCACAC...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTAAGACGGGAAGGTGCTaGAACCTGGGAGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPKTGRC*NLGGHQ
Trigger: CTGGTGCCCTCCCAGGTTCCAGCACCTTCCCGTCTT...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTCTGAAGGGTGGATCCTaGAGGCTGAGGGATGAGGGC +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPLKGGS*RLRDEG
Trigger: GCCCTCATCCCTCAGCCTCCAGGATCCACCCTTCAG...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGACTCCAGGGCGGCCGTaGCACCCTCATCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEETPGRP*HPHPDW
Trigger: CCAGTCTGGATGAGGGTGCCACGGCCGCCCTGGAGT...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTGGTGGACTGTCCTGTaGCCAAGCTCCGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSWWTVL*PSSGQS
Trigger: GGACTGACCGGAGCTTGGCCACAGGACAGTCCACCA...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGCTCCACCTGCAGCTGTaGGAACGTGTGCAGGGCATC +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLLHLQL*ERVQGI
Trigger: GATGCCCTGCACACGTTCCCACAGCTGCAGGTGGAG...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTGCCGGCAAGCAGCTCTaGGCCATCACCTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPAGKQL*AITFSL
Trigger: AAGGGAAAAGGTGATGGCTCAGAGCTGCTTGCCGGC...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGGTGGGGCCCGGTGTGTaGATGGCTGTCTGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEVGPGV*MAVCQE
Trigger: TTCCTGGCAGACAGCCATGCACACACCGGGCCCCAC...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGCACCTCCCAAAGGGCTaGAAGCCAAGCTGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEHLPKG*KPSWPG
Trigger: ACCGGGCCAGCTTGGCTTGCAGCCCTTTGGGAGGTG...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTGTAGCCCGGCCAGCTaGTCCAGCTGTGGCTCCACT +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEECSPAS*SSCGST
Trigger: AGTGGAGCCACAGCTGGAGCAGCTGGCCGGGCTACA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGCGGTCTGTCCGGCCTTaGCATAGTCATCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEERSVRP*HSHRLP
Trigger: GGGCAGCCGATGACTATGGCAAGGCCGGACAGACCG...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGGCAGCGTCTCGAGGTTaGGCTTCAGCTCTTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLAASRG*ASALRP
Trigger: TGGACGAAGAGCTGAAGCGCAACCTCGAGACGCTGC...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGCTCGCTCCCGGAAGATaGCCTCTCCACCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEELAPGR*PLHHSP
Trigger: GGGAGAGTGGTGGAGAGGGCATCTTCCGGGAGCGAG...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTGAAGGGCTTCGGAACTaGGAAAGGAGAGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPEGLRN*ERREEA
Trigger: CGCCTCCTCTCTCCTTTCCCAGTTCCGAAGCCCTTC...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGAGGAGGACTGAAGGGTaGATCCTGGAGGCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLRRTEG*ILEAEG
Trigger: TCCCTCAGCCTCCAGGATCCACCCTTCAGTCCTCCT...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCATGGGCAGCTGGCCCTaGGTAAGGCTCACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSMGSWP*VRLTLY
Trigger: GTACAGAGTGAGCCTTACCCAGGGCCAGCTGCCCAT...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGAGGGATCATAAGCAGTaGGACCAGGGGGTGGACCAG +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLRDHKQ*DQGVDQ
Trigger: CTGGTCCACCCCCTGGTCCCACTGCTTATGATCCCT...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTGGTGTGGCCCGCTCTaGATCAGGCCCAGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEWCGPL*IRPSGS
Trigger: AGAGCCACTGGGCCTGATCCAGAGCGGGCCACACCA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTCCGTCTCTTGCTTCTTaGCCAGGTGCAAAGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPPSLAS*PGAKAE
Trigger: CTCGGCCTTTGCACCTGGCCAAGAAGCAAGAGACGG...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGTTGGGAGGTGGCGCTTaGACCTTAGACGGAGGTGCA +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLLGGGA*TLDGGA
Trigger: TGCACCTCCGTCTAAGGTCCAAGCGCCACCTCCCAA...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCGGACGCCATGAACCCTaGCTTCATCTCCGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSGRHEP*LHLRLF
Trigger: AAACAGCCGGAGATGAAGTCAGGGTTCATGGCGTCC...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTGCAGAAGGGCCTTCTaGACACGCCAGATGGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEECRRAF*TRQMGG
Trigger: CCCACCCATCTGGCGTGTTCAGAAGGCCCTTCTGCA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGCCGAGGTGGGCTAGGTaGCTGGAGCAGGTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEPRWAR*LEQVLN
Trigger: ATTCAGCACCTGCTCCAGGCACCTAGCCCACCTCGG...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTTCGCCACCCCGTTCTaGCCCCTTCTTCTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSFATPF*PLLLVL
Trigger: AAGGACAAGAAGAAGGGGCCAGAACGGGGTGGCGAA...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGCTGGATCAGGCCCAGTaGCTCTGCATTGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLLDQAQ*LCIDCG
Trigger: TCCACAGTCAATGCAGAGCCACTGGGCCTGATCCAG...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCACCGGGTGCGGCACAGTaGGCACGGTGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERAPGAAQ*ARWVVG
Trigger: CCCCACCACCCACCGTGCCCACTGTGCCGCACCCGG...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTATATCTCCCAGTGGTaGGAGGGCTGGTCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEYISQW*EGWSGA
Trigger: CGCTCCAGACCAGCCCTCTCACCACTGGGAGATATA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTCCGAACTTAAGTATTTaGCAGGGGCTCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPPNLSI*QGLLES
Trigger: GCTCTCCAGGAGCCCCTGGCAAATACTTAAGTTCGG...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGGGGCGCTGGCTGGGTTaGCTGGGCCGAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAGRWLG*LGRGWW
Trigger: CCACCACCCTCGGCCCAGGCAACCCAGCCAGCGCCC...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCGAGGAAATGCTCTCCTaGAGGTCTCTGTTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSEEMLS*RSLFLA
Trigger: GGCCAAGAACAGAGACCTGCAGGAGAGCATTTCCTC...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTGCTTCTTGGCCAGGTaGAAAGGCCGAGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEECFLAR*KGRASG
Trigger: TCCAGACGCTCGGCCTTTGCACCTGGCCAAGAAGCA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGCTGGTGGCACAAAACTaGCTCTGGCCATCCTTGATC +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLLVAQN*LWPSLI
Trigger: GATCAAGGATGGCCAGAGGCAGTTTTGTGCCACCAG...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCACCATGGGGCGCTGGCTaGGTTGCCTGGGCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERAPWGAG*VAWAEG
Trigger: ACCCTCGGCCCAGGCAACCCAGCCAGCGCCCCATGG...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTGTACATCTCCCGCATaGCCCGTGTCTTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEECTSPA*PVSSAA
Trigger: GGCTGCTGAAGACACGGGCCATGCGGGAGATGTACA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTTCTCCTCTACCTCCTTaGTCTTGGCCTCGATCTTCT +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPSPLPP*SWPRSS
Trigger: AGAAGATCGAGGCCAAGATCAAGGAGGTAGAGGAGA...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGTTTGCTCAAGTCCTGTaGTTGACCCCCTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLFAQVL*LTPSKS
Trigger: GGATTTGGAGGGGGTCAAGCACAGGACTTGAGCAAA...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGGGCGGTGGATCGAGGTaGCGGTGGCCTGGTGGCACC +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAGGGSR*RWPGGT
Trigger: GGTGCCACCAGGCCACCGCCACCTCGATCCACCGCC...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTTGCAGGTGGTACCTCTaGGGATCTTCCTTGGCTAAT +
Preference number: 4 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPCRWYL*GSSLAN
Trigger: ATTAGCCAAGGAAGATCCCCAGAGGTACCACCTGCA...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGGCTGGCTGGGTTGCCTaGGCCGAGGGTGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAAGWVA*AEGGGG
Trigger: TCCCCCACCACCCTCGGCCCAGGCAACCCAGCCAGC...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACGCAGGTCTCTGTTCTTaGCCACAGAGTCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYAGLCS*PQSLLH
Trigger: ATGAAGAAGACTCTGTGGCCAAGAACAGAGACCTGC...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGCGGCGGCGGCGGTGCTaGCTGGTGTGGCCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRRRRRC*LVWPAL
Trigger: CAGAGCGGGCCACACCAGTCAGCACCGCCGCCGCCG...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGCCGCAGCAGGTGAAATaGGGATGTCTTCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEPQQVK*GCLQQL
Trigger: AAGCTGCTGAAGACATCCTCATTTCACCTGCTGCGG...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGGCGGGGAGGTGGAGGTaGATCTGGGGGACCAGGACG +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAAGRWR*IWGTRT
Trigger: CGTCCTGGTCCCCCAGATCCACCTCCACCTCCCCGC...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCATCTGAACACGCCAGATaGGTGGGGGCTCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERASEHAR*VGAPGQ
Trigger: CTGGCCGGGAGCCCCCACCCATCTGGCGTGTTCAGA...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGTCGAGGGCCTGGCTTTaGGCAGCCGGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTASRAWL*AAGRWW
Trigger: CCACCACCTCCCGGCTGCCCAAAGCCAGGCCCTCGA...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCTTGCCTTGGTGGGCTTaGGGCCACGGCGACGCGGGC +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGLPWWA*GHGDAG
Trigger: GCCCGCGTCGCCGTGGCCGCAAGCCCACCAAGGCAA...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGGTGGGGGCTGGGCACTaGCCGGCCGCTGATAGTGTT +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAVGAGH*PAADSV
Trigger: AACACTATCAGCGGCCGGCCAGTGCCCAGCCCCCAC...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCAGGGGAATATGCCTaGCTCCCAGCCCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAPGEYA*LPAPPA
Trigger: GGCTGGTGGGGCTGGGAGCCAGGCATATTCCCCTGG...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCAAGGTTCAGGGTCCTCTaGGGATGGGGCAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERARFRVL*GWGRRL
Trigger: GAGCCTCCTGCCCCATCCCCAGAGGACCCTGAACCT...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCAAGCGGCATAAGCAGCTaGAGGTCCACCCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERASGISS*RSTQAL
Trigger: CAGAGCCTGGGTGGACCTGCAGCTGCTTATGCCGCT...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCAGAGGGGGCCGGTaGCAGGGTTTCCTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRGRGGR*QGFLAH
Trigger: GTGCGCCAGGAAACCCTGGCACCGGCCCCCTCTGCC...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCCACCTCCCAGAGAGCTaGGTCCCCAGCCGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGHLPES*VPSRLR
Trigger: ACGGAGGCGGCTGGGGACCCAGCTCTCTGGGAGGTG...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCGCTGCAGGCCTCGGGTaGGCACAGAGGCTGGCACAC +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGAAGLG*AQRLAH
