RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRPF8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020850

Ensembl transcript IDs: ENSMUST00000018449.11, ENSMUST00000102510.8, ENSMUST00000131283.3

Found 696 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTaGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCA +
Preference number: 1 (lower is better)
Translates to: AQNAKGLTAECQQLV*GGRSRGSRLWGSEA
Trigger: TGCTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
3UTR TCA 90 bp CAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTaGATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAG +
Preference number: 1 (lower is better)
Translates to: QSINNTSTERKGADC*MSAACLGRAFKRLQ
Trigger: CTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
3UTR-3UTR CCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTTGTCAGCAGCTTGTCTaGGGAGGGCGTTCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: FCSGLQSINNTSTERKGACQQLV*GGRSRG
Trigger: GCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
3UTR CCA 72 bp GCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTaGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGA +
Preference number: 3 (lower is better)
Translates to: AKGLTAECQQLV*GGRSRGSRLWG
Trigger: TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCCCTGGCGGCAAACCTaGAGCCCTACCTCCACCCAG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSPWRQT*SPTSTQ
Trigger: CTGGGTGGAGGTAGGGCTGCAGGTTTGCCGCCAGGG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGGCAGGTGCACAGTCTaGTGCGTGCCCCACTGCGGC +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEGRCTV*CVPHCG
Trigger: GCCGCAGTGGGGCACGCACCAGACTGTGCACCTGCC...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCGGCACGTCCCGGATCTaGTCCCAAGGCATGGGCATG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSGTSRI*SQGMGM
Trigger: CATGCCCATGCCTTGGGAGCAGATCCGGGACGTGCC...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCGCACAGTCTGGTGCGTaGCCCACTGCGGCACCATCA +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSAQSGA*PTAAPS
Trigger: TGATGGTGCCGCAGTGGGGCACGCACCAGACTGTGC...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGAGGTGCACAGTCTGGTaGGTGCCCCACTGCGGCACC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKRCTVW*VPHCGT
Trigger: GGTGCCGCAGTGGGGCACGCACCAGACTGTGCACCT...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGAGCTGGCTGGGCAGGTaGACAGTCTGGTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKSWLGR*TVWCVP
Trigger: GGGCACGCACCAGACTGTGCACCTGCCCAGCCAGCT...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGGACCAGAGCGTAGGTTaGAGGGCCGTGGTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGDQSVG*RAVVPR
Trigger: TCTGGGCACCACGGCCCTTCAACCTACGCTCTGGTC...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCGAACCTTCACAGGCTaGCCAGCAGGACAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSRTFTG*PAGQCS
Trigger: GGAGCACTGTCCTGCTGGGCAGCCTGTGAAGGTTCG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGGCCCATCGAGAGCATaGCAAGCCCACCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSGPSRA*QAHPAP
Trigger: AGGAGCTGGGTGGGCTTGGCATGCTCTCGATGGGCC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGCTATCTGCTGCCGCTaGTGCGATGGCGCCGAGATC +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSAICCR*CDGAEI
Trigger: GATCTCGGCGCCATCGCAGCAGCGGCAGCAGATAGC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGGCTATCTGCTGCCGCTaGTGCGATGGCGCCGAGATC +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGAICCR*CDGAEI
Trigger: GATCTCGGCGCCATCGCAGCAGCGGCAGCAGATAGC...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCCTTCCAAGGGATGTTaGCCTTCCAGCAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSPSKGC*PSSSAR
Trigger: CCTGGCGCTGCTGGAAGGCCAACATCCCTTGGAAGG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTCTGCCGCTGCTGCGATaGCGCCGAGATCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRLPLLR*RRDLHS
Trigger: GGAATGGAGATCTCGGCGCCATCGCAGCAGCGGCAG...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCCACCCCCTTTGAGTaGCGGCCTTCAAACTGTCGG +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEATPFE*RPSNCR
Trigger: CCGACAGTTTGAAGGCCGTCACTCAAAGGGGGTGGC...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGACCGAGACTCCAGCATaGCGTTGCACTCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKTETPA*RCTRPH
Trigger: GTGAGGGCGAGTGCAACGTCATGCTGGAGTCTCGGT...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTACCGAGACTCCAGCATaGCGTTGCACTCGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSTETPA*RCTRPH
Trigger: GTGAGGGCGAGTGCAACGTCATGCTGGAGTCTCGGT...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCCCGCTGGGAGTCAATaGACTCGCTCTCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKPAGSQ*TRSPMA
Trigger: AGCCATGGGAGAGCGAGTTCATTGACTCCCAGCGGG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTCCCGCTGGGAGTCAATaGACTCGCTCTCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRPAGSQ*TRSPMA
Trigger: AGCCATGGGAGAGCGAGTTCATTGACTCCCAGCGGG...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCCAGATCAATGGCAATaGGCACGCCTGTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSPDQWQ*ARLWAK
Trigger: CTTCGCCCACAGGCGTGCTCATTGCCATTGATCTGG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGGTCGGGCCAGAAGGTTaGCCAGCCATCGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGVGPEG*PAIALA
Trigger: TGCTAGAGCGATGGCTGGGCAACCTTCTGGCCCGAC...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCAGGCTTCACTGAGGTaGTGCAGAATTGTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSQASLR*CRIVRA
Trigger: GGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCTGCCGCTCCTGCTCTaGCTTCAGATACAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSLPLLL*LQIQAS
Trigger: ACTCGCCTGTATCTGAAGGCAGAGCAGGAGCGGCAG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCGGCTCTCCAGCCAGTaGACAGTGGTGGTATACACG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSRLSSQ*TVVVYT
Trigger: CGTGTATACCACCACTGTGCACTGGCTGGAGAGCCG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAGAGTGTGCTCCAGAATaGCCTCCACACCACCCAGCG +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGECAPE*PPHHPA
Trigger: CGCTGGGTGGTGTGGAGGGCATTCTGGAGCACACTC...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCCTTCCAAGGGATGTTaGCCTTCCAGCAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWPSKGC*PSSSAR
Trigger: CCTGGCGCTGCTGGAAGGCCAACATCCCTTGGAAGG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAGCCCAGCCATCTCACTaGCCCGGTGCAATCCCAGTA +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGAQPSH*PGAIPV
Trigger: TACTGGGATTGCACCGGGCCAGTGAGATGGCTGGGC...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGTTGAGGTACTCATGCTaGGGCAGCTGGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGLRYSC*GSWLGR
Trigger: CCTGCCCAGCCAGCTGCCCCAGCATGAGTACCTCAA...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTGGGTCCAGCTCTAGCTaGATGGCTTCCAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRGSSSS*MASSGS
Trigger: TGAGCCACTGGAAGCCATTCAGCTAGAGCTGGACCC...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGGGTCCAGCTCTAGCTaGATGGCTTCCAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSGSSSS*MASSGS
Trigger: TGAGCCACTGGAAGCCATTCAGCTAGAGCTGGACCC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTGGGAGGCCGGTGCTTaGGGGCATTCAGCACATAGT +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRWEAGA*GHSAHS
Trigger: ACTATGTGCTGAATGCCCTCAAGCACCGGCCTCCCA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAACACGCAGGAAGCACTaGGCTGTCCGCTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSETRRKH*AVRSLV
Trigger: TACCAAGGAGCGGACAGCTCAGTGCTTCCTGCGTGT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGACCATGGCCTGCTGTATaGGAGGCTTGCTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGPWPAV*EACCPG
Trigger: TCCCGGGCAGCAAGCCTCTCATACAGCAGGCCATGG...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCAGGGTTTGCCTTCATaGTCTTGGCCATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSQGLPS*SWPWPA
Trigger: AGCAGGCCATGGCCAAGATCATGAAGGCAAACCCTG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAACGGATCTCCTTCACCTaGGGGTTATCTGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSERISFT*GLSGGL
Trigger: GAGCCCTCCAGATAACCCTCAGGTGAAGGAGATCCG...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGGATCTCCTTCACCTaGGGGTTATCTGGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGRISFT*GLSGGL
Trigger: GAGCCCTCCAGATAACCCTCAGGTGAAGGAGATCCG...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGAGCTCCAGGTCAAAGTaGGACTCCACCCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWSSRSK*DSTRCF
Trigger: GAAGCAGCGGGTGGAGTCGCACTTTGACCTGGAGCT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCGTCCGGGCCTTGTTCTaGTTGATGCCTTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSVRALF*LMPSGI
Trigger: GATGCCTGAAGGCATCAAGCAGAACAAGGCCCGGAC...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAACTGCCGCTCCTGCTCTaGCTTCAGATACAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSELPLLL*LQIQAS
Trigger: ACTCGCCTGTATCTGAAGGCAGAGCAGGAGCGGCAG...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACGGCTCTCCAGCCAGTaGACAGTGGTGGTATACACG +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGRLSSQ*TVVVYT
Trigger: CGTGTATACCACCACTGTGCACTGGCTGGAGAGCCG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGAGCTGGCTGGGCAGGTaGACAGTCTGGTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWSWLGR*TVWCVP
Trigger: GGGCACGCACCAGACTGTGCACCTGCCCAGCCAGCT...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTTCAGCCCAGACCCGCTaGGAGTCAATGAACTCGCTC +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSSAQTR*ESMNSL
Trigger: GAGCGAGTTCATTGACTCCCAGCGGGTCTGGGCTGA...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGTCAGCCCAGACCCGCTaGGAGTCAATGAACTCGCTC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKSAQTR*ESMNSL
