Pregenerated sensors for PRPH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023978Ensembl transcript IDs: ENSMUST00000024773.6
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACAGCACAGGCCAGCAGCAGCTGAGCCCTTGGGGACCAAGCCCTaGCTCCTGGTGGTCTCAGATGGCCACAACAGTCCTTGTGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: TQHRPAAAEPLGTKP*LLVVSDGHNSPCGC Trigger: GCACCCACAAGGACTGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCTTGGTCCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 90 bp | GGCCAGCAGCAGCTGAGCCCTTGGGGACCAAGCCCTGCCTCCTGGTaGTCTCAGATGGCCACAACAGTCCTTGTGGGTGCCATCCCACAA | + |
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Preference number: 1 (lower is better) Translates to: GQQQLSPWGPSPASW*SQMATTVLVGAIPQ Trigger: TTGTGGGATGGCACCCACAAGGACTGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCTTGGTCCCCAAGGGCTCAGCTGCTGCTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 90 bp | ACAGGCCAGCAGCAGCTGAGCCCTTGGGGACCAAGCCCTGCCTCCTaGTGGTCTCAGATGGCCACAACAGTCCTTGTGGGTGCCATCCCA | + |
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Preference number: 1 (lower is better) Translates to: TGQQQLSPWGPSPAS*WSQMATTVLVGAIP Trigger: TGGGATGGCACCCACAAGGACTGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCTTGGTCCCCAAGGGCTCAGCTGCTGCTGGCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 90 bp | AGGGGTCTTTGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTTGTaGCCATCTGAGACCACCAGGAGGCAGGGCTTGGTCCCCAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: RGLCPPGQCSPQRLL*PSETTRRQGLVPKW Trigger: CCACTTGGGGACCAAGCCCTGCCTCCTGGTGGTCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGACCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 90 bp | AGAGAGTTAGAACCACACAGCACAGGCCAGCAGCAGCTGAGCCCTTaGGGACCAAGCCCTGCCTCCTGGTGGTCTCAGATGGCCACAACA | + |
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Preference number: 1 (lower is better) Translates to: RELEPHSTGQQQLSP*GPSPASWWSQMATT Trigger: TGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCTTGGTCCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGTGGTTCTAACTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 90 bp | CTGAGAGGTGACGGCAGGACCCCGAGGGTCCCCGCCACAGATGCCTaGCTCAGCATCTGGGCCATTTCTTGCTCTGAGAGACTCAGAATA | + |
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Preference number: 1 (lower is better) Translates to: LRGDGRTPRVPATDA*LSIWAISCSERLRI Trigger: TATTCTGAGTCTCTCAGAGCAAGAAATGGCCCAGATGCTGAGCCAGGCATCTGTGGCGGGGACCCTCGGGGTCCTGCCGTCACCTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR TCA 90 bp | ACACTACTGAGGAGGGGAGAGGCCCTTGGTGTGGCCAGTCACCTATaGGAGATCTGGACTCACACTTGGACAGAGCCCTGGACTGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: TLLRRGEALGVASHL*EIWTHTWTEPWTGQ Trigger: CTGGCCAGTCCAGGGCTCTGTCCAAGTGTGAGTCCAGATCTCTCATAGGTGACTGGCCACACCAAGGGCCTCTCCCCTCCTCAGTAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR GCA 90 bp | GGAGGGAGAACAGAAGCTCCCAGGGGTCTTTGCCCTCCTGGACAGTaGAGTCCACAAAGACTGTTGTGGCCATCTGAGACCACCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GGRTEAPRGLCPPGQ*SPQRLLWPSETTRR Trigger: CCTCCTGGTGGTCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCTGTTCTCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR TCA 90 bp | ACCACCAGGAGGCAGGGCTTGGTCCCCAAGTGGCAGATTCCTAATTaGTCACCACATCTCTCCCACAAAGGACAGCAAACTCACCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: TTRRQGLVPKWQIPN*SPHLSHKGQQTHPG Trigger: CCCCGGGTGAGTTTGCTGTCCTTTGTGGGAGAGATGTGGTGATCAATTAGGAATCTGCCACTTGGGGACCAAGCCCTGCCTCCTGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 90 bp | TCTCCAGAATCTTCCTGGATACGGAAGCATTCCCATAGTGCTTTGTaGGAGGGAGAACAGAAGCTCCCAGGGGTCTTTGCCCTCCTGGAC | + |
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Preference number: 1 (lower is better) Translates to: SPESSWIRKHSHSAL*EGEQKLPGVFALLD Trigger: GTCCAGGAGGGCAAAGACCCCTGGGAGCTTCTGTTCTCCCTCCCACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR GCA 90 bp | AGGGTCCCCGCCACAGATGCCTGGCTCAGCATCTGGGCCATTTCTTaGTCTGAGAGACTCAGAATACTAACCAACATTGGGGCCATAGTT | + |
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Preference number: 1 (lower is better) Translates to: RVPATDAWLSIWAIS*SERLRILTNIGAIV Trigger: AACTATGGCCCCAATGTTGGTTAGTATTCTGAGTCTCTCAGAGCAAGAAATGGCCCAGATGCTGAGCCAGGCATCTGTGGCGGGGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 90 bp | TGTAGCTTAAAAGAGGCAGACACTACTGAGGAGGGGAGAGGCCCTTaGTGTGGCCAGTCACCTATGAGAGATCTGGACTCACACTTGGAC | + |
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Preference number: 1 (lower is better) Translates to: CSLKEADTTEEGRGP*CGQSPMRDLDSHLD Trigger: GTCCAAGTGTGAGTCCAGATCTCTCATAGGTGACTGGCCACACCAAGGGCCTCTCCCCTCCTCAGTAGTGTCTGCCTCTTTTAAGCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 90 bp | CCACATCAAGGAGAGTCAGTAGGTGACCAGCTTTCTCGGGAAATTTaGACTTTCAGCTGGACAAAGGGGGTATCCACAGTCCCTGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: PHQGESVGDQLSREI*TFSWTKGVSTVPGV Trigger: GACTCCAGGGACTGTGGATACCCCCTTTGTCCAGCTGAAAGTCCAAATTTCCCGAGAAAGCTGGTCACCTACTGACTCTCCTTGATGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 90 bp | CCACACACGCTAGCTCGGAAAGATAACCTATCTCCAGAATCTTCCTaGATACGGAAGCATTCCCATAGTGCTTTGTGGGAGGGAGAACAG | + |