Trigger: GTGTGCCAGCCTCTGTGCCCACCCGAGGCCTGCAGC...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCCACCCGCAGCGGCTATaGGCCTGTGCTTGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGHPQRL*ACAWAS
Trigger: GCTGGCCCAAGCACAGGCCCATAGCCGCTGCGGGTG...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGGGAGGGCACCAGAGATaGAGAGTTCCGTGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWGGHQR*RVPWGP
Trigger: CGGGCCCCACGGAACTCTTCATCTCTGGTGCCCTCC...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGCTGGCCAGGGGAATATaGCTGGCTCCCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWLARGI*LAPSPT
Trigger: GGTGGGGCTGGGAGCCAGGCATATTCCCCTGGCCAG...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGTCCTGCCTCTGCCCCTaGCCCGGCCCCGAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRSCLCP*PGPEVS
Trigger: AGAAACCTCGGGGCCGGGGCAGGGGCAGAGGCAGGA...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGGGCCCGGTGTGTGCATaGCTGTCTGCCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWGPVCA*LSARKG
Trigger: GCCCTTCCTGGCAGACAGCCATGCACACACCGGGCC...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGGGCTGCAAGCCAAGCTaGCCCGGTGGCCCATTGAGG +
Preference number: 4 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWGCKPS*PGGPLR
Trigger: CCTCAATGGGCCACCGGGCCAGCTTGGCTTGCAGCC...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTCTGGGGATCTTCCTTaGCTAATTCATATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEESGDLP*LIHMVC
Trigger: GCACACCATATGAATTAGCCAAGGAAGATCCCCAGA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGCTGGGCCGAGGGTGGTaGGGGAGGTGGGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRLGRGW*GRWALL
Trigger: CAGAAGAGCCCACCTCCCCCACCACCCTCGGCCCAG...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGCGCGCTTTGCCTTGGTaGGCTTGCGGCCACGGCGAC +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRRALPW*ACGHGD
Trigger: GTCGCCGTGGCCGCAAGCCCACCAAGGCAAAGCGCG...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCGCTTGGGAGAGGGGGTaGACCGGAGGCTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGAWERG*TGGCRS
Trigger: GGACCTACAGCCTCCGGTCCACCCCCTCTCCCAAGC...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGAGCCGGCTGAGGTGTTaGGGCAGGAGGCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRSRLRC*GRRRSG
Trigger: CCCACTCCGCCTCCTGCCCCAACACCTCAGCCGGCT...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGGCCATCCTTGATCTCTaGAGTGAATTTCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEAILDL*SEFLQK
Trigger: CTTCTGCAGAAATTCACTCCAGAGATCAAGGATGGC...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCTCAGGCTTGGGAGGTaGCGCTTGGACCTTAGACGG +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTALRLGR*RLDLRR
Trigger: CCGTCTAAGGTCCAAGCGCCACCTCCCAAGCCTGAG...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCGCAGCCGGGAGGTGGTaGACTGTCCTGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGAAGRW*TVLWPS
Trigger: GCTTGGCCACAGGACAGTCCACCACCTCCCGGCTGC...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCTCACCTTCGAGGGCCTaGCTTTGGGCAGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGSPSRA*LWAAGR
Trigger: CCTCCCGGCTGCCCAAAGCCAGGCCCTCGAAGGTGA...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGGCCAGCAGATTGAACTaGGTCGGGAGGTGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWASRLN*VGRWRG
Trigger: TCCCCGCCACCTCCCGACTCAGTTCAATCTGCTGGC...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGGCTTCTGTAGGCGCCTaGAGGATCTTTGCCCTCCGA +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAASVGA*RIFALR
Trigger: TCGGAGGGCAAAGATCCTGCAGGCGCCTACAGAAGC...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGAGGGCCATCGCGCTTTaGCTTGGTGGGCTTGCGGCC +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRRAIAL*LGGLAA
Trigger: GGCCGCAAGCCCACCAAGGCAAAGCGCGATGGCCCT...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCAGAAGGTGCTGGAACCTaGGAGGGCACCAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERAEGAGT*EGTRDE
Trigger: TTCATCTCTGGTGCCCTCCCAGGTTCCAGCACCTTC...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCAATGACGCTCTGCAGGTaGTACCTCTGGGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERAMTLCR*YLWGSS
Trigger: GGAAGATCCCCAGAGGTACCACCTGCAGAGCGTCAT...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGAGGCTCCCAGCTCCTTaGCACCGGCTCCATAGTGAA +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTARLPAP*HRLHSE
Trigger: TTCACTATGGAGCCGGTGCCAAGGAGCTGGGAGCCT...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGTGGTCCCTTGAGGGCTaGGGCTTCTGTAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWWSLEG*GFCRRL
Trigger: CAGGCGCCTACAGAAGCCCCAGCCCTCAAGGGACCA...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGCAAACCGCGGTGCCTTaGTCCCTTGAGGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRQTAVP*SLEGWG
Trigger: GCCCCAGCCCTCAAGGGACCAAGGCACCGCGGTTTG...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCAGTGGGACCAGGGGGTaGACCAGCACCAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGSGTRG*TSTSLG
Trigger: CCCAAGACTGGTGCTGGTCCACCCCCTGGTCCCACT...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGAGGGTCCTCTGGGGATaGGGCAGGAGGCTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRRVLWG*GRRLLW
Trigger: CCAGAGGAGCCTCCTGCCCCATCCCCAGAGGACCCT...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCTCAGGGGCTGGCTCTaGAGGCTTCTCCGATGTCAT +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTALRGWL*RLLRCH
Trigger: ATGACATCGGAGAAGCCTCCAGAGCCAGCCCCTGAG...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCTATGGGCCTGTGCTTaGGCCAGCAGGTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTALWACA*ASRSLK
Trigger: CTTCAGTGACCTGCTGGCCCAAGCACAGGCCCATAG...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGCTGCGCTCCTCGTCCTaGAGCAATGAGTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWLRSSS*SNESGK
Trigger: CTTCCCCGACTCATTGCTTCAGGACGAGGAGCGCAG...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGTCAGGAGGTTTGTTGTaGTCCAGACCCAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTASGGLL*SRPRPG
Trigger: TCCAGGCCTGGGTCTGGATCACAACAAACCTCCTGA...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGGCCGCTTGCCTGACTTaGGAAAGTCAAGGAAGGACG +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAAACLT*ESQGRT
Trigger: CGTCCTTCCTTGACTTTCTCAAGTCAGGCAAGCGGC...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGACCGCTGCCGTCTCTTaGTTCTTGGCCAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTATAAVS*FLARCK
Trigger: TTTGCACCTGGCCAAGAAGCAAGAGACGGCAGCGGT...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCCCTGCTGAGCCCGCGTaGTGGAGGCCAGTGTCAAAA +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGPAEPA*WRPVSK
Trigger: TTTTGACACTGGCCTCCACCACGCGGGCTCAGCAGG...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCAGAAGCCCTTGGGGCTaGCCAGGGGAATATGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGRSPWG*PGEYAW
Trigger: CCAGGCATATTCCCCTGGCCAGCCCCAAGGGCTTCT...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCAAGTGAACGACTGAGGTaGCTAGTCCCTCGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERASERLR*LVPREF
Trigger: AAACTCCCGAGGGACTAGCCACCTCAGTCGTTCACT...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGGTGGAGGCAGCACCATaGGAAGGTCAGGACCTCCAG +
Preference number: 4 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWVEAAP*EGQDLQ
Trigger: CTGGAGGTCCTGACCTTCCCATGGTGCTGCCTCCAC...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCAGGAAGCCAGCAGATTaGACTGAGTCGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGRKPAD*TESGGG
Trigger: GCCACCTCCCGACTCAGTTCAATCTGCTGGCTTCCT...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGGGGCCAGCAGGTCACTaGAGGAGTCGAACAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWGPAGH*RSRTAV
Trigger: AACAGCTGTTCGACTCCTTCAGTGACCTGCTGGCCC...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCATTGAGGGATAGCTaGCTCCGCAGCTCAGATAGT +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAPLRDS*LRSSDS
Trigger: ACTATCTGAGCTGCGGAGGCAGCTATCCCTCAATGG...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCAGCTGTGGGAACGTGTaGAGGGCATCCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGSCGNV*RASCRA
Trigger: AGCTCTGCAGGATGCCCTGCACACGTTCCCACAGCT...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGATGGCTGGTTCCGCATaGACTGCTGGACAACCTCTT +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAMAGSA*TAGQPL
Trigger: AAGAGGTTGTCCAGCAGTGCATGCGGAACCAGCCAT...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCGCTGAGCCCGCGTGGTaGAGGCCAGTGTCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGAEPAW*RPVSKS
Trigger: ACTTTTTGACACTGGCCTCCACCACGCGGGCTCAGC...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCAGCTTGATCTTAAGTaGCTTCAGGGGCTCCAACCG +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAQLDLK*LQGLQP
Trigger: CGGTTGGAGCCCCTGAAGCCACTTAAGATCAAGCTG...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCTCTCCCGGGTCAGGTTaGAGTCCAGGCTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGSPGSG*SPGCCG
Trigger: ACCACAACAGCCTGGACTCCAACCTGACCCGGGAGA...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCATTTTCTTGTGCTCATTaGGGAGGCCGTCAATCTTCC +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERAFSCAH*GGRQSS
Trigger: GGAAGATTGACGGCCTCCTCAATGAGCACAAGAAAA...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGCTGGGTCCAGGGCTGTaGTCACCAGCATCTCCACAT +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRLGPGL*SPASPH
Trigger: ATGTGGAGATGCTGGTGAGCACAGCCCTGGACCCAG...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCAAGGACCTTTTTCTTGTaGTCATTGAGGAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERARTFFL*SLRRPS
Trigger: TGACGGCCTCCTCAATGAGCACAAGAAAAAGGTCCT...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGAGGACCAGGGTTGGGTaGGCAAAAGTCTATATCTCC +
Preference number: 4 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTARTRVG*AKVYIS
Trigger: GGAGATATAGACTTTTGCCCACCCAACCCTGGTCCT...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCCAAGCTAGCTTTCGCTaGCCTCTCGTAACTCCATCC +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGQASFR*PLVTPS
Trigger: GGATGGAGTTACGAGAGGTCAGCGAAAGCTAGCTTG...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR GCA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGATGGCGGAGGAAATaGTCTCCTGCAGGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWRWRRK*SPAGLC
Trigger: ACAGAGACCTGCAGGAGAGCATTTCCTCCGCCATCT...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCCTTCTTTGGCTTGGTTaGACAGAAGATGGGCGAGGT +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGLLWLG*TEDGRG
Trigger: ACCTCGCCCATCTTCTGTTCAACCAAGCCAAAGAAG...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGCAGGGTGGTGGTTGGTaGCATAGCTTTGTAGTGGGT +
