Pregenerated sensors for PRR11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020493Ensembl transcript IDs: ENSMUST00000051395.9
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCATCAGAGGTGATGCTGGAGCTGGGAGTATGGCTCAGATCACTTaGAAGAAGCACTTGCCCAGCGTGCTCAAAGCCCCGAGGCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: SIRGDAGAGSMAQIT*KKHLPSVLKAPRLL Trigger: GAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCATACTCCCAGCTCCAGCATCACCTCTGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR GCA 90 bp | ATGCTGGAGCTGGGAGTATGGCTCAGATCACTTGCAAGAAGCACTTaGCCAGCGTGCTCAAAGCCCCGAGGCTCCTCTGCACTGGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: MLELGVWLRSLARST*PACSKPRGSSALEK Trigger: CTTTTCCAGTGCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCATACTCCCAGCTCCAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR CCA 90 bp | AAGGGAGGGTTCCTTTGGCTTATAGTTCTACCACACACTCCGTTGTaGAAGGGAAGGAATCAAGAGCTGCATGCACAGCTCAGGGTAGTC | + |
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Preference number: 1 (lower is better) Translates to: KGGFLWLIVLPHTPL*KGRNQELHAQLRVV Trigger: GACTACCCTGAGCTGTGCATGCAGCTCTTGATTCCTTCCCTTCCACAACGGAGTGTGTGGTAGAACTATAAGCCAAAGGAACCCTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR TCA 90 bp | ACTGCTGGAACATGGACAGCAGATATAATAGCAAGCACTAAAGGCTaGAGGTATATTTCAGGGAGTATGTACTTAGCATGTGTGAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: TAGTWTADIIASTKG*RYISGSMYLACVRP Trigger: GGGCCTCACACATGCTAAGTACATACTCCCTGAAATATACCTTCAGCCTTTAGTGCTTGCTATTATATCTGCTGTCCATGTTCCAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR TCA 90 bp | ATAGAACTTGAGTCACTAGGCTTGGTGGCAAGTGTCTTTATCCTTTaGGCCATATTGCCAGCTCCCATGGAATTAAATTTGAACAGTTAC | + |
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Preference number: 1 (lower is better) Translates to: IELESLGLVASVFIL*AILPAPMELNLNSY Trigger: GTAACTGTTCAAATTTAATTCCATGGGAGCTGGCAATATGGCTCAAAGGATAAAGACACTTGCCACCAAGCCTAGTGACTCAAGTTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR GCA 90 bp | CTATCATTCAATAGAAATAATGGGATTTCTGGAAATACACCTCTATaGTCTGTCTCTTTCCTACCATTGTGCAATAACAGCATCAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: LSFNRNNGISGNTPL*SVSFLPLCNNSIRG Trigger: ACCTCTGATGCTGTTATTGCACAATGGTAGGAAAGAGACAGAGCATAGAGGTGTATTTCCAGAAATCCCATTATTTCTATTGAATGATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR CAA 90 bp | GATGCTGGAGCTGGGAGTATGGCTCAGATCACTTGCAAGAAGCACTaGCCCAGCGTGCTCAAAGCCCCGAGGCTCCTCTGCACTGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: DAGAGSMAQITCKKH*PSVLKAPRLLCTGK Trigger: TTTTCCAGTGCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCATACTCCCAGCTCCAGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR GCA 90 bp | TCCACCTCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATGCCCCGAGGCTCCTCTaGACTGGAAAAGAAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: STSVFQVTGTTGKSHHAHAPRLL*TGKERQ Trigger: CTGTCTTTCTTTTCCAGTGCAGAGGAGCCTCGGGGC...ATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGAGGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR CAA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTCTTAACTGCTGAGCTATCTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GCEPPCGCWDLNSGP*EEQSVLLTAELSLQ Trigger: CTGGAGAGATAGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTAAGCCTGAAGTCCAGTaGGAGCTACAGCACTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SVFQVTGTTGKSHHAHPSKPEVQ*ELQHCQ Trigger: CTGGCAGTGCTGTAGCTCCCACTGGACTTCAGGCTT...ACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCAGCGTGCTCAAAGCCCCGAGGCTCCTCTGCACTGGAAAAGAAAGACAGCATGAAGAATTTATTTaGCTGCTGGAACATGGACAG | + |
