Pregenerated sensors for PRPSAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020528Ensembl transcript IDs: ENSMUST00000004955.14, ENSMUST00000168115.8
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGAAGATGTGGGAAAGGGAGGGTCACGTGTGTCTGGCCGGGCATaGGCCCTCCCAGCGTACACGCTGGGCTCCCACTTGACCTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: EEDVGKGGSRVSGRA*ALPAYTLGSHLTCG Trigger: CCCACAGGTCAAGTGGGAGCCCAGCGTGTACGCTGGGAGGGCCCATGCCCGGCCAGACACACGTGACCCTCCCTTTCCCACATCTTCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| 3UTR-3UTR CCA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTAGGGTCACGTGTGTCTaGCCGGGCATGGGCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFRVTCV*PGMGPP Trigger: GGGAGGGCCCATGCCCGGCCAGACACACGTGACCCT...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTCGCTGGGCTCCCACTTaGCCTGTGGGAGTTCTACCA | + |
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Preference number: 2 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFRWAPT*PVGVLP Trigger: TGGTAGAACTCCCACAGGTCAAGTGGGAGCCCAGCG...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| 3UTR-3UTR TCA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCACGCTGGGCTCCCACTTaGCCTGTGGGAGTTCTACCA | + |
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Preference number: 2 (lower is better) Translates to: NTATYSICPFIKAFLKRSRWAPT*PVGVLP Trigger: TGGTAGAACTCCCACAGGTCAAGTGGGAGCCCAGCG...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGCTCCCACTTGACCTGTaGGAGTTCTACCATAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: RSCVGTNSSFLILGSRQQLPLDL*EFYHRR Trigger: TCTCCTATGGTAGAACTCCCACAGGTCAAGTGGGAG...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| 3UTR-3UTR CCA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTCTCCCACTTGACCTGTaGGAGTTCTACCATAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFLPLDL*EFYHRR Trigger: TCTCCTATGGTAGAACTCCCACAGGTCAAGTGGGAG...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| 3UTR-3UTR CAA 90 bp | TCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACACGCTGGGCTCCCACTaGACCTGTGGGAGTTCTACC | + |
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Preference number: 3 (lower is better) Translates to: SICPFIKAFLKRSCVGTNTLGSH*TCGSST Trigger: GGTAGAACTCCCACAGGTCAAGTGGGAGCCCAGCGT...GTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| 3UTR-3UTR CAA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCAACGCTGGGCTCCCACTaGACCTGTGGGAGTTCTACC | + |
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Preference number: 3 (lower is better) Translates to: NTATYSICPFIKAFLKRSTLGSH*TCGSST Trigger: GGTAGAACTCCCACAGGTCAAGTGGGAGCCCAGCGT...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| 3UTR-3UTR CAA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGTTAAAAAGCTGGTCCTaGTACCTTCACAGGAATGAA | + |
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Preference number: 3 (lower is better) Translates to: RSCVGTNSSFLILGSRQQLKSWS*YLHRNE Trigger: TTCATTCCTGTGAAGGTACAAGGACCAGCTTTTTAA...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| 3UTR-3UTR CAA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTTTAAAAAGCTGGTCCTaGTACCTTCACAGGAATGAA | + |
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Preference number: 3 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFLKSWS*YLHRNE Trigger: TTCATTCCTGTGAAGGTACAAGGACCAGCTTTTTAA...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | GAGGAAGATGTGGGAAAGGGAGGGTCACGTGTGTCTGGCCGGGCATGGGCCCTCATGGACTCCCCGTTGTaGATTCGGCGGATGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: EEDVGKGGSRVSGRAWALMDSPL*IRRMAS Trigger: AGAAGCCATCCGCCGAATTCACAACGGGGAGTCCAT...GAGGGCCCATGCCCGGCCAGACACACGTGACCCTCCCTTTCCCACATCTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR GCA 90 bp | GAGGAAGATGTGGGAAAGGGAGGGTCACGTGTGTCTGGCCGGGCATGGGCCCTCTTGATCTTGGGGCACTaGAGCTTCTGGATCTCGTGT | + |