Preference number: 4 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRQGGGW*HSFVVG
Trigger: ACCCACTACAAAGCTATGCCACCAACCACCACCCTG...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCACCCTGAAGCTGGTCTaGAGAGTAACTCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGTLKLV*RVTLTG
Trigger: ACCTGTCAGAGTTACTCTCCAGACCAGCTTCAGGGT...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCCGTCAGGACCAGGGTTaGGTGGGCAAAAGTCTATAT +
Preference number: 4 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGRQDQG*VGKSLY
Trigger: ATATAGACTTTTGCCCACCCAACCCTGGTCCTGACG...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCAAACCCAGATAATTACTaGTGGCACAAAACTGCCTCT +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERANPDNY*WHKTAS
Trigger: AGAGGCAGTTTTGTGCCACCAGTAATTATCTGGGTT...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
3UTR CAA 72 bp CTGGTAAAGTGTTGCTGTTGGGTTTCGTTTGGCTGGTaGTGTGTACACAGTGTATACAAGGTGAGTTGTACA +
Preference number: 4 (lower is better)
Translates to: LVKCCCWVSFGW*CVHSVYKVSCT
Trigger: TGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAACCCAACAGCAACACTTTACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR TCA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCACATAATCCTTCTTGTTaGCATTCTCCAAGAACTTCA +
Preference number: 4 (lower is better)
Translates to: VVCTQCIQGELYSARERAHNPSC*HSPRTS
Trigger: TGAAGTTCTTGGAGAATGTCAACAAGAAGGATTATG...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp TGGGCCTCCCCCTGGGTCGGGGAGGGCCATCGCGCTTTGCCTTGGTaGGCTTGCGGCCACGGCGACGCGGGCCGTCAGGACCAGGGTTGG +
Preference number: 5 (lower is better)
Translates to: WASPWVGEGHRALPW*ACGHGDAGRQDQGW
Trigger: CCAACCCTGGTCCTGACGGCCCGCGTCGCCGTGGCCGCAAGCCCACCAAGGCAAAGCGCGATGGCCCTCCCCGACCCAGGGGGAGGCCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp CCGCCATGGCAGGGCCCTCCAGTGGACGAATCCTGGGCCTCCCCCTaGGTCGGGGAGGGCCATCGCGCTTTGCCTTGGTGGGCTTGCGGC +
Preference number: 5 (lower is better)
Translates to: PPWQGPPVDESWASP*VGEGHRALPWWACG
Trigger: GCCGCAAGCCCACCAAGGCAAAGCGCGATGGCCCTCCCCGACCCAGGGGGAGGCCCAGGATTCGTCCACTGGAGGGCCCTGCCATGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp AGGACCAGAGGGTGCCGGGTGCGGCACAGTGGGCACGGTGGGTGGTaGGGGCTGCAGGCCTCGGGTGGGCACAGAGGCTGGCACACTCTT +
Preference number: 5 (lower is better)
Translates to: RTRGCRVRHSGHGGW*GLQASGGHRGWHTL
Trigger: AAGAGTGTGCCAGCCTCTGTGCCCACCCGAGGCCTGCAGCCCCCACCACCCACCGTGCCCACTGTGCCGCACCCGGCACCCTCTGGTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCCAACTGGTGGGACCGTaGTGGGTGCTGGCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: TDPCSRCPGLPTAADRALQLVGP*WVLAGA
Trigger: CGCCCCCGCCAGCACCCACAACGGTCCCACCAGTTG...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp AGAGACAGGTGGTGGTGGCGGTGGTGGCGGCGGCGGCGGCGGTGCTaGCTGGTGTGGCCCGCTCTGGATCAGGCCCAGTGGCTCTGCATT +
Preference number: 5 (lower is better)
Translates to: RDRWWWRWWRRRRRC*LVWPALDQAQWLCI
Trigger: AATGCAGAGCCACTGGGCCTGATCCAGAGCGGGCCACACCAGTCAGCACCGCCGCCGCCGCCGCCACCACCGCCACCACCACCTGTCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp ACAGGTGGTGGTGGCGGTGGTGGCGGCGGCGGCGGCGGTGCTGACTaGTGTGGCCCGCTCTGGATCAGGCCCAGTGGCTCTGCATTGACT +
Preference number: 5 (lower is better)
Translates to: TGGGGGGGGGGGGAD*CGPLWIRPSGSALT
Trigger: AGTCAATGCAGAGCCACTGGGCCTGATCCAGAGCGGGCCACACCAGTCAGCACCGCCGCCGCCGCCGCCACCACCGCCACCACCACCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCAGGTGGACGCCGACTTaGGGGGCGCTAGGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: TDPCSRCPGLPTAADRALRWTPT*GALGEG
Trigger: CCCCTCACCTAGCGCCCCCAAAGTCGGCGTCCACCT...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCGAGGGCCATCGCGCTTaGCCTTGGTGGGCTTGCGGC +
Preference number: 5 (lower is better)
Translates to: TDPCSRCPGLPTAADRALEGHRA*PWWACG
Trigger: GCCGCAAGCCCACCAAGGCAAAGCGCGATGGCCCTC...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp AGGGCAGCGTCTCGAGGTTGCGCTTCAGCTCTTCGTCCAGCCGCTTaGAGGGGGAAGGGCAGCCGAGGCCCAACCCTTCGCTCTCCGCCG +
Preference number: 5 (lower is better)
Translates to: RAASRGCASALRPAA*RGKGSRGPTLRSPP
Trigger: CGGCGGAGAGCGAAGGGTTGGGCCTCGGCTGCCCTTCCCCCTGCAAGCGGCTGGACGAAGAGCTGAAGCGCAACCTCGAGACGCTGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp TCCTCGGGTCGTAAGCGAGGGCTTGGGGCTGTGGGCTCCAGGCCGTaGCCGCGGAGGTGGGCTTCAAGCTGCAGAGGCATAGGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: SSGRKRGLGAVGSRP*PRRWASSCRGIGGG
Trigger: CCCACCACCTATGCCTCTGCAGCTTGAAGCCCACCTCCGCGGCCACGGCCTGGAGCCCACAGCCCCAAGCCCTCGCTTACGACCCGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp GAGGCTCCAGACTCTCCTCGGGTCGTAAGCGAGGGCTTGGGGCTGTaGGCTCCAGGCCGTGGCCGCGGAGGTGGGCTTCAAGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: EAPDSPRVVSEGLGL*APGRGRGGGLQAAE
Trigger: CTCTGCAGCTTGAAGCCCACCTCCGCGGCCACGGCCTGGAGCCCACAGCCCCAAGCCCTCGCTTACGACCCGAGGAGAGTCTGGAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp GGTGGTGGCGGCGGCGGCGGCGGTGCTGACTGGTGTGGCCCGCTCTaGATCAGGCCCAGTGGCTCTGCATTGACTGTGGAGGGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: GGGGGGGGADWCGPL*IRPSGSALTVEGSS
Trigger: TGAGCTTCCCTCCACAGTCAATGCAGAGCCACTGGGCCTGATCCAGAGCGGGCCACACCAGTCAGCACCGCCGCCGCCGCCGCCACCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp TGGGTGGGAAGTCCGGGAGCTGCCGTAGACCAAGCTAGCTTTCGCTaGCCTCTCGTAACTCCATCCCGCCCCGGCGCCGAGCGGGTCCCC +
Preference number: 5 (lower is better)
Translates to: WVGSPGAAVDQASFR*PLVTPSRPGAERVP
Trigger: GGGGACCCGCTCGGCGCCGGGGCGGGATGGAGTTACGAGAGGTCAGCGAAAGCTAGCTTGGTCTACGGCAGCTCCCGGACTTCCCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp CGCACGGCCCCCTCTTCGGGGGAGCCTTCTCCAGTCTGCTCCACCTaGAGCTGTGGGAACGTGTGCAGGGCATCCTGCAGAGCTGGGCTC +
Preference number: 5 (lower is better)
Translates to: RTAPSSGEPSPVCST*SCGNVCRASCRAGL
Trigger: GAGCCCAGCTCTGCAGGATGCCCTGCACACGTTCCCACAGCTGCAGGTGGAGCAGACTGGAGAAGGCTCCCCCGAAGAGGGGGCCGTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp TCCCAGCGGCATAAGCAGCTGCAGGTCCACCCAGGCTCTGACACTTaGGTGTGGCGGTGGATCGAGGTGGCGGTGGCCTGGTGGCACCCC +
Preference number: 5 (lower is better)
Translates to: SQRHKQLQVHPGSDT*VWRWIEVAVAWWHP
Trigger: GGGGTGCCACCAGGCCACCGCCACCTCGATCCACCGCCACACCCAAGTGTCAGAGCCTGGGTGGACCTGCAGCTGCTTATGCCGCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp TCGAGGGCCTGGCTTTGGGCAGCCGGGAGGTGGTGGACTGTCCTGTaGCCAAGCTCCGGTCAGTCCGCATTTGCCGCCCACTGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SRAWLWAAGRWWTVL*PSSGQSAFAAHWWL
Trigger: GAGCCACCAGTGGGCGGCAAATGCGGACTGACCGGAGCTTGGCCACAGGACAGTCCACCACCTCCCGGCTGCCCAAAGCCAGGCCCTCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp CCCGTGTCTTCAGCAGCCGTCCTGGAACTGCCCGCTCATCCTCGCTaGGTGCGCCAGGGGAGGACTCGGAGTCTGATGAGCTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: PVSSAAVLELPAHPR*VRQGRTRSLMSCPQ
Trigger: CTGGGGGCAGCTCATCAGACTCCGAGTCCTCCCCTGGCGCACCCAGCGAGGATGAGCGGGCAGTTCCAGGACGGCTGCTGAAGACACGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp CCCACCACCTCCCAGAGAGCTGGGTCCCCAGCCGCCTCCGTGGCCTaGGAGAGCAGGGGAGTGACCAGTACTGTAGCTGAGGGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: PTTSQRAGSPAASVA*ESRGVTSTVAEGRA
Trigger: AGCCCTTCCCTCAGCTACAGTACTGGTCACTCCCCTGCTCTCTCAGGCCACGGAGGCGGCTGGGGACCCAGCTCTCTGGGAGGTGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp CCCAGCCCCACCAGCCCCAGAGGCTTTCCCAGCGGCATAAGCAGCTaGAGGTCCACCCAGGCTCTGACACTTGGGTGTGGCGGTGGATCG +
Preference number: 5 (lower is better)
Translates to: PSPTSPRGFPSGISS*RSTQALTLGCGGGS
Trigger: CGATCCACCGCCACACCCAAGTGTCAGAGCCTGGGTGGACCTGCAGCTGCTTATGCCGCTGGGAAAGCCTCTGGGGCTGGTGGGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp AGGCGGCTCCTCCGGTGTGGACGTGTCCTTAGGGCCTGTGAGGGGTaGGTCGTCCAGGGCCGAGATGGCGGAGGAAATGCTCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RRLLRCGRVLRACEG*VVQGRDGGGNALLQ
Trigger: CTGCAGGAGAGCATTTCCTCCGCCATCTCGGCCCTGGACGACCCACCCCTCACAGGCCCTAAGGACACGTCCACACCGGAGGAGCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp CTTGGCCAGGTGCAAAGGCCGAGCGTCTGGAGGTTCAGGGTCCTCTaGGGATGGGGCAGGAGGCTCCTCTGGAGGGGCAACTGGTGGGAC +
Preference number: 5 (lower is better)
Translates to: LGQVQRPSVWRFRVL*GWGRRLLWRGNWWD
Trigger: GTCCCACCAGTTGCCCCTCCAGAGGAGCCTCCTGCCCCATCCCCAGAGGACCCTGAACCTCCAGACGCTCGGCCTTTGCACCTGGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp CAGCCTTCACCTTCGAGGGCCTGGCTTTGGGCAGCCGGGAGGTGGTaGACTGTCCTGTGGCCAAGCTCCGGTCAGTCCGCATTTGCCGCC +
Preference number: 5 (lower is better)
Translates to: QPSPSRAWLWAAGRW*TVLWPSSGQSAFAA
Trigger: GGCGGCAAATGCGGACTGACCGGAGCTTGGCCACAGGACAGTCCACCACCTCCCGGCTGCCCAAAGCCAGGCCCTCGAAGGTGAAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp CTCCAGGGCCGAGATGAGGTTCATGACGGAGGCGTCGGGCCCTGCTaGGCCCGCGTGGTGGAGGCCAGTGTCAAAAAGTCCAGAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LQGRDEVHDGGVGPC*ARVVEASVKKSREA
Trigger: GGCCTCTCTGGACTTTTTGACACTGGCCTCCACCACGCGGGCTCAGCAGGGCCCGACGCCTCCGTCATGAACCTCATCTCGGCCCTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp GGAGGGCGGCCAGTAGCAGGCGGTGACTGGAGGGGTCGGATAATATaGGATGGGCTAGCCTCCCCACCACCTCCCAGAGAGCTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: GGRPVAGGDWRGRII*DGLASPPPPRELGP
Trigger: GGGACCCAGCTCTCTGGGAGGTGGTGGGGAGGCTAGCCCATCTCATATTATCCGACCCCTCCAGTCACCGCCTGCTACTGGCCGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp GGCTCCTGGAGAGCCAACGCCTGGAGGGCGGCCAGTAGCAGGCGGTaGCTGGAGGGGTCGGATAATATGAGATGGGCTAGCCTCCCCACC +
Preference number: 5 (lower is better)
Translates to: GSWRANAWRAASSRR*LEGSDNMRWASLPT
Trigger: GGTGGGGAGGCTAGCCCATCTCATATTATCCGACCCCTCCAGTCACCGCCTGCTACTGGCCGCCCTCCAGGCGTTGGCTCTCCAGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp AGCGGCATCGGCAGGACCATCCTCACCCACCAAGCCGTCTGCCCCTaGGGTCCGAGGTGGGCTAGGTGCCTGGAGCAGGTGCTGAATGAG +
Preference number: 5 (lower is better)
Translates to: SGIGRTILTHQAVCP*GPRWARCLEQVLNE
Trigger: CTCATTCAGCACCTGCTCCAGGCACCTAGCCCACCTCGGACCTCAGGGGCAGACGGCTTGGTGGGTGAGGATGGTCCTGCCGATGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp CCGCGGTGCCTTGGTCCCTTGAGGGCTGGGGCTTCTGTAGGCGCCTaGAGGATCTTTGCCCTCCGAGTTAGGTGGTCCCACACCAGGGTC +
Preference number: 5 (lower is better)
Translates to: PRCLGPLRAGASVGA*RIFALRVRWSHTRV
Trigger: GACCCTGGTGTGGGACCACCTAACTCGGAGGGCAAAGATCCTGCAGGCGCCTACAGAAGCCCCAGCCCTCAAGGGACCAAGGCACCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp GCTCAGCCTTCACCTTCGAGGGCCTGGCTTTGGGCAGCCGGGAGGTaGTGGACTGTCCTGTGGCCAAGCTCCGGTCAGTCCGCATTTGCC +
Preference number: 5 (lower is better)
Translates to: AQPSPSRAWLWAAGR*WTVLWPSSGQSAFA
Trigger: GGCAAATGCGGACTGACCGGAGCTTGGCCACAGGACAGTCCACCACCTCCCGGCTGCCCAAAGCCAGGCCCTCGAAGGTGAAGGCTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTTTGCCTTGGTGGGCTaGCGGCCACGGCGACGCGGG +
Preference number: 5 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSFALVG*RPRRRG