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Preference number: 1 (lower is better) Translates to: PHTLARKDNLSPESS*IRKHSHSALWEGEQ Trigger: CTGTTCTCCCTCCCACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAGGTTATCTTTCCGAGCTAGCGTGTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR TCA 90 bp | ACACAGCACAGGCCAGCAGCAGCTGAGCCCTTGGGGACCAAGCCCTGCCTCCTGGAGTCCACTAAGTGTTaGGGAGGGGGAGAGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: TQHRPAAAEPLGTKPCLLESTKC*GGGEAP Trigger: TGGGGCCTCTCCCCCTCCTCAACACTTAGTGGACTC...CAGGAGGCAGGGCTTGGTCCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CAA 90 bp | CCCAGGGGTCTTTGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTaGTGGCCATCTGAGACCACCAGGAGGCAGGGCTTGGTCCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: PRGLCPPGQCSPQRL*WPSETTRRQGLVPK Trigger: CTTGGGGACCAAGCCCTGCCTCCTGGTGGTCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGAGAGTTAGAACCACACAGCACAGGCCAGCAGCAGCTGAGCCCTTGGGGAGCCCTGCCTCCTGGTaGTCTCAGATGGCCACAACA | + |
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Preference number: 2 (lower is better) Translates to: PERVRTTQHRPAAAEPLGSPASW*SQMATT Trigger: TGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCT...CCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGTGGTTCTAACTCTCTCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGAGAGTTAGAACCACACAGCACAGGCCAGCAGCAGCTGAGCCCTTGGGGGTGAGCGTTCAGTCCTaGCCATCTGCTGCATCGTTC | + |
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Preference number: 2 (lower is better) Translates to: PERVRTTQHRPAAAEPLGVSVQS*PSAASF Trigger: GAACGATGCAGCAGATGGCCAGGACTGAACGCTCAC...CCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGTGGTTCTAACTCTCTCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGAGAGTTAGAACCACACAGCACAGGCCAGCAGCAGCTGAGCCCTTGGGGGTGAGTGGAGGATGCTaGGACATGCCAGCTGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: PERVRTTQHRPAAAEPLGVSGGC*DMPAEV Trigger: TACTTCAGCTGGCATGTCCCAGCATCCTCCACTCAC...CCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGTGGTTCTAACTCTCTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR TCA 90 bp | GACAGTGCAGTCCACAAAGACTGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGTGGCCAGTCACCTATaGGAGATCTGGACTCACACT | + |
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Preference number: 2 (lower is better) Translates to: DSAVHKDCCGHLRPPGGRVASHL*EIWTHT Trigger: AGTGTGAGTCCAGATCTCTCATAGGTGACTGGCCAC...CCTGCCTCCTGGTGGTCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTAGAACCACACAGCACAGGCCAGCAGCAGCTGAGCCCTTGGGGACCAAGGGTATCCACAGTCCCTaGAGTCCACTAAGTGTTGAG | + |
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Preference number: 2 (lower is better) Translates to: RVRTTQHRPAAAEPLGTKGIHSP*SPLSVE Trigger: CTCAACACTTAGTGGACTCCAGGGACTGTGGATACC...CTTGGTCCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGTGGTTCTAACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | GAGGGAGAACAGAAGCTCCCAGGGGTCTTTGCCCTCCTGGACAGTGCAGTCCACTCAGTCACTCACATCTaGAGGCAGCCGTTTCACAAA | + |
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Preference number: 2 (lower is better) Translates to: EGEQKLPGVFALLDSAVHSVTHI*RQPFHK Trigger: TTTGTGAAACGGCTGCCTCCAGATGTGAGTGACTGA...GTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCTGTTCTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CAA 90 bp | GACCAAGCCCTGCCTCCTGGTGGTCTCAGATGGCCACAACAGTCCTaGTGGGTGCCATCCCACAAGGTGCCACCAAAATCATATTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: DQALPPGGLRWPQQS*WVPSHKVPPKSYFC Trigger: GCAAAAATATGATTTTGGTGGCACCTTGTGGGATGGCACCCACAAGGACTGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCTTGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTAGAACCACACAGCACAGGCCAGCAGCAGCTGAGCCCTTGGGGACCAAGTGGCAGATTCCTAATTaGTCACCACATCTCTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RVRTTQHRPAAAEPLGTKWQIPN*SPHLSH Trigger: GTGGGAGAGATGTGGTGATCAATTAGGAATCTGCCA...CTTGGTCCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGTGGTTCTAACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR GCA 90 bp | AGAAGCTCCCAGGGGTCTTTGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTTTCAGTCCTGGCCATCTaGTGCATCGTTCAGTCACTC | + |
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Preference number: 2 (lower is better) Translates to: RSSQGSLPSWTVQSTKTVSVLAI*CIVQSL Trigger: GAGTGACTGAACGATGCAGCAGATGGCCAGGACTGA...AACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTTGTGGCCATCTGAGAATCTGGACTCACACTTaGACAGAGCCCTGGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: VFALLDSAVHKDCCGHLRIWTHT*TEPWTG Trigger: GCCAGTCCAGGGCTCTGTCCAAGTGTGAGTCCAGAT...TCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CAA 90 bp | CTATCTCCAGAATCTTCCTGGATACGGAAGCATTCCCATAGTGCTTaGTGGGAGGGAGAACAGAAGCTCCCAGGGGTCTTTGCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LSPESSWIRKHSHSA*WEGEQKLPGVFALL Trigger: CAGGAGGGCAAAGACCCCTGGGAGCTTCTGTTCTCCCTCCCACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | AATCTTCCTGGATACGGAAGCATTCCCATAGTGCTTTGTGGGAGGGAGAACAGAGGCCTTCTCAGGCAGTaGCTCACCCAGCACTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: NLPGYGSIPIVLCGRENRGLLRQ*LTQHLV Trigger: CACCAAGTGCTGGGTGAGCCACTGCCTGAGAAGGCC...TCTGTTCTCCCTCCCACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTGCCATCTGTGAATTTCTATGTGGAGGTAACCTTCTGAGGGAGTCCAATAGAGGCAGACACTACTaGGGAGGGGAGAGGCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SCAICEFLCGGNLLRESNRGRHY*GGERPL Trigger: CAAGGGCCTCTCCCCTCCTCAGTAGTGTCTGCCTCT...ATTGGACTCCCTCAGAAGGTTACCTCCACATAGAAATTCACAGATGGCACAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCTCCCAGGGGTCTTTGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTTGGAATGGGGCAGGTATaGGACACTCACTGGATTTTA | + |