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Preference number: 2 (lower is better) Translates to: LPSVLKAPRLLCTGKERQHEEFI*LLEHGQ Trigger: CTGTCCATGTTCCAGCAGTCAAATAAATTCTTCATG...CTGTCTTTCTTTTCCAGTGCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR CCA 90 bp | TCCACCTCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATCCACACACTCCGTTGTaGAAGGGAAGGAATCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: STSVFQVTGTTGKSHHAHPHTPL*KGRNQE Trigger: CTCTTGATTCCTTCCCTTCCACAACGGAGTGTGTGG...ATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGAGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTATGGCTCAGATCACTTaGAAGAAGCACTTGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SVFQVTGTTGKSHHAHPSMAQIT*KKHLPS Trigger: GCTGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCAT...ACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR CCA 90 bp | TCCACCTCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATGAGGCTCCTCTGCACTaGAAAAGAAAGACAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: STSVFQVTGTTGKSHHAHEAPLH*KRKTAT Trigger: AGTAGCTGTCTTTCTTTTCCAGTGCAGAGGAGCCTC...ATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGAGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTCAGGGTAGTCTATCCCTGAGGGTAGGTTATCCCATCTCAATTAACCCAAGTGTCTTTATCCTTTaGGCCATATTGCCAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: TAQGSLSLRVGYPISINPSVFIL*AILPAP Trigger: GGGAGCTGGCAATATGGCTCAAAGGATAAAGACACT...TGGGTTAATTGAGATGGGATAACCTACCCTCAGGGATAGACTACCCTGAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR CCA 90 bp | GTGATGCTGGAGCTGGGAGTATGGCTCAGATCACTTGCAAGAAGCACTTGCCCATTAACCCAATCAAGATaGAAAGCCATCTTCCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: VMLELGVWLRSLARSTCPLTQSR*KAIFQV Trigger: TACCTGGAAGATGGCTTTCCATCTTGATTGGGTTAA...TGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCATACTCCCAGCTCCAGCATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR GCA 90 bp | TCCACCTCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATTCTTTCCTACCATTGTaGAATAACAGCATCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: STSVFQVTGTTGKSHHAHSFLPL*NNSIRG Trigger: ACCTCTGATGCTGTTATTGCACAATGGTAGGAAAGA...ATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGAGGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTATTAATTTTGTGTGTTaGAGGGGCACACATCATAGT | + |
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Preference number: 2 (lower is better) Translates to: SVFQVTGTTGKSHHAHPSINFVC*RGTHHS Trigger: ACTATGATGTGTGCCCCTTCAACACACAAAATTAAT...ACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR TCA 90 bp | TACATAGTGTTCAGTGCCATGAAGACATGTAGTAAACCATGGGATTCCAGAAATGCAAGCACTAAAGGCTaGAGGTATATTTCAGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: YIVFSAMKTCSKPWDSRNASTKG*RYISGS Trigger: ACTCCCTGAAATATACCTTCAGCCTTTAGTGCTTGC...ATTTCTGGAATCCCATGGTTTACTACATGTCTTCATGGCACTGAACACTATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR CAA 90 bp | ATTACTCATAGTTACACATATTTTAGTACATTAACATTTGGGCGGTaGGTCTTTCATTGTATGTTTCACTCCCGGGAGTCAGGCCGAGTT | + |