Trigger: GAGCGAGTTCATTGACTCCCAGCGGGTCTGGGCTGA...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTCTGCAGCTTCTCCTCTaGCATATAATCCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSLQLLL*HIIRQR
Trigger: CCGCTGCCGGATTATATGTCAGAGGAGAAGCTGCAG...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCTGCAGCTTCTCCTCTaGCATATAATCCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGLQLLL*HIIRQR
Trigger: CCGCTGCCGGATTATATGTCAGAGGAGAAGCTGCAG...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAACTTTGCCACCCCCTTTaGGTGACGGCCTTCAAACTG +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSELCHPL*VTAFKL
Trigger: CAGTTTGAAGGCCGTCACTCAAAGGGGGTGGCAAAG...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTCCCAGCTCCTCCCTCTaGGACTGGTTTAACCTAGAC +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSPSSSL*DWFNLD
Trigger: GTCTAGGTTAAACCAGTCTCAGAGGGAGGAGCTGGG...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACCCAGCTCCTCCCTCTaGGACTGGTTTAACCTAGAC +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGPSSSL*DWFNLD
Trigger: GTCTAGGTTAAACCAGTCTCAGAGGGAGGAGCTGGG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCTCTGTGTGAGGAGGTaGCGCTTGATGCGGGACAAA +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWLCVRR*RLMRDK
Trigger: TTTGTCCCGCATCAAGCGTCACCTCCTCACACAGAG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGCCATGGCCTGCTGTATaGGAGGCTTGCTGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWPWPAV*EACCPG
Trigger: TCCCGGGCAGCAAGCCTCTCATACAGCAGGCCATGG...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCCCGCAGAATCAGAATaGGACGGGAGAAAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKPAESE*DGRKPC
Trigger: ACACGGCTTTCTCCCGTCTCATTCTGATTCTGCGGG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGAGGGTTCCATCTCCTTaGGGTACTCATGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKRVPSP*GTHAGA
Trigger: TGCCCCAGCATGAGTACCTCAAGGAGATGGAACCCT...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGCACGTCCCGGATCTaGTCCCAAGGCATGGGCATG +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWGTSRI*SQGMGM
Trigger: CATGCCCATGCCTTGGGAGCAGATCCGGGACGTGCC...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACCCAGAGCAGGGCAATaGCATTGGCTGTGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGPRAGQ*HWLCCL
Trigger: CAGACAACACAGCCAATGGCATTGCCCTGCTCTGGG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCCCAGAGCAGGGCAATaGCATTGGCTGTGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKPRAGQ*HWLCCL
Trigger: CAGACAACACAGCCAATGGCATTGCCCTGCTCTGGG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGTCGGGCCAGAAGGTTaGCCAGCCATCGCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGVGPEG*PAIALA
Trigger: TGCTAGAGCGATGGCTGGGCAACCTTCTGGCCCGAC...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGTGCGACTCCACCCGCTaGTTCGTTACTGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWCDSTR*FVTVFA
Trigger: GGCAAAGACAGTAACGAAGCAGCGGGTGGAGTCGCA...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCATGTCCAGAATGTCGTaGATCACAGCAGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSMSRMS*ITAALS
Trigger: GCTCAGGGCTGCTGTGATGCACGACATTCTGGACAT...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAGCTTCACTGAGGTGCTaGAGAATTGTCCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGASLRC*RIVRAL
Trigger: CAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGC...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGGCTTCACTGAGGTGCTaGAGAATTGTCCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKASLRC*RIVRAL
Trigger: CAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGC...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGTTGTGCTGCCGCTCCTaGTCTGCCTTCAGATACAGG +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKLCCRS*SAFRYR
Trigger: CCTGTATCTGAAGGCAGAGCAGGAGCGGCAGCACAA...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTGGTATACACGGCCACTaGCTCCTCGGCTGTGATGTA +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRGIHGH*LLGCDV
Trigger: TACATCACAGCCGAGGAGGCAGTGGCCGTGTATACC...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGAGTCGGATTGGGTGTaGAGCCTCAGTGGCTATGTC +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEESDWV*SLSGYV
Trigger: GACATAGCCACTGAGGCTGCACACCCAATCCGACTC...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAGTCGGATTGGGTGTaGAGCCTCAGTGGCTATGTC +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSESDWV*SLSGYV
Trigger: GACATAGCCACTGAGGCTGCACACCCAATCCGACTC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAATCTCAGCTATCTaGTGCCGCTGCTGCGATGGC +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRSISAI*CRCCDG
Trigger: GCCATCGCAGCAGCGGCAGCAGATAGCTGAGATTGA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGTGGTGCGTGCCCCACTaGGGCACCATCACAATACAA +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGWCVPH*GTITIQ
Trigger: TTGTATTGTGATGGTGCCGCAGTGGGGCACGCACCA...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGATGGCTCCAGTGATGTaGTACAGCACAGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGMAPVM*YSTGTS
Trigger: GGACGTGCCTGTGCTGTACCACATCACTGGAGCCAT...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGTGGTACCAGGTCAGGTaGACGTGGTGTGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGWYQVR*TWCGRL
Trigger: CAACCTTCCACACCACGTCCACCTGACCTGGTACCA...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAATGCTTGTAGGAGAGTaGAGGGAAGGGGATGGGCGA +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEMLVGE*REGDGR
Trigger: TCGCCCATCCCCTTCCCTCCACTCTCCTACAAGCAT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGACAGAAGAGTCGGATTaGGTGTGCAGCCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWTEESD*VCSLSG
Trigger: GCCACTGAGGCTGCACACCCAATCCGACTCTTCTGT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGACAGAAGAGTCGGATTaGGTGTGCAGCCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGTEESD*VCSLSG
Trigger: GCCACTGAGGCTGCACACCCAATCCGACTCTTCTGT...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAATGGGGGATAAGCACATaGCCCATCGAGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEWGIST*PIESMP
Trigger: TGGCATGCTCTCGATGGGCCATGTGCTTATCCCCCA...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGTGGGCCAGATGTGGTaGGGTTCCGTAACAGTAGTC +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSVGQMW*GSVTVV
Trigger: GACTACTGTTACGGAACCCCACCACATCTGGCCCAC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGGTGGGCCAGATGTGGTaGGGTTCCGTAACAGTAGTC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKVGQMW*GSVTVV
Trigger: GACTACTGTTACGGAACCCCACCACATCTGGCCCAC...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTAGCGTGGGCCAGATGTaGTGGGGTTCCGTAACAGTA +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRSVGQM*WGSVTV
Trigger: TACTGTTACGGAACCCCACCACATCTGGCCCACGCT...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGAGCGTGGGCCAGATGTaGTGGGGTTCCGTAACAGTA +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWSVGQM*WGSVTV
Trigger: TACTGTTACGGAACCCCACCACATCTGGCCCACGCT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCTGTGTAGCAGTGAGCTaGGACTGTTCCTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSCVAVS*DCSLVC
Trigger: GCAGACCAAGGAACAGTCCCAGCTCACTGCTACACA...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCACCTGAGGGTTATCTaGAGGGCTCACCCCATACAG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGHLRVI*RAHPIQ
Trigger: CTGTATGGGGTGAGCCCTCCAGATAACCCTCAGGTG...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCCCACTCATACCCACTaGGTGTCAGCTTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWPTHTH*VSACRL
Trigger: CAGCCTACAAGCTGACACCCAGTGGGTATGAGTGGG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCCCACTCATACCCACTaGGTGTCAGCTTGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGPTHTH*VSACRL
Trigger: CAGCCTACAAGCTGACACCCAGTGGGTATGAGTGGG...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAACCCGATACCAGTTCTTaGCAAGGGGTATGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEPDTSS*QGVCPR
Trigger: CCTTGGACATACCCCTTGTCAAGAACTGGTATCGGG...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGGGGCCTTGTTCTGCTTaGTGCCTTCAGGCATCATGT +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGGPCSA*CLQASC
Trigger: ACATGATGCCTGAAGGCATCAAGCAGAACAAGGCCC...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGCTCCAGAGCCAAGATaGGCAGCTTGGTATCATGCT +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSAPEPR*AAWYHA
Trigger: AGCATGATACCAAGCTGCTCATCTTGGCTCTGGAGC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTAAGTCATTTGGCATCTaGGGAGGCCCAGCCATCTCA +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSKSFGI*GGPAIS
Trigger: TGAGATGGCTGGGCCTCCTCAGATGCCAAATGACTT...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCGTCAAGCGTCTGTTCTaGGCAATAGCCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSVKRLF*AIASCL
Trigger: GAGACAAGAGGCTATTGCTCAGAACAGACGCTTGAC...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTTCTGGAAGAGGGTATTaGTCCGGGGAATGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSSGRGY*SGECLD
Trigger: ATCGAGGCATTCCCCGGATCAATACCCTCTTCCAGA...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTGGATCTTGCCGTGCATaGAGATTCCTGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRGSCRA*RFLSGP
Trigger: TGGACCTGACAGGAATCTTCATGCACGGCAAGATCC...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCAAACTTCTCCACCTTaGGACAAGCCTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGQTSPP*DKPGRA
Trigger: TGCCCTTCCAGGCTTGTCTCAAGGTGGAGAAGTTTG...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCAAACTTCTCCACCTTaGGACAAGCCTGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKQTSPP*DKPGRA
Trigger: TGCCCTTCCAGGCTTGTCTCAAGGTGGAGAAGTTTG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACAGCAGAGATGGCCCTaGCTCTCCATTCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGQQRWP*LSIQSL