Trigger: CCCGCGTCGCCGTGGCCGCAAGCCCACCAAGGCAAA...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACTTCGAGGGCCTGGCTTaGGGCAGCCGGGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYFEGLA*GSREVV
Trigger: CACCACCTCCCGGCTGCCCAAAGCCAGGCCCTCGAA...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp CATCCTCGCTGGGTGCGCCAGGGGAGGACTCGGAGTCTGATGAGCTaGCCCCAGGACCATCACCGGCAGAGGCATTACCCACTGCTTCCT +
Preference number: 5 (lower is better)
Translates to: HPRWVRQGRTRSLMS*PQDHHRQRHYPLLP
Trigger: AGGAAGCAGTGGGTAATGCCTCTGCCGGTGATGGTCCTGGGGGCAGCTCATCAGACTCCGAGTCCTCCCCTGGCGCACCCAGCGAGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp ATGAGGTTCATGACGGAGGCGTCGGGCCCTGCTGAGCCCGCGTGGTaGAGGCCAGTGTCAAAAAGTCCAGAGAGGCCTGCAGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: MRFMTEASGPAEPAW*RPVSKSPERPAGWW
Trigger: CCACCACCCTGCAGGCCTCTCTGGACTTTTTGACACTGGCCTCCACCACGCGGGCTCAGCAGGGCCCGACGCCTCCGTCATGAACCTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp GAGATGAGGTTCATGACGGAGGCGTCGGGCCCTGCTGAGCCCGCGTaGTGGAGGCCAGTGTCAAAAAGTCCAGAGAGGCCTGCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: EMRFMTEASGPAEPA*WRPVSKSPERPAGW
Trigger: CCACCCTGCAGGCCTCTCTGGACTTTTTGACACTGGCCTCCACCACGCGGGCTCAGCAGGGCCCGACGCCTCCGTCATGAACCTCATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp CACCCGGAGAAGGTTCCCCACCTCCCAAAGGGCTGCAAGCCAAGCTaGCCCGGTGGCCCATTGAGGGATAGCTGCCTCCGCAGCTCAGAT +
Preference number: 5 (lower is better)
Translates to: HPEKVPHLPKGCKPS*PGGPLRDSCLRSSD
Trigger: ATCTGAGCTGCGGAGGCAGCTATCCCTCAATGGGCCACCGGGCCAGCTTGGCTTGCAGCCCTTTGGGAGGTGGGGAACCTTCTCCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp CAGGCCCTGACGGCAATGGTTCCAGAGCCCCGAGCAGTTCTTGCATaGCTCCAGGAGGCTCCAGACTCTCCTCGGGTCGTAAGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: QALTAMVPEPRAVLA*LQEAPDSPRVVSEG
Trigger: GCCCTCGCTTACGACCCGAGGAGAGTCTGGAGCCTCCTGGAGCCATGCAAGAACTGCTCGGGGCTCTGGAACCATTGCCGTCAGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp AGCAGGCCCCAAGACACCACCCCCTGCCAGGCGCTCGAAACCCAATaGCGAGGGCACTGTAGGTGCCTGGGAAGGCTTCAAGTGGAGCAC +
Preference number: 5 (lower is better)
Translates to: SRPQDTTPCQALETQ*RGHCRCLGRLQVEH
Trigger: GTGCTCCACTTGAAGCCTTCCCAGGCACCTACAGTGCCCTCGTCATTGGGTTTCGAGCGCCTGGCAGGGGGTGGTGTCTTGGGGCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp CCCACCTCCCAAAGGGCTGCAAGCCAAGCTGGCCCGGTGGCCCATTaGGGGATAGCTGCCTCCGCAGCTCAGATAGTGCTGCAGGGAATG +
Preference number: 5 (lower is better)
Translates to: PTSQRAASQAGPVAH*GIAASAAQIVLQGM
Trigger: CATTCCCTGCAGCACTATCTGAGCTGCGGAGGCAGCTATCCCTCAATGGGCCACCGGGCCAGCTTGGCTTGCAGCCCTTTGGGAGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp TTCCGTGCGCTCGGCGGCAGAACCACCAGGGCCGGCAAGCAGCTCTaGGCCATCACCTTTTCCCTTGTAGCCGCCTGCTCCAGCTGCATA +
Preference number: 5 (lower is better)
Translates to: FRALGGRTTRAGKQL*AITFSLVAACSSCI
Trigger: TATGCAGCTGGAGCAGGCGGCTACAAGGGAAAAGGTGATGGCTCAGAGCTGCTTGCCGGCCCTGGTGGTTCTGCCGCCGAGCGCACGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp AAGGGCTGCAAGCCAAGCTGGCCCGGTGGCCCATTGAGGGATAGCTaGCTCCGCAGCTCAGATAGTGCTGCAGGGAATGGGCTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: KGCKPSWPGGPLRDS*LRSSDSAAGNGLVV
Trigger: CACCACCAGCCCATTCCCTGCAGCACTATCTGAGCTGCGGAGGCAGCTATCCCTCAATGGGCCACCGGGCCAGCTTGGCTTGCAGCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp TCCCCAGGCCCTGACGGCAATGGTTCCAGAGCCCCGAGCAGTTCTTaGATGGCTCCAGGAGGCTCCAGACTCTCCTCGGGTCGTAAGCGA +
Preference number: 5 (lower is better)
Translates to: SPGPDGNGSRAPSSS*MAPGGSRLSSGRKR
Trigger: TCGCTTACGACCCGAGGAGAGTCTGGAGCCTCCTGGAGCCATGCAAGAACTGCTCGGGGCTCTGGAACCATTGCCGTCAGGGCCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp CTGGTAGGCAGACAGGGCAGAGGAAGACGGGAAGGTGCTGGAACCTaGGAGGGCACCAGAGATGAAGAGTTCCGTGGGGCCCGGTGTGTG +
Preference number: 5 (lower is better)
Translates to: LVGRQGRGRREGAGT*EGTRDEEFRGARCV
Trigger: CACACACCGGGCCCCACGGAACTCTTCATCTCTGGTGCCCTCCCAGGTTCCAGCACCTTCCCGTCTTCCTCTGCCCTGTCTGCCTACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp AGGCTCCCAGCTCCTTGGCACCGGCTCCATAGTGAACGACTGAGGTaGCTAGTCCCTCGGGAGTTTCGCCACCCCGTTCTGGCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: RLPAPWHRLHSERLR*LVPREFRHPVLAPS
Trigger: AGAAGGGGCCAGAACGGGGTGGCGAAACTCCCGAGGGACTAGCCACCTCAGTCGTTCACTATGGAGCCGGTGCCAAGGAGCTGGGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp CCTCCTCATCCGTCTCCCCACACACCGCTGCCGTCTCTTGCTTCTTaGCCAGGTGCAAAGGCCGAGCGTCTGGAGGTTCAGGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PPHPSPHTPLPSLAS*PGAKAERLEVQGPL
Trigger: CAGAGGACCCTGAACCTCCAGACGCTCGGCCTTTGCACCTGGCCAAGAAGCAAGAGACGGCAGCGGTGTGTGGGGAGACGGATGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp ACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCACCGCCGCAGACAGAGCACTCGCTTCTTTGGCTTGGTaGAACAGAAGATGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: TDPCSRCPGLPTAADRALASLAW*NRRWAR
Trigger: CCTCGCCCATCTTCTGTTCAACCAAGCCAAAGAAGC...GAGTGCTCTGTCTGCGGCGGTGGGTAGGCCTGGGCAGCGGGAGCAAGGGTCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp TCTGCCCCTGAGGTCCGAGGTGGGCTAGGTGCCTGGAGCAGGTGCTaGATGAGAAACTCTTCGTCTTCCGTGCGCTCGGCGGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: SAPEVRGGLGAWSRC*MRNSSSSVRSAAEP
Trigger: TGGTTCTGCCGCCGAGCGCACGGAAGACGAAGAGTTTCTCATTCAGCACCTGCTCCAGGCACCTAGCCCACCTCGGACCTCAGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp CAGAGTCTTCTTCATCCGAGGAGAAGGAGGGCAGCGTCTCGAGGTTaGGCTTCAGCTCTTCGTCCAGCCGCTTGCAGGGGGAAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: QSLLHPRRRRAASRG*ASALRPAACRGKGS
Trigger: GCTGCCCTTCCCCCTGCAAGCGGCTGGACGAAGAGCTGAAGCGCAACCTCGAGACGCTGCCCTCCTTCTCCTCGGATGAAGAAGACTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGGGCGTGCCACTGCTGTaGCTGCTGGGCAGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEGVPLL*LLGRLG
Trigger: CCCAAGCCTGCCCAGCAGCAACAGCAGTGGCACGCC...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp TGGCCATCCTTGATCTCTGGAGTGAATTTCTGCAGAAGGGCCTTCTaGACACGCCAGATGGGTGGGGGCTCCCGGCCAGTCTGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: WPSLISGVNFCRRAF*TRQMGGGSRPVCRA
Trigger: GGCCCTGCAGACTGGCCGGGAGCCCCCACCCATCTGGCGTGTTCAGAAGGCCCTTCTGCAGAAATTCACTCCAGAGATCAAGGATGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp CTGCGGAGGACCCCCAGAATAGCTAGGGCCTTTGCTCAAGTCCTGTaGTTGACCCCCTCCAAATCCTTGCCCGTAGGCTTGAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LRRTPRIARAFAQVL*LTPSKSLPVGLRAQ
Trigger: CTGGGCCCTCAAGCCTACGGGCAAGGATTTGGAGGGGGTCAAGCACAGGACTTGAGCAAAGGCCCTAGCTATTCTGGGGGTCCTCCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp TGGAGTGAATTTCTGCAGAAGGGCCTTCTGAACACGCCAGATGGGTaGGGGCTCCCGGCCAGTCTGCAGGGCCAGCTTGAGGGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: WSEFLQKGLLNTPDG*GLPASLQGQLEGGY
Trigger: ATACCCTCCCTCAAGCTGGCCCTGCAGACTGGCCGGGAGCCCCCACCCATCTGGCGTGTTCAGAAGGCCCTTCTGCAGAAATTCACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CTAAGAGGGCTTCACGGTTCTTCACCGACCCTTGCTCCCGCTGCCCAGGCCTACCCCGAGATGACATCATaGGAAGGTGCTCCCAGACCC +
Preference number: 5 (lower is better)
Translates to: LRGLHGSSPTLAPAAQAYPEMTS*EGAPRP
Trigger: GGGTCTGGGAGCACCTTCCAATGATGTCATCTCGGG...GTAGGCCTGGGCAGCGGGAGCAAGGGTCGGTGAAGAACCGTGAAGCCCTCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CCCTCCCACCCAACACCACACGCCCTCGGGGAGCAGCCTTTAGCAAAGATGTTGTTCTCCCGGGTCAGGTaGGAGTCCAGGCTGTTGTGG +
Preference number: 5 (lower is better)
Translates to: PSHPTPHALGEQPLAKMLFSRVR*ESRLLW
Trigger: CCACAACAGCCTGGACTCCAACCTGACCCGGGAGAA...CAACATCTTTGCTAAAGGCTGCTCCCCGAGGGCGTGTGGTGTTGGGTGGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp CATGCGTGTCCTCCAGGGCCTGGATCATGTCTGGGTCCAGGGCTGTaGTCACCAGCATCTCCACATAGCTCCTGTACATCTCCCGCATGG +
Preference number: 5 (lower is better)
Translates to: HACPPGPGSCLGPGL*SPASPHSSCTSPAW
Trigger: CCATGCGGGAGATGTACAGGAGCTATGTGGAGATGCTGGTGAGCACAGCCCTGGACCCAGACATGATCCAGGCCCTGGAGGACACGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp GTAAGGCTCACTCTGTACCCCATAGAGCTGACCCTGAAGCTGGTCTaGAGAGTAACTCTGACAGGTAGCCAGGCCAGGAGGCGGGGGACC +
Preference number: 5 (lower is better)
Translates to: VRLTLYPIELTLKLV*RVTLTGSQARRRGT
Trigger: GGTCCCCCGCCTCCTGGCCTGGCTACCTGTCAGAGTTACTCTCCAGACCAGCTTCAGGGTCAGCTCTATGGGGTACAGAGTGAGCCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp AGGCTTCTCCGATGTCATCTTCTCAGGGGTCTCAGGCTTGGGAGGTaGCGCTTGGACCTTAGACGGAGGTGCAGAGTTGCCCCCAACAGG +
Preference number: 5 (lower is better)
Translates to: RLLRCHLLRGLRLGR*RLDLRRRCRVAPNR
Trigger: CCTGTTGGGGGCAACTCTGCACCTCCGTCTAAGGTCCAAGCGCCACCTCCCAAGCCTGAGACCCCTGAGAAGATGACATCGGAGAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp CTGTGCTCACCAGCATCTCCACATAGCTCCTGTACATCTCCCGCATaGCCCGTGTCTTCAGCAGCCGTCCTGGAACTGCCCGCTCATCCT +
Preference number: 5 (lower is better)
Translates to: LCSPASPHSSCTSPA*PVSSAAVLELPAHP
Trigger: AGGATGAGCGGGCAGTTCCAGGACGGCTGCTGAAGACACGGGCCATGCGGGAGATGTACAGGAGCTATGTGGAGATGCTGGTGAGCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp CCCGGGTCAGGTTGGAGTCCAGGCTGTTGTGGTCTACACCCGAGATaGCATCATTGGAAGGTGCTCCCAGACCCTCACCAGCTTTGGGCA +
Preference number: 5 (lower is better)
Translates to: PGSGWSPGCCGLHPR*HHWKVLPDPHQLWA
Trigger: TGCCCAAAGCTGGTGAGGGTCTGGGAGCACCTTCCAATGATGTCATCTCGGGTGTAGACCACAACAGCCTGGACTCCAACCTGACCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp CAGCACCAGTCTTGGGGTCTCCATCATCTTCGGTCTGTCCGGCCTTaGCATAGTCATCGGCTGCCCCTCCACCAAACATCTCCTCCATGG +
Preference number: 5 (lower is better)
Translates to: QHQSWGLHHLRSVRP*HSHRLPLHQTSPPW
Trigger: CCATGGAGGAGATGTTTGGTGGAGGGGCAGCCGATGACTATGGCAAGGCCGGACAGACCGAAGATGATGGAGACCCCAAGACTGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp GGGCCGAGATGGCGGAGGAAATGCTCTCCTGCAGGTCTCTGTTCTTaGCCACAGAGTCTTCTTCATCCGAGGAGAAGGAGGGCAGCGTCT +
Preference number: 5 (lower is better)
Translates to: GPRWRRKCSPAGLCS*PQSLLHPRRRRAAS
Trigger: AGACGCTGCCCTCCTTCTCCTCGGATGAAGAAGACTCTGTGGCCAAGAACAGAGACCTGCAGGAGAGCATTTCCTCCGCCATCTCGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp AGGGATCATAAGCAGTGGGACCAGGGGGTGGACCAGCACCAGTCTTaGGGTCTCCATCATCTTCGGTCTGTCCGGCCTTGCCATAGTCAT +
Preference number: 5 (lower is better)
Translates to: RDHKQWDQGVDQHQS*GLHHLRSVRPCHSH
Trigger: ATGACTATGGCAAGGCCGGACAGACCGAAGATGATGGAGACCCCAAGACTGGTGCTGGTCCACCCCCTGGTCCCACTGCTTATGATCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp TCCACAGTAGGGTCCATAGGGATCATAAGCAGTGGGACCAGGGGGTaGACCAGCACCAGTCTTGGGGTCTCCATCATCTTCGGTCTGTCC +
Preference number: 5 (lower is better)
Translates to: STVGSIGIISSGTRG*TSTSLGVSIIFGLS
Trigger: GGACAGACCGAAGATGATGGAGACCCCAAGACTGGTGCTGGTCCACCCCCTGGTCCCACTGCTTATGATCCCTATGGACCCTACTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp TTGGCCTCGATCTTCTCCCGGGTCAGGTTGGAGTCCAGGCTGTTGTaGTCTACACCCGAGATGACATCATTGGAAGGTGCTCCCAGACCC +
Preference number: 5 (lower is better)
Translates to: LASIFSRVRLESRLL*STPEMTSLEGAPRP