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Preference number: 4 (lower is better) Translates to: EEDVGKGGSRVSGRAWALLILGH*SFWISC Trigger: ACACGAGATCCAGAAGCTGCAGTGCCCCAAGATCAA...GAGGGCCCATGCCCGGCCAGACACACGTGACCCTCCCTTTCCCACATCTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | GAGGAAGATGTGGGAAAGGGAGGGTCACGTGTGTCTGGCCGGGCATGGGCCCTCGAGACTTGGCCACGATaGCTGCATTCCTATAATCTG | + |
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Preference number: 4 (lower is better) Translates to: EEDVGKGGSRVSGRAWALETWPR*LHSYNL Trigger: CAGATTATAGGAATGCAGTCATCGTGGCCAAGTCTC...GAGGGCCCATGCCCGGCCAGACACACGTGACCCTCCCTTTCCCACATCTTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | GAGGAAGATGTGGGAAAGGGAGGGTCACGTGTGTCTGGCCGGGCATGGGCCCTCAGAAGCCAGCAATTTTaGGACAATGGAGCCCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: EEDVGKGGSRVSGRAWALRSQQF*DNGAPF Trigger: AAAAGGGGCTCCATTGTCTCAAAATTGCTGGCTTCT...GAGGGCCCATGCCCGGCCAGACACACGTGACCCTCCCTTTCCCACATCTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | GAGGAAGATGTGGGAAAGGGAGGGTCACGTGTGTCTGGCCGGGCATGGGCCCTCACACGAGGCCTCCTTTaGTTATGTTCATCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: EEDVGKGGSRVSGRAWALTRGLL*LCSSWF Trigger: AAACCAAGATGAACATAACCAAAGGAGGCCTCGTGT...GAGGGCCCATGCCCGGCCAGACACACGTGACCCTCCCTTTCCCACATCTTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGTTGTGCCCTCTTGGCTaGGGCTGGAGACTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSCVGTNSSFLILGSRQQLCPLG*GWRLGH Trigger: GTGGCCAAGTCTCCAGCCTCAGCCAAGAGGGCACAA...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGTCGGGATCTCCAGGCTaGGATGGATGGCAGCTACAC | + |
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Preference number: 4 (lower is better) Translates to: RSCVGTNSSFLILGSRQQSGSPG*DGWQLH Trigger: GTGTAGCTGCCATCCATCCCAGCCTGGAGATCCCGA...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR GCA 90 bp | TGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCACCATTGGTGGGGAGTaGCGGCCATCCACCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: CPFIKAFLKRSCVGTNSSTIGGE*RPSTKS Trigger: TGACTTGGTGGATGGCCGGCACTCCCCACCAATGGT...GCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGATCTCCAGGCTGGGATaGATGGCAGCTACACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RSCVGTNSSFLILGSRQQISRLG*MAATLL Trigger: CAGGAGTGTAGCTGCCATCCATCCCAGCCTGGAGAT...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | TACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTTGTGCCCTCTTGGCTaGGGCTGGAGACTTGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YSHILYMPIYKSVPKKVMLCPLG*GWRLGH Trigger: GTGGCCAAGTCTCCAGCCTCAGCCAAGAGGGCACAA...CATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGAAGATTGTGCCCTCTTaGCTGAGGCTGGAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: RSCVGTNSSFLILGSRQQKIVPS*LRLETW Trigger: CCAAGTCTCCAGCCTCAGCCAAGAGGGCACAATCTT...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR GCA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTACCATTGGTGGGGAGTaGCGGCCATCCACCAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFTIGGE*RPSTKS Trigger: TGACTTGGTGGATGGCCGGCACTCCCCACCAATGGT...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTTCGGGATCTCCAGGCTaGGATGGATGGCAGCTACAC | + |
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Preference number: 4 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFSGSPG*DGWQLH Trigger: GTGTAGCTGCCATCCATCCCAGCCTGGAGATCCCGA...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGTGTGAATTCGGCGGATaGCTTCTGAGAGGATCATGC | + |