Trigger: CAAAGACTGAATGGAGAGTCAGGGCCATCTCTGCTG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGGGGATTCATTGGGCTaGGTGTGGATCCAACCTAAG +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEGDSLG*VWIQPK
Trigger: CTTAGGTTGGATCCACACTCAGCCCAATGAATCCCC...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTCGCTTGGCCTGCAACTaGTGCCATTTTCGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRRLACN*CHFRAF
Trigger: GAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAAGCG...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACGCTTGGCCTGCAACTaGTGCCATTTTCGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGRLACN*CHFRAF
Trigger: GAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAAGCG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAATGTCCAGAATGTCGTaGATCACAGCAGCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEMSRMS*ITAALS
Trigger: GCTCAGGGCTGCTGTGATGCACGACATTCTGGACAT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCATCTCACTGGCCCGGTaGAATCCCAGTACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSISLAR*NPSTSK
Trigger: TTTGCTTGTACTGGGATTGCACCGGGCCAGTGAGAT...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGTGGGGATCTTGCCGTaGATGAAGATTCCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSVGILP*MKIPVR
Trigger: CCTGACAGGAATCTTCATGCACGGCAAGATCCCCAC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTATCTTGGCCATGGCCTaGTGTATGAGAGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSILAMA*CMRGLL
Trigger: CAGCAAGCCTCTCATACAGCAGGCCATGGCCAAGAT...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGAGGTGCACAGTCTGGTaGGTGCCCCACTGCGGCACC +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQRCTVW*VPHCGT
Trigger: GGTGCCGCAGTGGGGCACGCACCAGACTGTGCACCT...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCCTGACATGTTCTGGTaGCATGTCTTCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSPDMFW*HVFLLS
Trigger: GCTCAGAAGGAAGACATGCCACCAGAACATGTCAGG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGTCTGCTCCCAAGGCATaGGCATGTTCTCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGSAPKA*ACSQGA
Trigger: AGCTCCTTGAGAACATGCCCATGCCTTGGGAGCAGA...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTTCTGCTCCCAAGGCATaGGCATGTTCTCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSSAPKA*ACSQGA
Trigger: AGCTCCTTGAGAACATGCCCATGCCTTGGGAGCAGA...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCAGTCAGAAGCTGATTaGCCAGTCGGTAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKQSEAD*PVGRVW
Trigger: CCACACTCTACCGACTGGCCAATCAGCTTCTGACTG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCTGTAGTGGGCAGTATTaGTCCACCAATCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSCSGQY*STNQPW
Trigger: CCAAGGCTGATTGGTGGACCAATACTGCCCACTACA...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCGAACTCGCTCTCCCATaGCTGTATGTAGCGGTACAA +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSELALP*LYVAVQ
Trigger: TTGTACCGCTACATACAGCCATGGGAGAGCGAGTTC...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCACTCCTCAAAGCCACTaGCTTTCTCCCAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSTPQSH*LSPRTD
Trigger: GTCTGTTCTGGGAGAAAGCCAGTGGCTTTGAGGAGT...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAACAGCAGTCTTCCACTTaGCCAACTGACCCAAACGCT +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEQQSST*PTDPNA
Trigger: AGCGTTTGGGTCAGTTGGCCAAGTGGAAGACTGCTG...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCAGCAGTCTTCCACTTaGCCAACTGACCCAAACGCT +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKQQSST*PTDPNA
Trigger: AGCGTTTGGGTCAGTTGGCCAAGTGGAAGACTGCTG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGTGTGTAGCAGTGAGCTaGGACTGTTCCTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWCVAVS*DCSLVC
Trigger: GCAGACCAAGGAACAGTCCCAGCTCACTGCTACACA...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGTTGAGGTACTCATGCTaGGGCAGCTGGCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWLRYSC*GSWLGR
Trigger: CCTGCCCAGCCAGCTGCCCCAGCATGAGTACCTCAA...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGGTAGGTAGCCTTTaGGGTTGTTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSRVGSL*GCCLCL
Trigger: CAGACAAAGGCAACAACCCCAAAGGCTACCTACCCT...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTGTTCTCAAGGAGCTTaGGGACTGCATGAGGCATGT +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRCSQGA*GLHEAC
Trigger: ACATGCCTCATGCAGTCCTCAAGCTCCTTGAGAACA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAACATCATGATCCACATTaGCCCCCACTGGGAGATGTA +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEHHDPH*PPLGDV
Trigger: TACATCTCCCAGTGGGGGTCAATGTGGATCATGATG...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAACACTATAAGCTTCCTTaGGACGCTCCAGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEHYKLP*DAPEPR
Trigger: TCTTGGCTCTGGAGCGTCTCAAGGAAGCTTATAGTG...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTCACTATAAGCTTCCTTaGGACGCTCCAGAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSHYKLP*DAPEPR
Trigger: TCTTGGCTCTGGAGCGTCTCAAGGAAGCTTATAGTG...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGACTCTGTGTGAGGAGGTaGCGCTTGATGCGGGACAAA +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGLCVRR*RLMRDK
Trigger: TTTGTCCCGCATCAAGCGTCACCTCCTCACACAGAG...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAATGGAAGCGTTGCATTaGCTCATCATCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEMEALH*LIIHTQ
Trigger: CTGCGTGTGGATGATGAGTCAATGCAACGCTTCCAT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAAGTAAGTGCCCTTaGAGAGAGTGTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWGSKCP*RECAPE
Trigger: TTCTGGAGCACACTCTCTTCAAGGGCACTTACTTCC...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGGGAAGTAAGTGCCCTTaGAGAGAGTGTGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGGSKCP*RECAPE
Trigger: TTCTGGAGCACACTCTCTTCAAGGGCACTTACTTCC...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGACCCGCAGAATCAGAATaGGACGGGAGAAAGCCGTGT +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGPAESE*DGRKPC
Trigger: ACACGGCTTTCTCCCGTCTCATTCTGATTCTGCGGG...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTGCCATGATTTTGGCATaGGTGGTGACATCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRAMILA*VVTSWG
Trigger: ACCCCAAGATGTCACCACTCATGCCAAAATCATGGC...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCATATCGCTTGGCCTaGAACTGCTGCCATTTTCGA +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEAYRLA*NCCHFR
Trigger: TCGAAAATGGCAGCAGTTGCAGGCCAAGCGATATGC...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAATCTCACTGGCCCGGTaGAATCCCAGTACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEISLAR*NPSTSK
Trigger: TTTGCTTGTACTGGGATTGCACCGGGCCAGTGAGAT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGGCCCATCGAGAGCATaGCAAGCCCACCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLGPSRA*QAHPAP
Trigger: AGGAGCTGGGTGGGCTTGGCATGCTCTCGATGGGCC...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGACTTCTGTGTGGTGGTaGTGTCCATCACATCCTTGG +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWTSVWW*CPSHPW
Trigger: CCAAGGATGTGATGGACAGCACCACCACACAGAAGT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGAGCCTTTGGGGTTGTTaGCTTTGTCTGTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKSLWGC*LCLCSA
Trigger: GGCAGAACACAGACAAAGGCAACAACCCCAAAGGCT...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACCTGACATGTTCTGGTaGCATGTCTTCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGPDMFW*HVFLLS
Trigger: GCTCAGAAGGAAGACATGCCACCAGAACATGTCAGG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTGACGGAACTTCCTGTTaGTCATGTCTCCATGGTCTC +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRDGTSC*SCLHGL
Trigger: GAGACCATGGAGACATGACCAACAGGAAGTTCCGTC...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGACGGAACTTCCTGTTaGTCATGTCTCCATGGTCTC +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSDGTSC*SCLHGL
Trigger: GAGACCATGGAGACATGACCAACAGGAAGTTCCGTC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAAGGCTTGATCCAGGGTaGGAAAAGACGGCGTTTATC +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGRLDPG*EKTAFI
Trigger: GATAAACGCCGTCTTTTCCCACCCTGGATCAAGCCT...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTTGCCGCACACGGTTATaGAAGCGTTGCATTGACTCA +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSCRTRL*KRCIDS
Trigger: TGAGTCAATGCAACGCTTCCATAACCGTGTGCGGCA...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGTGCCGCACACGGTTATaGAAGCGTTGCATTGACTCA +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKCRTRL*KRCIDS
Trigger: TGAGTCAATGCAACGCTTCCATAACCGTGTGCGGCA...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTGAACTCGCTCTCCCATaGCTGTATGTAGCGGTACAA +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRELALP*LYVAVQ
Trigger: TTGTACCGCTACATACAGCCATGGGAGAGCGAGTTC...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCAGCTGTCCCGTTCGTaGATTGAAGATGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKQLSRS*IEDEDG
Trigger: GCCATCTTCATCTTCAATCCACGAACGGGACAGCTG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCAGCTGTCCCGTTCGTaGATTGAAGATGAAGATGGC +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWQLSRS*IEDEDG
Trigger: GCCATCTTCATCTTCAATCCACGAACGGGACAGCTG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGAGGGTAGGTAGCCTTTaGGGTTGTTGCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWRVGSL*GCCLCL
Trigger: CAGACAAAGGCAACAACCCCAAAGGCTACCTACCCT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCATGGTAGAATTCCTTaGGGTTTGCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWHGRIP*GLPAAA
Trigger: AGCTGCAGCTGGCAAACCCCAAGGAATTCTACCATG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGGGCATGTCTTCCTTCTaGGCATCCACAAACCCAAAT +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGGMSSF*ASTNPN