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Preference number: 2 (lower is better) Translates to: ITHSYTYFSTLTFGR*VFHCMFHSRESGRV Trigger: AACTCGGCCTGACTCCCGGGAGTGAAACATACAATGAAAGACCAACCGCCCAAATGTTAATGTACTAAAATATGTGTAACTATGAGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR TCA 90 bp | CCACCATTTGGCATCTCAAAGCACTATCATTCAATAGAAATAATGGGATTTCTGACCACAGAGGATCCTTaGCAAAGCATTCTGGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: PPFGISKHYHSIEIMGFLTTEDP*QSILEN Trigger: ATTTTCCAGAATGCTTTGTCAAGGATCCTCTGTGGT...CAGAAATCCCATTATTTCTATTGAATGATAGTGCTTTGAGATGCCAAATGGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR CCA 90 bp | TACATAGTGTTCAGTGCCATGAAGACATGTAGTAAACCATGGGATTCCAGAAATCTTGACAAAGCATTCTaGAAAATAGAGAGTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: YIVFSAMKTCSKPWDSRNLDKAF*KIESSC Trigger: GCATGAACTCTCTATTTTCCAGAATGCTTTGTCAAG...ATTTCTGGAATCCCATGGTTTACTACATGTCTTCATGGCACTGAACACTATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR CCA 90 bp | TACATAGTGTTCAGTGCCATGAAGACATGTAGTAAACCATGGGATTCCAGAAATAATTTATTTGACTGCTaGAACATGGACAGCAGATAT | + |
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Preference number: 2 (lower is better) Translates to: YIVFSAMKTCSKPWDSRNNLFDC*NMDSRY Trigger: ATATCTGCTGTCCATGTTCCAGCAGTCAAATAAATT...ATTTCTGGAATCCCATGGTTTACTACATGTCTTCATGGCACTGAACACTATGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR GCA 72 bp | CTGGGAGTATGGCTCAGATCACTTGCAAGAAGCACTTaGCCAGCGTGCTCAAAGCCCCGAGGCTCCTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: LGVWLRSLARST*PACSKPRGSSA Trigger: TGCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCATACTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR GCA 72 bp | GGTGATGCTGGAGCTGGGAGTATGGCTCAGATCACTTaGAAGAAGCACTTGCCCAGCGTGCTCAAAGCCCCG | + |
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Preference number: 3 (lower is better) Translates to: GDAGAGSMAQIT*KKHLPSVLKAP Trigger: CGGGGCTTTGAGCACGCTGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCATACTCCCAGCTCCAGCATCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR GCA 72 bp | TGGCTCAGATCACTTGCAAGAAGCACTTGCCCAGCGTaGTCAAAGCCCCGAGGCTCCTCTGCACTGGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: WLRSLARSTCPA*SKPRGSSALEK Trigger: CTTTTCCAGTGCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR TCA 72 bp | CCCTGGGTTCAGCCCCAAAGAGAGGAAGCAGAGGGATaGGAAGAAGGAAGAGGAGGAAGAAGAGAAGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: PWVQPQREEAEG*EEGRGGRREGG Trigger: TCCTCCTTCTCTTCTTCCTCCTCTTCCTTCTTCTCATCCCTCTGCTTCCTCTCTTTGGGGCTGAACCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR GCA 72 bp | CACTCCGTTGTGGAAGGGAAGGAATCAAGAGCTGCATaGACAGCTCAGGGTAGTCTATCCCTGAGGGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: HSVVEGKESRAA*TAQGSLSLRVG Trigger: ACCTACCCTCAGGGATAGACTACCCTGAGCTGTGCATGCAGCTCTTGATTCCTTCCCTTCCACAACGGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTCAGGGTAGTCTATCCCTGAGGGTAGGTTATCCCATCTCAATTAACCCAGCGGTTGGTCTTTCATaGTATGTTTCACTCCCGGGA | + |
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Preference number: 3 (lower is better) Translates to: TAQGSLSLRVGYPISINPAVGLS*YVSLPG Trigger: TCCCGGGAGTGAAACATACAATGAAAGACCAACCGC...TGGGTTAATTGAGATGGGATAACCTACCCTCAGGGATAGACTACCCTGAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR CCA 72 bp | TTCCTTTGGCTTATAGTTCTACCACACACTCCGTTGTaGAAGGGAAGGAATCAAGAGCTGCATGCACAGCTC | + |
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Preference number: 3 (lower is better) Translates to: FLWLIVLPHTPL*KGRNQELHAQL Trigger: GAGCTGTGCATGCAGCTCTTGATTCCTTCCCTTCCACAACGGAGTGTGTGGTAGAACTATAAGCCAAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR GCA 72 bp | AATACACCTCTATGCTCTGTCTCTTTCCTACCATTGTaGAATAACAGCATCAGAGGTGATGCTGGAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: NTPLCSVSFLPL*NNSIRGDAGAG Trigger: CCCAGCTCCAGCATCACCTCTGATGCTGTTATTGCACAATGGTAGGAAAGAGACAGAGCATAGAGGTGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR TCA 72 bp | TTTTCTTCCCTCCATTTGGGTCCTGGGTATAGAACTTaGGTCACTAGGCTTGGTGGCAAGTGTCTTTATCCT | + |
