Pregenerated sensors for PRPS1L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092305Ensembl transcript IDs: ENSMUST00000134550.3
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTATGTGAGGAAACCCACAATCCCCTATCTACTGAGGCCACGGTaGACCCAAATGGGTCTCTGTCAGAACATTTCACCATATACAGAA | + |
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Preference number: 1 (lower is better) Translates to: DYVRKPTIPYLLRPR*TQMGLCQNISPYTE Trigger: TTCTGTATATGGTGAAATGTTCTGACAGAGACCCATTTGGGTCCACCGTGGCCTCAGTAGATAGGGGATTGTGGGTTTCCTCACATAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR TCA 90 bp | GGGCCTTGTGAAACTTCAAAGCTCACAAAATCAAAGACGCCAGAATaGAATGACTATGTGAGGAAACCCACAATCCCCTATCTACTGAGG | + |
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Preference number: 1 (lower is better) Translates to: GPCETSKLTKSKTPE*NDYVRKPTIPYLLR Trigger: CCTCAGTAGATAGGGGATTGTGGGTTTCCTCACATAGTCATTTCATTCTGGCGTCTTTGATTTTGTGAGCTTTGAAGTTTCACAAGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR-3UTR TCA 90 bp | GAAATATATTGCAAGAGCAGAAACCCTGTGGCAATGGGGCCTTGTGAAACTTCAGACGCCAGAATGAAATaGCTATGTGAGGAAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: EIYCKSRNPVAMGPCETSDARMK*LCEETH Trigger: GTGGGTTTCCTCACATAGTCATTTCATTCTGGCGTC...TGAAGTTTCACAAGGCCCCATTGCCACAGGGTTTCTGCTCTTGCAATATATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTTGAAGTTTCCCACGGACTCTGGTGAACTTGGACCATGTCATTGTGTGTGTTCAAAGACGCCAGAATaGAATGACTATGTGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LLKFPTDSGELGPCHCVCSKTPE*NDYVRK Trigger: TTTCCTCACATAGTCATTTCATTCTGGCGTCTTTGA...ACACACACAATGACATGGTCCAAGTTCACCAGAGTCCGTGGGAAACTTCAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR-3UTR GCA 90 bp | ACTGGAAGCTGCCATTGCCTTCCAGTGCATTTAGAATACAGAAAGATGGTTAAGCTTGACGAAATATATTaGAAGAGCAGAAACCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: TGSCHCLPVHLEYRKMVKLDEIY*KSRNPV Trigger: CACAGGGTTTCTGCTCTTGCAATATATTTCGTCAAG...CTTAACCATCTTTCTGTATTCTAAATGCACTGGAAGGCAATGGCAGCTTCCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR TCA 72 bp | TACAGAAAGATGGTTAAGAAAGCCCAGGGTGCCTGTTaGAGTTTCCCACGGACTCTGGTGAACTTGGACCAT | + |
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Preference number: 3 (lower is better) Translates to: YRKMVKKAQGAC*SFPRTLVNLDH Trigger: ATGGTCCAAGTTCACCAGAGTCCGTGGGAAACTTCAACAGGCACCCTGGGCTTTCTTAACCATCTTTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR TCA 72 bp | TTGCAAGAGCAGAAACCCTGTGGCAATGGGGCCTTGTaGAACTTCAAAGCTCACAAAATCAAAGACGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LQEQKPCGNGAL*NFKAHKIKDAR Trigger: TCTGGCGTCTTTGATTTTGTGAGCTTTGAAGTTTCACAAGGCCCCATTGCCACAGGGTTTCTGCTCTTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR CCA 72 bp | CTGTGCAGACTCGTAGAGCTCAATGATGGCTTAAACTaGAAGCTGCCATTGCCTTCCAGTGCATTTAGAATA | + |
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Preference number: 3 (lower is better) Translates to: LCRLVELNDGLN*KLPLPSSAFRI Trigger: TATTCTAAATGCACTGGAAGGCAATGGCAGCTTCCAGTTTAAGCCATCATTGAGCTCTACGAGTCTGCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR CCA 72 bp | AGCTTGACGAAATATATTGCAAGAGCAGAAACCCTGTaGCAATGGGGCCTTGTGAAACTTCAAAGCTCACAA | + |
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Preference number: 3 (lower is better) Translates to: SLTKYIARAETL*QWGLVKLQSSQ Trigger: TTGTGAGCTTTGAAGTTTCACAAGGCCCCATTGCCACAGGGTTTCTGCTCTTGCAATATATTTCGTCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR TCA 72 bp | TTCAAAGCTCACAAAATCAAAGACGCCAGAATGAAATaGCTATGTGAGGAAACCCACAATCCCCTATCTACT | + |