Trigger: ATTTGGGTTTGTGGATGCTCAGAAGGAAGACATGCC...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGAGGAGATGGCTCCAGTaGTGTGGTACAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWRRWLQ*CGTAQA
Trigger: TGCCTGTGCTGTACCACATCACTGGAGCCATCTCCT...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATTCTTGGCTCTTGACTaGGTGTCTATGGGAGATTGG +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGFLALD*VSMGDW
Trigger: CCAATCTCCCATAGACACTCAGTCAAGAGCCAAGAA...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGGCCACCCCCTTTGAGTaGCGGCCTTCAAACTGTCGG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQATPFE*RPSNCR
Trigger: CCGACAGTTTGAAGGCCGTCACTCAAAGGGGGTGGC...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCCTTGTTCTGCTTaGTGCCTTCAGGCATCATGT +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGGPCSA*CLQASC
Trigger: ACATGATGCCTGAAGGCATCAAGCAGAACAAGGCCC...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAGTACTGTACAATGAATaGGGCAAACTGCAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGVLYNE*GKLQAS
Trigger: AGAGGCCTGCAGTTTGCCTCATTCATTGTACAGTAC...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTGTACTGTACAATGAATaGGGCAAACTGCAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRVLYNE*GKLQAS
Trigger: AGAGGCCTGCAGTTTGCCTCATTCATTGTACAGTAC...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCAAAGCCACACATGTTaGATAGCAGGTTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGQSHTC*IAGWGC
Trigger: ACAACCCCAACCTGCTATTCAACATGTGTGGCTTTG...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGTTCATGACTCATTCCTaGACGGAAGTGTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKFMTHS*TEVCDA
Trigger: GGCATCACACACTTCCGTTCAGGAATGAGTCATGAA...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGTTGGTCTTCTTCATaGCTCATTCCTGAACGGAAG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSSWSSS*LIPERK
Trigger: CTTCCGTTCAGGAATGAGTCATGAAGAAGACCAACT...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCTCGGAATATCTGGATaGGAGAGATCTTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGLGISG*ERSSVW
Trigger: CCACACTGAAGATCTCTCTCATCCAGATATTCCGAG...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAATGTGTGGATTATCTTaGGGAACAGCTGTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEMCGLS*GTAVPF
Trigger: GAACGGGACAGCTGTTCCTCAAGATAATCCACACAT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGATGTGTGGATTATCTTaGGGAACAGCTGTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKMCGLS*GTAVPF
Trigger: GAACGGGACAGCTGTTCCTCAAGATAATCCACACAT...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTTTTGGCATGAGTGGTaGCATCTTGGGGTGATAGCT +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRFWHEW*HLGVIA
Trigger: AGCTATCACCCCAAGATGTCACCACTCATGCCAAAA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATTTTGGCATGAGTGGTaGCATCTTGGGGTGATAGCT +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGFWHEW*HLGVIA
Trigger: AGCTATCACCCCAAGATGTCACCACTCATGCCAAAA...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTATACTGCAAACCATCTaGCAGCTGGAAGGCATCTAC +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRILQTI*QLEGIY
Trigger: GTAGATGCCTTCCAGCTGGCAGATGGTTTGCAGTAT...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTATACTGCAAACCATCTaGCAGCTGGAAGGCATCTAC +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSILQTI*QLEGIY
Trigger: GTAGATGCCTTCCAGCTGGCAGATGGTTTGCAGTAT...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCTTGCACATGCGGATCTaGCGCATCAGCTTATATTTG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSLHMRI*RISLYL
Trigger: CAAATATAAGCTGATGCGGCAGATCCGCATGTGCAA...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGTGCGACTCCACCCGCTaGTTCGTTACTGTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWCDSTR*FVTVFA
Trigger: GGCAAAGACAGTAACGAAGCAGCGGGTGGAGTCGCA...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCGGCCCAGGTTCTTTTTaGAAACAGTCTTGTCTACAG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSGPGSF*KQSCLQ
Trigger: CTGTAGACAAGACTGTTTGCAAAAAGAACCTGGGCC...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCATGAATGAGGCAAACTaGAGGCCTCTGATGATTCCA +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSMNEAN*RPLMIP
Trigger: TGGAATCATCAGAGGCCTGCAGTTTGCCTCATTCAT...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCGGTTATGGAAGCGTTaGATTGACTCATCATCCACA +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSRLWKR*IDSSST
Trigger: TGTGGATGATGAGTCAATGCAACGCTTCCATAACCG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGGAGTGTGCTCCAGAATaGCCTCCACACCACCCAGCG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQECAPE*PPHHPA
Trigger: CGCTGGGTGGTGTGGAGGGCATTCTGGAGCACACTC...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGTGGGGATCTTGCCGTaGATGAAGATTCCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGVGILP*MKIPVR
Trigger: CCTGACAGGAATCTTCATGCACGGCAAGATCCCCAC...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTACAAGTCCATCACGATaGTCTCATGGATCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRTSPSR*SHGSSA
Trigger: GGCAGAAGATCCATGAGAGCATCGTGATGGACTTGT...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACCCATACAGGTATCCTaGAATTTGGGCACGAAGATC +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGPIQVS*NLGTKI
Trigger: GATCTTCGTGCCCAAATTGCAGGATACCTGTATGGG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTCCTTGAGGTACTCATaGTGGGGCAGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLSLRYS*WGSWLG
Trigger: GCCCAGCCAGCTGCCCCAGCATGAGTACCTCAAGGA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATTGGGGTTTGCCAGCTaGAGCTCGTATTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGLGFAS*SSYFML
Trigger: CAACATGAAATACGAGCTGCAGCTGGCAAACCCCAA...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGACAAGAGGCTCAAATTTaGGTCCCCCAGGAATGGCCA +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGQEAQI*VPQEWP
Trigger: TGGCCATTCCTGGGGGACCCAAATTTGAGCCTCTTG...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAGCAGGGCAATGCCATTaGCTGTGTTGTCTGTATAGA +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGAGQCH*LCCLYR
Trigger: TCTATACAGACAACACAGCCAATGGCATTGCCCTGC...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAATTCATTGTTGGGGTCTaGGTGTTCTGTCAGGTAACG +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEFIVGV*VFCQVT
Trigger: CGTTACCTGACAGAACACCCAGACCCCAACAATGAA...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGTTCATTGTTGGGGTCTaGGTGTTCTGTCAGGTAACG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGFIVGV*VFCQVT
Trigger: CGTTACCTGACAGAACACCCAGACCCCAACAATGAA...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACTGATCGCTGAGCATTaGTCAGCTTCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGLIAEH*SASSTS
Trigger: TGAAGTGGAAGAAGCTGACCAATGCTCAGCGATCAG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTCTGATCGCTGAGCATTaGTCAGCTTCTTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSLIAEH*SASSTS
Trigger: TGAAGTGGAAGAAGCTGACCAATGCTCAGCGATCAG...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGATGTAATCCAGGAACTTaGCCCGGGCATAGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGCNPGT*PGHSAQ
Trigger: TTGAGCGCTATGCCCGGGCCAAGTTCCTGGATTACA...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGACAGGTAAGGCTCAGTaGGCTCAGATGAATACAGCT +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGTGKAQ*AQMNTA
Trigger: AGCTGTATTCATCTGAGCCCACTGAGCCTTACCTGT...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGGCTGGGACTGTTCCTTaGTCTGCTTTTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKAGTVP*SAFQSQ
Trigger: CTGAGATTGAAAAGCAGACCAAGGAACAGTCCCAGC...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAGGCAGGTGCACAGTCTaGTGCGTGCCCCACTGCGGC +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEGRCTV*CVPHCG
Trigger: GCCGCAGTGGGGCACGCACCAGACTGTGCACCTGCC...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTCTCCCCATCCCAAGATaGGTTGTCAGCCATGATTTT +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRLPIPR*VVSHDF
Trigger: AAAATCATGGCTGACAACCCATCTTGGGATGGGGAG...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGATGTTCTCAAGGAGCTTaGGGACTGCATGAGGCATGT +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGCSQGA*GLHEAC
Trigger: ACATGCCTCATGCAGTCCTCAAGCTCCTTGAGAACA...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACTTCATCCTGTAAGTTaGTGTCTCGAACAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGLHPVS*CLEQEA
Trigger: AGCCTCTTGTTCGAGACATCAACTTACAGGATGAAG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCTTCATCCTGTAAGTTaGTGTCTCGAACAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKLHPVS*CLEQEA
Trigger: AGCCTCTTGTTCGAGACATCAACTTACAGGATGAAG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGTGGTTCTTGGCTCTTaGCTGAGTGTCTATGGGAGA +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGVVLGS*LSVYGR
Trigger: TCTCCCATAGACACTCAGTCAAGAGCCAAGAACCAC...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGTCCAGCTTGGTGGACTaGAAGAATTTGGTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKSSLVD*KNLVAL
Trigger: CAAAGCTACCAAATTCTTTCAGTCCACCAAGCTGGA...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTAGCGCCAGGCTTCACTaGGGTGCTGCAGAATTGTCC +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLSARLH*GAAELS
Trigger: GGACAATTCTGCAGCACCTCAGTGAAGCCTGGCGCT...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGCTCCAGAGCCAAGATaGGCAGCTTGGTATCATGCT +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWAPEPR*AAWYHA
Trigger: AGCATGATACCAAGCTGCTCATCTTGGCTCTGGAGC...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTAGTTGGTCTTCTTCATaGCTCATTCCTGAACGGAAG +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRSWSSS*LIPERK