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Preference number: 2 (lower is better) Translates to: RSSQGSLPSWTVQSTKTVGMGQV*DTHWIL Trigger: TAAAATCCAGTGAGTGTCCCATACCTGCCCCATTCC...AACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR TCA 90 bp | CGGAAAGATAACCTATCTCCAGAATCTTCCTGGATACGGAAGCATTCCCATAGTACTGTTGTGGCCATCTaGGACCACCAGGAGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RKDNLSPESSWIRKHSHSTVVAI*DHQEAG Trigger: CCCTGCCTCCTGGTGGTCTCAGATGGCCACAACAGT...ACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAGGTTATCTTTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTGCCATCTGTGAATTTCTATGTGGAGGTAACCTTCTGAGGGAGTCCAATACTTGGACAGAGCCCTaGACTGGCCAGTCCTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SCAICEFLCGGNLLRESNTWTEP*TGQSCE Trigger: CTCACAGGACTGGCCAGTCCAGGGCTCTGTCCAAGT...ATTGGACTCCCTCAGAAGGTTACCTCCACATAGAAATTCACAGATGGCACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | CACAACAGTCCTTGTGGGTGCCATCCCACAAGGTGCCACCAAAATCATATTTTTCTGCGAGTCTGGGAATaGGGCAGGTATGGGACACTC | + |
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Preference number: 2 (lower is better) Translates to: HNSPCGCHPTRCHQNHIFLRVWE*GRYGTL Trigger: GAGTGTCCCATACCTGCCCCATTCCCAGACTCGCAG...AAAAATATGATTTTGGTGGCACCTTGTGGGATGGCACCCACAAGGACTGTTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR TCA 90 bp | ATAACCTATCTCCAGAATCTTCCTGGATACGGAAGCATTCCCATAGTGCTTTGTGACTGGCCAGTCCTGTaGGCGTTCAGTCCTGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: ITYLQNLPGYGSIPIVLCDWPVL*AFSPGH Trigger: ATGGCCAGGACTGAACGCTCACAGGACTGGCCAGTC...ACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAGGTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCTCCCAGGGGTCTTTGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTTGTTTCAAGTGATGGTTaGGATGCAGAACTTGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: RSSQGSLPSWTVQSTKTVVSSDG*DAELVA Trigger: AGCTACAAGTTCTGCATCCCAACCATCACTTGAAAC...AACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR GCA 72 bp | AGGCCAGCAGCAGCTGAGCCCTTGGGGACCAAGCCCTaGCTCCTGGTGGTCTCAGATGGCCACAACAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: RPAAAEPLGTKP*LLVVSDGHNSP Trigger: AGGACTGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCTTGGTCCCCAAGGGCTCAGCTGCTGCTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 72 bp | CAGCAGCTGAGCCCTTGGGGACCAAGCCCTGCCTCCTaGTGGTCTCAGATGGCCACAACAGTCCTTGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: QQLSPWGPSPAS*WSQMATTVLVG Trigger: ACCCACAAGGACTGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCTTGGTCCCCAAGGGCTCAGCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR TCA 72 bp | AGTATCTTTCACCATAGTCTCAGCCCTCCTGAGAGGTaGCGGCAGGACCCCGAGGGTCCCCGCCACAGATGC | + |
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Preference number: 3 (lower is better) Translates to: SIFHHSLSPPER*RQDPEGPRHRC Trigger: GCATCTGTGGCGGGGACCCTCGGGGTCCTGCCGTCACCTCTCAGGAGGGCTGAGACTATGGTGAAAGATACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CAA 90 bp | GAGGGAGAACAGAAGCTCCCAGGGGTCTTTGCCCTCCTGGACAGTGCAGTCCACGATCTGGACTCACACTaGGACAGAGCCCTGGACTGG | + |
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Preference number: 3 (lower is better) Translates to: EGEQKLPGVFALLDSAVHDLDSH*DRALDW Trigger: CCAGTCCAGGGCTCTGTCCAAGTGTGAGTCCAGATC...GTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCTGTTCTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR TCA 72 bp | AGGAGGGGAGAGGCCCTTGGTGTGGCCAGTCACCTATaGGAGATCTGGACTCACACTTGGACAGAGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RRGEALGVASHL*EIWTHTWTEPW Trigger: CCAGGGCTCTGTCCAAGTGTGAGTCCAGATCTCTCATAGGTGACTGGCCACACCAAGGGCCTCTCCCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR GCA 72 bp | AGGCAGTGGCTCACCCAGCACTTGGTGAGTGGAGGATaGTGGGACATGCCAGCTGAAGTACGTGACTGCGAG | + |
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Preference number: 3 (lower is better) Translates to: RQWLTQHLVSGG*WDMPAEVRDCE Trigger: CTCGCAGTCACGTACTTCAGCTGGCATGTCCCAGCATCCTCCACTCACCAAGTGCTGGGTGAGCCACTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 72 bp | TGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTTGTaGCCATCTGAGACCACCAGGAGGCAGGGCTTGGTC | + |
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Preference number: 3 (lower is better) Translates to: CPPGQCSPQRLL*PSETTRRQGLV Trigger: GACCAAGCCCTGCCTCCTGGTGGTCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR TCA 72 bp | TCACACTTGGACAGAGCCCTGGACTGGCCAGTCCTGTaGGCGTTCAGTCCTGGCCATCTGCTGCATCGTTCA | + |
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Preference number: 3 (lower is better) Translates to: SHLDRALDWPVL*AFSPGHLLHRS Trigger: TGAACGATGCAGCAGATGGCCAGGACTGAACGCTCACAGGACTGGCCAGTCCAGGGCTCTGTCCAAGTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR GCA 72 bp | GGAGGATGCTGGGACATGCCAGCTGAAGTACGTGACTaGGAGTCTGGGAATGGGGCAGGTATGGGACACTCA | + |