Trigger: GGGTCTGGGAGCACCTTCCAATGATGTCATCTCGGGTGTAGACCACAACAGCCTGGACTCCAACCTGACCCGGGAGAAGATCGAGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTACCGAACTTAAGTATTaGCCAGGGGCTCCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPTELKY*PGAPGE
Trigger: CTCTCCAGGAGCCCCTGGCAAATACTTAAGTTCGGT...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTGCCGCTTGCCTGACTaGAGAAAGTCAAGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSCRLPD*RKSRKD
Trigger: GTCCTTCCTTGACTTTCTCAAGTCAGGCAAGCGGCA...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTTCTCCAGCTCCACCTaGAATTCCTGGGCCCGCACA +
Preference number: 5 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEFSSST*NSWART
Trigger: TGTGCGGGCCCAGGAATTCAAGGTGGAGCTGGAGAA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp GCCGTGGCACCCTCATCCAGACTGGCACTAGTCCGGATGACGCTCTaGAGGTGGTACCTCTGGGGATCTTCCTTGGCTAATTCATATGGT +
Preference number: 5 (lower is better)
Translates to: AVAPSSRLALVRMTL*RWYLWGSSLANSYG
Trigger: ACCATATGAATTAGCCAAGGAAGATCCCCAGAGGTACCACCTGCAGAGCGTCATCCGGACTAGTGCCAGTCTGGATGAGGGTGCCACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp TCCAGACTGGCACTAGTCCGGATGACGCTCTGCAGGTGGTACCTCTaGGGATCTTCCTTGGCTAATTCATATGGTGTGCCTGGCGCTCCT +
Preference number: 5 (lower is better)
Translates to: SRLALVRMTLCRWYL*GSSLANSYGVPGAP
Trigger: AGGAGCGCCAGGCACACCATATGAATTAGCCAAGGAAGATCCCCAGAGGTACCACCTGCAGAGCGTCATCCGGACTAGTGCCAGTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTTTGGGCACAGACAGCTaGATCTTAAGTGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VSSGGQLCPVLSPRRRCPLGTDS*ILSGFR
Trigger: CCTGAAGCCACTTAAGATCAAGCTGTCTGTGCCCAA...AGGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp TTTGTTGTGATCCAGACCCAGGCCTGGAGTCTCTGGTCCAGTTCCTaGTGCCCGGCCTCCACAGTAGGGTCCATAGGGATCATAAGCAGT +
Preference number: 5 (lower is better)
Translates to: FVVIQTQAWSLWSSS*CPASTVGSIGIISS
Trigger: ACTGCTTATGATCCCTATGGACCCTACTGTGGAGGCCGGGCATCAGGAACTGGACCAGAGACTCCAGGCCTGGGTCTGGATCACAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp GCACCCTCATCCAGACTGGCACTAGTCCGGATGACGCTCTGCAGGTaGTACCTCTGGGGATCTTCCTTGGCTAATTCATATGGTGTGCCT +
Preference number: 5 (lower is better)
Translates to: APSSRLALVRMTLCR*YLWGSSLANSYGVP
Trigger: AGGCACACCATATGAATTAGCCAAGGAAGATCCCCAGAGGTACCACCTGCAGAGCGTCATCCGGACTAGTGCCAGTCTGGATGAGGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGTGGCCCGGTGGCCCATaGAGGGATAGCTGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAWPGGP*RDSCLR
Trigger: GCGGAGGCAGCTATCCCTCAATGGGCCACCGGGCCA...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGGGCGCTGGCTGGGTaGCCTGGGCCGAGGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRGALAG*PGPRVV
Trigger: CACCACCCTCGGCCCAGGCAACCCAGCCAGCGCCCC...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 90 bp GTCCAGGCTGTTGTGGTCTACACCCGAGATGACATCATTGGAAGGTaGTCCCAGACCCTCACCAGCTTTGGGCACAGACAGCTTGATCTT +
Preference number: 5 (lower is better)
Translates to: VQAVVVYTRDDIIGR*SQTLTSFGHRQLDL
Trigger: AAGATCAAGCTGTCTGTGCCCAAAGCTGGTGAGGGTCTGGGAGCACCTTCCAATGATGTCATCTCGGGTGTAGACCACAACAGCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 90 bp AAGATAGAGTTCATCATGCGTGTCCTCCAGGGCCTGGATCATGTCTaGGTCCAGGGCTGTGCTCACCAGCATCTCCACATAGCTCCTGTA +
Preference number: 5 (lower is better)
Translates to: KIEFIMRVLQGLDHV*VQGCAHQHLHIAPV
Trigger: TACAGGAGCTATGTGGAGATGCTGGTGAGCACAGCCCTGGACCCAGACATGATCCAGGCCCTGGAGGACACGCATGATGAACTCTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCATCCTTGCCCGTAGGCTaGAGGGCCCAGAAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: VVCTQCIQGELYSARERASLPVG*RAQKPL
Trigger: CAAGGGCTTCTGGGCCCTCAAGCCTACGGGCAAGGA...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp AGTCAGCTCTGGAGGACAGCTCTGTCCAGTTCTCAGTCCGCGGAGGAGGTGTCCTCTTCAGCAGCTTCTTaGGCTTGGTTGAACAGAAGA +
Preference number: 5 (lower is better)
Translates to: SQLWRTALSSSQSAEEVSSSAAS*AWLNRR
Trigger: TCTTCTGTTCAACCAAGCCAAAGAAGCTGCTGAAGA...GGACACCTCCTCCGCGGACTGAGAACTGGACAGAGCTGTCCTCCAGAGCTGACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTGCAGGTCTCTGTTCTaGGCCACAGAGTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEECRSLF*ATESSS
Trigger: TGAAGAAGACTCTGTGGCCAAGAACAGAGACCTGCA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGACCCCCTCCAAATCCTaGCCCGTAGGCTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTATPSKS*PVGLRA
Trigger: GGCCCTCAAGCCTACGGGCAAGGATTTGGAGGGGGT...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCGGTGCCTTGGTCCCTaGAGGGCTGGGGCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTARCLGP*RAGASV
Trigger: TACAGAAGCCCCAGCCCTCAAGGGACCAAGGCACCG...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGGAGGTGAGGCCACCCTaGGGCTCAGAGACAGGTGGT +
Preference number: 5 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAEVRPP*GSETGG
Trigger: ACCACCTGTCTCTGAGCCCAAGGGTGGCCTCACCTC...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCACACCGCTGCCGTCTCTaGCTTCTTGGCCAGGTGCAA +
Preference number: 5 (lower is better)
Translates to: VVCTQCIQGELYSARERAHRCRL*LLGQVQ
Trigger: TTGCACCTGGCCAAGAAGCAAGAGACGGCAGCGGTG...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 90 bp CTGGGCTCAGTGACAGCCGCTTCAGGACCTTTTTCTTGTGCTCATTaGGGAGGCCGTCAATCTTCCGCATGGGTGGAAGATAGAGTTCAT +
Preference number: 5 (lower is better)
Translates to: LGSVTAASGPFSCAH*GGRQSSAWVEDRVH
Trigger: ATGAACTCTATCTTCCACCCATGCGGAAGATTGACGGCCTCCTCAATGAGCACAAGAAAAAGGTCCTGAAGCGGCTGTCACTGAGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGTCGTAAGCGAGGGCTaGGGGCTGTGGGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRVVSEG*GLWAPG
Trigger: GCCTGGAGCCCACAGCCCCAAGCCCTCGCTTACGAC...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGGCGCCTGCAGGATCTTaGCCCTCCGAGTTAGGTGGT +
Preference number: 5 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAAPAGS*PSELGG
Trigger: ACCACCTAACTCGGAGGGCAAAGATCCTGCAGGCGC...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGCCATCGCGCTTTGCCTaGGTGGGCTTGCGGCCACGG +
Preference number: 5 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRPSRFA*VGLRPR
Trigger: CCGTGGCCGCAAGCCCACCAAGGCAAAGCGCGATGG...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCTGGCGTCAGGCCAGCTaGGTAGAGTGGTGGGTGCCG +
Preference number: 5 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGWRQAS*VEWWVP
Trigger: CGGCACCCACCACTCTACCAAGCTGGCCTGACGCCA...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGGCTGGTACCGGTTTTTaGCATCTCCAAAATAACCCA +
Preference number: 5 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEAGTGF*HLQNNP
Trigger: TGGGTTATTTTGGAGATGCAAAAAACCGGTACCAGC...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTGAGTTGTACAGCGCCCGAGAAAGAGCAGGAGGTCAAGGTGAGGTGGGAAGAGTTTTTCTTGTGCTCATaGAGGAGGCCGTCAATCTTC +
Preference number: 5 (lower is better)
Translates to: VSCTAPEKEQEVKVRWEEFFLCS*RRPSIF
Trigger: GAAGATTGACGGCCTCCTCAATGAGCACAAGAAAAA...CTCTTCCCACCTCACCTTGACCTCCTGCTCTTTCTCGGGCGCTGTACAACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCAGCCCCGAGCAGTTCTaGCATGGCTCCAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGSPEQF*HGSRRL
Trigger: GAGCCTCCTGGAGCCATGCAAGAACTGCTCGGGGCT...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTTTCGTTTGGCTGGTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCAGTGGCTCTGCATaGACTGTGGAGGGAAGCTCA +
Preference number: 5 (lower is better)
Translates to: VSFGWLCVHSVYKVSCTAPSGSA*TVEGSS
Trigger: TGAGCTTCCCTCCACAGTCAATGCAGAGCCACTGGG...CGCTGTACAACTCACCTTGTATACACTGTGTACACACAACCAGCCAAACGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCAAGACCCTCACCAGCTTaGGGCACAGACAGCTTGATC +
Preference number: 5 (lower is better)
Translates to: VVCTQCIQGELYSARERARPSPA*GTDSLI
Trigger: GATCAAGCTGTCTGTGCCCAAAGCTGGTGAGGGTCT...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp GTTGTGTGTACACAGTGTATACAAGGTGAGTTGTACAGCGCCCGAGAAAGAGCAAGTGGTGGGTGCCGCTaGCCTGACTTGAGAAAGTCA +
Preference number: 5 (lower is better)
Translates to: VVCTQCIQGELYSARERASGGCR*PDLRKS
Trigger: TGACTTTCTCAAGTCAGGCAAGCGGCACCCACCACT...TGCTCTTTCTCGGGCGCTGTACAACTCACCTTGTATACACTGTGTACACACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCGGCAGCGTCTCGAGGTaGCGCTTCAGCTCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGGSVSR*RFSSSS
Trigger: GGACGAAGAGCTGAAGCGCAACCTCGAGACGCTGCC...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGTCAGGGGTCTCAGGCTaGGGAGGTGGCGCTTGGACC +
Preference number: 5 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRSGVSG*GGGAWT
Trigger: GGTCCAAGCGCCACCTCCCAAGCCTGAGACCCCTGA...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGCGGCCCCGAGGTTTCTaGGCCCCATCAGTGGTTATG +
Preference number: 5 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWRPRGF*APSVVM
Trigger: CATAACCACTGATGGGGCCAAGAAACCTCGGGGCCG...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCGCCGTCTCTTGCTTCTaGGCCAGGTGCAAAGGCCGA +
Preference number: 5 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGAVSCF*ARCKGR
Trigger: TCGGCCTTTGCACCTGGCCAAGAAGCAAGAGACGGC...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCGTCTGCAGGGCCAGCTaGAGGGAGGGTATGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGVCRAS*REGMSS
Trigger: AGAGGACATACCCTCCCTCAAGCTGGCCCTGCAGAC...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGCTTGGGAGGTGGCGCTaGGACCTTAGACGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRLGRWR*DLRRRC
Trigger: GCACCTCCGTCTAAGGTCCAAGCGCCACCTCCCAAG...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCGCTATGGGCCTGTGCTaGGGCCAGCAGGTCACTGAA +
Preference number: 5 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGAMGLC*GQQVTE
Trigger: TTCAGTGACCTGCTGGCCCAAGCACAGGCCCATAGC...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGTCTGGCCCCTTCTTCTaGTCCTTCATCCTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRSGPFF*SFILPR
Trigger: CCTGGGGAGGATGAAGGACAAGAAGAAGGGGCCAGA...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGGGCCCGTCAGGACCAGGGTaGGGTGGGCAAAAGTCTATA +
Preference number: 5 (lower is better)
Translates to: LPQPYIEFSYTLCTWWRGPSGPG*GGQKSI
Trigger: TATAGACTTTTGCCCACCCAACCCTGGTCCTGACGG...GCCCCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGTTGGAGTCCAGGCTGTaGTGGTCTACACCCGAGATG +
Preference number: 5 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRLESRL*WSTPEM
Trigger: CATCTCGGGTGTAGACCACAACAGCCTGGACTCCAA...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGTCTACCTCCTTGATCTaGGCCTCGATCTTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRSTSLI*ASIFSR
Trigger: CCGGGAGAAGATCGAGGCCAAGATCAAGGAGGTAGA...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGTGCCTCTGGCCATCCTaGATCTCTGGAGTGAATTTC +
Preference number: 5 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWCLWPS*ISGVNF