Trigger: CTTCCGTTCAGGAATGAGTCATGAAGAAGACCAACT...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAATTTAATCCTGATCGCTaGGCATTGGTCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEFNPDR*ALVSFF
Trigger: GAAGAAGCTGACCAATGCTCAGCGATCAGGATTAAA...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTTTTAATCCTGATCGCTaGGCATTGGTCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSFNPDR*ALVSFF
Trigger: GAAGAAGCTGACCAATGCTCAGCGATCAGGATTAAA...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGGGAGCTCCGATCCTTTaGTCACAATATTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGGAPIL*SQYWGN
Trigger: ATTTCCCCAATATTGTGATCAAAGGATCGGAGCTCC...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGCCATGATTTTGGCATaGGTGGTGACATCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGAMILA*VVTSWG
Trigger: ACCCCAAGATGTCACCACTCATGCCAAAATCATGGC...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTTGGGCAAATATATACTaGAAACCATCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSWANIY*KPSASW
Trigger: CCAGCTGGCAGATGGTTTGCAGTATATATTTGCCCA...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTTGCACATGCGGATCTaGCGCATCAGCTTATATTTG +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRLHMRI*RISLYL
Trigger: CAAATATAAGCTGATGCGGCAGATCCGCATGTGCAA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGAGCTCCAGGTCAAAGTaGGACTCCACCCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQSSRSK*DSTRCF
Trigger: GAAGCAGCGGGTGGAGTCGCACTTTGACCTGGAGCT...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCAGGCTTCACTGAGGTaGTGCAGAATTGTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQQASLR*CRIVRA
Trigger: GGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTG...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAGGCCCAGGTTCTTTTTaGAAACAGTCTTGTCTACAG +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGGPGSF*KQSCLQ
Trigger: CTGTAGACAAGACTGTTTGCAAAAAGAACCTGGGCC...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGAAGACGGCGTTTATCTaGTTCATACCACAGGTACTG +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWKTAFI*FIPQVL
Trigger: CAGTACCTGTGGTATGAAGCAGATAAACGCCGTCTT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTATGAATGAGGCAAACTaGAGGCCTCTGATGATTCCA +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSMNEAN*RPLMIP
Trigger: TGGAATCATCAGAGGCCTGCAGTTTGCCTCATTCAT...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGATCCCGAGCCTCATCTaGTGTGAACCTGAAGAAAAT +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGIPSLI*CEPEEN
Trigger: ATTTTCTTCAGGTTCACAGCAGATGAGGCTCGGGAT...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGCTCTTGTCTCTTGAGTaGATACTCAGCCCAGACCCG +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWLLSLE*ILSPDP
Trigger: CGGGTCTGGGCTGAGTATGCACTCAAGAGACAAGAG...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGCCCTTGAAGAGAGTGTaGTCCAGAATGCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWPLKRV*SRMPST
Trigger: TGTGGAGGGCATTCTGGAGCACACTCTCTTCAAGGG...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGATACAACGCAGGGTTTaGCTTCATGATCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWIQRRV*LHDLGH
Trigger: ATGGCCAAGATCATGAAGGCAAACCCTGCGTTGTAT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAATACAACGCAGGGTTTaGCTTCATGATCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGIQRRV*LHDLGH
Trigger: ATGGCCAAGATCATGAAGGCAAACCCTGCGTTGTAT...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTTTGGTCATGTCTCCATaGTCTCGAATGATCTTCCTG +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSLVMSP*SRMIFL
Trigger: CAGGAAGATCATTCGAGACCATGGAGACATGACCAA...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGACTTCCCGACATAGATaGAAAGCATTCCCAAAACGG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGTSRHR*KAFPKR
Trigger: CCGTTTTGGGAATGCTTTCCATCTATGTCGGGAAGT...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGACTTCCCGACATAGATaGAAAGCATTCCCAAAACGG +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKTSRHR*KAFPKR
Trigger: CCGTTTTGGGAATGCTTTCCATCTATGTCGGGAAGT...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTCACCTGAGGTCAGACTaGGGGATAAGCACATGGCCC +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLHLRSD*GISTWP
Trigger: GGGCCATGTGCTTATCCCCCAGTCTGACCTCAGGTG...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTTCCAATACTTCTGTGTaGTGGTGCTGTCCATCACAT +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSSNTSV*WCCPSH
Trigger: ATGTGATGGACAGCACCACCACACAGAAGTATTGGA...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCTACTCATGTTGTCTGTaGTGTAATCCAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSYSCCL*CNPGTW
Trigger: CCAAGTTCCTGGATTACACCACAGACAACATGAGTA...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGCCCATACAGATGTGTaGATTATCTTGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSAHTDV*IILRNS
Trigger: GCTGTTCCTCAAGATAATCCACACATCTGTATGGGC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGGCCTGGAAGGGCAGCTaGAGCTCCGATCCTTTGATC +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQAWKGS*SSDPLI
Trigger: GATCAAAGGATCGGAGCTCCAGCTGCCCTTCCAGGC...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGAACAGTAGTCTTGTCTaGCTTCAGGATCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKNSSLV*LQDHLC
Trigger: GCAAAGGTGATCCTGAAGCCAGACAAGACTACTGTT...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGAGGAGATGGCTCCAGTaGTGTGGTACAGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQRRWLQ*CGTAQA
Trigger: TGCCTGTGCTGTACCACATCACTGGAGCCATCTCCT...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGCATCATGATCCACATTaGCCCCCACTGGGAGATGTA +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWHHDPH*PPLGDV
Trigger: TACATCTCCCAGTGGGGGTCAATGTGGATCATGATG...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTTGCCATCATGCCGCTaGTGTGTCCACCAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQLPSCR*CVHQKG
Trigger: CCCCTTTTGGTGGACACATCAGCGGCATGATGGCAA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGAAGGCATCTACATTaGCCAAGCGATACTGCACAT +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGGRHLH*PSDTAH
Trigger: ATGTGCAGTATCGCTTGGGCAATGTAGATGCCTTCC...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAATTTGTATCGATACATaGCTGTCAACTGTCCCACGT +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEICIDT*LSTVPR
Trigger: ACGTGGGACAGTTGACAGGCATGTATCGATACAAAT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTTGTGCTGCCGCTCCTaGTCTGCCTTCAGATACAGG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQLCCRS*SAFRYR
Trigger: CCTGTATCTGAAGGCAGAGCAGGAGCGGCAGCACAA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCTTCAAAACCTGGTACTaGTTAAAGTCAGTTCGGACA +
Preference number: 4 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSFKTWY*LKSVRT
Trigger: TGTCCGAACTGACTTTAAGCAGTACCAGGTTTTGAA...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATGTCTCAATTTCCAGTaGATCCAGTTCCTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGCLNFQ*IQFLVK
Trigger: TTTGACCAGGAACTGGATGCACTGGAAATTGAGACA...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAACAGCTGTAATCCTTTaGGTATCCGTTCACGTAACA +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSETAVIL*VSVHVT
Trigger: TGTTACGTGAACGGATACGCAAAGGATTACAGCTGT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGACAGCTGTAATCCTTTaGGTATCCGTTCACGTAACA +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWTAVIL*VSVHVT
Trigger: TGTTACGTGAACGGATACGCAAAGGATTACAGCTGT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCACGTTGTTTTTCTTaGCGTAGTCAGCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRSRCFS*RSQPRS
Trigger: TGATCTTGGCTGACTACGGCAAGAAAAACAACGTGA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGACCCATACAGGTATCCTaGAATTTGGGCACGAAGATC +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGPIQVS*NLGTKI
Trigger: GATCTTCGTGCCCAAATTGCAGGATACCTGTATGGG...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTGGTGCGTGCCCCACTaGGGCACCATCACAATACAA +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQWCVPH*GTITIQ
Trigger: TTGTATTGTGATGGTGCCGCAGTGGGGCACGCACCA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTATGGCTCCAGTGATGTaGTACAGCACAGGCACGTCC +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLMAPVM*YSTGTS
Trigger: GGACGTGCCTGTGCTGTACCACATCACTGGAGCCAT...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGCCAGCTCTAGCTGAATaGCTTCCAGTGGCTCAACAT +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWPALAE*LPVAQH
Trigger: ATGTTGAGCCACTGGAAGCCATTCAGCTAGAGCTGG...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTGGTACCAGGTCAGGTaGACGTGGTGTGGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQWYQVR*TWCGRL
Trigger: CAACCTTCCACACCACGTCCACCTGACCTGGTACCA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAATCAAAGTAGAAAGCTaGCAGATCAGGATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGIKVES*QIRILS
Trigger: ACTGAGGATCCTGATCTGCCAGCTTTCTACTTTGAT...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGATCAAAGTAGAAAGCTaGCAGATCAGGATCCTCAGT +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWIKVES*QIRILS
Trigger: ACTGAGGATCCTGATCTGCCAGCTTTCTACTTTGAT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAGTCAACTGTCCCACGTaGGCAAATATATACTGCAAA +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGVNCPT*ANIYCK
Trigger: TTTGCAGTATATATTTGCCCACGTGGGACAGTTGAC...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAATTCCACATCATACACTaGTACAAGGTGGCTATAGAG +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEFHIIH*YKVAIE
Trigger: CTCTATAGCCACCTTGTACCAGTGTATGATGTGGAA...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGCTTGTAAACAAGCAGTaGAGGTGGCTCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWLVNKQ*RWLCVS
Trigger: GCTGACACAGAGCCACCTCCACTGCTTGTTTACAAG...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTCAATGTTTTCATTGTTaGGGTCTGGGTGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRQCFHC*GLGVLS
