Pregenerated sensors for PRPS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025742Ensembl transcript IDs: ENSMUST00000026839.5
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TACACACACACACACACACACACACACACACACACACACACACACTaGGCTATCTCCATGTGGGTATGCACAAGAATGTCTTCAGCACAG | + |
|
Preference number: 1 (lower is better) Translates to: YTHTHTHTHTHTHTH*AISMWVCTRMSSAQ Trigger: CTGTGCTGAAGACATTCTTGTGCATACCCACATGGAGATAGCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR TCA 90 bp | TCCATTATGTTTCTTTACCACAAGCAGCAAGGAACAAGAAAGTTCTaGAATAAGGCTGCTCATGAGGCAGCCTTCGTCATTTTAGCCAAA | + |
|
Preference number: 1 (lower is better) Translates to: SIMFLYHKQQGTRKF*NKAAHEAAFVILAK Trigger: TTTGGCTAAAATGACGAAGGCTGCCTCATGAGCAGCCTTATTTCAGAACTTTCTTGTTCCTTGCTGCTTGTGGTAAAGAAACATAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR TCA 90 bp | ACAAAGGGCCAAAGGACATTTAACTCAAGCTCAGTAAGCTCTGTTTaGATAAGTGTATTTGGTGGCACTCTTAAATCCTCCCCATTTTAT | + |
|
Preference number: 1 (lower is better) Translates to: TKGQRTFNSSSVSSV*ISVFGGTLKSSPFY Trigger: ATAAAATGGGGAGGATTTAAGAGTGCCACCAAATACACTTATTCAAACAGAGCTTACTGAGCTTGAGTTAAATGTCCTTTGGCCCTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR CAA 90 bp | CCACCACCTTTCTCTGCCCTCCCCCAGGACTGGAAAGTAGTAGTCTaGAGCTTTAGAAGGAGAGACAGAGGGCTCTTAGAGTGGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: PPPFSALPQDWKVVV*SFRRRDRGLLEWTQ Trigger: CTGTGTCCACTCTAAGAGCCCTCTGTCTCTCCTTCTAAAGCTCAAGACTACTACTTTCCAGTCCTGGGGGAGGGCAGAGAAAGGTGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTGCTACTCAGATGGATAGGAATTTCTTACCTGCAAAATTTAGGGCTGGGACTCTCCAGGCCAAGCTaGGCTGGAACTCACTGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: SVLLRWIGISYLQNLGLGLSRPS*AGTHCV Trigger: TACACAGTGAGTTCCAGCTCAGCTTGGCCTGGAGAG...TCCCAGCCCTAAATTTTGCAGGTAAGAAATTCCTATCCATCTGAGTAGCACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGCTTTTGTCATGCCAATGCTTTGGGACATGTACACACACACACACACACAATGTCTAACCAAGCCTaGGACAGACTGTACCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: TGFCHANALGHVHTHTHTMSNQA*DRLYHR Trigger: TCTGTGGTACAGTCTGTCTCAGGCTTGGTTAGACAT...TGTGTGTGTGTGTGTGTGTACATGTCCCAAAGCATTGGCATGACAAAAGCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCTGGCTCCCCTTTTTGGGTAGATATGACTAACATGCTCTCCTTACATAGACACACACACACACACTaGGCTATCTCCATGTGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: FPGSPFWVDMTNMLSLHRHTHTH*AISMWV Trigger: TACCCACATGGAGATAGCTCAGTGTGTGTGTGTGTG...TCTATGTAAGGAGAGCATGTTAGTCATATCTACCCAAAAAGGGGAGCCAGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAATGCCACCCACAATGAGATTCTTCTTCACAATGCTTTCTGAAGCATTTCTTGCCCTCCCCCAGGACTaGAAAGTAGTAGTCTTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: RMPPTMRFFFTMLSEAFLALPQD*KVVVLS Trigger: GCTCAAGACTACTACTTTCCAGTCCTGGGGGAGGGC...AAGAAATGCTTCAGAAAGCATTGTGAAGAAGAATCTCATTGTGGGTGGCATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCTGGCTCCCCTTTTTGGGTAGATATGACTAACATGCTCTCCTTACATAGATTGCCTCCACTGTTTTaGAACCCTCTCCTGTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: FPGSPFWVDMTNMLSLHRLPPLF*NPLLST Trigger: TGTAGACAGGAGAGGGTTGCAAAACAGTGGAGGCAA...TCTATGTAAGGAGAGCATGTTAGTCATATCTACCCAAAAAGGGGAGCCAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGCTTTTGTCATGCCAATGCTTTGGGACATGTACACACACACACACACACATCAGTAAGCTCTGTTTaGATAAGTGTATTTGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TGFCHANALGHVHTHTHTSVSSV*ISVFGG Trigger: GCCACCAAATACACTTATTCAAACAGAGCTTACTGA...TGTGTGTGTGTGTGTGTGTACATGTCCCAAAGCATTGGCATGACAAAAGCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGCTTTTGTCATGCCAATGCTTTGGGACATGTACACACACACACACACACATTCCAAGGTTCTCTCTaGCATAAAGGTTATTTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: TGFCHANALGHVHTHTHTFQGSL*HKGYLG Trigger: TCCTAAATAACCTTTATGTCAGAGAGAACCTTGGAA...TGTGTGTGTGTGTGTGTGTACATGTCCCAAAGCATTGGCATGACAAAAGCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR TCA 90 bp | CTGGTTGAGTGTGCTACTCAGATGGATAGGAATTTCTTACCTGCAAAATTTAGGCAGAAGGCTTTCATTTaGAATCACCTTTGGCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: LVECATQMDRNFLPAKFRQKAFI*NHLWHP Trigger: AGGATGCCAAAGGTGATTTCAAATGAAAGCCTTCTG...CCTAAATTTTGCAGGTAAGAAATTCCTATCCATCTGAGTAGCACACTCAACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTGCTGGTTGAGTGTGCTACTCAGATGGATAGGAATTTCTTACCTGCAAAAAGGTTGTGCACTTACTaGTGCCTTTTGTTTGTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: RVLVECATQMDRNFLPAKRLCTY*CLLFVC Trigger: ACAAACAAACAAAAGGCATCAGTAAGTGCACAACCT...TTTTGCAGGTAAGAAATTCCTATCCATCTGAGTAGCACACTCAACCAGCACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGGGATTACGGGCACAGACCTCCACACTTCACTAAAAGATCATTTTATCAAGAGCCTTTCTTTTGGTaGACATCTACAACAAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CWDYGHRPPHFTKRSFYQEPFFW*TSTTRN Trigger: GTTTCTTGTTGTAGATGTCCACCAAAAGAAAGGCTC...TTGATAAAATGATCTTTTAGTGAAGTGTGGAGGTCTGTGCCCGTAATCCCAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCTGGCTCCCCTTTTTGGGTAGATATGACTAACATGCTCTCCTTACATAGATTGTGGTACTCTTCCTaGATTAGTTTTAAAGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FPGSPFWVDMTNMLSLHRLWYSS*ISFKVL Trigger: CAGCACTTTAAAACTAATGCAGGAAGAGTACCACAA...TCTATGTAAGGAGAGCATGTTAGTCATATCTACCCAAAAAGGGGAGCCAGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTGCTGGTTGAGTGTGCTACTCAGATGGATAGGAATTTCTTACCTGCAAAAACAACAAGAAACTATTaGGGAATGTGGAAAGTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RVLVECATQMDRNFLPAKTTRNY*GMWKVK Trigger: CTTTACTTTCCACATTCCCCAATAGTTTCTTGTTGT...TTTTGCAGGTAAGAAATTCCTATCCATCTGAGTAGCACACTCAACCAGCACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CCA 90 bp | AGTTGGACAGAGCTGATCTATTTGGTAATTTCCATTATGTTTCTTTACCACAAGAAGGACAGAAACAATTaGTTCTCAAATTCAGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SWTELIYLVISIMFLYHKKDRNN*FSNSED Trigger: GTCCTCTGAATTTGAGAACCAATTGTTTCTGTCCTT...CTTGTGGTAAAGAAACATAATGGAAATTACCAAATAGATCAGCTCTGTCCAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR TCA 72 bp | ACACACACACACACACACACACACACACACACACACTaGGCTATCTCCATGTGGGTATGCACAAGAATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: THTHTHTHTHTH*AISMWVCTRMS Trigger: AGACATTCTTGTGCATACCCACATGGAGATAGCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGACAGACTGTACCACAGAGCTGAGCATCCCAGGTTATAGGAACCACTTTCTCAGTAAGCTCTGTTaGAATAAGTGTATTTGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PETDCTTELSIPGYRNHFLSKLC*NKCIWW Trigger: CCACCAAATACACTTATTCAAACAGAGCTTACTGAG...AAAGTGGTTCCTATAACCTGGGATGCTCAGCTCTGTGGTACAGTCTGTCTCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGACAGACTGTACCACAGAGCTGAGCATCCCAGGTTATAGGAACCACTTTCATTTGAAATCACCTTaGGCATCCTCAAAATGTATG | + |
|
Preference number: 3 (lower is better) Translates to: PETDCTTELSIPGYRNHFHLKSP*ASSKCM Trigger: CATACATTTTGAGGATGCCAAAGGTGATTTCAAATG...AAAGTGGTTCCTATAACCTGGGATGCTCAGCTCTGTGGTACAGTCTGTCTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR CCA 72 bp | ACTTGTGGTACTCTTCCTGCATTAGTTTTAAAGTGCTaGGATTACGGGCACAGACCTCCACACTTCACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TCGTLPALVLKC*DYGHRPPHFTK Trigger: TTTAGTGAAGTGTGGAGGTCTGTGCCCGTAATCCCAGCACTTTAAAACTAATGCAGGAAGAGTACCACAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTGGCTCCCCTTTTTGGGTAGATATGACTAACATGCTCTCCTTACATAGACAAGGAGCCTTTCTTTaGGTGGACATCTACAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: FPGSPFWVDMTNMLSLHRQGAFL*VDIYNK Trigger: CTTGTTGTAGATGTCCACCAAAAGAAAGGCTCCTTG...TCTATGTAAGGAGAGCATGTTAGTCATATCTACCCAAAAAGGGGAGCCAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR TCA 72 bp | TTTCTTTACCACAAGCAGCAAGGAACAAGAAAGTTCTaGAATAAGGCTGCTCATGAGGCAGCCTTCGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: FLYHKQQGTRKF*NKAAHEAAFVI Trigger: AATGACGAAGGCTGCCTCATGAGCAGCCTTATTTCAGAACTTTCTTGTTCCTTGCTGCTTGTGGTAAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR GCA 72 bp | GATAAAATGATTACCAACTGGCTTTTGTCATGCCAATaGTTTGGGACATGTACACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: DKMITNWLLSCQ*FGTCTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTACATGTCCCAAAGCATTGGCATGACAAAAGCCAGTTGGTAATCATTTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR CCA 72 bp | ATAGGACATGAGCTACATTCTAAAGAGAAATTCCCCTaGGATAGACAAAGTTGTGCATCAACGTGGTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: IGHELHSKEKFP*DRQSCASTWSQ Trigger: TTGTGACCACGTTGATGCACAACTTTGTCTATCCCAGGGGAATTTCTCTTTAGAATGTAGCTCATGTCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGACAGAGCTGATCTATTTGGTAATTTCCATTATGTTTCTTTACCACAAGAAAGACAGTGAGAAGTaGGAGGAGGCTTGCTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: SWTELIYLVISIMFLYHKKDSEK*EEACSI Trigger: GATGGAGCAAGCCTCCTCCAACTTCTCACTGTCTTT...CTTGTGGTAAAGAAACATAATGGAAATTACCAAATAGATCAGCTCTGTCCAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAATTGGTTCTCAAATTCAGAGGACAGCCAGGCAGATTTTTATGACAGGGTTTACAGAAGGCTTTCATTaGAAATCACCTTTGGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: TIGSQIQRTARQIFMTGFTEGFH*KSPLAS Trigger: GGATGCCAAAGGTGATTTCAAATGAAAGCCTTCTGT...AAACCCTGTCATAAAAATCTGCCTGGCTGTCCTCTGAATTTGAGAACCAATTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGACAGAGCTGATCTATTTGGTAATTTCCATTATGTTTCTTTACCACAAGTTTGCCTCCACTGTTTaGCAACCCTCTCCTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SWTELIYLVISIMFLYHKFASTV*QPSPVY Trigger: GTAGACAGGAGAGGGTTGCAAAACAGTGGAGGCAAA...CTTGTGGTAAAGAAACATAATGGAAATTACCAAATAGATCAGCTCTGTCCAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR TCA 72 bp | CAAAGGACATTTAACTCAAGCTCAGTAAGCTCTGTTTaGATAAGTGTATTTGGTGGCACTCTTAAATCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QRTFNSSSVSSV*ISVFGGTLKSS Trigger: GGAGGATTTAAGAGTGCCACCAAATACACTTATTCAAACAGAGCTTACTGAGCTTGAGTTAAATGTCCTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR GCA 72 bp | ATCTTAGATAAAATGATTACCAACTGGCTTTTGTCATaGCAATGCTTTGGGACATGTACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: ILDKMITNWLLS*QCFGTCTHTHT Trigger: TGTGTGTGTGTGTGTACATGTCCCAAAGCATTGGCATGACAAAAGCCAGTTGGTAATCATTTTATCTAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR CCA 72 bp | CCTTTCTTTTGGTGGACATCTACAACAAGAAACTATTaGGGAATGTGGAAAGTAAAGGCTATTGTTAACGTC | + |
|
Preference number: 3 (lower is better) Translates to: PFFWWTSTTRNY*GMWKVKAIVNV Trigger: GACGTTAACAATAGCCTTTACTTTCCACATTCCCCAATAGTTTCTTGTTGTAGATGTCCACCAAAAGAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGACAGAGCTGATCTATTTGGTAATTTCCATTATGTTTCTTTACCACAAGAACAGCTATTTACTTTaGCCTCCACTGTTTTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SWTELIYLVISIMFLYHKNSYLL*PPLFCN Trigger: GTTGCAAAACAGTGGAGGCAAAAGTAAATAGCTGTT...CTTGTGGTAAAGAAACATAATGGAAATTACCAAATAGATCAGCTCTGTCCAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR TCA 72 bp | ACTAAAAGATCATTTTATCAAGAATGCCACCCACAATaGGATTCTTCTTCACAATGCTTTCTGAAGCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: TKRSFYQECHPQ*DSSSQCFLKHF Trigger: GAAATGCTTCAGAAAGCATTGTGAAGAAGAATCTCATTGTGGGTGGCATTCTTGATAAAATGATCTTTTAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR TCA 90 bp | ATAACCACCACCTTTCTCTGCCCTCCCCCAGGACTGGAAAGTAGTAGTCTTGAGCGCAGCCACTCTGGATaGTGTAGACATCTTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITTTFLCPPPGLESSSLERSHSG*CRHLPL Trigger: GAGGGGAAGATGTCTACATCATCCAGAGTGGCTGCG...CTCAAGACTACTACTTTCCAGTCCTGGGGGAGGGCAGAGAAAGGTGGTGGTTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR CAA 72 bp | TTCTCTGCCCTCCCCCAGGACTGGAAAGTAGTAGTCTaGAGCTTTAGAAGGAGAGACAGAGGGCTCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSALPQDWKVVV*SFRRRDRGLLE Trigger: CTCTAAGAGCCCTCTGTCTCTCCTTCTAAAGCTCAAGACTACTACTTTCCAGTCCTGGGGGAGGGCAGAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CCA 90 bp | GACTGGAAAGTAGTAGTCTTGAGCTTTAGAAGGAGAGACAGAGGGCTCTTAGAGTCACAGCTGTCACCCTaGATGAGGACGCAATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DWKVVVLSFRRRDRGLLESQLSP*MRTQSC Trigger: GCAAGATTGCGTCCTCATCCAGGGTGACAGCTGTGA...CTCTAAGAGCCCTCTGTCTCTCCTTCTAAAGCTCAAGACTACTACTTTCCAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CCA 90 bp | ATAACCACCACCTTTCTCTGCCCTCCCCCAGGACTGGAAAGTAGTAGTCTTGAGAACTTATCTGCAGCATaGCAGATGGTACCACATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ITTTFLCPPPGLESSSLENLSAA*QMVPHV Trigger: TACATGTGGTACCATCTGCCATGCTGCAGATAAGTT...CTCAAGACTACTACTTTCCAGTCCTGGGGGAGGGCAGAGAAAGGTGGTGGTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR TCA 90 bp | TTTGCCTCCACTGTTTTGCAACCCTCTCCTGTCTACATTTTAGCAGCTTTAGAGACAGTGGGACATGGCTaGACAGATAGGACACGGATT | + |
|
Preference number: 4 (lower is better) Translates to: FASTVLQPSPVYILAALETVGHG*TDRTRI Trigger: AATCCGTGTCCTATCTGTTCAGCCATGTCCCACTGT...CTCTAAAGCTGCTAAAATGTAGACAGGAGAGGGTTGCAAAACAGTGGAGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR TCA 90 bp | CTGGTTGAGTGTGCTACTCAGATGGATAGGAATTTCTTACCTGCAAAATTTAGGAAGAAACCCTGGATCTaGGAGGCATGCAGGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LVECATQMDRNFLPAKFRKKPWI*EACRSM Trigger: CATGGACCTGCATGCCTCTCAGATCCAGGGTTTCTT...CCTAAATTTTGCAGGTAAGAAATTCCTATCCATCTGAGTAGCACACTCAACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR TCA 90 bp | AGTGTGCTACTCAGATGGATAGGAATTTCTTACCTGCAAAATTTAGGGCTGGGATTCTCCCGAATCCACTaGAGAACTGCAGGTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLLRWIGISYLQNLGLGFSRIH*RTAGSA Trigger: TGCAGAACCTGCAGTTCTTCAGTGGATTCGGGAGAA...TCCCAGCCCTAAATTTTGCAGGTAAGAAATTCCTATCCATCTGAGTAGCACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR TCA 90 bp | AGAATGCCACCCACAATGAGATTCTTCTTCACAATGCTTTCTGAAGCATTTCTTATCAGCCCCAGCAACTaGCAGCATATTGGCCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: RMPPTMRFFFTMLSEAFLISPSN*QHIGHK Trigger: CTTGTGGCCAATATGCTGTCAGTTGCTGGGGCTGAT...AAGAAATGCTTCAGAAAGCATTGTGAAGAAGAATCTCATTGTGGGTGGCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR TCA 90 bp | TTTCCTGGCTCCCCTTTTTGGGTAGATATGACTAACATGCTCTCCTTACATAGACAGTCTGTCTGCAATTaGTGTAACCCTTTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPGSPFWVDMTNMLSLHRQSVCN*CNPFGS Trigger: GGAGCCAAAAGGGTTACATCAATTGCAGACAGACTG...TCTATGTAAGGAGAGCATGTTAGTCATATCTACCCAAAAAGGGGAGCCAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CCA 90 bp | AGTGTGCTACTCAGATGGATAGGAATTTCTTACCTGCAAAATTTAGGGCTGGGATCGACACTGGTCTCCTaGTTGCTAAACTTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLLRWIGISYLQNLGLGSTLVS*LLNFLV Trigger: CACCAAGAAGTTTAGCAACCAGGAGACCAGTGTCGA...TCCCAGCCCTAAATTTTGCAGGTAAGAAATTCCTATCCATCTGAGTAGCACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CCA 90 bp | GACTGGAAAGTAGTAGTCTTGAGCTTTAGAAGGAGAGACAGAGGGCTCTTAGAGGGCTCCTCCAGCATCTaGAGAAACAATAATACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DWKVVVLSFRRRDRGLLEGSSSI*RNNNTV Trigger: AACTGTATTATTGTTTCTCCAGATGCTGGAGGAGCC...CTCTAAGAGCCCTCTGTCTCTCCTTCTAAAGCTCAAGACTACTACTTTCCAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CCA 90 bp | GACTGGAAAGTAGTAGTCTTGAGCTTTAGAAGGAGAGACAGAGGGCTCTTAGAGCATTTTGTCCTCTTGTaGAATTGTGTTGGTGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: DWKVVVLSFRRRDRGLLEHFVLL*NCVGDN Trigger: GTTGTCACCAACACAATTCCACAAGAGGACAAAATG...CTCTAAGAGCCCTCTGTCTCTCCTTCTAAAGCTCAAGACTACTACTTTCCAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR CAA 72 bp | ACAGATCAGATGCTTTTGCCAGTGATCATCCTAGAATaGCGGAGTCCTAATTCTAAAACAGCAGGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: TDQMLLPVIILE*RSPNSKTAGRQ Trigger: TTGTCTGCCTGCTGTTTTAGAATTAGGACTCCGCAATTCTAGGATGATCACTGGCAAAAGCATCTGATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR TCA 90 bp | CTGGTTGAGTGTGCTACTCAGATGGATAGGAATTTCTTACCTGCAAAATTTAGGGTGGAATTGTGTTGGTaGCAACAACAGCTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVECATQMDRNFLPAKFRVELCW*QQQLQR Trigger: CCTTTGAAGCTGTTGTTGTCACCAACACAATTCCAC...CCTAAATTTTGCAGGTAAGAAATTCCTATCCATCTGAGTAGCACACTCAACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CCA 90 bp | AGAGTGCTGGTTGAGTGTGCTACTCAGATGGATAGGAATTTCTTACCTGCAAAACAATCACCTGAATTTTaGAGCAGTGTTTCATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVLVECATQMDRNFLPAKQSPEF*SSVSFC Trigger: ACAAAATGAAACACTGCTCCAAAATTCAGGTGATTG...TTTTGCAGGTAAGAAATTCCTATCCATCTGAGTAGCACACTCAACCAGCACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR CAA 72 bp | TTAATGGAACAGCTATTTACTTTTGCCTCCACTGTTTaGCAACCCTCTCCTGTCTACATTTTAGCAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LMEQLFTFASTV*QPSPVYILAAL Trigger: TAAAGCTGCTAAAATGTAGACAGGAGAGGGTTGCAAAACAGTGGAGGCAAAAGTAAATAGCTGTTCCATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR TCA 90 bp | AGTTGGACAGAGCTGATCTATTTGGTAATTTCCATTATGTTTCTTTACCACAAGGAAATGTCAATCACCTaGATTTTGGAGCAGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SWTELIYLVISIMFLYHKEMSIT*ILEQCF Trigger: GAAACACTGCTCCAAAATTCAGGTGATTGACATTTC...CTTGTGGTAAAGAAACATAATGGAAATTACCAAATAGATCAGCTCTGTCCAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| 3UTR CAA 72 bp | GAAATGGTAGCCAAATCAGTGATCACTGATCATAATTaGGGAGTTTCCGGTAAGTTGTCATTTATGATATAT | + |
|
Preference number: 4 (lower is better) Translates to: EMVAKSVITDHN*GVSGKLSFMIY Trigger: ATATATCATAAATGACAACTTACCGGAAACTCCCAAATTATGATCAGTGATCACTGATTTGGCTACCATTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CAA 90 bp | TTTGCCTCCACTGTTTTGCAACCCTCTCCTGTCTACATTTTAGCAGCTTTAGAGACACTGGTCTCCTGGTaGCTAAACTTCTTGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: FASTVLQPSPVYILAALETLVSW*LNFLVT Trigger: GGTCACCAAGAAGTTTAGCAACCAGGAGACCAGTGT...CTCTAAAGCTGCTAAAATGTAGACAGGAGAGGGTTGCAAAACAGTGGAGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CAA 90 bp | CTGGTTGAGTGTGCTACTCAGATGGATAGGAATTTCTTACCTGCAAAATTTAGGCTTGTCCTTTTTATCTaGCCGGGCGTAGGGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LVECATQMDRNFLPAKFRLVLFI*PGVGEA Trigger: TGCTTCCCCTACGCCCGGCAAGATAAAAAGGACAAG...CCTAAATTTTGCAGGTAAGAAATTCCTATCCATCTGAGTAGCACACTCAACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CAA 90 bp | AGAATGCCACCCACAATGAGATTCTTCTTCACAATGCTTTCTGAAGCATTTCTTGACACGGATTCCCCATaGTGGGTTCTTCGAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RMPPTMRFFFTMLSEAFLDTDSP*WVLRMA Trigger: AGCCATTCGAAGAACCCACAATGGGGAATCCGTGTC...AAGAAATGCTTCAGAAAGCATTGTGAAGAAGAATCTCATTGTGGGTGGCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CAA 90 bp | AGAATGCCACCCACAATGAGATTCTTCTTCACAATGCTTTCTGAAGCATTTCTTGATGAGGACGCAATCTaGCACGCATTGATCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RMPPTMRFFFTMLSEAFLDEDAI*HALIMM Trigger: CATCATGATCAATGCGTGCAAGATTGCGTCCTCATC...AAGAAATGCTTCAGAAAGCATTGTGAAGAAGAATCTCATTGTGGGTGGCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CAA 90 bp | AGAATGCCACCCACAATGAGATTCTTCTTCACAATGCTTTCTGAAGCATTTCTTATTGGAGCACGACTCTaGTCCTTTTTATCTTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RMPPTMRFFFTMLSEAFLIGARL*SFLSCR Trigger: CCGGCAAGATAAAAAGGACAAGAGTCGTGCTCCAAT...AAGAAATGCTTCAGAAAGCATTGTGAAGAAGAATCTCATTGTGGGTGGCATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGGGATTACGGGCACAGACCTCCACACTTCACTAAAAGATCATTTTATCAAGAGCAGTGTTTCATTTaGTCCTCTTGTGGAATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CWDYGHRPPHFTKRSFYQEQCFI*SSCGIV Trigger: CACAATTCCACAAGAGGACAAAATGAAACACTGCTC...TTGATAAAATGATCTTTTAGTGAAGTGTGGAGGTCTGTGCCCGTAATCCCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS-3UTR CAA 90 bp | AGGAATTTCTTACCTGCAAAATTTAGGGCTGGGAATTTATCTACAATACTCAGCTTTCATTTTGTCCTCTaGTGGAATTGTGTTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RNFLPAKFRAGNLSTILSFHFVL*WNCVGD Trigger: GTCACCAACACAATTCCACAAGAGGACAAAATGAAA...GCTGAGTATTGTAGATAAATTCCCAGCCCTAAATTTTGCAGGTAAGAAATTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS CAA 72 bp | GGTATCACAGCTGTCACCCTGGATGAGGACGCAATCTaGCACGCATTGATCATGATGAGTAGCTCCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GITAVTLDEDAI*HALIMMSSSIR Trigger: CCTGATGGAGCTACTCATCATGATCAATGCGTGCAAGATTGCGTCCTCATCCAGGGTGACAGCTGTGATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS CAA 90 bp | GGGAAGCAGGGTATCACAGCTGTCACCCTGGATGAGGACGCAATCTaGCACGCATTGATCATGATGAGTAGCTCCATCAGGTTGTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: GKQGITAVTLDEDAI*HALIMMSSSIRLSL Trigger: TAATGACAACCTGATGGAGCTACTCATCATGATCAATGCGTGCAAGATTGCGTCCTCATCCAGGGTGACAGCTGTGATACCCTGCTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS CAA 72 bp | TTGCACGCATTGATCATGATGAGTAGCTCCATCAGGTaGTCATTAATCTCCCCGCAGCCACTCTGGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: LHALIMMSSSIR*SLISPQPLWMM Trigger: CATCATCCAGAGTGGCTGCGGGGAGATTAATGACAACCTGATGGAGCTACTCATCATGATCAATGCGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||
| CDS TCA 72 bp | AGTGTTTCATTTTGTCCTCTTGTGGAATTGTGTTGGTaGCAACAACAGCTTCAAAGGCAGCACTATTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: SVSFCPLVELCW*QQQLQRQHYLF Trigger: GAATAAATAGTGCTGCCTTTGAAGCTGTTGTTGTCACCAACACAATTCCACAAGAGGACAAAATGAAACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026839.5 |
||