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Preference number: 3 (lower is better) Translates to: FKAHKIKDARMK*LCEETHNPLST Trigger: AGTAGATAGGGGATTGTGGGTTTCCTCACATAGTCATTTCATTCTGGCGTCTTTGATTTTGTGAGCTTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR TCA 72 bp | GAAACTTCAAAGCTCACAAAATCAAAGACGCCAGAATaGAATGACTATGTGAGGAAACCCACAATCCCCTAT | + |
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Preference number: 3 (lower is better) Translates to: ETSKLTKSKTPE*NDYVRKPTIPY Trigger: ATAGGGGATTGTGGGTTTCCTCACATAGTCATTTCATTCTGGCGTCTTTGATTTTGTGAGCTTTGAAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR TCA 90 bp | GAAATATATTGCAAGAGCAGAAACCCTGTGGCAATGGGGCCTTGTGAAACTTCAAAGGGAAGCACGGGATaGCTGCAGTCACCCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: EIYCKSRNPVAMGPCETSKGSTG*LQSPCW Trigger: CCAGCAGGGTGACTGCAGTCATCCCGTGCTTCCCTT...TGAAGTTTCACAAGGCCCCATTGCCACAGGGTTTCTGCTCTTGCAATATATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR CCA 90 bp | GTGGCAATGGGGCCTTGTGAAACTTCAAAGCTCACAAAATCAAAGACGCCAGAACTGCAGTCACCCTGCTaGCTGAAGCGATCTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VAMGPCETSKLTKSKTPELQSPC*LKRSCR Trigger: CCTGCAAGATCGCTTCAGCCAGCAGGGTGACTGCAG...TTCTGGCGTCTTTGATTTTGTGAGCTTTGAAGTTTCACAAGGCCCCATTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR CCA 90 bp | AACCCTGTGGCAATGGGGCCTTGTGAAACTTCAAAGCTCACAAAATCAAAGACGCGAGCTTCGCAGAGATaGGAGCCCGGCTCTTATCCT | + |
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Preference number: 4 (lower is better) Translates to: NPVAMGPCETSKLTKSKTRASQR*EPGSYP Trigger: AGGATAAGAGCCGGGCTCCCATCTCTGCGAAGCTCG...CGTCTTTGATTTTGTGAGCTTTGAAGTTTCACAAGGCCCCATTGCCACAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR TCA 90 bp | GTGGCAATGGGGCCTTGTGAAACTTCAAAGCTCACAAAATCAAAGACGCCAGAAAGTCACCCTGCTGGCTaGAGCGATCTTGCAGGCATT | + |
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Preference number: 4 (lower is better) Translates to: VAMGPCETSKLTKSKTPESHPAG*SDLAGI Trigger: AATGCCTGCAAGATCGCTTCAGCCAGCAGGGTGACT...TTCTGGCGTCTTTGATTTTGTGAGCTTTGAAGTTTCACAAGGCCCCATTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR TCA 90 bp | ACGAAATATATTGCAAGAGCAGAAACCCTGTGGCAATGGGGCCTTGTGAAACTTTCTGGTAGCTCCCTCTaGGAGAAGTTTGTCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TKYIARAETLWQWGLVKLSGSSL*EKFVRR Trigger: GCGGCGGACAAACTTCTCTCAGAGGGAGCTACCAGA...AAGTTTCACAAGGCCCCATTGCCACAGGGTTTCTGCTCTTGCAATATATTTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR TCA 90 bp | AACCCTGTGGCAATGGGGCCTTGTGAAACTTCAAAGCTCACAAAATCAAAGACGCCATTAGACTGTCGTTaGTCTCACCACAACCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NPVAMGPCETSKLTKSKTPLDCR*SHHNRS Trigger: AGAGCGGTTGTGGTGAGATCAACGACAGTCTAATGG...CGTCTTTGATTTTGTGAGCTTTGAAGTTTCACAAGGCCCCATTGCCACAGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR GCA 90 bp | CGGTGGACCCAAATGGGTCTCTGTCAGAACATTTCACCATATACAGAAGCAAAGCAGCACAGCTGGCTCTaGATACAAATTGTCTACCGG | + |
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Preference number: 4 (lower is better) Translates to: RWTQMGLCQNISPYTEAKQHSWL*IQIVYR Trigger: CCGGTAGACAATTTGTATGCAGAGCCAGCTGTGCTG...CTTTGCTTCTGTATATGGTGAAATGTTCTGACAGAGACCCATTTGGGTCCACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR CCA 90 bp | CAATGGGGCCTTGTGAAACTTCAAAGCTCACAAAATCAAAGACGCCAGAATGAATTCTGGGATAAGTCCTaGTGGGAGCTTCCGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: QWGLVKLQSSQNQRRQNEFWDKS*WELPLK Trigger: CTTCAGCGGAAGCTCCCACCAGGACTTATCCCAGAA...TTCATTCTGGCGTCTTTGATTTTGTGAGCTTTGAAGTTTCACAAGGCCCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR TCA 90 bp | CAATGGGGCCTTGTGAAACTTCAAAGCTCACAAAATCAAAGACGCCAGAATGAAACAAGGGTACGTGACTaGACAGGTAGGAAACAGATT | + |