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Preference number: 3 (lower is better) Translates to: GGCWDMPAEVRD*ESGNGAGMGHS Trigger: TGAGTGTCCCATACCTGCCCCATTCCCAGACTCGCAGTCACGTACTTCAGCTGGCATGTCCCAGCATCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 72 bp | GACTTTCAGCTGGACAAAGGGGGTATCCACAGTCCCTaGAGTCCACTAAGTGTTGAGGAGGGGGAGAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: DFQLDKGGIHSP*SPLSVEEGERP Trigger: GGGCCTCTCCCCCTCCTCAACACTTAGTGGACTCCAGGGACTGTGGATACCCCCTTTGTCCAGCTGAAAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR CCA 72 bp | CAGTGGCTCACCCAGCACTTGGTGAGTGGAGGATGCTaGGACATGCCAGCTGAAGTACGTGACTGCGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: QWLTQHLVSGGC*DMPAEVRDCES Trigger: AGACTCGCAGTCACGTACTTCAGCTGGCATGTCCCAGCATCCTCCACTCACCAAGTGCTGGGTGAGCCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CAA 90 bp | GTCTTTGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTTGTGGCCATCTGAGAACCAGGAGGCAGGGCTaGGTCCCCAAGTGGCAGATT | + |
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Preference number: 3 (lower is better) Translates to: VFALLDSAVHKDCCGHLRTRRQG*VPKWQI Trigger: AATCTGCCACTTGGGGACCAAGCCCTGCCTCCTGGT...TCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| 3UTR-3UTR CAA 90 bp | CCTGAGAGAGTTAGAACCACACAGCACAGGCCAGCAGCAGCTGAGCCCTTGGGGCATTCCCATAGTGCTTaGTGGGAGGGAGAACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PERVRTTQHRPAAAEPLGHSHSA*WEGEQK Trigger: CTTCTGTTCTCCCTCCCACAAAGCACTATGGGAATG...CCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGTGGTTCTAACTCTCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR GCA 72 bp | ACAGAAGCTCCCAGGGGTCTTTGCCCTCCTGGACAGTaGAGTCCACAAAGACTGTTGTGGCCATCTGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: TEAPRGLCPPGQ*SPQRLLWPSET Trigger: GGTCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CCA 72 bp | AGGGAGAACAGAAGCTCCCAGGGGTCTTTGCCCTCCTaGACAGTGCAGTCCACAAAGACTGTTGTGGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: RENRSSQGSLPS*TVQSTKTVVAI Trigger: GATGGCCACAACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCTGTTCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CCA 72 bp | AAAGAGGCAGACACTACTGAGGAGGGGAGAGGCCCTTaGTGTGGCCAGTCACCTATGAGAGATCTGGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: KEADTTEEGRGP*CGQSPMRDLDS Trigger: TGAGTCCAGATCTCTCATAGGTGACTGGCCACACCAAGGGCCTCTCCCCTCCTCAGTAGTGTCTGCCTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CCA 72 bp | TGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCTTaGTCCCCAAGTGGCAGATTCCTAATTGATCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: CCGHLRPPGGRA*SPSGRFLIDHH Trigger: GTGGTGATCAATTAGGAATCTGCCACTTGGGGACCAAGCCCTGCCTCCTGGTGGTCTCAGATGGCCACAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CCA 72 bp | TCTTCCTGGATACGGAAGCATTCCCATAGTGCTTTGTaGGAGGGAGAACAGAAGCTCCCAGGGGTCTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSWIRKHSHSAL*EGEQKLPGVFA Trigger: GGCAAAGACCCCTGGGAGCTTCTGTTCTCCCTCCCACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR TCA 72 bp | AGGCAGGGCTTGGTCCCCAAGTGGCAGATTCCTAATTaGTCACCACATCTCTCCCACAAAGGACAGCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: RQGLVPKWQIPN*SPHLSHKGQQT Trigger: AGTTTGCTGTCCTTTGTGGGAGAGATGTGGTGATCAATTAGGAATCTGCCACTTGGGGACCAAGCCCTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR GCA 72 bp | GCCACAGATGCCTGGCTCAGCATCTGGGCCATTTCTTaGTCTGAGAGACTCAGAATACTAACCAACATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ATDAWLSIWAIS*SERLRILTNIG Trigger: CCCAATGTTGGTTAGTATTCTGAGTCTCTCAGAGCAAGAAATGGCCCAGATGCTGAGCCAGGCATCTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CCA 72 bp | GGAGAGTCAGTAGGTGACCAGCTTTCTCGGGAAATTTaGACTTTCAGCTGGACAAAGGGGGTATCCACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GESVGDQLSREI*TFSWTKGVSTV Trigger: GACTGTGGATACCCCCTTTGTCCAGCTGAAAGTCCAAATTTCCCGAGAAAGCTGGTCACCTACTGACTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTTGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTTGTGGCCATCTGAGAGCTTTCTCGGGAAATTaGGACTTTCAGCTGGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VFALLDSAVHKDCCGHLRAFSGN*DFQLDK Trigger: TTTGTCCAGCTGAAAGTCCAAATTTCCCGAGAAAGC...TCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR GCA 72 bp | CATCTGGAGGCAGCCGTTTCACAAATGTTTGTAACCTaGCCTAAGGACCCTGAACTTCAAGGCCCACATCAA | + |
|
Preference number: 3 (lower is better) Translates to: HLEAAVSQMFVT*PKDPELQGPHQ Trigger: TTGATGTGGGCCTTGAAGTTCAGGGTCCTTAGGGCAGGTTACAAACATTTGTGAAACGGCTGCCTCCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR GCA 72 bp | CTGGTGGTCTCAGATGGCCACAACAGTCCTTGTGGGTaGCATCCCACAAGGTGCCACCAAAATCATATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LVVSDGHNSPCG*HPTRCHQNHIF Trigger: AAAAATATGATTTTGGTGGCACCTTGTGGGATGGCACCCACAAGGACTGTTGTGGCCATCTGAGACCACCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CCA 72 bp | CTAGCTCGGAAAGATAACCTATCTCCAGAATCTTCCTaGATACGGAAGCATTCCCATAGTGCTTTGTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LARKDNLSPESS*IRKHSHSALWE Trigger: CTCCCACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAGGTTATCTTTCCGAGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CCA 72 bp | AAGTACGTGACTGCGAGTCTGGGAATGGGGCAGGTATaGGACACTCACTGGATTTTACTAAAGGAAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KYVTASLGMGQV*DTHWILLKESF