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Preference number: 4 (lower is better) Translates to: RSCVGTNSSFLILGSRQQCEFGG*LLRGSC Trigger: GCATGATCCTCTCAGAAGCCATCCGCCGAATTCACA...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | TACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGAGGGGATCACTCCGATaGTGCTCTTGGCACATGAGG | + |
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Preference number: 4 (lower is better) Translates to: YSHILYMPIYKSVPKKVMRGSLR*CSWHMR Trigger: CCTCATGTGCCAAGAGCATCATCGGAGTGATCCCCT...CATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | TCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACTCGGCGGATGGCTTCTaGGAGGATCATGCTGATGTC | + |
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Preference number: 4 (lower is better) Translates to: SICPFIKAFLKRSCVGTNSADGF*EDHADV Trigger: GACATCAGCATGATCCTCTCAGAAGCCATCCGCCGA...GTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | TCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACATGGACTCCCCGTTGTaGATTCGGCGGATGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SICPFIKAFLKRSCVGTNMDSPL*IRRMAS Trigger: AGAAGCCATCCGCCGAATTCACAACGGGGAGTCCAT...GTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR GCA 90 bp | TGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCCTTCAGGGTCTCTGCTaGAGCAAGAAAGCTATCCAC | + |
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Preference number: 4 (lower is better) Translates to: CPFIKAFLKRSCVGTNSSLQGLC*SKKAIH Trigger: GTGGATAGCTTTCTTGCTGCAGCAGAGACCCTGAAG...GCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR GCA 90 bp | TGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTGATCTTGGGGCACTaGAGCTTCTGGATCTCGTGT | + |
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Preference number: 4 (lower is better) Translates to: CPFIKAFLKRSCVGTNSSLILGH*SFWISC Trigger: ACACGAGATCCAGAAGCTGCAGTGCCCCAAGATCAA...GCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGGATGCTCTTGGCACATaGGGTCTTACATGCATATAC | + |
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Preference number: 4 (lower is better) Translates to: RSCVGTNSSFLILGSRQQDALGT*GLTCIY Trigger: GTATATGCATGTAAGACCTCATGTGCCAAGAGCATC...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCAAGGGGATCACTCCGATaGTGCTCTTGGCACATGAGG | + |
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Preference number: 4 (lower is better) Translates to: NTATYSICPFIKAFLKRSRGSLR*CSWHMR Trigger: CCTCATGTGCCAAGAGCATCATCGGAGTGATCCCCT...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATCGGCGGATGGCTTCTaGGAGGATCATGCTGATGTC | + |
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Preference number: 4 (lower is better) Translates to: NTATYSICPFIKAFLKRSSADGF*EDHADV Trigger: GACATCAGCATGATCCTCTCAGAAGCCATCCGCCGA...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | TCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAAGATTGTGCCCTCTTaGCTGAGGCTGGAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: SICPFIKAFLKRSCVGTNKIVPS*LRLETW Trigger: CCAAGTCTCCAGCCTCAGCCAAGAGGGCACAATCTT...GTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | TGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCGATGCTCTTGGCACATaGGGTCTTACATGCATATAC | + |
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Preference number: 4 (lower is better) Translates to: CPFIKAFLKRSCVGTNSSDALGT*GLTCIY Trigger: GTATATGCATGTAAGACCTCATGTGCCAAGAGCATC...GCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | TACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGGAGGATAACAAGCCGTaGGTGGCCATCACAAAGATC | + |
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Preference number: 4 (lower is better) Translates to: YSHILYMPIYKSVPKKVMEDNKP*VAITKI Trigger: GATCTTTGTGATGGCCACTCACGGCTTGTTATCCTC...CATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGCTAAGCCTATGTTTCTaGAAAGGTAGGACATGGACT | + |
