Pregenerated sensors for PRPS1L3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079104

Ensembl transcript IDs: ENSMUST00000139049.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	TGCTCAACCACTGAACTATGTGTAAGGACGCTCAGGGTTCTTACTGTAGACCTCAGCATTCACATGCAATaGAGCATGAGCTTTGTCAAT	+
Preference number: 2 (lower is better) Translates to: CSTTELCVRTLRVLTVDLSIHMQ*SMSFVN Trigger: ATTGACAAAGCTCATGCTCCATTGCATGTGAATGCT...GAGGTCTACAGTAAGAACCCTGAGCGTCCTTACACATAGTTCAGTGGTTGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139049.2
3UTR-3UTR TCA 90 bp	CTTCCAAAAATTAATTACTGCATTGAGTTACCTACCCCTGCCTTACAGGATGCTACACCTTTCAAGAGCTaGGCTCAACTTAAAGCTGCA	+
Preference number: 2 (lower is better) Translates to: LPKINYCIELPTPALQDATPFKS*AQLKAA Trigger: TGCAGCTTTAAGTTGAGCTCAGCTCTTGAAAGGTGT...AGCATCCTGTAAGGCAGGGGTAGGTAACTCAATGCAGTAATTAATTTTTGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139049.2
3UTR-3UTR TCA 90 bp	CTTCCAAAAATTAATTACTGCATTGAGTTACCTACCCCTGCCTTACAGGATGCTACATGCAATGGAGCATaGGCTTTGTCAATCATGTCT	+
Preference number: 2 (lower is better) Translates to: LPKINYCIELPTPALQDATCNGA*ALSIMS Trigger: AGACATGATTGACAAAGCTCATGCTCCATTGCATGT...AGCATCCTGTAAGGCAGGGGTAGGTAACTCAATGCAGTAATTAATTTTTGGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000139049.2
3UTR TCA 72 bp	TGTGTAAGGACGCTCAGGGTTCTTACTGTAGACCTCTaGAAACGTACTACTCATGGGCTAGCTTTGTTGCTA	+
Preference number: 3 (lower is better) Translates to: CVRTLRVLTVDL*KRTTHGLALLL Trigger: TAGCAACAAAGCTAGCCCATGAGTAGTACGTTTTCAGAGGTCTACAGTAAGAACCCTGAGCGTCCTTACACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139049.2
CDS-3UTR TCA 90 bp	TGCTCAACCACTGAACTATGTGTAAGGACGCTCAGGGTTCTTACTGTAGACCTCCAAAGCATGCATTGTTaGTGCGAGAAATGGCAGGGC	+
Preference number: 4 (lower is better) Translates to: CSTTELCVRTLRVLTVDLQSMHC*CEKWQG Trigger: GCCCTGCCATTTCTCGCATCAACAATGCATGCTTTG...GAGGTCTACAGTAAGAACCCTGAGCGTCCTTACACATAGTTCAGTGGTTGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139049.2
CDS-3UTR CCA 90 bp	AGCATTCACATGCAATGGAGCATGAGCTTTGTCAATCATGTCTTAAGGACCATGTTCTGGGATAAGTCCTaGTGCGAGCTCCCGCTGAAG	+
Preference number: 4 (lower is better) Translates to: SIHMQWSMSFVNHVLRTMFWDKS*CELPLK Trigger: CTTCAGCGGGAGCTCGCACCAGGACTTATCCCAGAA...CATGGTCCTTAAGACATGATTGACAAAGCTCATGCTCCATTGCATGTGAATGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139049.2
CDS-3UTR TCA 90 bp	TGCTCAACCACTGAACTATGTGTAAGGACGCTCAGGGTTCTTACTGTAGACCTCAGTTTGTCAGCAGCATaGCAAATTGTACCGCAAGTG	+
Preference number: 4 (lower is better) Translates to: CSTTELCVRTLRVLTVDLSLSAA*QIVPQV Trigger: CACTTGCGGTACAATTTGTCATGCTGCTGACAAACT...GAGGTCTACAGTAAGAACCCTGAGCGTCCTTACACATAGTTCAGTGGTTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139049.2
CDS-3UTR TCA 90 bp	AGCATTCACATGCAATGGAGCATGAGCTTTGTCAATCATGTCTTAAGGACCATGACAAAGGAACATGGCTaGACAGGTAGGAGACAGATT	+
Preference number: 4 (lower is better) Translates to: SIHMQWSMSFVNHVLRTMTKEHG*TGRRQI Trigger: AATCTGTCTCCTACCTGTTCAGCCATGTTCCTTTGT...CATGGTCCTTAAGACATGATTGACAAAGCTCATGCTCCATTGCATGTGAATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139049.2
CDS-3UTR CAA 90 bp	CACATGCAATGGAGCATGAGCTTTGTCAATCATGTCTTAAGGACCATGTGGATTGAGACAGATTCTCCATaGTGGGTTCTCCTGATGGCT	+
Preference number: 5 (lower is better) Translates to: HMQWSMSFVNHVLRTMWIETDSP*WVLLMA Trigger: AGCCATCAGGAGAACCCACAATGGAGAATCTGTCTC...AATCCACATGGTCCTTAAGACATGATTGACAAAGCTCATGCTCCATTGCATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139049.2