Trigger: TGACAGAACACCCAGACCCCAACAATGAAAACATTG...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTCAATGTTTTCATTGTTaGGGTCTGGGTGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSQCFHC*GLGVLS
Trigger: TGACAGAACACCCAGACCCCAACAATGAAAACATTG...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTGGGGGATAAGCACATaGCCCATCGAGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLWGIST*PIESMP
Trigger: TGGCATGCTCTCGATGGGCCATGTGCTTATCCCCCA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAATGTAGCGGTACAAGTTaGGAATCAGTTGGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSECSGTS*ESVGLL
Trigger: AAGAAGACCAACTGATTCCCAACTTGTACCGCTACA...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGTCTCCCCAGCGTAATTaGATGTCAATCCAATACTTC +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKSPQRN*MSIQYF
Trigger: GAAGTATTGGATTGACATCCAATTACGCTGGGGAGA...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTACTCATGTTGTCTGTaGTGTAATCCAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRYSCCL*CNPGTW
Trigger: CCAAGTTCCTGGATTACACCACAGACAACATGAGTA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGAGGTATCCTGCAATTTaGGCACGAAGATCAGATATG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGRYPAI*ARRSDM
Trigger: CATATCTGATCTTCGTGCCCAAATTGCAGGATACCT...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGTTTCTCTACGCATCATaGTCCACATTGACCCCCACT +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWFLYAS*STLTPT
Trigger: AGTGGGGGTCAATGTGGATCATGATGCGTAGAGAAA...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTATGGGAGATTGGGTTaGTCAAAGGATCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRYGRLG*SKDQSR
Trigger: TCTACTTTGATCCTTTGATCAACCCAATCTCCCATA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAGCATCACAGCAGCCCTaGGCTCCAGGTCAAAGTGCG +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEASQQP*APGQSA
Trigger: CGCACTTTGACCTGGAGCTCAGGGCTGCTGTGATGC...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGAGTTCAATCCAATCTTaGTACGTGTCTGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWSSIQS*YVSGSC
Trigger: ACAAGATCCAGACACGTATCAAGATTGGATTGAACT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTCTGGAAGAGGGTATTaGTCCGGGGAATGCCTCGAT +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQSGRGY*SGECLD
Trigger: ATCGAGGCATTCCCCGGATCAATACCCTCTTCCAGA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGAGACATTGGCTCGATTaGTGGTTGGGGACCACCAGA +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQRHWLD*WLGTTR
Trigger: TCTGGTGGTCCCCAACCATCAATCGAGCCAATGTCT...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATCCTTGAGGTACTCATaGTGGGGCAGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAESLRYS*WGSWLG
Trigger: GCCCAGCCAGCTGCCCCAGCATGAGTACCTCAAGGA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCAGTCAGAAGCTGATTaGCCAGTCGGTAGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQQSEAD*PVGRVW
Trigger: CCACACTCTACCGACTGGCCAATCAGCTTCTGACTG...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGTGTCCACAACCAGCTTaGTTAAACGCAGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWCPQPA*LNAVLP
Trigger: GGGAAGTACTGCGTTTAACCAAGCTGGTTGTGGACA...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAAGTTATTTTCTCCAGTaGTTCCACATCATACACTGG +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGSYFLQ*FHIIHW
Trigger: CCAGTGTATGATGTGGAACCACTGGAGAAAATAACT...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGAGTTATTTTCTCCAGTaGTTCCACATCATACACTGG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGSYFLQ*FHIIHW
Trigger: CCAGTGTATGATGTGGAACCACTGGAGAAAATAACT...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGGTGTGCCGGTCTTTCTaGAAGAGGGTATTGATCCGG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQVCRSF*KRVLIR
Trigger: CCGGATCAATACCCTCTTCCAGAAAGACCGGCACAC...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAACCTCGTCAGTCAGCGTaGGCCAGATGTGGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEPRQSA*ARCGGV
Trigger: AACCCCACCACATCTGGCCCACGCTGACTGACGAGG...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGAAACATAAATATGATTaGTCCGCAGATGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGKHKYD*SADAGW
Trigger: CCAACCTGCATCTGCGGACCAATCATATTTATGTTT...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGAAACATAAATATGATTaGTCCGCAGATGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKKHKYD*SADAGW
Trigger: CCAACCTGCATCTGCGGACCAATCATATTTATGTTT...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGCTCGTATTTCATGTTaGGATCATGTCGAACACCCA +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGARISC*DHVEHP
Trigger: TGGGTGTTCGACATGATCCCAACATGAAATACGAGC...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAAGCGCCAGGCTTCACTaGGGTGCTGCAGAATTGTCC +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAESARLH*GAAELS
Trigger: GGACAATTCTGCAGCACCTCAGTGAAGCCTGGCGCT...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGTCTGATGATTCCATATaGGTTTGTATGGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGSDDSI*VCMVHV
Trigger: GACATGAACCATACAAACTCATATGGAATCATCAGA...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAACACGCAGGAAGCACTaGGCTGTCCGCTCCTTGGTA +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAETRRKH*AVRSLV
Trigger: TACCAAGGAGCGGACAGCTCAGTGCTTCCTGCGTGT...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGATGGAAGCGTTGCATTaGCTCATCATCCACACGCAG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQMEALH*LIIHTQ
Trigger: CTGCGTGTGGATGATGAGTCAATGCAACGCTTCCAT...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGGTCAAGCGTCTGTTCTaGGCAATAGCCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQVKRLF*AIASCL
Trigger: GAGACAAGAGGCTATTGCTCAGAACAGACGCTTGAC...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGCACAGTCTGGTGCGTaGCCCACTGCGGCACCATCA +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAAQSGA*PTAAPS
Trigger: TGATGGTGCCGCAGTGGGGCACGCACCAGACTGTGC...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTGTAGTGGGCAGTATTaGTCCACCAATCAGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQCSGQY*STNQPW
Trigger: CCAAGGCTGATTGGTGGACCAATACTGCCCACTACA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGATCTTGATACGTGTCTaGATCTTGTTTTCACACTTC +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWILIRV*ILFSHF
Trigger: GAAGTGTGAAAACAAGATCCAGACACGTATCAAGAT...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGTTCTGCTTCAAAACCTaGTACTGCTTAAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWFCFKT*YCLKSV
Trigger: AACTGACTTTAAGCAGTACCAGGTTTTGAAGCAGAA...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATTCTGCTTCAAAACCTaGTACTGCTTAAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGFCFKT*YCLKSV
Trigger: AACTGACTTTAAGCAGTACCAGGTTTTGAAGCAGAA...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTTACTCTATAGACATTaGTGTCATCCACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRLLYRH*CHPQTR
Trigger: TCTGGTTTGTGGATGACACCAATGTCTATAGAGTAA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGTTACTCTATAGACATTaGTGTCATCCACAAACCAGA +
Preference number: 4 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWLLYRH*CHPQTR
Trigger: TCTGGTTTGTGGATGACACCAATGTCTATAGAGTAA...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGCCGCTGCTGCGATaGCGCCGAGATCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGLPLLR*RRDLHS
Trigger: GGAATGGAGATCTCGGCGCCATCGCAGCAGCGGCAG...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAAGGTATCCTGCAATTTaGGCACGAAGATCAGATATG +
Preference number: 4 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGRYPAI*ARRSDM
Trigger: CATATCTGATCTTCGTGCCCAAATTGCAGGATACCT...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGCTCGTATTTCATGTTaGGATCATGTCGAACACCCA +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWARISC*DHVEHP
Trigger: TGGGTGTTCGACATGATCCCAACATGAAATACGAGC...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTAGCTTGAGGACTGCATaGGGCATGTACTTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLSLRTA*GMYLRA
Trigger: AGCTCTTAAGTACATGCCTCATGCAGTCCTCAAGCT...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTTCTTGGCTCTTGACTaGGTGTCTATGGGAGATTGG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQFLALD*VSMGDW
Trigger: CCAATCTCCCATAGACACTCAGTCAAGAGCCAAGAA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTTGAGGTTCTTCCGGTaGATGAGAAGGTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLLRFFR*MRRLSM
Trigger: CATGCTCAACCTTCTCATTCACCGGAAGAACCTCAA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAACTTTGCCACCCCCTTTaGGTGACGGCCTTCAAACTG +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAELCHPL*VTAFKL
Trigger: CAGTTTGAAGGCCGTCACTCAAAGGGGGTGGCAAAG...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTATCTTCTGCCACAAGTaGGCTCGGAATATCTGGATG +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLIFCHK*ARNIWM
Trigger: CATCCAGATATTCCGAGCTCACTTGTGGCAGAAGAT...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTCGAACCTTCACAGGCTaGCCAGCAGGACAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGARTFTG*PAGQCS
Trigger: GGAGCACTGTCCTGCTGGGCAGCCTGTGAAGGTTCG...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAACACCTGAGGGTTATCTaGAGGGCTCACCCCATACAG +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEHLRVI*RAHPIQ
Trigger: CTGTATGGGGTGAGCCCTCCAGATAACCCTCAGGTG...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTGGGAGGCCGGTGCTTaGGGGCATTCAGCACATAGT +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGWEAGA*GHSAHS
Trigger: ACTATGTGCTGAATGCCCTCAAGCACCGGCCTCCCA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTCCAGCTTGGTGGACTaGAAGAATTTGGTAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQSSLVD*KNLVAL
Trigger: CAAAGCTACCAAATTCTTTCAGTCCACCAAGCTGGA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAAAGTCATTTGGCATCTaGGGAGGCCCAGCCATCTCA +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEKSFGI*GGPAIS