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Preference number: 4 (lower is better) Translates to: RSCVGTNSSFLILGSRQQLSLCF*KGRTWT Trigger: AGTCCATGTCCTACCTTTTCAGAAACATAGGCTTAG...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR GCA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTCTTCAGGGTCTCTGCTaGAGCAAGAAAGCTATCCAC | + |
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Preference number: 4 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFLQGLC*SKKAIH Trigger: GTGGATAGCTTTCTTGCTGCAGCAGAGACCCTGAAG...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | TCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACCCACCACCTCATCAATaGCAGACTCTTCAATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SICPFIKAFLKRSCVGTNPPPHQ*QTLQSA Trigger: GGCTGATTGAAGAGTCTGCCATTGATGAGGTGGTGG...GTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | TACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGGAGACTTGGCCACGATaGCTGCATTCCTATAATCTG | + |
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Preference number: 4 (lower is better) Translates to: YSHILYMPIYKSVPKKVMETWPR*LHSYNL Trigger: CAGATTATAGGAATGCAGTCATCGTGGCCAAGTCTC...CATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR TCA 90 bp | TGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCCTAAGCCTATGTTTCTaGAAAGGTAGGACATGGACT | + |
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Preference number: 4 (lower is better) Translates to: CPFIKAFLKRSCVGTNSSLSLCF*KGRTWT Trigger: AGTCCATGTCCTACCTTTTCAGAAACATAGGCTTAG...GCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCACCACCACCTCATCAATaGCAGACTCTTCAATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: NTATYSICPFIKAFLKRSPPPHQ*QTLQSA Trigger: GGCTGATTGAAGAGTCTGCCATTGATGAGGTGGTGG...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGAATTCGGCGGATaGCTTCTGAGAGGATCATGC | + |
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Preference number: 4 (lower is better) Translates to: NTATYSICPFIKAFLKRSCEFGG*LLRGSC Trigger: GCATGATCCTCTCAGAAGCCATCCGCCGAATTCACA...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR GCA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGTCATTTTGCATTGCTTaGTATAAGGAAAGTAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: RSCVGTNSSFLILGSRQQSFCIA*YKESRG Trigger: TCCCCTACTTTCCTTATAGCAAGCAATGCAAAATGA...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR GCA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTCTTGGCCACGATGACTaGATTCCTATAATCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFLGHDD*IPIIWD Trigger: ATCCCAGATTATAGGAATGCAGTCATCGTGGCCAAG...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR GCA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCACTTGGCCACGATGACTaGATTCCTATAATCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: NTATYSICPFIKAFLKRSLGHDD*IPIIWD Trigger: ATCCCAGATTATAGGAATGCAGTCATCGTGGCCAAG...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | TCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACACACGAGGCCTCCTTTaGTTATGTTCATCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SICPFIKAFLKRSCVGTNTRGLL*LCSSWF Trigger: AAACCAAGATGAACATAACCAAAGGAGGCCTCGTGT...GTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTCCCTGGATTTCCTTCTaGTGTAAATCCATAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFPWISF*CKSIVM Trigger: CATCACTATGGATTTACACCAGAAGGAAATCCAGGG...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTACCAACAACTGTGATTaGGGGCTTCTCTTTAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFTNNCD*GLLFRN Trigger: ATTCCTAAAGAGAAGCCCCCAATCACAGTTGTTGGT...