Trigger: AAAACTTTCCTTTAGTAAAATCCAGTGAGTGTCCCATACCTGCCCCATTCCCAGACTCGCAGTCACGTACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR-3UTR CAA 90 bp | CGGAAAGATAACCTATCTCCAGAATCTTCCTGGATACGGAAGCATTCCCATAGTATTGCTTCTCCCCCATaGTGTAACATGAAGCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: RKDNLSPESSWIRKHSHSIASPP*CNMKQM Trigger: CATTTGCTTCATGTTACACAATGGGGGAGAAGCAAT...ACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAGGTTATCTTTCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CAA 72 bp | ACCCGGGGCCTTCTCAGGCAGTGGCTCACCCAGCACTaGGTGAGTGGAGGATGCTGGGACATGCCAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRGLLRQWLTQH*VSGGCWDMPAE Trigger: TTCAGCTGGCATGTCCCAGCATCCTCCACTCACCAAGTGCTGGGTGAGCCACTGCCTGAGAAGGCCCCGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR TCA 90 bp | ACAGAGCCCTGGACTGGCCAGTCCTGTGAGCGTTCAGTCCTGGCCATCTGCTGCGCGCCGAGTTGTTGGTaGGCTGGTACTGGATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEPWTGQSCERSVLAICCAPSCW*AGTGYR Trigger: CCTGTATCCAGTACCAGCTCACCAACAACTCGGCGC...GCAGCAGATGGCCAGGACTGAACGCTCACAGGACTGGCCAGTCCAGGGCTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR TCA 90 bp | GACAAAGGGGGTATCCACAGTCCCTGGAGTCCACTAAGTGTTGAGGAGGGGGAGGCCCCTGGGCCAACTTaGCCCGCTTCTTCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DKGGIHSPWSPLSVEEGEAPGPT*PASSGQ Trigger: TTGACCAGAAGAAGCGGGTCAAGTTGGCCCAGGGGC...CTCCCCCTCCTCAACACTTAGTGGACTCCAGGGACTGTGGATACCCCCTTTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGAGGGGAGAGGCCCTTGGTGTGGCCAGTCACCTATGAGAGATCTGGACATAAGCCAGAGCCCCTaGGCCAACTTGACCCGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TEEGRGPWCGQSPMRDLDISQSP*ANLTRF Trigger: GAAGCGGGTCAAGTTGGCCCAGGGGCTCTGGCTTAT...GTCCAGATCTCTCATAGGTGACTGGCCACACCAAGGGCCTCTCCCCTCCTCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR TCA 90 bp | AAGCCCTGCCTCCTGGTGGTCTCAGATGGCCACAACAGTCCTTGTGGGTGCCATCGATTGCTGATCCACTaGATCTCGAACCAGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPCLLVVSDGHNSPCGCHRLLIH*ISNQSR Trigger: CCGGGACTGGTTCGAGATTCAGTGGATCAGCAATCG...ATGGCACCCACAAGGACTGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR TCA 90 bp | GACAGTGCAGTCCACAAAGACTGTTGTGGCCATCTGAGACCACCAGGAGGCAGGCCTTCAGCCTCCACCTaGTTGCTCTTGCCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSAVHKDCCGHLRPPGGRPSAST*LLLPSF Trigger: GAAGCTGGGCAAGAGCAATCAGGTGGAGGCTGAAGG...CCTGCCTCCTGGTGGTCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CAA 72 bp | CTTTGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTaGTGGCCATCTGAGACCACCAGGAGGCAGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LCPPGQCSPQRL*WPSETTRRQGL Trigger: CAAGCCCTGCCTCCTGGTGGTCTCAGATGGCCACAACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR TCA 90 bp | ACTGAGGAGGGGAGAGGCCCTTGGTGTGGCCAGTCACCTATGAGAGATCTGGACCCAGGTAGCGATTGCTaGTCCACTGAATCTCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TEEGRGPWCGQSPMRDLDPGSDC*STESRT Trigger: GGTTCGAGATTCAGTGGATCAGCAATCGCTACCTGG...GTCCAGATCTCTCATAGGTGACTGGCCACACCAAGGGCCTCTCCCCTCCTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTCCCAGGGGTCTTTGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTTTCCACTTGGCGTACTTaGCCGGGTCCAGGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSSQGSLPSWTVQSTKTVSTWRT*PGPGHH Trigger: ATGATGCCCTGGACCCGGCCAAGTACGCCAAGTGGA...AACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CCA 90 bp | GACAAAGGGGGTATCCACAGTCCCTGGAGTCCACTAAGTGTTGAGGAGGGGGAGGAGTTGTTGGTGAGCTaGTACTGGATACAGGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DKGGIHSPWSPLSVEEGEELLVS*YWIQGR Trigger: GCGGCCCTGTATCCAGTACCAGCTCACCAACAACTC...CTCCCCCTCCTCAACACTTAGTGGACTCCAGGGACTGTGGATACCCCCTTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR TCA 90 bp | CTCACACTTGGACAGAGCCCTGGACTGGCCAGTCCTGTGAGCGTTCAGTCCTGGTGTTCCCACAGCACTTaGACTCAATCTGGAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGQSPGLASPVSVQSWCSHST*TQSGAC Trigger: ACATGCTCCAGATTGAGTTCAAGTGCTGTGGGAACA...CCAGGACTGAACGCTCACAGGACTGGCCAGTCCAGGGCTCTGTCCAAGTGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CAA 72 bp | CTTTGTGGGAGGGAGAACAGAAGCTCCCAGGGGTCTTaGCCCTCCTGGACAGTGCAGTCCACAAAGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCGRENRSSQGS*PSWTVQSTKTV Trigger: AACAGTCTTTGTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCTGTTCTCCCTCCCACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR TCA 90 bp | AAGCCCTGCCTCCTGGTGGTCTCAGATGGCCACAACAGTCCTTGTGGGTGCCATCGCCCATGGAATTCATaGGGCTGCTGTAGTAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPCLLVVSDGHNSPCGCHRPWNS*GCCSNS Trigger: TGAATTACTACAGCAGCCTCATGAATTCCATGGGCG...ATGGCACCCACAAGGACTGTTGTGGCCATCTGAGACCACCAGGAGGCAGGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR GCA 90 bp | CACAACAGTCCTTGTGGGTGCCATCCCACAAGGTGCCACCAAAATCATATTTTTAGCCGGGCCTGCGTCTaGACCTTCAGCCTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: HNSPCGCHPTRCHQNHIFSRACV*TFSLHL Trigger: CAGGTGGAGGCTGAAGGTGCAGACGCAGGCCCGGCT...AAAAATATGATTTTGGTGGCACCTTGTGGGATGGCACCCACAAGGACTGTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR GCA 90 bp | CACAACAGTCCTTGTGGGTGCCATCCCACAAGGTGCCACCAAAATCATATTTTTCTCTGGAGCCGGGCCTaGGTCTGCACCTTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HNSPCGCHPTRCHQNHIFLWSRA*VCTFSL Trigger: GAGGCTGAAGGTGCAGACGCAGGCCCGGCTCCAGAG...AAAAATATGATTTTGGTGGCACCTTGTGGGATGGCACCCACAAGGACTGTTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR GCA 90 bp | ATAACCTATCTCCAGAATCTTCCTGGATACGGAAGCATTCCCATAGTGCTTTGTTCAGCAGAGCGGCCCTaGAGCCCCGCAGCCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ITYLQNLPGYGSIPIVLCSAERP*SPAARG Trigger: ACCTCTGGCTGCGGGGCTGCAGGGCCGCTCTGCTGA...ACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAGGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGAACAGAAGCTCCCAGGGGTCTTTGCCCTCCTGGACAGTGCAGTCCACGAGTTGGGCACAAAGTaGCTCTCAGAATTATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EGEQKLPGVFALLDSAVHELGTK*LSELFI Trigger: GATGAATAATTCTGAGAGCCACTTTGTGCCCAACTC...GTGGACTGCACTGTCCAGGAGGGCAAAGACCCCTGGGAGCTTCTGTTCTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CCA 90 bp | CACAACAGTCCTTGTGGGTGCCATCCCACAAGGTGCCACCAAAATCATATTTTTGCCAGGGCTTCCACTTaGCGTACTTGGCCGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HNSPCGCHPTRCHQNHIFARAST*RTWPGP Trigger: TGGACCCGGCCAAGTACGCCAAGTGGAAGCCCTGGC...AAAAATATGATTTTGGTGGCACCTTGTGGGATGGCACCCACAAGGACTGTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CCA 90 bp | CTCACACTTGGACAGAGCCCTGGACTGGCCAGTCCTGTGAGCGTTCAGTCCTGGCACTTGAACTCAATCTaGAGCATGTCGATGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGQSPGLASPVSVQSWHLNSI*SMSMVF Trigger: AAAGACCATCGACATGCTCCAGATTGAGTTCAAGTG...CCAGGACTGAACGCTCACAGGACTGGCCAGTCCAGGGCTCTGTCCAAGTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR GCA 90 bp | CTTCTCAGGCAGTGGCTCACCCAGCACTTGGTGAGTGGAGGATGCTGGGACATGTCACTTCGCTCCTCTTaGGAAGTTCAATCTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLRQWLTQHLVSGGCWDMSLRSS*EVQSSR Trigger: TCTTGAAGATTGAACTTCGCAAGAGGAGCGAAGTGA...CATGTCCCAGCATCCTCCACTCACCAAGTGCTGGGTGAGCCACTGCCTGAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR TCA 90 bp | ATAACCTATCTCCAGAATCTTCCTGGATACGGAAGCATTCCCATAGTGCTTTGTTGGGGTTGCAGCAGCTaGAAGGGACGCCGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ITYLQNLPGYGSIPIVLCWGCSS*KGRRPP Trigger: TGGTGGACGGCGTCCCTTTCAGCTGCTGCAACCCCA...ACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAGGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CAA 72 bp | GAATCTTCCTGGATACGGAAGCATTCCCATAGTGCTTaGTGGGAGGGAGAACAGAAGCTCCCAGGGGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESSWIRKHSHSA*WEGEQKLPGVF Trigger: AAAGACCCCTGGGAGCTTCTGTTCTCCCTCCCACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR TCA 90 bp | ATAACCTATCTCCAGAATCTTCCTGGATACGGAAGCATTCCCATAGTGCTTTGTAGAACAGCCCCAAGCTaGAGAGGACGATGCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITYLQNLPGYGSIPIVLCRTAPS*RGRCRP Trigger: TGGCCGGCATCGTCCTCTTCAGCTTGGGGCTGTTCT...ACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAGGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| 3UTR CAA 72 bp | ACTCAGAATACTAACCAACATTGGGGCCATAGTTCGTaGGGTGTGCCAGCATCTCTAATCTGGTCTTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQNTNQHWGHSS*GVPASLIWSSP Trigger: GGGGGAAGACCAGATTAGAGATGCTGGCACACCCAACGAACTATGGCCCCAATGTTGGTTAGTATTCTGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR TCA 90 bp | ATAACCTATCTCCAGAATCTTCCTGGATACGGAAGCATTCCCATAGTGCTTTGTTCCCAGCCAGAGAGTTaGAGACACAGGACAGGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ITYLQNLPGYGSIPIVLCSQPES*RHRTGP Trigger: GGGTCCTGTCCTGTGTCTTCAACTCTCTGGCTGGGA...ACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAGGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CCA 90 bp | ATAACCTATCTCCAGAATCTTCCTGGATACGGAAGCATTCCCATAGTGCTTTGTTTGACCCGCTTCTTCTaGTCAAACTTGACTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITYLQNLPGYGSIPIVLCLTRFF*SNLTLS Trigger: GCTCAAAGTCAAGTTTGACCAGAAGAAGCGGGTCAA...ACAAAGCACTATGGGAATGCTTCCGTATCCAGGAAGATTCTGGAGATAGGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CCA 90 bp | TTATTTTCACCTTGCTTTTATGTTTCAAGTGATGGTTGGGATGCAGAACTTGTACCCCTATCAGGGAGTTaGGCACAAAGTGGCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFSPCFYVSSDGWDAELVPLSGS*AQSGSQ Trigger: CTGAGAGCCACTTTGTGCCCAACTCCCTGATAGGGG...TACAAGTTCTGCATCCCAACCATCACTTGAAACATAAAAGCAAGGTGAAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CAA 90 bp | ACACAGCACAGGCCAGCAGCAGCTGAGCCCTTGGGGACCAAGCCCTGCCTCCTGAGCCAGGGCTTCCACTaGGCGTACTTGGCCGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQHRPAAAEPLGTKPCLLSQGFH*AYLAGS Trigger: GGACCCGGCCAAGTACGCCAAGTGGAAGCCCTGGCT...CAGGAGGCAGGGCTTGGTCCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS TCA 90 bp | GCTGGTACTGGATACAGGGCCGCGGGGAGCTGGGGTTGCAGCAGCTaGAAGGGACGCCGTCCACCAGGTACCGCCCATCCACGTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AGTGYRAAGSWGCSS*KGRRPPGTAHPRCS Trigger: AGAGCAACGTGGATGGGCGGTACCTGGTGGACGGCGTCCCTTTCAGCTGCTGCAACCCCAGCTCCCCGCGGCCCTGTATCCAGTACCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CAA 90 bp | CTTCTCAGGCAGTGGCTCACCCAGCACTTGGTGAGTGGAGGATGCTGGGACATGCGCGGGGAGCTGGGGTaGCAGCAGCTGAAAGGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LLRQWLTQHLVSGGCWDMRGELG*QQLKGT Trigger: CGTCCCTTTCAGCTGCTGCAACCCCAGCTCCCCGCG...CATGTCCCAGCATCCTCCACTCACCAAGTGCTGGGTGAGCCACTGCCTGAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCCCTGGACTGGCCAGTCCTGTGAGCGTTCAGTCCTGGCCATCTGCTGCTTCCACTTGGCGTACTaGGCCGGGTCCAGGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TEPWTGQSCERSVLAICCFHLAY*AGSRAS Trigger: TGATGCCCTGGACCCGGCCAAGTACGCCAAGTGGAA...GCAGCAGATGGCCAGGACTGAACGCTCACAGGACTGGCCAGTCCAGGGCTCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS TCA 90 bp | GCTCCTCAGTCTGATGGTCATAGCTGTAGTGCGCCGAGTTGTTGGTaGGCTGGTACTGGATACAGGGCCGCGGGGAGCTGGGGTTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: APQSDGHSCSAPSCW*AGTGYRAAGSWGCS Trigger: GCTGCAACCCCAGCTCCCCGCGGCCCTGTATCCAGTACCAGCTCACCAACAACTCGGCGCACTACAGCTATGACCATCAGACTGAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS TCA 90 bp | CCAGCCTCTGGAGCCGGGCCTGCGTCTGCACCTTCAGCCTCCACCTaGTTGCTCTTGCCCAGCTTCTTAAAGCTCTCCAGAAAGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PASGAGPASAPSAST*LLLPSFLKLSRKAF Trigger: GAAGGCCTTTCTGGAGAGCTTTAAGAAGCTGGGCAAGAGCAATCAGGTGGAGGCTGAAGGTGCAGACGCAGGCCCGGCTCCAGAGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
||
| CDS CCA 90 bp | AGACAGCCAGGTACGGCTTCAGCCAGGGCTTCCACTTGGCGTACTTaGCCGGGTCCAGGGCATCATAGCAGATCTTCCCAGCCAGAGAGT | + |
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Preference number: 5 (lower is better) Translates to: RQPGTASARASTWRT*PGPGHHSRSSQPES Trigger: ACTCTCTGGCTGGGAAGATCTGCTATGATGCCCTGGACCCGGCCAAGTACGCCAAGTGGAAGCCCTGGCTGAAGCCGTACCTGGCTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CCA 90 bp | AGAAGATGCAGACAGCCAGGTACGGCTTCAGCCAGGGCTTCCACTTaGCGTACTTGGCCGGGTCCAGGGCATCATAGCAGATCTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: RRCRQPGTASARAST*RTWPGPGHHSRSSQ Trigger: CTGGGAAGATCTGCTATGATGCCCTGGACCCGGCCAAGTACGCCAAGTGGAAGCCCTGGCTGAAGCCGTACCTGGCTGTCTGCATCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS-3UTR CAA 90 bp | GACAAAGGGGGTATCCACAGTCCCTGGAGTCCACTAAGTGTTGAGGAGGGGGAGAGCCCCTGGGCCAACTaGACCCGCTTCTTCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: DKGGIHSPWSPLSVEEGESPWAN*TRFFWS Trigger: TGACCAGAAGAAGCGGGTCAAGTTGGCCCAGGGGCT...CTCCCCCTCCTCAACACTTAGTGGACTCCAGGGACTGTGGATACCCCCTTTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS TCA 90 bp | TGTAGTAATTCAGCAGAGCGGCCCTGCAGCCCCGCAGCCAGAGGTTaGGCTCCTCAGTCTGATGGTCATAGCTGTAGTGCGCCGAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: CSNSAERPCSPAARG*APQSDGHSCSAPSC Trigger: ACAACTCGGCGCACTACAGCTATGACCATCAGACTGAGGAGCTCAACCTCTGGCTGCGGGGCTGCAGGGCCGCTCTGCTGAATTACTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS-3UTR CAA 90 bp | ACTGAGGAGGGGAGAGGCCCTTGGTGTGGCCAGTCACCTATGAGAGATCTGGACACCCCTATCAGGGAGTaGGGCACAAAGTGGCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: TEEGRGPWCGQSPMRDLDTPIRE*GTKWLS Trigger: TGAGAGCCACTTTGTGCCCAACTCCCTGATAGGGGT...GTCCAGATCTCTCATAGGTGACTGGCCACACCAAGGGCCTCTCCCCTCCTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS-3UTR CAA 90 bp | AGAGTTAGAACCACACAGCACAGGCCAGCAGCAGCTGAGCCCTTGGGGACCAAGTTCCCAGCCAGAGAGTaGAAGACACAGGACAGGACC | + |
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Preference number: 5 (lower is better) Translates to: RVRTTQHRPAAAEPLGTKFPARE*KTQDRT Trigger: GGTCCTGTCCTGTGTCTTCAACTCTCTGGCTGGGAA...CTTGGTCCCCAAGGGCTCAGCTGCTGCTGGCCTGTGCTGTGTGGTTCTAACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS-3UTR CAA 90 bp | CTTCTCAGGCAGTGGCTCACCCAGCACTTGGTGAGTGGAGGATGCTGGGACATGCCATCCACGTTGCTCTaGATGCGATCTTTGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLRQWLTQHLVSGGCWDMPSTLL*MRSLTS Trigger: GGAGGTCAAAGATCGCATCAAGAGCAACGTGGATGG...CATGTCCCAGCATCCTCCACTCACCAAGTGCTGGGTGAGCCACTGCCTGAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CCA 90 bp | AACCAGTCCCGGAAGCCGTTGTTCCCACAGCACTTGAACTCAATCTaGAGCATGTCGATGGTCTTTTTCATGAAGCACCGGCCGGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: NQSRKPLFPQHLNSI*SMSMVFFMKHRPGV Trigger: CACCCCCGGCCGGTGCTTCATGAAAAAGACCATCGACATGCTCCAGATTGAGTTCAAGTGCTGTGGGAACAACGGCTTCCGGGACTGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CCA 90 bp | ACACAGGACAGGACCCCCACCCCTATCAGGGAGTTGGGCACAAAGTaGCTCTCAGAATTATTCATCACTTCGCTCCTCTTGCGAAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: TQDRTPTPIRELGTK*LSELFITSLLLRSS Trigger: TGAACTTCGCAAGAGGAGCGAAGTGATGAATAATTCTGAGAGCCACTTTGTGCCCAACTCCCTGATAGGGGTGGGGGTCCTGTCCTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS-3UTR CAA 90 bp | TCCTGTGCCATCTGTGAATTTCTATGTGGAGGTAACCTTCTGAGGGAGTCCAATTACCGCCCATCCACGTaGCTCTTGATGCGATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SCAICEFLCGGNLLRESNYRPST*LLMRSL Trigger: CAAAGATCGCATCAAGAGCAACGTGGATGGGCGGTA...ATTGGACTCCCTCAGAAGGTTACCTCCACATAGAAATTCACAGATGGCACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS-3UTR CAA 90 bp | CACAACAGTCCTTGTGGGTGCCATCCCACAAGGTGCCACCAAAATCATATTTTTATCACTTCGCTCCTCTaGCGAAGTTCAATCTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: HNSPCGCHPTRCHQNHIFITSLL*RSSIFK Trigger: CTTGAAGATTGAACTTCGCAAGAGGAGCGAAGTGAT...AAAAATATGATTTTGGTGGCACCTTGTGGGATGGCACCCACAAGGACTGTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS TCA 72 bp | GGATACAGGGCCGCGGGGAGCTGGGGTTGCAGCAGCTaGAAGGGACGCCGTCCACCAGGTACCGCCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: GYRAAGSWGCSS*KGRRPPGTAHP Trigger: TGGATGGGCGGTACCTGGTGGACGGCGTCCCTTTCAGCTGCTGCAACCCCAGCTCCCCGCGGCCCTGTATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CCA 72 bp | GGTACGGCTTCAGCCAGGGCTTCCACTTGGCGTACTTaGCCGGGTCCAGGGCATCATAGCAGATCTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GTASARASTWRT*PGPGHHSRSSQ Trigger: CTGGGAAGATCTGCTATGATGCCCTGGACCCGGCCAAGTACGCCAAGTGGAAGCCCTGGCTGAAGCCGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CCA 72 bp | AGACAGCCAGGTACGGCTTCAGCCAGGGCTTCCACTTaGCGTACTTGGCCGGGTCCAGGGCATCATAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RQPGTASARAST*RTWPGPGHHSR Trigger: TCTGCTATGATGCCCTGGACCCGGCCAAGTACGCCAAGTGGAAGCCCTGGCTGAAGCCGTACCTGGCTGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS TCA 72 bp | TCTGATGGTCATAGCTGTAGTGCGCCGAGTTGTTGGTaGGCTGGTACTGGATACAGGGCCGCGGGGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SDGHSCSAPSCW*AGTGYRAAGSW Trigger: CCAGCTCCCCGCGGCCCTGTATCCAGTACCAGCTCACCAACAACTCGGCGCACTACAGCTATGACCATCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CAA 90 bp | CAGCAGCTGAAAGGGACGCCGTCCACCAGGTACCGCCCATCCACGTaGCTCTTGATGCGATCTTTGACCTCCTTGGAGGAGAAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QQLKGTPSTRYRPST*LLMRSLTSLEEKSR Trigger: CCTGGACTTCTCCTCCAAGGAGGTCAAAGATCGCATCAAGAGCAACGTGGATGGGCGGTACCTGGTGGACGGCGTCCCTTTCAGCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CAA 72 bp | ACGCCGTCCACCAGGTACCGCCCATCCACGTTGCTCTaGATGCGATCTTTGACCTCCTTGGAGGAGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TPSTRYRPSTLL*MRSLTSLEEKS Trigger: GGACTTCTCCTCCAAGGAGGTCAAAGATCGCATCAAGAGCAACGTGGATGGGCGGTACCTGGTGGACGGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CAA 72 bp | AAAGGGACGCCGTCCACCAGGTACCGCCCATCCACGTaGCTCTTGATGCGATCTTTGACCTCCTTGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: KGTPSTRYRPST*LLMRSLTSLEE Trigger: CTCCTCCAAGGAGGTCAAAGATCGCATCAAGAGCAACGTGGATGGGCGGTACCTGGTGGACGGCGTCCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS TCA 72 bp | GGGTGTCCGTATCCCGATAATACTTCATCCCATTCTTaGGTCCGTAAGCCAGGGTGCTCTCCAGGGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: GCPYPDNTSSHS*VRKPGCSPGSP Trigger: GGGGCTCCCTGGAGAGCACCCTGGCTTACGGACTCAAGAATGGGATGAAGTATTATCGGGATACGGACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS TCA 72 bp | TCTTGCGAAGTTCAATCTTCAAGAACAGCCCCAAGCTaGAGAGGACGATGCCGGCCAACACGGACAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SCEVQSSRTAPS*RGRCRPTRTAS Trigger: ACTGGCTGTCCGTGTTGGCCGGCATCGTCCTCTTCAGCTTGGGGCTGTTCTTGAAGATTGAACTTCGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CCA 72 bp | AGGACCCCCACCCCTATCAGGGAGTTGGGCACAAAGTaGCTCTCAGAATTATTCATCACTTCGCTCCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RTPTPIRELGTK*LSELFITSLLL Trigger: CAAGAGGAGCGAAGTGATGAATAATTCTGAGAGCCACTTTGTGCCCAACTCCCTGATAGGGGTGGGGGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CAA 90 bp | AGAGAGTTGAAGACACAGGACAGGACCCCCACCCCTATCAGGGAGTaGGGCACAAAGTGGCTCTCAGAATTATTCATCACTTCGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RELKTQDRTPTPIRE*GTKWLSELFITSLL Trigger: GAGGAGCGAAGTGATGAATAATTCTGAGAGCCACTTTGTGCCCAACTCCCTGATAGGGGTGGGGGTCCTGTCCTGTGTCTTCAACTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS TCA 72 bp | CGAACCAGTCCCGGAAGCCGTTGTTCCCACAGCACTTaGACTCAATCTGGAGCATGTCGATGGTCTTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RTSPGSRCSHST*TQSGACRWSFS Trigger: TGAAAAAGACCATCGACATGCTCCAGATTGAGTTCAAGTGCTGTGGGAACAACGGCTTCCGGGACTGGTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CCA 72 bp | AGACACAGGACAGGACCCCCACCCCTATCAGGGAGTTaGGCACAAAGTGGCTCTCAGAATTATTCATCACTT | + |
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Preference number: 6 (lower is better) Translates to: RHRTGPPPLSGS*AQSGSQNYSSL Trigger: AAGTGATGAATAATTCTGAGAGCCACTTTGTGCCCAACTCCCTGATAGGGGTGGGGGTCCTGTCCTGTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CCA 72 bp | CGGAAGCCGTTGTTCCCACAGCACTTGAACTCAATCTaGAGCATGTCGATGGTCTTTTTCATGAAGCACCGG | + |
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Preference number: 6 (lower is better) Translates to: RKPLFPQHLNSI*SMSMVFFMKHR Trigger: CCGGTGCTTCATGAAAAAGACCATCGACATGCTCCAGATTGAGTTCAAGTGCTGTGGGAACAACGGCTTCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CAA 72 bp | AAGACACAGGACAGGACCCCCACCCCTATCAGGGAGTaGGGCACAAAGTGGCTCTCAGAATTATTCATCACT | + |
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Preference number: 6 (lower is better) Translates to: KTQDRTPTPIRE*GTKWLSELFIT Trigger: AGTGATGAATAATTCTGAGAGCCACTTTGTGCCCAACTCCCTGATAGGGGTGGGGGTCCTGTCCTGTGTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CAA 72 bp | TCGAACCAGTCCCGGAAGCCGTTGTTCCCACAGCACTaGAACTCAATCTGGAGCATGTCGATGGTCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SNQSRKPLFPQH*NSIWSMSMVFF Trigger: GAAAAAGACCATCGACATGCTCCAGATTGAGTTCAAGTGCTGTGGGAACAACGGCTTCCGGGACTGGTTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CAA 90 bp | TTGGGCACAAAGTGGCTCTCAGAATTATTCATCACTTCGCTCCTCTaGCGAAGTTCAATCTTCAAGAACAGCCCCAAGCTGAAGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: LGTKWLSELFITSLL*RSSIFKNSPKLKRT Trigger: CGTCCTCTTCAGCTTGGGGCTGTTCTTGAAGATTGAACTTCGCAAGAGGAGCGAAGTGATGAATAATTCTGAGAGCCACTTTGTGCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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| CDS CAA 72 bp | AAGTGGCTCTCAGAATTATTCATCACTTCGCTCCTCTaGCGAAGTTCAATCTTCAAGAACAGCCCCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: KWLSELFITSLL*RSSIFKNSPKL Trigger: CAGCTTGGGGCTGTTCTTGAAGATTGAACTTCGCAAGAGGAGCGAAGTGATGAATAATTCTGAGAGCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024773.6 |
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