Trigger: TGAGATGGCTGGGCCTCCTCAGATGCCAAATGACTT...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGAGTTCAATCCAATCTTaGTACGTGTCTGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWSSIQS*YVSGSC
Trigger: ACAAGATCCAGACACGTATCAAGATTGGATTGAACT...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCCAGATCAATGGCAATaGGCACGCCTGTGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGPDQWQ*ARLWAK
Trigger: CTTCGCCCACAGGCGTGCTCATTGCCATTGATCTGG...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAGGGGATTCATTGGGCTaGGTGTGGATCCAACCTAAG +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEGDSLG*VWIQPK
Trigger: CTTAGGTTGGATCCACACTCAGCCCAATGAATCCCC...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTGGGCAAATATATACTaGAAACCATCTGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLWANIY*KPSASW
Trigger: CCAGCTGGCAGATGGTTTGCAGTATATATTTGCCCA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATCAAGTCCTTGCACATaGGGATCTGCCGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAESSPCT*GSAASA
Trigger: AGCTGATGCGGCAGATCCGCATGTGCAAGGACTTGA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGAAGACGGCGTTTATCTaGTTCATACCACAGGTACTG +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQKTAFI*FIPQVL
Trigger: CAGTACCTGTGGTATGAAGCAGATAAACGCCGTCTT...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCACCTGAGGTCAGACTaGGGGATAAGCACATGGCCC +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGHLRSD*GISTWP
Trigger: GGGCCATGTGCTTATCCCCCAGTCTGACCTCAGGTG...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAGTGTGCCGGTCTTTCTaGAAGAGGGTATTGATCCGG +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEVCRSF*KRVLIR
Trigger: CCGGATCAATACCCTCTTCCAGAAAGACCGGCACAC...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAGGCTCGATTGATGGTTaGGGACCACCAGAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEGSIDG*GPPEGK
Trigger: TTTACCCTCTGGTGGTCCCCAACCATCAATCGAGCC...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGCCCATACAGATGTGTaGATTATCTTGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLAHTDV*IILRNS
Trigger: GCTGTTCCTCAAGATAATCCACACATCTGTATGGGC...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGGCCTGGAAGGGCAGCTaGAGCTCCGATCCTTTGATC +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGAWKGS*SSDPLI
Trigger: GATCAAAGGATCGGAGCTCCAGCTGCCCTTCCAGGC...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTTGCCATCATGCCGCTaGTGTGTCCACCAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGLPSCR*CVHQKG
Trigger: CCCCTTTTGGTGGACACATCAGCGGCATGATGGCAA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTCAGGGTTTGCCTTCATaGTCTTGGCCATGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAQGLPS*SWPWPA
Trigger: AGCAGGCCATGGCCAAGATCATGAAGGCAAACCCTG...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTAGGGTTCCATCTCCTTaGGGTACTCATGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGARVPSP*GTHAGA
Trigger: TGCCCCAGCATGAGTACCTCAAGGAGATGGAACCCT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATTGGCCTGCAACTGCTaGCATTTTCGAGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAELACNC*HFRAFS
Trigger: GGAGAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGGGTATACACGGCCACTaGCTCCTCGGCTGTGATGTA +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGGIHGH*LLGCDV
Trigger: TACATCACAGCCGAGGAGGCAGTGGCCGTGTATACC...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTGTCTCAATTTCCAGTaGATCCAGTTCCTGGTCAAA +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLCLNFQ*IQFLVK
Trigger: TTTGACCAGGAACTGGATGCACTGGAAATTGAGACA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTCACGTTGTTTTTCTTaGCGTAGTCAGCCAAGATCA +
Preference number: 4 (lower is better)
Translates to: STTQAQNAKGLTAECQQLSRCFS*RSQPRS
Trigger: TGATCTTGGCTGACTACGGCAAGAAAAACAACGTGA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTTCAATCTCAGCTATCTaGTGCCGCTGCTGCGATGGC +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGASISAI*CRCCDG
Trigger: GCCATCGCAGCAGCGGCAGCAGATAGCTGAGATTGA...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAACTTGTAAACAAGCAGTaGAGGTGGCTCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAELVNKQ*RWLCVS
Trigger: GCTGACACAGAGCCACCTCCACTGCTTGTTTACAAG...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTGTAGCGGTACAAGTTaGGAATCAGTTGGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQCSGTS*ESVGLL
Trigger: AAGAAGACCAACTGATTCCCAACTTGTACCGCTACA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAGGCATGTCTTCCTTCTaGGCATCCACAAACCCAAAT +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEGMSSF*ASTNPN
Trigger: ATTTGGGTTTGTGGATGCTCAGAAGGAAGACATGCC...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTCCCGATACCAGTTCTTaGCAAGGGGTATGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAPDTSS*QGVCPR
Trigger: CCTTGGACATACCCCTTGTCAAGAACTGGTATCGGG...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATTGAGGTTCTTCCGGTaGATGAGAAGGTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAELRFFR*MRRLSM
Trigger: CATGCTCAACCTTCTCATTCACCGGAAGAACCTCAA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATTCATGACTCATTCCTaGACGGAAGTGTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEFMTHS*TEVCDA
Trigger: GGCATCACACACTTCCGTTCAGGAATGAGTCATGAA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTAGACATTGGCTCGATTaGTGGTTGGGGACCACCAGA +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGARHWLD*WLGTTR
Trigger: TCTGGTGGTCCCCAACCATCAATCGAGCCAATGTCT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGGATCTTGCCGTGCATaGAGATTCCTGTCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAGSCRA*RFLSGP
Trigger: TGGACCTGACAGGAATCTTCATGCACGGCAAGATCC...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAATCTTCTGCCACAAGTaGGCTCGGAATATCTGGATG +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEIFCHK*ARNIWM
Trigger: CATCCAGATATTCCGAGCTCACTTGTGGCAGAAGAT...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCAGCAGAGATGGCCCTaGCTCTCCATTCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGQQRWP*LSIQSL
Trigger: CAAAGACTGAATGGAGAGTCAGGGCCATCTCTGCTG...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTTGCCCAAGCGATACTaGACATGGCTGTCCACAACC +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGLPKRY*TWLSTT
Trigger: GGTTGTGGACAGCCATGTGCAGTATCGCTTGGGCAA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTTCAAGTCCTTGCACATaGGGATCTGCCGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGASSPCT*GSAASA
Trigger: AGCTGATGCGGCAGATCCGCATGTGCAAGGACTTGA...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGATGCCCACATCTGTCTaGTTGGACCACCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGMPTSV*LDHLRS
Trigger: TGACCTCAGGTGGTCCAAGCAGACAGATGTGGGCAT...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTATGCCCACATCTGTCTaGTTGGACCACCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAMPTSV*LDHLRS
Trigger: TGACCTCAGGTGGTCCAAGCAGACAGATGTGGGCAT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCCCTTGAAGAGAGTGTaGTCCAGAATGCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGPLKRV*SRMPST
Trigger: TGTGGAGGGCATTCTGGAGCACACTCTCTTCAAGGG...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAACAAGTCCATCACGATaGTCTCATGGATCTTCTGCC +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAETSPSR*SHGSSA
Trigger: GGCAGAAGATCCATGAGAGCATCGTGATGGACTTGT...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTATCTTGGCCATGGCCTaGTGTATGAGAGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAILAMA*CMRGLL
Trigger: CAGCAAGCCTCTCATACAGCAGGCCATGGCCAAGAT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATTGGGGTTTGCCAGCTaGAGCTCGTATTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAELGFAS*SSYFML
Trigger: CAACATGAAATACGAGCTGCAGCTGGCAAACCCCAA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAACTTCCTGACATGTTCTaGTGGCATGTCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAELPDMF*WHVFLL
Trigger: CAGAAGGAAGACATGCCACCAGAACATGTCAGGAAG...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCAAGAGGCTCAAATTTaGGTCCCCCAGGAATGGCCA +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGQEAQI*VPQEWP
Trigger: TGGCCATTCCTGGGGGACCCAAATTTGAGCCTCTTG...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAGCAGGGCAATGCCATTaGCTGTGTTGTCTGTATAGA +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEAGQCH*LCCLYR
Trigger: TCTATACAGACAACACAGCCAATGGCATTGCCCTGC...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCCACAACCAGCTTaGTTAAACGCAGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAECPQPA*LNAVLP
Trigger: GGGAAGTACTGCGTTTAACCAAGCTGGTTGTGGACA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGGGCTCGATTGATGGTTaGGGACCACCAGAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGGSIDG*GPPEGK
Trigger: TTTACCCTCTGGTGGTCCCCAACCATCAATCGAGCC...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTGTAATCCAGGAACTTaGCCCGGGCATAGCGCTCAA +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGCNPGT*PGHSAQ
Trigger: TTGAGCGCTATGCCCGGGCCAAGTTCCTGGATTACA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTTTGGCCTGCAACTGCTaGCATTTTCGAGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGALACNC*HFRAFS
Trigger: GGAGAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAA...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAACGGTTATGGAAGCGTTaGATTGACTCATCATCCACA +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAERLWKR*IDSSST
Trigger: TGTGGATGATGAGTCAATGCAACGCTTCCATAACCG...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGACTTCTGTGTGGTGGTaGTGTCCATCACATCCTTGG +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGTSVWW*CPSHPW
Trigger: CCAAGGATGTGATGGACAGCACCACCACACAGAAGT...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTAGCCTTTGGGGTTGTTaGCTTTGTCTGTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGASLWGC*LCLCSA