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | TCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACATAACAAGCCGTGAGTaGCCATCACAAAGATCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SICPFIKAFLKRSCVGTNITSRE*PSQRSC Trigger: ACAAGATCTTTGTGATGGCCACTCACGGCTTGTTAT...GTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCACCCTGGATTTCCTTCTaGTGTAAATCCATAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: NTATYSICPFIKAFLKRSPWISF*CKSIVM Trigger: CATCACTATGGATTTACACCAGAAGGAAATCCAGGG...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCAATAACAAGCCGTGAGTaGCCATCACAAAGATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTATYSICPFIKAFLKRSITSRE*PSQRSC Trigger: ACAAGATCTTTGTGATGGCCACTCACGGCTTGTTAT...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CCA 90 bp | TACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGATATTGAAGAAGCCCTaGATTTCCTTCTGGTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: YSHILYMPIYKSVPKKVMILKKP*ISFWCK Trigger: TTTACACCAGAAGGAAATCCAGGGCTTCTTCAATAT...CATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CCA 90 bp | CGGGATCTCCAGGCTGGGATGGATGGCAGCTACACTCCTGACCATTaGTGGGGAGTGCCGGCCATCCACCAAGTCAGACTCAGCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RDLQAGMDGSYTPDH*WGVPAIHQVRLSIL Trigger: CAGGATGCTGAGTCTGACTTGGTGGATGGCCGGCACTCCCCACCAATGGTCAGGAGTGTAGCTGCCATCCATCCCAGCCTGGAGATCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS TCA 90 bp | TCAGCATCGGGATCTCCAGGCTGGGATGGATGGCAGCTACACTCCTaGCCATTGGTGGGGAGTGCCGGCCATCCACCAAGTCAGACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SASGSPGWDGWQLHS*PLVGSAGHPPSQTQ Trigger: CTGAGTCTGACTTGGTGGATGGCCGGCACTCCCCACCAATGGTCAGGAGTGTAGCTGCCATCCATCCCAGCCTGGAGATCCCGATGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CCA 90 bp | GATCTCCAGGCTGGGATGGATGGCAGCTACACTCCTGACCATTGGTaGGGAGTGCCGGCCATCCACCAAGTCAGACTCAGCATCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DLQAGMDGSYTPDHW*GVPAIHQVRLSILC Trigger: GCACAGGATGCTGAGTCTGACTTGGTGGATGGCCGGCACTCCCCACCAATGGTCAGGAGTGTAGCTGCCATCCATCCCAGCCTGGAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAGATGTGGGAAAGGGAGGGTCACGTGTGTCTGGCCGGGCATGGGCCCTCAAAGATTGTGCCCTCTaGGCTGAGGCTGGAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: EEDVGKGGSRVSGRAWALKDCAL*AEAGDL Trigger: CAAGTCTCCAGCCTCAGCCAAGAGGGCACAATCTTT...GAGGGCCCATGCCCGGCCAGACACACGTGACCCTCCCTTTCCCACATCTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS GCA 90 bp | AGGCTGGGATGGATGGCAGCTACACTCCTGACCATTGGTGGGGAGTaGCGGCCATCCACCAAGTCAGACTCAGCATCCTGTGCTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLGWMAATLLTIGGE*RPSTKSDSASCASP Trigger: TGGAGAAGCACAGGATGCTGAGTCTGACTTGGTGGATGGCCGGCACTCCCCACCAATGGTCAGGAGTGTAGCTGCCATCCATCCCAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CCA 90 bp | TGCCGGCCATCCACCAAGTCAGACTCAGCATCCTGTGCTTCTCCATaGATCACTGCGATTCCCAGACGTAGACGCTCTGCAAAAGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: CRPSTKSDSASCASP*ITAIPRRRRSAKDC Trigger: ACAATCTTTTGCAGAGCGTCTACGTCTGGGAATCGCAGTGATCCATGGAGAAGCACAGGATGCTGAGTCTGACTTGGTGGATGGCCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | AGGTCATGTGTTGGAACCAACAGTAGCTTTTTGATTCTAGGTAGTAGACAGCAGGCTGAGGCTGGAGACTaGGCCACGATGACTGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RSCVGTNSSFLILGSRQQAEAGD*ATMTAF Trigger: GAATGCAGTCATCGTGGCCAAGTCTCCAGCCTCAGC...CTGCTGTCTACTACCTAGAATCAAAAAGCTACTGTTGGTTCCAACACATGACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | TGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCCTGATGTCCACAGTCTaGATCTTGGGGCACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CPFIKAFLKRSCVGTNSSLMSTV*ILGHCS Trigger: GCTGCAGTGCCCCAAGATCAAGACTGTGGACATCAG...GCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | TACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGGCTGAGGCTGGAGACTaGGCCACGATGACTGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: YSHILYMPIYKSVPKKVMAEAGD*ATMTAF Trigger: GAATGCAGTCATCGTGGCCAAGTCTCCAGCCTCAGC...CATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS TCA 90 bp | CAAAAGATTGTGCCCTCTTGGCTGAGGCTGGAGACTTGGCCACGATaGCTGCATTCCTATAATCTGGGATCTCTTCTTGAATATATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QKIVPSWLRLETWPR*LHSYNLGSLLEYIV Trigger: TACAATATATTCAAGAAGAGATCCCAGATTATAGGAATGCAGTCATCGTGGCCAAGTCTCCAGCCTCAGCCAAGAGGGCACAATCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | TCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACTCCACAGTCTTGATCTaGGGGCACTGCAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SICPFIKAFLKRSCVGTNSTVLI*GHCSFW Trigger: CCAGAAGCTGCAGTGCCCCAAGATCAAGACTGTGGA...GTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTTCCACAGTCTTGATCTaGGGGCACTGCAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFSTVLI*GHCSFW Trigger: CCAGAAGCTGCAGTGCCCCAAGATCAAGACTGTGGA...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTCTGATGTCCACAGTCTaGATCTTGGGGCACTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFLMSTV*ILGHCS Trigger: GCTGCAGTGCCCCAAGATCAAGACTGTGGACATCAG...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CCA 90 bp | CCAGCCGCTCAGCAATTTTCTTTGAAAGCTCCATACATGATGAATTaGAATTTGCTGAAAACAACACGAGGCCTCCTTTGGTTATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAAQQFSLKAPYMMN*NLLKTTRGLLWLCS Trigger: TGAACATAACCAAAGGAGGCCTCGTGTTGTTTTCAGCAAATTCCAATTCATCATGTATGGAGCTTTCAAAGAAAATTGCTGAGCGGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCAAAAGATTGTGCCCTCTaGGCTGAGGCTGGAGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTATYSICPFIKAFLKRSKDCAL*AEAGDL Trigger: CAAGTCTCCAGCCTCAGCCAAGAGGGCACAATCTTT...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | TGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCGCCATCACAAAGATCTaGTATGCACCTCTTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CPFIKAFLKRSCVGTNSSAITKI*YAPLSF Trigger: GAAGGAAAGAGGTGCATACAAGATCTTTGTGATGGC...GCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CCA 90 bp | TACATGATGAATTGGAATTTGCTGAAAACAACACGAGGCCTCCTTTaGTTATGTTCATCTTGGTTTCTAATTCAGGAGGCGCCACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: YMMNWNLLKTTRGLL*LCSSWFLIQEAPHK Trigger: TTTGTGTGGCGCCTCCTGAATTAGAAACCAAGATGAACATAACCAAAGGAGGCCTCGTGTTGTTTTCAGCAAATTCCAATTCATCATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | TACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGAACACGAGGCCTCCTTaGGTTATGTTCATCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: YSHILYMPIYKSVPKKVMNTRPP*VMFILV Trigger: AACCAAGATGAACATAACCAAAGGAGGCCTCGTGTT...CATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTAACACGAGGCCTCCTTaGGTTATGTTCATCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFNTRPP*VMFILV Trigger: AACCAAGATGAACATAACCAAAGGAGGCCTCGTGTT...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | CCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACAGTAGCTTTGCCATCACAAAGATCTaGTATGCACCTCTTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFIKAFLKRSCVGTNSSFAITKI*YAPLSF Trigger: GAAGGAAAGAGGTGCATACAAGATCTTTGTGATGGC...AAAGCTACTGTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | TCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATGTGTTGGAACCAACATGATGAATTGGAATTaGCTGAAAACAACACGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SICPFIKAFLKRSCVGTNMMNWN*LKTTRG Trigger: GCCTCGTGTTGTTTTCAGCAAATTCCAATTCATCAT...GTTGGTTCCAACACATGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCATTATCCACTGGAATATaGAAGAAGCCCTGGATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NTATYSICPFIKAFLKRSLSTGI*KKPWIS Trigger: GGAAATCCAGGGCTTCTTCAATATTCCAGTGGATAA...