Trigger: GAAATTCACTCCAGAGATCAAGGATGGCCAGAGGCA...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp TGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGAGGAGCAGCTTCTTTGGCTaGGTTGAACAGAAGATGGGC +
Preference number: 5 (lower is better)
Translates to: CLPQPYIEFSYTLCTWWRSSFFG*VEQKMG
Trigger: GCCCATCTTCTGTTCAACCAAGCCAAAGAAGCTGCT...CCTCCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS-3UTR CAA 90 bp CCCTGCCTCCCTCAACCATACATAGAATTTTCCTATACATTATGTACATGGTGGCGCACAACACTTCTCTaGAGCTTGCTGAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: PCLPQPYIEFSYTLCTWWRTTLL*SLLSVF
Trigger: AAAGACACTCAGCAAGCTCAAGAGAAGTGTTGTGCG...CCACCATGTACATAATGTATAGGAAAATTCTATGTATGGTTGAGGGAGGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GGGCGAGGTGAGGCCACCCTTGGGCTCAGAGACAGGTaGTGGTGGCGGTGGTGGCGGCGGCGGCGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: GRGEATLGLRDR*WWRWWRRRRRC
Trigger: GCACCGCCGCCGCCGCCGCCACCACCGCCACCACCACCTGTCTCTGAGCCCAAGGGTGGCCTCACCTCGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GGTGGCGGTGGTGGCGGCGGCGGCGGCGGTGCTGACTaGTGTGGCCCGCTCTGGATCAGGCCCAGTGGCTCT +
Preference number: 6 (lower is better)
Translates to: GGGGGGGGGGAD*CGPLWIRPSGS
Trigger: AGAGCCACTGGGCCTGATCCAGAGCGGGCCACACCAGTCAGCACCGCCGCCGCCGCCGCCACCACCGCCACC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp CCCTGGGTCGGGGAGGGCCATCGCGCTTTGCCTTGGTaGGCTTGCGGCCACGGCGACGCGGGCCGTCAGGAC +
Preference number: 6 (lower is better)
Translates to: PWVGEGHRALPW*ACGHGDAGRQD
Trigger: GTCCTGACGGCCCGCGTCGCCGTGGCCGCAAGCCCACCAAGGCAAAGCGCGATGGCCCTCCCCGACCCAGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp TCCCCCTGGGTCGGGGAGGGCCATCGCGCTTTGCCTTaGTGGGCTTGCGGCCACGGCGACGCGGGCCGTCAG +
Preference number: 6 (lower is better)
Translates to: SPWVGEGHRALP*WACGHGDAGRQ
Trigger: CTGACGGCCCGCGTCGCCGTGGCCGCAAGCCCACCAAGGCAAAGCGCGATGGCCCTCCCCGACCCAGGGGGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp GGTCGGGGAGGGCCATCGCGCTTTGCCTTGGTGGGCTaGCGGCCACGGCGACGCGGGCCGTCAGGACCAGGG +
Preference number: 6 (lower is better)
Translates to: GRGGPSRFALVG*RPRRRGPSGPG
Trigger: CCCTGGTCCTGACGGCCCGCGTCGCCGTGGCCGCAAGCCCACCAAGGCAAAGCGCGATGGCCCTCCCCGACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp CTCCCCCTGGGTCGGGGAGGGCCATCGCGCTTTGCCTaGGTGGGCTTGCGGCCACGGCGACGCGGGCCGTCA +
Preference number: 6 (lower is better)
Translates to: LPLGRGGPSRFA*VGLRPRRRGPS
Trigger: TGACGGCCCGCGTCGCCGTGGCCGCAAGCCCACCAAGGCAAAGCGCGATGGCCCTCCCCGACCCAGGGGGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GACCGTGTCCTGTCGGGGCAGGGCCCGCTCCGGCGGTaGACCGGGGGCAGCACCCGAGAAGTTGTAGAGCTG +
Preference number: 6 (lower is better)
Translates to: DRVLSGQGPLRR*TGGSTREVVEL
Trigger: CAGCTCTACAACTTCTCGGGTGCTGCCCCCGGTCCACCGCCGGAGCGGGCCCTGCCCCGACAGGACACGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp CAGGGCCCTCCAGTGGACGAATCCTGGGCCTCCCCCTaGGTCGGGGAGGGCCATCGCGCTTTGCCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: QGPPVDESWASP*VGEGHRALPWW
Trigger: CCACCAAGGCAAAGCGCGATGGCCCTCCCCGACCCAGGGGGAGGCCCAGGATTCGTCCACTGGAGGGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp GAGGGCAGCGTCTCGAGGTTGCGCTTCAGCTCTTCGTCCAGCCGCTaGCAGGGGGAAGGGCAGCCGAGGCCCAACCCTTCGCTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: EGSVSRLRFSSSSSR*QGEGQPRPNPSLSA
Trigger: GGCGGAGAGCGAAGGGTTGGGCCTCGGCTGCCCTTCCCCCTGCAAGCGGCTGGACGAAGAGCTGAAGCGCAACCTCGAGACGCTGCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp TCCCCCAGCAGTCTCCGGGCCTGTAGCCCGGCCAGCTaGTCCAGCTGTGGCTCCACTAGGCCCACCCTTGCT +
Preference number: 6 (lower is better)
Translates to: SPSSLRACSPAS*SSCGSTRPTLA
Trigger: AGCAAGGGTGGGCCTAGTGGAGCCACAGCTGGAGCAGCTGGCCGGGCTACAGGCCCGGAGACTGCTGGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp GCTTCTCCTCCAGCAGTGGGGGCTCCGGCGTGCCACTaGTGTTGCTGCTGGGCAGGCTTGGGAGAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: ASPPAVGAPACH*CCCWAGLGEGV
Trigger: CACCCCCTCTCCCAAGCCTGCCCAGCAGCAACAGCAGTGGCACGCCGGAGCCCCCACTGCTGGAGGAGAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp GTGGGGGCTTCTCCTCCAGCAGTGGGGGCTCCGGCGTaGCACTGCTGTTGCTGCTGGGCAGGCTTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: VGASPPAVGAPA*HCCCCWAGLGE
Trigger: CTCTCCCAAGCCTGCCCAGCAGCAACAGCAGTGGCACGCCGGAGCCCCCACTGCTGGAGGAGAAGCCCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp CCGCATGGCCCGTGTCTTCAGCAGCCGTCCTGGAACTaGCCGCTCATCCTCGCTGGGTGCGCCAGGGGAGGA +
Preference number: 6 (lower is better)
Translates to: PHGPCLQQPSWN*PLILAGCARGG
Trigger: TCCTCCCCTGGCGCACCCAGCGAGGATGAGCGGGCAGTTCCAGGACGGCTGCTGAAGACACGGGCCATGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GGAAGGTCAGGACCTCCAGCCTCCAAGAGGAGGCCATaGGGCGCTGGCTGGGTTGCCTGGGCCGAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: GRSGPPASKRRP*GAGWVAWAEGG
Trigger: ACCACCCTCGGCCCAGGCAACCCAGCCAGCGCCCCATGGCCTCCTCTTGGAGGCTGGAGGTCCTGACCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp GGCAGGACCATCCTCACCCACCAAGCCGTCTGCCCCTaGGGTCCGAGGTGGGCTAGGTGCCTGGAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: GRTILTHQAVCP*GPRWARCLEQV
Trigger: CACCTGCTCCAGGCACCTAGCCCACCTCGGACCTCAGGGGCAGACGGCTTGGTGGGTGAGGATGGTCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp CGCACGGCCCCCTCTTCGGGGGAGCCTTCTCCAGTCTaGTCCACCTGCAGCTGTGGGAACGTGTGCAGGGCA +
Preference number: 6 (lower is better)
Translates to: RTAPSSGEPSPV*STCSCGNVCRA
Trigger: TGCCCTGCACACGTTCCCACAGCTGCAGGTGGAGCAGACTGGAGAAGGCTCCCCCGAAGAGGGGGCCGTGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp CCTTCGAGGGCCTGGCTTTGGGCAGCCGGGAGGTGGTaGACTGTCCTGTGGCCAAGCTCCGGTCAGTCCGCA +
Preference number: 6 (lower is better)
Translates to: PSRAWLWAAGRW*TVLWPSSGQSA
Trigger: TGCGGACTGACCGGAGCTTGGCCACAGGACAGTCCACCACCTCCCGGCTGCCCAAAGCCAGGCCCTCGAAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp GGAGGTGGCTCAGCCTTCACCTTCGAGGGCCTGGCTTaGGGCAGCCGGGAGGTGGTGGACTGTCCTGTGGCC +
Preference number: 6 (lower is better)
Translates to: GGGSAFTFEGLA*GSREVVDCPVA
Trigger: GGCCACAGGACAGTCCACCACCTCCCGGCTGCCCAAAGCCAGGCCCTCGAAGGTGAAGGCTGAGCCACCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp TGGCTTTGGGCAGCCGGGAGGTGGTGGACTGTCCTGTaGCCAAGCTCCGGTCAGTCCGCATTTGCCGCCCAC +
Preference number: 6 (lower is better)
Translates to: WLWAAGRWWTVL*PSSGQSAFAAH
Trigger: GTGGGCGGCAAATGCGGACTGACCGGAGCTTGGCCACAGGACAGTCCACCACCTCCCGGCTGCCCAAAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp TCACCTTCGAGGGCCTGGCTTTGGGCAGCCGGGAGGTaGTGGACTGTCCTGTGGCCAAGCTCCGGTCAGTCC +
Preference number: 6 (lower is better)
Translates to: SPSRAWLWAAGR*WTVLWPSSGQS
Trigger: GGACTGACCGGAGCTTGGCCACAGGACAGTCCACCACCTCCCGGCTGCCCAAAGCCAGGCCCTCGAAGGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GAGGTGGCTCAGCCTTCACCTTCGAGGGCCTGGCTTTaGGCAGCCGGGAGGTGGTGGACTGTCCTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: EVAQPSPSRAWL*AAGRWWTVLWP
Trigger: TGGCCACAGGACAGTCCACCACCTCCCGGCTGCCCAAAGCCAGGCCCTCGAAGGTGAAGGCTGAGCCACCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp TCAGCAGCCGTCCTGGAACTGCCCGCTCATCCTCGCTaGGTGCGCCAGGGGAGGACTCGGAGTCTGATGAGC +
Preference number: 6 (lower is better)
Translates to: SAAVLELPAHPR*VRQGRTRSLMS
Trigger: GCTCATCAGACTCCGAGTCCTCCCCTGGCGCACCCAGCGAGGATGAGCGGGCAGTTCCAGGACGGCTGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp AGTCCGGGAGCTGCCGTAGACCAAGCTAGCTTTCGCTaGCCTCTCGTAACTCCATCCCGCCCCGGCGCCGAG +
Preference number: 6 (lower is better)
Translates to: SPGAAVDQASFR*PLVTPSRPGAE
Trigger: CTCGGCGCCGGGGCGGGATGGAGTTACGAGAGGTCAGCGAAAGCTAGCTTGGTCTACGGCAGCTCCCGGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp CTCGGCGGCAGAACCACCAGGGCCGGCAAGCAGCTCTaGGCCATCACCTTTTCCCTTGTAGCCGCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LGGRTTRAGKQL*AITFSLVAACS
Trigger: GGAGCAGGCGGCTACAAGGGAAAAGGTGATGGCTCAGAGCTGCTTGCCGGCCCTGGTGGTTCTGCCGCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp CAGCACCCGGAGAAGGTTCCCCACCTCCCAAAGGGCTaGAAGCCAAGCTGGCCCGGTGGCCCATTGAGGGAT +
Preference number: 6 (lower is better)
Translates to: QHPEKVPHLPKG*KPSWPGGPLRD
Trigger: ATCCCTCAATGGGCCACCGGGCCAGCTTGGCTTGCAGCCCTTTGGGAGGTGGGGAACCTTCTCCGGGTGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp TGGGTGCGCCAGGGGAGGACTCGGAGTCTGATGAGCTaGCCCCAGGACCATCACCGGCAGAGGCATTACCCA +
Preference number: 6 (lower is better)
Translates to: WVRQGRTRSLMS*PQDHHRQRHYP
Trigger: TGGGTAATGCCTCTGCCGGTGATGGTCCTGGGGGCAGCTCATCAGACTCCGAGTCCTCCCCTGGCGCACCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp ATGACGGAGGCGTCGGGCCCTGCTGAGCCCGCGTGGTaGAGGCCAGTGTCAAAAAGTCCAGAGAGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: MTEASGPAEPAW*RPVSKSPERPA
Trigger: TGCAGGCCTCTCTGGACTTTTTGACACTGGCCTCCACCACGCGGGCTCAGCAGGGCCCGACGCCTCCGTCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp AAGGTTCCCCACCTCCCAAAGGGCTGCAAGCCAAGCTaGCCCGGTGGCCCATTGAGGGATAGCTGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: KVPHLPKGCKPS*PGGPLRDSCLR
Trigger: GCGGAGGCAGCTATCCCTCAATGGGCCACCGGGCCAGCTTGGCTTGCAGCCCTTTGGGAGGTGGGGAACCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp CATAAGCAGCTGCAGGTCCACCCAGGCTCTGACACTTaGGTGTGGCGGTGGATCGAGGTGGCGGTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: HKQLQVHPGSDT*VWRWIEVAVAW
Trigger: CCAGGCCACCGCCACCTCGATCCACCGCCACACCCAAGTGTCAGAGCCTGGGTGGACCTGCAGCTGCTTATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp CTCCGGTGTGGACGTGTCCTTAGGGCCTGTGAGGGGTaGGTCGTCCAGGGCCGAGATGGCGGAGGAAATGCT +
Preference number: 6 (lower is better)
Translates to: LRCGRVLRACEG*VVQGRDGGGNA
Trigger: AGCATTTCCTCCGCCATCTCGGCCCTGGACGACCCACCCCTCACAGGCCCTAAGGACACGTCCACACCGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp GGAGGTGGCGCTTGGACCTTAGACGGAGGTGCAGAGTaGCCCCCAACAGGGGTAGGGCCCTTGGTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: GGGAWTLDGGAE*PPTGVGPLVCP
Trigger: TGGGCAGACCAAGGGCCCTACCCCTGTTGGGGGCAACTCTGCACCTCCGTCTAAGGTCCAAGCGCCACCTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp ACGGGAAGGTGCTGGAACCTGGGAGGGCACCAGAGATaGAGAGTTCCGTGGGGCCCGGTGTGTGCATGGCTG +
Preference number: 6 (lower is better)
Translates to: TGRCWNLGGHQR*RVPWGPVCAWL
Trigger: CAGCCATGCACACACCGGGCCCCACGGAACTCTTCATCTCTGGTGCCCTCCCAGGTTCCAGCACCTTCCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp ACCAGCCCCAGAGGCTTTCCCAGCGGCATAAGCAGCTaGAGGTCCACCCAGGCTCTGACACTTGGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: TSPRGFPSGISS*RSTQALTLGCG
Trigger: GCCACACCCAAGTGTCAGAGCCTGGGTGGACCTGCAGCTGCTTATGCCGCTGGGAAAGCCTCTGGGGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp AGGCTTGGGAGGTGGCGCTTGGACCTTAGACGGAGGTaGAGAGTTGCCCCCAACAGGGGTAGGGCCCTTGGT +
Preference number: 6 (lower is better)
Translates to: RLGRWRLDLRRR*RVAPNRGRALG