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Preference number: 4 (lower is better) Translates to: QWGLVKLQSSQNQRRQNETRVRD*TGRKQI Trigger: AATCTGTTTCCTACCTGTTCAGTCACGTACCCTTGT...TTCATTCTGGCGTCTTTGATTTTGTGAGCTTTGAAGTTTCACAAGGCCCCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR CCA 90 bp | GAAATATATTGCAAGAGCAGAAACCCTGTGGCAATGGGGCCTTGTGAAACTTCAGCGATGTCAATCACCTaGATTTTGCTACACTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: EIYCKSRNPVAMGPCETSAMSIT*ILLHCF Trigger: GAAACAGTGTAGCAAAATCCAGGTGATTGACATCGC...TGAAGTTTCACAAGGCCCCATTGCCACAGGGTTTCTGCTCTTGCAATATATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| 3UTR CAA 72 bp | GTAGAGCTCAATGATGGCTTAAACTGGAAGCTGCCATaGCCTTCCAGTGCATTTAGAATACAGAAAGATGGT | + |
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Preference number: 4 (lower is better) Translates to: VELNDGLNWKLP*PSSAFRIQKDG Trigger: ACCATCTTTCTGTATTCTAAATGCACTGGAAGGCAATGGCAGCTTCCAGTTTAAGCCATCATTGAGCTCTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR GCA 90 bp | CAATGGGGCCTTGTGAAACTTCAAAGCTCACAAAATCAAAGACGCCAGAATGAAGGTGATAATGTGATCTaGACCTGCTATAGACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: QWGLVKLQSSQNQRRQNEGDNVI*TCYRQH Trigger: ATGCTGTCTATAGCAGGTGCAGATCACATTATCACC...TTCATTCTGGCGTCTTTGATTTTGTGAGCTTTGAAGTTTCACAAGGCCCCATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR CAA 90 bp | GTGGCAATGGGGCCTTGTGAAACTTCAAAGCTCACAAAATCAAAGACGCCAGAATTCTTAGTGACCACCTaGCTGAGCTCGAGGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: VAMGPCETSKLTKSKTPEFLVTT*LSSRPR Trigger: CCTGGGCCTCGAGCTCAGCAAGGTGGTCACTAAGAA...TTCTGGCGTCTTTGATTTTGTGAGCTTTGAAGTTTCACAAGGCCCCATTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR CAA 90 bp | ACTGGAAGCTGCCATTGCCTTCCAGTGCATTTAGAATACAGAAAGATGGTTAAGATGGAAGTGACCCTCTaGGCTCCGCCAGCATCAGGA | + |
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Preference number: 5 (lower is better) Translates to: TGSCHCLPVHLEYRKMVKMEVTL*APPASG Trigger: TCCTGATGCTGGCGGAGCCAAGAGGGTCACTTCCAT...CTTAACCATCTTTCTGTATTCTAAATGCACTGGAAGGCAATGGCAGCTTCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR CAA 90 bp | ACGAAATATATTGCAAGAGCAGAAACCCTGTGGCAATGGGGCCTTGTGAAACTTTCAAAGCATGCGCCATaGATGCGAGCAATAGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: TKYIARAETLWQWGLVKLSKHAP*MRAIAG Trigger: CCCAGCTATTGCTCGCATCAATGGCGCATGCTTTGA...AAGTTTCACAAGGCCCCATTGCCACAGGGTTTCTGCTCTTGCAATATATTTCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR CAA 90 bp | GAAATATATTGCAAGAGCAGAAACCCTGTGGCAATGGGGCCTTGTGAAACTTCATCCATTAGACTGTCGTaGATCTCACCACAACCGCTC | + |
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Preference number: 5 (lower is better) Translates to: EIYCKSRNPVAMGPCETSSIRLS*ISPQPL Trigger: GAGCGGTTGTGGTGAGATCAACGACAGTCTAATGGA...TGAAGTTTCACAAGGCCCCATTGCCACAGGGTTTCTGCTCTTGCAATATATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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| CDS-3UTR CAA 90 bp | ACGAAATATATTGCAAGAGCAGAAACCCTGTGGCAATGGGGCCTTGTGAAACTTTCAATCACCTGGATTTaGCTACACTGTTTCATCTTG | + |
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Preference number: 5 (lower is better) Translates to: TKYIARAETLWQWGLVKLSITWI*LHCFIL Trigger: CAAGATGAAACAGTGTAGCAAAATCCAGGTGATTGA...AAGTTTCACAAGGCCCCATTGCCACAGGGTTTCTGCTCTTGCAATATATTTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134550.3 |
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