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS-3UTR CAA 90 bp | AATACAGCCACATACTCTATATGCCCATTTATAAAAGCGTTCCTAAAAAGGTCAATGATGAATTGGAATTaGCTGAAAACAACACGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: NTATYSICPFIKAFLKRSMMNWN*LKTTRG Trigger: GCCTCGTGTTGTTTTCAGCAAATTCCAATTCATCAT...TGACCTTTTTAGGAACGCTTTTATAAATGGGCATATAGAGTATGTGGCTGTATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CCA 72 bp | GCTGGGATGGATGGCAGCTACACTCCTGACCATTGGTaGGGAGTGCCGGCCATCCACCAAGTCAGACTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGMDGSYTPDHW*GVPAIHQVRLS Trigger: GCTGAGTCTGACTTGGTGGATGGCCGGCACTCCCCACCAATGGTCAGGAGTGTAGCTGCCATCCATCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CCA 72 bp | CAGGCTGGGATGGATGGCAGCTACACTCCTGACCATTaGTGGGGAGTGCCGGCCATCCACCAAGTCAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: QAGMDGSYTPDH*WGVPAIHQVRL Trigger: GAGTCTGACTTGGTGGATGGCCGGCACTCCCCACCAATGGTCAGGAGTGTAGCTGCCATCCATCCCAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CAA 72 bp | CCCAGACGTAGACGCTCTGCAAAAGATTGTGCCCTCTaGGCTGAGGCTGGAGACTTGGCCACGATGACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PRRRRSAKDCAL*AEAGDLATMTA Trigger: TGCAGTCATCGTGGCCAAGTCTCCAGCCTCAGCCAAGAGGGCACAATCTTTTGCAGAGCGTCTACGTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CCA 72 bp | TCTTTAGGAATCAGCATCGGGATCTCCAGGCTGGGATaGATGGCAGCTACACTCCTGACCATTGGTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SLGISIGISRLG*MAATLLTIGGE Trigger: CTCCCCACCAATGGTCAGGAGTGTAGCTGCCATCCATCCCAGCCTGGAGATCCCGATGCTGATTCCTAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CCA 72 bp | TCCACCAAGTCAGACTCAGCATCCTGTGCTTCTCCATaGATCACTGCGATTCCCAGACGTAGACGCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: STKSDSASCASP*ITAIPRRRRSA Trigger: TGCAGAGCGTCTACGTCTGGGAATCGCAGTGATCCATGGAGAAGCACAGGATGCTGAGTCTGACTTGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS TCA 72 bp | GTGCCCTCTTGGCTGAGGCTGGAGACTTGGCCACGATaGCTGCATTCCTATAATCTGGGATCTCTTCTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VPSWLRLETWPR*LHSYNLGSLLE Trigger: TTCAAGAAGAGATCCCAGATTATAGGAATGCAGTCATCGTGGCCAAGTCTCCAGCCTCAGCCAAGAGGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CAA 72 bp | GAATTGGAATTTGCTGAAAACAACACGAGGCCTCCTTaGGTTATGTTCATCTTGGTTTCTAATTCAGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ELEFAENNTRPP*VMFILVSNSGG Trigger: GCCTCCTGAATTAGAAACCAAGATGAACATAACCAAAGGAGGCCTCGTGTTGTTTTCAGCAAATTCCAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CAA 90 bp | ATACATGATGAATTGGAATTTGCTGAAAACAACACGAGGCCTCCTTaGGTTATGTTCATCTTGGTTTCTAATTCAGGAGGCGCCACACAA | + |
|
Preference number: 6 (lower is better) Translates to: IHDELEFAENNTRPP*VMFILVSNSGGATQ Trigger: TTGTGTGGCGCCTCCTGAATTAGAAACCAAGATGAACATAACCAAAGGAGGCCTCGTGTTGTTTTCAGCAAATTCCAATTCATCATGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CAA 90 bp | GCTCAGCAATTTTCTTTGAAAGCTCCATACATGATGAATTGGAATTaGCTGAAAACAACACGAGGCCTCCTTTGGTTATGTTCATCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: AQQFSLKAPYMMNWN*LKTTRGLLWLCSSW Trigger: CCAAGATGAACATAACCAAAGGAGGCCTCGTGTTGTTTTCAGCAAATTCCAATTCATCATGTATGGAGCTTTCAAAGAAAATTGCTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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| CDS CAA 72 bp | TTTTCTTTGAAAGCTCCATACATGATGAATTGGAATTaGCTGAAAACAACACGAGGCCTCCTTTGGTTATGT | + |
|
Preference number: 6 (lower is better) Translates to: FSLKAPYMMNWN*LKTTRGLLWLC Trigger: ACATAACCAAAGGAGGCCTCGTGTTGTTTTCAGCAAATTCCAATTCATCATGTATGGAGCTTTCAAAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004955.14 ENSMUST00000168115.8 |
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