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Preference number: 3 (lower is better) Translates to: FSSLHLGPGYRT*VTRLGGKCLYP Trigger: AGGATAAAGACACTTGCCACCAAGCCTAGTGACTCAAGTTCTATACCCAGGACCCAAATGGAGGGAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR CAA 90 bp | TCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTCCCATGGAATTAAATTaGAACAGTTACTGTAGCCTA | + |
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Preference number: 3 (lower is better) Translates to: SVFQVTGTTGKSHHAHPSPMELN*NSYCSL Trigger: TAGGCTACAGTAACTGTTCAAATTTAATTCCATGGG...ACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR TCA 72 bp | TTCCTGATAAAACTGCCACAGACCACAGAGGATCCTTaGCAAAGCATTCTGGAAAATAGAGAGTTCATGCTG | + |
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Preference number: 3 (lower is better) Translates to: FLIKLPQTTEDP*QSILENREFML Trigger: CAGCATGAACTCTCTATTTTCCAGAATGCTTTGTCAAGGATCCTCTGTGGTCTGTGGCAGTTTTATCAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR-3UTR CAA 90 bp | CCACCATTTGGCATCTCAAAGCACTATCATTCAATAGAAATAATGGGATTTCTGAAGTGTCTTTATCCTTaGAGCCATATTGCCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: PPFGISKHYHSIEIMGFLKCLYP*SHIASS Trigger: GGAGCTGGCAATATGGCTCAAAGGATAAAGACACTT...CAGAAATCCCATTATTTCTATTGAATGATAGTGCTTTGAGATGCCAAATGGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR TCA 72 bp | CTGCACTGGAAAAGAAAGACAGCTACTTCTGCATCTTaGGCGATACTCACTTTAATCGAAATGATCCATCTA | + |
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Preference number: 3 (lower is better) Translates to: LHWKRKTATSAS*AILTLIEMIHL Trigger: TAGATGGATCATTTCGATTAAAGTGAGTATCGCTCAAGATGCAGAAGTAGCTGTCTTTCTTTTCCAGTGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR TCA 72 bp | ACATGGACAGCAGATATAATAGCAAGCACTAAAGGCTaGAGGTATATTTCAGGGAGTATGTACTTAGCATGT | + |
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Preference number: 3 (lower is better) Translates to: TWTADIIASTKG*RYISGSMYLAC Trigger: ACATGCTAAGTACATACTCCCTGAAATATACCTTCAGCCTTTAGTGCTTGCTATTATATCTGCTGTCCATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR TCA 72 bp | AGCATTCTGGAAAATAGAGAGTTCATGCTGAAACCATaGAGAATTTATTTGACTGCTGGAACATGGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: SILENREFMLKP*RIYLTAGTWTA Trigger: TGCTGTCCATGTTCCAGCAGTCAAATAAATTCTTCATGGTTTCAGCATGAACTCTCTATTTTCCAGAATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR GCA 72 bp | AATAGAAATAATGGGATTTCTGGAAATACACCTCTATaGTCTGTCTCTTTCCTACCATTGTGCAATAACAGC | + |
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Preference number: 3 (lower is better) Translates to: NRNNGISGNTPL*SVSFLPLCNNS Trigger: GCTGTTATTGCACAATGGTAGGAAAGAGACAGAGCATAGAGGTGTATTTCCAGAAATCCCATTATTTCTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR CAA 72 bp | GCTGGGAGTATGGCTCAGATCACTTGCAAGAAGCACTaGCCCAGCGTGCTCAAAGCCCCGAGGCTCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: AGSMAQITCKKH*PSVLKAPRLLC Trigger: GCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCATACTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR TCA 90 bp | TTGCCCAGCGTGCTCAAAGCCCCGAGGCTCCTCTGCACTGGAAAAGAAAGACAGGCGTTCCTCTGGTGGTaGTGGTACAAGCTTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LPSVLKAPRLLCTGKERQAFLWW*WYKLLS Trigger: AGAAAGAAGCTTGTACCATCACCACCAGAGGAACGC...CTGTCTTTCTTTTCCAGTGCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR TCA 90 bp | TTGCCCAGCGTGCTCAAAGCCCCGAGGCTCCTCTGCACTGGAAAAGAAAGACAGTGGTACCAGATTTTCTaGGCAGCAAAGGTGCTAAAG | + |