Trigger: ACCAAGGGCCCTACCCCTGTTGGGGGCAACTCTGCACCTCCGTCTAAGGTCCAAGCGCCACCTCCCAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp CCCTCTTCGGGGGAGCCTTCTCCAGTCTGCTCCACCTaGAGCTGTGGGAACGTGTGCAGGGCATCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: PSSGEPSPVCST*SCGNVCRASCR
Trigger: TCTGCAGGATGCCCTGCACACGTTCCCACAGCTGCAGGTGGAGCAGACTGGAGAAGGCTCCCCCGAAGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp TTCATGACGGAGGCGTCGGGCCCTGCTGAGCCCGCGTaGTGGAGGCCAGTGTCAAAAAGTCCAGAGAGGCCT +
Preference number: 6 (lower is better)
Translates to: FMTEASGPAEPA*WRPVSKSPERP
Trigger: AGGCCTCTCTGGACTTTTTGACACTGGCCTCCACCACGCGGGCTCAGCAGGGCCCGACGCCTCCGTCATGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GGGGTACAAACCGCGGTGCCTTGGTCCCTTGAGGGCTaGGGCTTCTGTAGGCGCCTGCAGGATCTTTGCCCT +
Preference number: 6 (lower is better)
Translates to: GVQTAVPWSLEG*GFCRRLQDLCP
Trigger: AGGGCAAAGATCCTGCAGGCGCCTACAGAAGCCCCAGCCCTCAAGGGACCAAGGCACCGCGGTTTGTACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp CCGAGGTTTCTTGGCCCCATCAGTGGTTATGGAGGCTaGCCCCGCCATGGCAGGGCCCTCCAGTGGACGAAT +
Preference number: 6 (lower is better)
Translates to: PRFLGPISGYGG*PRHGRALQWTN
Trigger: ATTCGTCCACTGGAGGGCCCTGCCATGGCGGGGCCAGCCTCCATAACCACTGATGGGGCCAAGAAACCTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp CCGTCTCCCCACACACCGCTGCCGTCTCTTGCTTCTTaGCCAGGTGCAAAGGCCGAGCGTCTGGAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: PSPHTPLPSLAS*PGAKAERLEVQ
Trigger: CTGAACCTCCAGACGCTCGGCCTTTGCACCTGGCCAAGAAGCAAGAGACGGCAGCGGTGTGTGGGGAGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp TTTCTGCAGAAGGGCCTTCTGAACACGCCAGATGGGTaGGGGCTCCCGGCCAGTCTGCAGGGCCAGCTTGAG +
Preference number: 6 (lower is better)
Translates to: FLQKGLLNTPDG*GLPASLQGQLE
Trigger: CTCAAGCTGGCCCTGCAGACTGGCCGGGAGCCCCCACCCATCTGGCGTGTTCAGAAGGCCCTTCTGCAGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp CCAGCTGCTCCAGCTGTGGCTCCACTAGGCCCACCCTaGCTAGGTTCTCCAGCACCCGGAGAAGGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: PAAPAVAPLGPP*LGSPAPGEGSP
Trigger: TGGGGAACCTTCTCCGGGTGCTGGAGAACCTAGCAAGGGTGGGCCTAGTGGAGCCACAGCTGGAGCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp AAATCCTTGCCCGTAGGCTTGAGGGCCCAGAAGCCCTaGGGGCTGGCCAGGGGAATATGCCTGGCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: KSLPVGLRAQKP*GLARGICLAPS
Trigger: GCTGGGAGCCAGGCATATTCCCCTGGCCAGCCCCAAGGGCTTCTGGGCCCTCAAGCCTACGGGCAAGGATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp CCCCACCTCCCAAAGGGCTGCAAGCCAAGCTGGCCCGGTGGCCCATaGAGGGATAGCTGCCTCCGCAGCTCAGATAGTGCTGCAGGGAAT +
Preference number: 6 (lower is better)
Translates to: PHLPKGCKPSWPGGP*RDSCLRSSDSAAGN
Trigger: ATTCCCTGCAGCACTATCTGAGCTGCGGAGGCAGCTATCCCTCAATGGGCCACCGGGCCAGCTTGGCTTGCAGCCCTTTGGGAGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp GCTAGGGCCTTTGCTCAAGTCCTGTGCTTGACCCCCTCCAAATCCTaGCCCGTAGGCTTGAGGGCCCAGAAGCCCTTGGGGCTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: ARAFAQVLCLTPSKS*PVGLRAQKPLGLAR
Trigger: CCTGGCCAGCCCCAAGGGCTTCTGGGCCCTCAAGCCTACGGGCAAGGATTTGGAGGGGGTCAAGCACAGGACTTGAGCAAAGGCCCTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp GGGGGCGCCAGGAACGGAGCTGAGGCTAAGACCGAACTTAAGTATTaGCCAGGGGCTCCTGGAGAGCCAACGCCTGGAGGGCGGCCAGTA +
Preference number: 6 (lower is better)
Translates to: GGARNGAEAKTELKY*PGAPGEPTPGGRPV
Trigger: TACTGGCCGCCCTCCAGGCGTTGGCTCTCCAGGAGCCCCTGGCAAATACTTAAGTTCGGTCTTAGCCTCAGCTCCGTTCCTGGCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp TCAGGCTTGGGAGGTGGCGCTTGGACCTTAGACGGAGGTGCAGAGTaGCCCCCAACAGGGGTAGGGCCCTTGGTCTGCCCAGATCGTCTG +
Preference number: 6 (lower is better)
Translates to: SGLGGGAWTLDGGAE*PPTGVGPLVCPDRL
Trigger: CAGACGATCTGGGCAGACCAAGGGCCCTACCCCTGTTGGGGGCAACTCTGCACCTCCGTCTAAGGTCCAAGCGCCACCTCCCAAGCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp CAAAGGGCTGCAAGCCAAGCTGGCCCGGTGGCCCATTaGGGGATAGCTGCCTCCGCAGCTCAGATAGTGCTG +
Preference number: 6 (lower is better)
Translates to: QRAASQAGPVAH*GIAASAAQIVL
Trigger: CAGCACTATCTGAGCTGCGGAGGCAGCTATCCCTCAATGGGCCACCGGGCCAGCTTGGCTTGCAGCCCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp AGAGCCAACGCCTGGAGGGCGGCCAGTAGCAGGCGGTaGCTGGAGGGGTCGGATAATATGAGATGGGCTAGC +
Preference number: 6 (lower is better)
Translates to: RANAWRAASSRR*LEGSDNMRWAS
Trigger: GCTAGCCCATCTCATATTATCCGACCCCTCCAGTCACCGCCTGCTACTGGCCGCCCTCCAGGCGTTGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp GAGGTCCGAGGTGGGCTAGGTGCCTGGAGCAGGTGCTaGATGAGAAACTCTTCGTCTTCCGTGCGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: EVRGGLGAWSRC*MRNSSSSVRSA
Trigger: CGCCGAGCGCACGGAAGACGAAGAGTTTCTCATTCAGCACCTGCTCCAGGCACCTAGCCCACCTCGGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp AAGCCAAGCTGGCCCGGTGGCCCATTGAGGGATAGCTaGCTCCGCAGCTCAGATAGTGCTGCAGGGAATGGG +
Preference number: 6 (lower is better)
Translates to: KPSWPGGPLRDS*LRSSDSAAGNG
Trigger: CCCATTCCCTGCAGCACTATCTGAGCTGCGGAGGCAGCTATCCCTCAATGGGCCACCGGGCCAGCTTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp CCTGACGGCAATGGTTCCAGAGCCCCGAGCAGTTCTTaGATGGCTCCAGGAGGCTCCAGACTCTCCTCGGGT +
Preference number: 6 (lower is better)
Translates to: PDGNGSRAPSSS*MAPGGSRLSSG
Trigger: ACCCGAGGAGAGTCTGGAGCCTCCTGGAGCCATGCAAGAACTGCTCGGGGCTCTGGAACCATTGCCGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp CCACACACCGCTGCCGTCTCTTGCTTCTTGGCCAGGTaGAAAGGCCGAGCGTCTGGAGGTTCAGGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: PHTAAVSCFLAR*KGRASGGSGSS
Trigger: AGAGGACCCTGAACCTCCAGACGCTCGGCCTTTGCACCTGGCCAAGAAGCAAGAGACGGCAGCGGTGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GGCCGCATAGGCCTGGCGATGCAAGATGTCGGTTTCTaGGTGGGAAGTCCGGGAGCTGCCGTAGACCAAGCT +
Preference number: 6 (lower is better)
Translates to: GRIGLAMQDVGF*VGSPGAAVDQA
Trigger: AGCTTGGTCTACGGCAGCTCCCGGACTTCCCACCCAGAAACCGACATCTTGCATCGCCAGGCCTATGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp AGACAGGGCAGAGGAAGACGGGAAGGTGCTGGAACCTaGGAGGGCACCAGAGATGAAGAGTTCCGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: RQGRGRREGAGT*EGTRDEEFRGA
Trigger: GGCCCCACGGAACTCTTCATCTCTGGTGCCCTCCCAGGTTCCAGCACCTTCCCGTCTTCCTCTGCCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GCTCCTTGGCACCGGCTCCATAGTGAACGACTGAGGTaGCTAGTCCCTCGGGAGTTTCGCCACCCCGTTCTG +
Preference number: 6 (lower is better)
Translates to: APWHRLHSERLR*LVPREFRHPVL
Trigger: CAGAACGGGGTGGCGAAACTCCCGAGGGACTAGCCACCTCAGTCGTTCACTATGGAGCCGGTGCCAAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp CCAAAGGGCTGCAAGCCAAGCTGGCCCGGTGGCCCATaGAGGGATAGCTGCCTCCGCAGCTCAGATAGTGCT +
Preference number: 6 (lower is better)
Translates to: PKGCKPSWPGGP*RDSCLRSSDSA
Trigger: AGCACTATCTGAGCTGCGGAGGCAGCTATCCCTCAATGGGCCACCGGGCCAGCTTGGCTTGCAGCCCTTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp TCTTCATCCGAGGAGAAGGAGGGCAGCGTCTCGAGGTaGCGCTTCAGCTCTTCGTCCAGCCGCTTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: SSSEEKEGSVSR*RFSSSSSRLQG
Trigger: CCCCTGCAAGCGGCTGGACGAAGAGCTGAAGCGCAACCTCGAGACGCTGCCCTCCTTCTCCTCGGATGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp ACAGAGTCTTCTTCATCCGAGGAGAAGGAGGGCAGCGTCTCGAGGTaGCGCTTCAGCTCTTCGTCCAGCCGCTTGCAGGGGGAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: TESSSSEEKEGSVSR*RFSSSSSRLQGEGQ
Trigger: CTGCCCTTCCCCCTGCAAGCGGCTGGACGAAGAGCTGAAGCGCAACCTCGAGACGCTGCCCTCCTTCTCCTCGGATGAAGAAGACTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp GGCTCTGGAGGCTTCTCCGATGTCATCTTCTCAGGGGTCTCAGGCTaGGGAGGTGGCGCTTGGACCTTAGACGGAGGTGCAGAGTTGCCC +
Preference number: 6 (lower is better)
Translates to: GSGGFSDVIFSGVSG*GGGAWTLDGGAELP
Trigger: GGGCAACTCTGCACCTCCGTCTAAGGTCCAAGCGCCACCTCCCAAGCCTGAGACCCCTGAGAAGATGACATCGGAGAAGCCTCCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp CAAGACACCACCCCCTGCCAGGCGCTCGAAACCCAATaGCGAGGGCACTGTAGGTGCCTGGGAAGGCTTCAA +
Preference number: 6 (lower is better)
Translates to: QDTTPCQALETQ*RGHCRCLGRLQ
Trigger: TTGAAGCCTTCCCAGGCACCTACAGTGCCCTCGTCATTGGGTTTCGAGCGCCTGGCAGGGGGTGGTGTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp CCAGTAGCAGGCGGTGACTGGAGGGGTCGGATAATATaGGATGGGCTAGCCTCCCCACCACCTCCCAGAGAG +
Preference number: 6 (lower is better)
Translates to: PVAGGDWRGRII*DGLASPPPPRE
Trigger: CTCTCTGGGAGGTGGTGGGGAGGCTAGCCCATCTCATATTATCCGACCCCTCCAGTCACCGCCTGCTACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp ATCCAGACCCAGGCCTGGAGTCTCTGGTCCAGTTCCTaGTGCCCGGCCTCCACAGTAGGGTCCATAGGGATC +
Preference number: 6 (lower is better)
Translates to: IQTQAWSLWSSS*CPASTVGSIGI
Trigger: GATCCCTATGGACCCTACTGTGGAGGCCGGGCATCAGGAACTGGACCAGAGACTCCAGGCCTGGGTCTGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp ACGGCAATGGTTCCAGAGCCCCGAGCAGTTCTTGCATaGCTCCAGGAGGCTCCAGACTCTCCTCGGGTCGTA +
Preference number: 6 (lower is better)
Translates to: TAMVPEPRAVLA*LQEAPDSPRVV
Trigger: TACGACCCGAGGAGAGTCTGGAGCCTCCTGGAGCCATGCAAGAACTGCTCGGGGCTCTGGAACCATTGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp CCAGCATCTCCACATAGCTCCTGTACATCTCCCGCATaGCCCGTGTCTTCAGCAGCCGTCCTGGAACTGCCC +
Preference number: 6 (lower is better)
Translates to: PASPHSSCTSPA*PVSSAAVLELP
Trigger: GGGCAGTTCCAGGACGGCTGCTGAAGACACGGGCCATGCGGGAGATGTACAGGAGCTATGTGGAGATGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp CATCTTCTCAGGGGTCTCAGGCTTGGGAGGTGGCGCTaGGACCTTAGACGGAGGTGCAGAGTTGCCCCCAAC +
Preference number: 6 (lower is better)
Translates to: HLLRGLRLGRWR*DLRRRCRVAPN
Trigger: GTTGGGGGCAACTCTGCACCTCCGTCTAAGGTCCAAGCGCCACCTCCCAAGCCTGAGACCCCTGAGAAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp CGGAGGACCCCCAGAATAGCTAGGGCCTTTGCTCAAGTCCTGTGCTaGACCCCCTCCAAATCCTTGCCCGTAGGCTTGAGGGCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: RRTPRIARAFAQVLC*TPSKSLPVGLRAQK
Trigger: CTTCTGGGCCCTCAAGCCTACGGGCAAGGATTTGGAGGGGGTCAAGCACAGGACTTGAGCAAAGGCCCTAGCTATTCTGGGGGTCCTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp GGAACGGAGCTGAGGCTAAGACCGAACTTAAGTATTTaGCAGGGGCTCCTGGAGAGCCAACGCCTGGAGGGC +
Preference number: 6 (lower is better)
Translates to: GTELRLRPNLSI*QGLLESQRLEG
Trigger: GCCCTCCAGGCGTTGGCTCTCCAGGAGCCCCTGGCAAATACTTAAGTTCGGTCTTAGCCTCAGCTCCGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp ATCTTCTCAGGGGTCTCAGGCTTGGGAGGTGGCGCTTaGACCTTAGACGGAGGTGCAGAGTTGCCCCCAACA +
Preference number: 6 (lower is better)
Translates to: IFSGVSGLGGGA*TLDGGAELPPT
Trigger: TGTTGGGGGCAACTCTGCACCTCCGTCTAAGGTCCAAGCGCCACCTCCCAAGCCTGAGACCCCTGAGAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp CGATGTCATCTTCTCAGGGGTCTCAGGCTTGGGAGGTaGCGCTTGGACCTTAGACGGAGGTGCAGAGTTGCC +
Preference number: 6 (lower is better)
Translates to: RCHLLRGLRLGR*RLDLRRRCRVA
Trigger: GGCAACTCTGCACCTCCGTCTAAGGTCCAAGCGCCACCTCCCAAGCCTGAGACCCCTGAGAAGATGACATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp TTTGCTCAAGTCCTGTGCTTGACCCCCTCCAAATCCTaGCCCGTAGGCTTGAGGGCCCAGAAGCCCTTGGGG +
Preference number: 6 (lower is better)