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Preference number: 4 (lower is better) Translates to: LPSVLKAPRLLCTGKERQWYQIF*AAKVLK Trigger: CTTTAGCACCTTTGCTGCTCAGAAAATCTGGTACCA...CTGTCTTTCTTTTCCAGTGCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | GTGATGCTGGAGCTGGGAGTATGGCTCAGATCACTTGCAAGAAGCACTTGCCCAGGGCTCCTTTCTACCTaGACTTTTCTCAGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VMLELGVWLRSLARSTCPGLLST*TFLSSF Trigger: GAAGCTGCTGAGAAAAGTCCAGGTAGAAAGGAGCCC...TGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCATACTCCCAGCTCCAGCATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR TCA 90 bp | TTGCCCAGCGTGCTCAAAGCCCCGAGGCTCCTCTGCACTGGAAAAGAAAGACAGTTTAATTCGAGTTGCTaGCACCCTGGAGTTAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LPSVLKAPRLLCTGKERQFNSSC*HPGVRF Trigger: AAACCTAACTCCAGGGTGTCAGCAACTCGAATTAAA...CTGTCTTTCTTTTCCAGTGCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | TCCACCTCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATCTGGCTGTGGCTGTGTaGAAGAAAGCACTGTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: STSVFQVTGTTGKSHHAHLAVAV*KKALFG Trigger: CCCAAACAGTGCTTTCTTCCACACAGCCACAGCCAG...ATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGAGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | TCCACCTCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATGTGGCAGAGATTGAGTaGGGCTTTGAGGATGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: STSVFQVTGTTGKSHHAHVAEIE*GFEDEP Trigger: TGGCTCATCCTCAAAGCCCCACTCAATCTCTGCCAC...ATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGAGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR CAA 72 bp | CCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTCTTAACTGCTGAGCTA | + |
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Preference number: 4 (lower is better) Translates to: PPCGCWDLNSGP*EEQSVLLTAEL Trigger: TAGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR GCA 90 bp | GTGATGCTGGAGCTGGGAGTATGGCTCAGATCACTTGCAAGAAGCACTTGCCCATGGTTCAACCTGAAGTaGTTTAGTGGTACCAGATTT | + |
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Preference number: 4 (lower is better) Translates to: VMLELGVWLRSLARSTCPWFNLK*FSGTRF Trigger: AAATCTGGTACCACTAAAGCACTTCAGGTTGAACCA...TGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCATACTCCCAGCTCCAGCATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | ACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTTTGTTTGTTTGTTTTAGGAGGATGATTGGCTaGCTGTGGCTGTGTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TGTTGKSHHAHPSLFVCFRRMIG*LWLCGR Trigger: TCTTCCACACAGCCACAGCCAGCCAATCATCCTCCT...AAAACAAACAAACAAACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR TCA 90 bp | ACAGCTCAGGGTAGTCTATCCCTGAGGGTAGGTTATCCCATCTCAATTAACCCAACAGGAGGAGTTTTCTaGGATGCTCTTCAGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: TAQGSLSLRVGYPISINPTGGVF*DALQVF Trigger: GAAAACCTGAAGAGCATCTCAGAAAACTCCTCCTGT...TGGGTTAATTGAGATGGGATAACCTACCCTCAGGGATAGACTACCCTGAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | TCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTAGCCAGTTTCTGCTTTaGGGAATATCTGCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVFQVTGTTGKSHHAHPSSQFLL*GISAAE Trigger: TTCTGCAGCAGATATTCCCCAAAGCAGAAACTGGCT...ACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | TACATAGTGTTCAGTGCCATGAAGACATGTAGTAAACCATGGGATTCCAGAAATTTCCCCATTCGTCGTTaGAGCACAGGCAGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIVFSAMKTCSKPWDSRNFPIRR*STGRHS Trigger: ACTGTGCCTGCCTGTGCTCCAACGACGAATGGGGAA...ATTTCTGGAATCCCATGGTTTACTACATGTCTTCATGGCACTGAACACTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | AGAAGGAAGAGGAGGAAGAAGAGAAGGAGGAAGAAAAAGAAGACTCAGACTATGATGATTGGCTGGCTGTaGCTGTGTGGAAGAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRKRRKKRRRKKKKTQTMMIGWL*LCGRKH Trigger: GTGCTTTCTTCCACACAGCCACAGCCAGCCAATCAT...CATAGTCTGAGTCTTCTTTTTCTTCCTCCTTCTCTTCTTCCTCCTCTTCCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | TACATAGTGTTCAGTGCCATGAAGACATGTAGTAAACCATGGGATTCCAGAAATGAGAAGGAGGATGATTaGCTGGCTGTGGCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YIVFSAMKTCSKPWDSRNEKEDD*LAVAVW Trigger: CCACACAGCCACAGCCAGCCAATCATCCTCCTTCTC...ATTTCTGGAATCCCATGGTTTACTACATGTCTTCATGGCACTGAACACTATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | ACAGCTCAGGGTAGTCTATCCCTGAGGGTAGGTTATCCCATCTCAATTAACCCATTCCGGAGATCGATTTaGCTTTTCCCAGGAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: TAQGSLSLRVGYPISINPFRRSI*LFPGVI Trigger: AATTACTCCTGGGAAAAGCCAAATCGATCTCCGGAA...TGGGTTAATTGAGATGGGATAACCTACCCTCAGGGATAGACTACCCTGAGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| 3UTR CAA 72 bp | GGAAATACACCTCTATGCTCTGTCTCTTTCCTACCATaGTGCAATAACAGCATCAGAGGTGATGCTGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GNTPLCSVSFLP*CNNSIRGDAGA Trigger: AGCTCCAGCATCACCTCTGATGCTGTTATTGCACAATGGTAGGAAAGAGACAGAGCATAGAGGTGTATTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR GCA 90 bp | TCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTGGTTTTCTCGGAGCTTaGACAATTCCCTTTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVFQVTGTTGKSHHAHPSGFLGA*TIPFSK Trigger: TTTTGAAAAGGGAATTGTGCAAGCTCCGAGAAAACC...ACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR GCA 90 bp | ACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTTTGTTTGTTTGTTTTTTGGGGAATATCTGCTaGAGAAGTAACCACTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGTTGKSHHAHPSLFVCFLGNIC*RSNHSF Trigger: GAAAGAGTGGTTACTTCTGCAGCAGATATTCCCCAA...AAAACAAACAAACAAACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR GCA 90 bp | ACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTTTGTTTGTTTGTTTTAGGAGTTTTCTGAGATaGTCTTCAGGTTTTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TGTTGKSHHAHPSLFVCFRSFLR*SSGFLG Trigger: TCCGAGAAAACCTGAAGAGCATCTCAGAAAACTCCT...AAAACAAACAAACAAACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | AGAAGGAAGAGGAGGAAGAAGAGAAGGAGGAAGAAAAAGAAGACTCAGACTATGGAAGAAAGCACTGTTTaGGATTCCCCATTCGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRKRRKKRRRKKKKTQTMEESTV*DSPFVV Trigger: AACGACGAATGGGGAATCCCAAACAGTGCTTTCTTC...CATAGTCTGAGTCTTCTTTTTCTTCCTCCTTCTCTTCTTCCTCCTCTTCCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | TACATAGTGTTCAGTGCCATGAAGACATGTAGTAAACCATGGGATTCCAGAAATGCTGCTTGTAGAAAGTaGCAGAGATTGAGTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YIVFSAMKTCSKPWDSRNAACRK*QRLSGA Trigger: AGCCCCACTCAATCTCTGCCACTTTCTACAAGCAGC...ATTTCTGGAATCCCATGGTTTACTACATGTCTTCATGGCACTGAACACTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR GCA 90 bp | TACATAGTGTTCAGTGCCATGAAGACATGTAGTAAACCATGGGATTCCAGAAATGCTTTGGGGAATATCTaGTGCAGAAGTAACCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: YIVFSAMKTCSKPWDSRNALGNI*CRSNHS Trigger: AGAGTGGTTACTTCTGCAGCAGATATTCCCCAAAGC...ATTTCTGGAATCCCATGGTTTACTACATGTCTTCATGGCACTGAACACTATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR GCA 90 bp | TACATAGTGTTCAGTGCCATGAAGACATGTAGTAAACCATGGGATTCCAGAAATGACAGCAACTGTAGATaGACCATGCTCTATTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YIVFSAMKTCSKPWDSRNDSNCR*TMLYLS Trigger: GGACAAATAGAGCATGGTGCATCTACAGTTGCTGTC...ATTTCTGGAATCCCATGGTTTACTACATGTCTTCATGGCACTGAACACTATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR GCA 90 bp | ACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTTTGTTTGTTTGTTTTTTCAGAGTAACATGTTaGAGATCAGAGACAGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: TGTTGKSHHAHPSLFVCFFRVTC*RSETVT Trigger: AGTTACTGTCTCTGATCTGCAACATGTTACTCTGAA...AAAACAAACAAACAAACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR GCA 90 bp | CCACCATTTGGCATCTCAAAGCACTATCATTCAATAGAAATAATGGGATTTCTGACTGTAGATGCACCATaGTCTATTTGTCCAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPFGISKHYHSIEIMGFLTVDAP*SICPKV Trigger: AACCTTTGGACAAATAGAGCATGGTGCATCTACAGT...CAGAAATCCCATTATTTCTATTGAATGATAGTGCTTTGAGATGCCAAATGGTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CCA 90 bp | TACATAGTGTTCAGTGCCATGAAGACATGTAGTAAACCATGGGATTCCAGAAATACATTCGTTTGGCTTTaGCTTTTAGCTTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YIVFSAMKTCSKPWDSRNTFVWL*LLAFFF Trigger: GAAGAAGAAAGCTAAAAGCCAAAGCCAAACGAATGT...ATTTCTGGAATCCCATGGTTTACTACATGTCTTCATGGCACTGAACACTATGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CAA 90 bp | TCCACCTCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATATTCCCCATTCGTCGTaGGAGCACAGGCAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: STSVFQVTGTTGKSHHAHIPHSS*EHRQAQ Trigger: CTGTGCCTGCCTGTGCTCCAACGACGAATGGGGAAT...ATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGAGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CAA 90 bp | TTGCCCAGCGTGCTCAAAGCCCCGAGGCTCCTCTGCACTGGAAAAGAAAGACAGTCCATGTTTTCTTTATaGTTCAGAGGGGTCCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LPSVLKAPRLLCTGKERQSMFSL*FRGVPP Trigger: GGGTGGGACCCCTCTGAACAATAAAGAAAACATGGA...CTGTCTTTCTTTTCCAGTGCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CAA 90 bp | TTGCCCAGCGTGCTCAAAGCCCCGAGGCTCCTCTGCACTGGAAAAGAAAGACAGAGGTTTTCTCGGAGCTaGCACAATTCCCTTTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPSVLKAPRLLCTGKERQRFSRS*HNSLFK Trigger: TTTGAAAAGGGAATTGTGCAAGCTCCGAGAAAACCT...CTGTCTTTCTTTTCCAGTGCAGAGGAGCCTCGGGGCTTTGAGCACGCTGGGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CAA 90 bp | TCCACCTCAGTTTTCCAAGTAACTGGGACAACTGGCAAAAGCCACCATGCCCATAGATTGAGTGGGGCTTaGAGGATGAGCCAGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: STSVFQVTGTTGKSHHAHRLSGA*RMSQLK Trigger: TTTCAGCTGGCTCATCCTCAAAGCCCCACTCAATCT...ATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGTTACTTGGAAAACTGAGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS TCA 90 bp | GCACAGGCAGGCACAGTTGTAAGTTTATCACTCGGGCAACACTTGTaGCAACAGCTTGAACAGGAGGAGTTTTCTGAGATGCTCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQAGTVVSLSLGQHL*QQLEQEEFSEMLFR Trigger: CCTGAAGAGCATCTCAGAAAACTCCTCCTGTTCAAGCTGTTGTCACAAGTGTTGCCCGAGTGATAAACTTACAACTGTGCCTGCCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS CCA 90 bp | TTAGGAAATCTCAGGTTCCAAGATGGTCTTAGCCAGTTTCTGCTTTaGGGAATATCTGCTGCAGAAGTAACCACTCTTTCCGGTTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LGNLRFQDGLSQFLL*GISAAEVTTLSGSG Trigger: CCCCGAACCGGAAAGAGTGGTTACTTCTGCAGCAGATATTCCCCAAAGCAGAAACTGGCTAAGACCATCTTGGAACCTGAGATTTCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CAA 90 bp | GTGATGCTGGAGCTGGGAGTATGGCTCAGATCACTTGCAAGAAGCACTTGCCCAGACATTCGTTTGGCTTaGGCTTTTAGCTTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VMLELGVWLRSLARSTCPDIRLA*AFSFLL Trigger: AAGAAGAAAGCTAAAAGCCAAAGCCAAACGAATGTC...TGGGCAAGTGCTTCTTGCAAGTGATCTGAGCCATACTCCCAGCTCCAGCATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CAA 90 bp | ACTGGGACAACTGGCAAAAGCCACCATGCCCATCCTAGTTTGTTTGTTTGTTTTTTCTTAGACATTCGTTaGGCTTTGGCTTTTAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TGTTGKSHHAHPSLFVCFFLDIR*ALAFSF Trigger: AAAGCTAAAAGCCAAAGCCAAACGAATGTCTAAGAA...AAAACAAACAAACAAACTAGGATGGGCATGGTGGCTTTTGCCAGTTGTCCCAGT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CAA 90 bp | CCACCATTTGGCATCTCAAAGCACTATCATTCAATAGAAATAATGGGATTTCTGTGCACCATGCTCTATTaGTCCAAAGGTTTATTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPFGISKHYHSIEIMGFLCTMLY*SKGLLH Trigger: ATGCAATAAACCTTTGGACAAATAGAGCATGGTGCA...CAGAAATCCCATTATTTCTATTGAATGATAGTGCTTTGAGATGCCAAATGGTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS-3UTR CAA 90 bp | CCACCATTTGGCATCTCAAAGCACTATCATTCAATAGAAATAATGGGATTTCTGAGGTTTATTGCATCTTaGATGTTAGGAAATCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPFGISKHYHSIEIMGFLRFIAS*MLGNLR Trigger: CCTGAGATTTCCTAACATCAAAGATGCAATAAACCT...CAGAAATCCCATTATTTCTATTGAATGATAGTGCTTTGAGATGCCAAATGGTGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS CCA 72 bp | TTGGCTGGCTGTGGCTGTGTGGAAGAAAGCACTGTTTaGGATTCCCCATTCGTCGTTGGAGCACAGGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LAGCGCVEESTV*DSPFVVGAQAG Trigger: GCCTGCCTGTGCTCCAACGACGAATGGGGAATCCCAAACAGTGCTTTCTTCCACACAGCCACAGCCAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS CCA 72 bp | TTGTTCAGAGGGGTCCCACCCGGGCTCCTTTCTACCTaGACTTTTCTCAGCAGCTTCCGGAGATCGATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LFRGVPPGLLST*TFLSSFRRSIW Trigger: CCAAATCGATCTCCGGAAGCTGCTGAGAAAAGTCCAGGTAGAAAGGAGCCCGGGTGGGACCCCTCTGAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS CAA 90 bp | GTCATGACAGGAGTGAGTCCAGTTCCTGTATCCATGTTTTCTTTATaGTTCAGAGGGGTCCCACCCGGGCTCCTTTCTACCTGGACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VMTGVSPVPVSMFSL*FRGVPPGLLSTWTF Trigger: AAAAGTCCAGGTAGAAAGGAGCCCGGGTGGGACCCCTCTGAACAATAAAGAAAACATGGATACAGGAACTGGACTCACTCCTGTCATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS GCA 72 bp | TGTGACAACAGCTTGAACAGGAGGAGTTTTCTGAGATaGTCTTCAGGTTTTCTCGGAGCTTGCACAATTCCC | + |
|
Preference number: 6 (lower is better) Translates to: CDNSLNRRSFLR*SSGFLGACTIP Trigger: GGGAATTGTGCAAGCTCCGAGAAAACCTGAAGAGCATCTCAGAAAACTCCTCCTGTTCAAGCTGTTGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS CCA 72 bp | CTCAGGTTCCAAGATGGTCTTAGCCAGTTTCTGCTTTaGGGAATATCTGCTGCAGAAGTAACCACTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRFQDGLSQFLL*GISAAEVTTLS Trigger: GGAAAGAGTGGTTACTTCTGCAGCAGATATTCCCCAAAGCAGAAACTGGCTAAGACCATCTTGGAACCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS CAA 90 bp | AACTTAGGAGAGACCACAGCGGCTTCTTTCTTCTTAGACATTCGTTaGGCTTTGGCTTTTAGCTTTCTTCTTCGCTGTTTGTACTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NLGETTAASFFLDIR*ALAFSFLLRCLYLG Trigger: GCCCAAGTACAAACAGCGAAGAAGAAAGCTAAAAGCCAAAGCCAAACGAATGTCTAAGAAGAAAGAAGCCGCTGTGGTCTCTCCTAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS GCA 72 bp | AACTCTGGGCTACACAGGTCTGACAGCAACTGTAGATaGACCATGCTCTATTTGTCCAAAGGTTTATTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: NSGLHRSDSNCR*TMLYLSKGLLH Trigger: ATGCAATAAACCTTTGGACAAATAGAGCATGGTGCATCTACAGTTGCTGTCAGACCTGTGTAGCCCAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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| CDS GCA 72 bp | GGCTACACAGGTCTGACAGCAACTGTAGATGCACCATaGTCTATTTGTCCAAAGGTTTATTGCATCTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GYTGLTATVDAP*SICPKVYCIFD Trigger: ATCAAAGATGCAATAAACCTTTGGACAAATAGAGCATGGTGCATCTACAGTTGCTGTCAGACCTGTGTAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051395.9 |
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