Translates to: FAQVLCLTPSKS*PVGLRAQKPLG
Trigger: CCCCAAGGGCTTCTGGGCCCTCAAGCCTACGGGCAAGGATTTGGAGGGGGTCAAGCACAGGACTTGAGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp GGCTTCTCCGATGTCATCTTCTCAGGGGTCTCAGGCTaGGGAGGTGGCGCTTGGACCTTAGACGGAGGTGCA +
Preference number: 6 (lower is better)
Translates to: GFSDVIFSGVSG*GGGAWTLDGGA
Trigger: TGCACCTCCGTCTAAGGTCCAAGCGCCACCTCCCAAGCCTGAGACCCCTGAGAAGATGACATCGGAGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp AGGGCCGAGATGGCGGAGGAAATGCTCTCCTGCAGGTCTCTGTTCTaGGCCACAGAGTCTTCTTCATCCGAGGAGAAGGAGGGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: RAEMAEEMLSCRSLF*ATESSSSEEKEGSV
Trigger: GACGCTGCCCTCCTTCTCCTCGGATGAAGAAGACTCTGTGGCCAAGAACAGAGACCTGCAGGAGAGCATTTCCTCCGCCATCTCGGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp CTAGTCCGGATGACGCTCTGCAGGTGGTACCTCTGGGGATCTTCCTaGGCTAATTCATATGGTGTGCCTGGCGCTCCTCCAGCTCCACCA +
Preference number: 6 (lower is better)
Translates to: LVRMTLCRWYLWGSS*ANSYGVPGAPPAPP
Trigger: TGGTGGAGCTGGAGGAGCGCCAGGCACACCATATGAATTAGCCAAGGAAGATCCCCAGAGGTACCACCTGCAGAGCGTCATCCGGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp GTGGCCCGCTCTGGATCAGGCCCAGTGGCTCTGCATTaGCTGTGGAGGGAAGCTCAGGAGGTTTGTTGTGAT +
Preference number: 6 (lower is better)
Translates to: VARSGSGPVALH*LWREAQEVCCD
Trigger: ATCACAACAAACCTCCTGAGCTTCCCTCCACAGTCAATGCAGAGCCACTGGGCCTGATCCAGAGCGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp GCTTCTTTGGCTTGGTTGAACAGAAGATGGGCGAGGTaGGGCCACCCTTGGGCTCAGAGACAGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: ASLAWLNRRWAR*GHPWAQRQVVV
Trigger: CACCACCACCTGTCTCTGAGCCCAAGGGTGGCCTCACCTCGCCCATCTTCTGTTCAACCAAGCCAAAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp CAGGCCAGCTTGGTAGAGTGGTGGGTGCCGCTTGCCTaGCTTGAGAAAGTCAAGGAAGGACGCCATGAACCC +
Preference number: 6 (lower is better)
Translates to: QASLVEWWVPLA*LEKVKEGRHEP
Trigger: GGGTTCATGGCGTCCTTCCTTGACTTTCTCAAGTCAGGCAAGCGGCACCCACCACTCTACCAAGCTGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GGGTCCATAGGGATCATAAGCAGTGGGACCAGGGGGTaGACCAGCACCAGTCTTGGGGTCTCCATCATCTTC +
Preference number: 6 (lower is better)
Translates to: GSIGIISSGTRG*TSTSLGVSIIF
Trigger: GAAGATGATGGAGACCCCAAGACTGGTGCTGGTCCACCCCCTGGTCCCACTGCTTATGATCCCTATGGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp AGGAACGGAGCTGAGGCTAAGACCGAACTTAAGTATTaGCCAGGGGCTCCTGGAGAGCCAACGCCTGGAGGG +
Preference number: 6 (lower is better)
Translates to: RNGAEAKTELKY*PGAPGEPTPGG
Trigger: CCCTCCAGGCGTTGGCTCTCCAGGAGCCCCTGGCAAATACTTAAGTTCGGTCTTAGCCTCAGCTCCGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp AGGTTGGAGTCCAGGCTGTTGTGGTCTACACCCGAGATGACATCATaGGAAGGTGCTCCCAGACCCTCACCAGCTTTGGGCACAGACAGC +
Preference number: 6 (lower is better)
Translates to: RLESRLLWSTPEMTS*EGAPRPSPALGTDS
Trigger: GCTGTCTGTGCCCAAAGCTGGTGAGGGTCTGGGAGCACCTTCCAATGATGTCATCTCGGGTGTAGACCACAACAGCCTGGACTCCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp GGTTGGAGTCCAGGCTGTTGTGGTCTACACCCGAGATaGCATCATTGGAAGGTGCTCCCAGACCCTCACCAG +
Preference number: 6 (lower is better)
Translates to: GWSPGCCGLHPR*HHWKVLPDPHQ
Trigger: CTGGTGAGGGTCTGGGAGCACCTTCCAATGATGTCATCTCGGGTGTAGACCACAACAGCCTGGACTCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp GTAGTGGTGCAGAGAGTGGTAGAGGGTGTAGTACCCTaGCTTCTCCAGCTCCACCTTGAATTCCTGGGCCCG +
Preference number: 6 (lower is better)
Translates to: VVVQRVVEGVVP*LLQLHLEFLGP
Trigger: CGGGCCCAGGAATTCAAGGTGGAGCTGGAGAAGTCAGGGTACTACACCCTCTACCACTCTCTGCACCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp ACCCCCAGAATAGCTAGGGCCTTTGCTCAAGTCCTGTaGTTGACCCCCTCCAAATCCTTGCCCGTAGGCTTG +
Preference number: 6 (lower is better)
Translates to: TPRIARAFAQVL*LTPSKSLPVGL
Trigger: CAAGCCTACGGGCAAGGATTTGGAGGGGGTCAAGCACAGGACTTGAGCAAAGGCCCTAGCTATTCTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp CCCTCATCCAGACTGGCACTAGTCCGGATGACGCTCTaGAGGTGGTACCTCTGGGGATCTTCCTTGGCTAAT +
Preference number: 6 (lower is better)
Translates to: PSSRLALVRMTL*RWYLWGSSLAN
Trigger: ATTAGCCAAGGAAGATCCCCAGAGGTACCACCTGCAGAGCGTCATCCGGACTAGTGCCAGTCTGGATGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp TCGTCCAGGGCCGAGATGGCGGAGGAAATGCTCTCCTaGAGGTCTCTGTTCTTGGCCACAGAGTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: SSRAEMAEEMLS*RSLFLATESSS
Trigger: TGAAGAAGACTCTGTGGCCAAGAACAGAGACCTGCAGGAGAGCATTTCCTCCGCCATCTCGGCCCTGGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp CCCAGAATAGCTAGGGCCTTTGCTCAAGTCCTGTGCTaGACCCCCTCCAAATCCTTGCCCGTAGGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: PRIARAFAQVLC*TPSKSLPVGLR
Trigger: CCTCAAGCCTACGGGCAAGGATTTGGAGGGGGTCAAGCACAGGACTTGAGCAAAGGCCCTAGCTATTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp GGCAGGCGCCTTGGGTTTAGGCGGATATCTGCGGGCACATCGGCTTaGTCCTCATCAGCCTCGAACTCATATTCCTGTGCATACAGCTTC +
Preference number: 6 (lower is better)
Translates to: GRRLGFRRISAGTSA*SSSASNSYSCAYSF
Trigger: GAAGCTGTATGCACAGGAATATGAGTTCGAGGCTGATGAGGACAAAGCCGATGTGCCCGCAGATATCCGCCTAAACCCAAGGCGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp ATCTTGGCCTCGATCTTCTCCCGGGTCAGGTTGGAGTCCAGGCTGTaGTGGTCTACACCCGAGATGACATCATTGGAAGGTGCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: ILASIFSRVRLESRL*WSTPEMTSLEGAPR
Trigger: TCTGGGAGCACCTTCCAATGATGTCATCTCGGGTGTAGACCACAACAGCCTGGACTCCAACCTGACCCGGGAGAAGATCGAGGCCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 90 bp TCCTGCAGAGCTGGGCTCAGTGACAGCCGCTTCAGGACCTTTTTCTaGTGCTCATTGAGGAGGCCGTCAATCTTCCGCATGGGTGGAAGA +
Preference number: 6 (lower is better)
Translates to: SCRAGLSDSRFRTFF*CSLRRPSIFRMGGR
Trigger: TCTTCCACCCATGCGGAAGATTGACGGCCTCCTCAATGAGCACAAGAAAAAGGTCCTGAAGCGGCTGTCACTGAGCCCAGCTCTGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp GCATTGACTGTGGAGGGAAGCTCAGGAGGTTTGTTGTaGTCCAGACCCAGGCCTGGAGTCTCTGGTCCAGTT +
Preference number: 6 (lower is better)
Translates to: ALTVEGSSGGLL*SRPRPGVSGPV
Trigger: AACTGGACCAGAGACTCCAGGCCTGGGTCTGGATCACAACAAACCTCCTGAGCTTCCCTCCACAGTCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp CTGACTTCATCTCCGGCTGTTTCTCCTCTACCTCCTTaGTCTTGGCCTCGATCTTCTCCCGGGTCAGGTTGG +
Preference number: 6 (lower is better)
Translates to: LTSSPAVSPLPP*SWPRSSPGSGW
Trigger: CCAACCTGACCCGGGAGAAGATCGAGGCCAAGATCAAGGAGGTAGAGGAGAAACAGCCGGAGATGAAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp GTTGTGGTCTACACCCGAGATGACATCATTGGAAGGTaGTCCCAGACCCTCACCAGCTTTGGGCACAGACAG +
Preference number: 6 (lower is better)
Translates to: VVVYTRDDIIGR*SQTLTSFGHRQ
Trigger: CTGTCTGTGCCCAAAGCTGGTGAGGGTCTGGGAGCACCTTCCAATGATGTCATCTCGGGTGTAGACCACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS GCA 72 bp GGGCTCAGTGACAGCCGCTTCAGGACCTTTTTCTTGTaGTCATTGAGGAGGCCGTCAATCTTCCGCATGGGT +
Preference number: 6 (lower is better)
Translates to: GLSDSRFRTFFL*SLRRPSIFRMG
Trigger: ACCCATGCGGAAGATTGACGGCCTCCTCAATGAGCACAAGAAAAAGGTCCTGAAGCGGCTGTCACTGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GTGCTCATTGAGGAGGCCGTCAATCTTCCGCATGGGTaGAAGATAGAGTTCATCATGCGTGTCCTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: VLIEEAVNLPHG*KIEFIMRVLQG
Trigger: GCCCTGGAGGACACGCATGATGAACTCTATCTTCCACCCATGCGGAAGATTGACGGCCTCCTCAATGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp ATGACGCTCTGCAGGTGGTACCTCTGGGGATCTTCCTaGGCTAATTCATATGGTGTGCCTGGCGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: MTLCRWYLWGSS*ANSYGVPGAPP
Trigger: TGGAGGAGCGCCAGGCACACCATATGAATTAGCCAAGGAAGATCCCCAGAGGTACCACCTGCAGAGCGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp GCTGGGCTCAGTGACAGCCGCTTCAGGACCTTTTTCTaGTGCTCATTGAGGAGGCCGTCAATCTTCCGCATG +
Preference number: 6 (lower is better)
Translates to: AGLSDSRFRTFF*CSLRRPSIFRM
Trigger: CATGCGGAAGATTGACGGCCTCCTCAATGAGCACAAGAAAAAGGTCCTGAAGCGGCTGTCACTGAGCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp GCACTAGTCCGGATGACGCTCTGCAGGTGGTACCTCTaGGGATCTTCCTTGGCTAATTCATATGGTGTGCCT +
Preference number: 6 (lower is better)
Translates to: ALVRMTLCRWYL*GSSLANSYGVP
Trigger: AGGCACACCATATGAATTAGCCAAGGAAGATCCCCAGAGGTACCACCTGCAGAGCGTCATCCGGACTAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp ATCTTCTCCCGGGTCAGGTTGGAGTCCAGGCTGTTGTaGTCTACACCCGAGATGACATCATTGGAAGGTGCT +
Preference number: 6 (lower is better)
Translates to: IFSRVRLESRLL*STPEMTSLEGA
Trigger: AGCACCTTCCAATGATGTCATCTCGGGTGTAGACCACAACAGCCTGGACTCCAACCTGACCCGGGAGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp TCGATCTTCTCCCGGGTCAGGTTGGAGTCCAGGCTGTaGTGGTCTACACCCGAGATGACATCATTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: SIFSRVRLESRL*WSTPEMTSLEG
Trigger: ACCTTCCAATGATGTCATCTCGGGTGTAGACCACAACAGCCTGGACTCCAACCTGACCCGGGAGAAGATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp ATGGCGGAGGAAATGCTCTCCTGCAGGTCTCTGTTCTaGGCCACAGAGTCTTCTTCATCCGAGGAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: MAEEMLSCRSLF*ATESSSSEEKE
Trigger: CTCCTTCTCCTCGGATGAAGAAGACTCTGTGGCCAAGAACAGAGACCTGCAGGAGAGCATTTCCTCCGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS TCA 72 bp GTGACAGCCGCTTCAGGACCTTTTTCTTGTGCTCATTaGGGAGGCCGTCAATCTTCCGCATGGGTGGAAGAT +
Preference number: 6 (lower is better)
Translates to: VTAASGPFSCAH*GGRQSSAWVED
Trigger: ATCTTCCACCCATGCGGAAGATTGACGGCCTCCTCAATGAGCACAAGAAAAAGGTCCTGAAGCGGCTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CCA 72 bp TCCAGACTGGCACTAGTCCGGATGACGCTCTGCAGGTaGTACCTCTGGGGATCTTCCTTGGCTAATTCATAT +
Preference number: 6 (lower is better)
Translates to: SRLALVRMTLCR*YLWGSSLANSY
Trigger: ATATGAATTAGCCAAGGAAGATCCCCAGAGGTACCACCTGCAGAGCGTCATCCGGACTAGTGCCAGTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp CTTGGGTTTAGGCGGATATCTGCGGGCACATCGGCTTaGTCCTCATCAGCCTCGAACTCATATTCCTGTGCA +
Preference number: 6 (lower is better)
Translates to: LGFRRISAGTSA*SSSASNSYSCA
Trigger: TGCACAGGAATATGAGTTCGAGGCTGATGAGGACAAAGCCGATGTGCCCGCAGATATCCGCCTAAACCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp ACATCATTGGAAGGTGCTCCCAGACCCTCACCAGCTTaGGGCACAGACAGCTTGATCTTAAGTGGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: TSLEGAPRPSPA*GTDSLILSGFR
Trigger: CCTGAAGCCACTTAAGATCAAGCTGTCTGTGCCCAAAGCTGGTGAGGGTCTGGGAGCACCTTCCAATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp AGTGACAGCCGCTTCAGGACCTTTTTCTTGTGCTCATaGAGGAGGCCGTCAATCTTCCGCATGGGTGGAAGA +
Preference number: 6 (lower is better)
Translates to: SDSRFRTFFLCS*RRPSIFRMGGR
Trigger: TCTTCCACCCATGCGGAAGATTGACGGCCTCCTCAATGAGCACAAGAAAAAGGTCCTGAAGCGGCTGTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8
CDS CAA 72 bp CCAAGAACTTCACGTAGAGGCGCTGGTACCGGTTTTTaGCATCTCCAAAATAACCCAGATAATTACTGGTGG +
Preference number: 6 (lower is better)
Translates to: PRTSRRGAGTGF*HLQNNPDNYWW
Trigger: CCACCAGTAATTATCTGGGTTATTTTGGAGATGCAAAAAACCGGTACCAGCGCCTCTACGTGAAGTTCTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057293.8