Trigger: GGCAGAACACAGACAAAGGCAACAACCCCAAAGGCT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTCCAGCTCTAGCTGAATaGCTTCCAGTGGCTCAACAT +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAPALAE*LPVAQH
Trigger: ATGTTGAGCCACTGGAAGCCATTCAGCTAGAGCTGG...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGAGGCTTGATCCAGGGTaGGAAAAGACGGCGTTTATC +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGRLDPG*EKTAFI
Trigger: GATAAACGCCGTCTTTTCCCACCCTGGATCAAGCCT...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTACTCCTCAAAGCCACTaGCTTTCTCCCAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGATPQSH*LSPRTD
Trigger: GTCTGTTCTGGGAGAAAGCCAGTGGCTTTGAGGAGT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATCCAATACTTCTGTGTaGTGGTGCTGTCCATCACAT +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAESNTSV*WCCPSH
Trigger: ATGTGATGGACAGCACCACCACACAGAAGTATTGGA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAAACAGTAGTCTTGTCTaGCTTCAGGATCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAENSSLV*LQDHLC
Trigger: GCAAAGGTGATCCTGAAGCCAGACAAGACTACTGTT...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTCATGGTAGAATTCCTTaGGGTTTGCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAHGRIP*GLPAAA
Trigger: AGCTGCAGCTGGCAAACCCCAAGGAATTCTACCATG...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTTTTCTCTACGCATCATaGTCCACATTGACCCCCACT +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAFLYAS*STLTPT
Trigger: AGTGGGGGTCAATGTGGATCATGATGCGTAGAGAAA...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGAGTCATCATAGAGGTTaGAAAGGACCATCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGSHHRG*KGPSGA
Trigger: AGCCCCAGATGGTCCTTTTCAACCTCTATGATGACT...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTAGTCATCATAGAGGTTaGAAAGGACCATCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGASHHRG*KGPSGA
Trigger: AGCCCCAGATGGTCCTTTTCAACCTCTATGATGACT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGGAAGGCATCTACATTaGCCAAGCGATACTGCACAT +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAGRHLH*PSDTAH
Trigger: ATGTGCAGTATCGCTTGGGCAATGTAGATGCCTTCC...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTTCCTGACATGTTCTaGTGGCATGTCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGLPDMF*WHVFLL
Trigger: CAGAAGGAAGACATGCCACCAGAACATGTCAGGAAG...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATTCCACATCATACACTaGTACAAGGTGGCTATAGAG +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEFHIIH*YKVAIE
Trigger: CTCTATAGCCACCTTGTACCAGTGTATGATGTGGAA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATCTCCCCAGCGTAATTaGATGTCAATCCAATACTTC +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAESPQRN*MSIQYF
Trigger: GAAGTATTGGATTGACATCCAATTACGCTGGGGAGA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTACAGGTAAGGCTCAGTaGGCTCAGATGAATACAGCT +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGATGKAQ*AQMNTA
Trigger: AGCTGTATTCATCTGAGCCCACTGAGCCTTACCTGT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGGCTGGGACTGTTCCTTaGTCTGCTTTTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGAGTVP*SAFQSQ
Trigger: CTGAGATTGAAAAGCAGACCAAGGAACAGTCCCAGC...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTCTCCCCATCCCAAGATaGGTTGTCAGCCATGATTTT +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGALPIPR*VVSHDF
Trigger: AAAATCATGGCTGACAACCCATCTTGGGATGGGGAG...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGGGAGCTCCGATCCTTTaGTCACAATATTGGGGAAAT +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGGAPIL*SQYWGN
Trigger: ATTTCCCCAATATTGTGATCAAAGGATCGGAGCTCC...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATTGACTGAGTGTCTATaGGAGATTGGGTTGATCAAA +
Preference number: 4 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAELTECL*EIGLIK
Trigger: TTTGATCAACCCAATCTCCCATAGACACTCAGTCAA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTATTTGTATCGATACATaGCTGTCAACTGTCCCACGT +
Preference number: 4 (lower is better)
Translates to: FCSGLQSINNTSTERKGAICIDT*LSTVPR
Trigger: ACGTGGGACAGTTGACAGGCATGTATCGATACAAAT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGGTCAACTGTCCCACGTaGGCAAATATATACTGCAAA +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGVNCPT*ANIYCK
Trigger: TTTGCAGTATATATTTGCCCACGTGGGACAGTTGAC...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTATGGGAGATTGGGTTaGTCAAAGGATCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGYGRLG*SKDQSR
Trigger: TCTACTTTGATCCTTTGATCAACCCAATCTCCCATA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR GCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTTCAAAACCTGGTACTaGTTAAAGTCAGTTCGGACA +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGFKTWY*LKSVRT
Trigger: TGTCCGAACTGACTTTAAGCAGTACCAGGTTTTGAA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR TCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTCTGATGATTCCATATaGGTTTGTATGGTTCATGTC +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGSDDSI*VCMVHV
Trigger: GACATGAACCATACAAACTCATATGGAATCATCAGA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CCA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGATCTTGATACGTGTCTaGATCTTGTTTTCACACTTC +
Preference number: 4 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGILIRV*ILFSHF
Trigger: GAAGTGTGAAAACAAGATCCAGACACGTATCAAGAT...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp AGTGGAGGGAAGGGGATGGGCGAGAATCTCCGGCTCTCCAGCCAGTaGACAGTGGTGGTATACACGGCCACTGCCTCCTCGGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: SGGKGMGENLRLSSQ*TVVVYTATASSAVM
Trigger: CATCACAGCCGAGGAGGCAGTGGCCGTGTATACCACCACTGTGCACTGGCTGGAGAGCCGGAGATTCTCGCCCATCCCCTTCCCTCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS-3UTR CAA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCGACCAGAGCGTAGGTaGAAGGGCCGTGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWRPERR*KGRGAQ
Trigger: CTGGGCACCACGGCCCTTCAACCTACGCTCTGGTCG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAACGACCAGAGCGTAGGTaGAAGGGCCGTGGTGCCCAG +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSERPERR*KGRGAQ
Trigger: CTGGGCACCACGGCCCTTCAACCTACGCTCTGGTCG...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp TTGAGGTACTCATGCTGGGGCAGCTGGCTGGGCAGGTGCACAGTCTaGTGCGTGCCCCACTGCGGCACCATCACAATACAACGGATCTCC +
Preference number: 5 (lower is better)
Translates to: LRYSCWGSWLGRCTV*CVPHCGTITIQRIS
Trigger: GGAGATCCGTTGTATTGTGATGGTGCCGCAGTGGGGCACGCACCAGACTGTGCACCTGCCCAGCCAGCTGCCCCAGCATGAGTACCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGTCCGCAGATGCAGGTaGGCAGCAGAGATGGCCCTG +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEVRRCR*AAEMAL
Trigger: CAGGGCCATCTCTGCTGCCAACCTGCATCTGCGGAC...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp TCCATCTCCTTGAGGTACTCATGCTGGGGCAGCTGGCTGGGCAGGTaGACAGTCTGGTGCGTGCCCCACTGCGGCACCATCACAATACAA +
Preference number: 5 (lower is better)
Translates to: SISLRYSCWGSWLGR*TVWCVPHCGTITIQ
Trigger: TTGTATTGTGATGGTGCCGCAGTGGGGCACGCACCAGACTGTGCACCTGCCCAGCCAGCTGCCCCAGCATGAGTACCTCAAGGAGATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp TCTGTCTGCTTGGACCACCTGAGGTCAGACTGGGGGATAAGCACATaGCCCATCGAGAGCATGCCAAGCCCACCCAGCTCCTTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: SVCLDHLRSDWGIST*PIESMPSPPSSLGV
Trigger: CACCCCTAAGGAGCTGGGTGGGCTTGGCATGCTCTCGATGGGCCATGTGCTTATCCCCCAGTCTGACCTCAGGTGGTCCAAGCAGACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGACTCCAGCATGACGTaGCACTCGCCCTCACTCGTC +
Preference number: 5 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSDSSMT*HSPSLV
Trigger: GACGAGTGAGGGCGAGTGCAACGTCATGCTGGAGTC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGGACTCCAGCATGACGTaGCACTCGCCCTCACTCGTC +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKDSSMT*HSPSLV
Trigger: GACGAGTGAGGGCGAGTGCAACGTCATGCTGGAGTC...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAATGCAGAAGGGCGAAGTaGAGGAAGTGGGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSECRRAK*RKWEGL
Trigger: CAGGCCCTCCCACTTCCTCAACTTCGCCCTTCTGCA...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 90 bp CTTTCTCCCAGAACAGACCCTCCCAGGTGGGGAAGTAAGTGCCCTTaGAGAGAGTGTGCTCCAGAATGCCCTCCACACCACCCAGCGCCT +
Preference number: 5 (lower is better)
Translates to: LSPRTDPPRWGSKCP*RECAPECPPHHPAP
Trigger: AGGCGCTGGGTGGTGTGGAGGGCATTCTGGAGCACACTCTCTTCAAGGGCACTTACTTCCCCACCTGGGAGGGTCTGTTCTGGGAGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCTACAGAAGAGTCGGATaGGGTGTGCAGCCTCAGTGG +
Preference number: 5 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSYRRVG*GVQPQW
Trigger: CCACTGAGGCTGCACACCCAATCCGACTCTTCTGTA...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCGTGGCAGCCGGTTTTaGATGTCCCAGAACACTGCC +
Preference number: 5 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWRGSRF*MSQNTA
Trigger: GGCAGTGTTCTGGGACATCAAAAACCGGCTGCCACG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAACCCACATCTGTCTGCTaGGACCACCTGAGGTCAGAC +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEPTSVC*DHLRSD
Trigger: GTCTGACCTCAGGTGGTCCAAGCAGACAGATGTGGG...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTCTGTCCATCACATCCTaGGAGTCTGCCAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSLSITS*ESASSE
Trigger: CTCGCTGCTGGCAGACTCCAAGGATGTGATGGACAG...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAATTGGGGTTGTTGCCTTaGTCTGTGTTCTGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSELGLLP*SVFCRP
Trigger: GGGCCGGCAGAACACAGACAAAGGCAACAACCCCAA...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp GAGATGGCTCCAGTGATGTGGTACAGCACAGGCACGTCCCGGATCTaGTCCCAAGGCATGGGCATGTTCTCAAGGAGCTTGAGGACTGCA +
Preference number: 5 (lower is better)
Translates to: EMAPVMWYSTGTSRI*SQGMGMFSRSLRTA
Trigger: TGCAGTCCTCAAGCTCCTTGAGAACATGCCCATGCCTTGGGAGCAGATCCGGGACGTGCCTGTGCTGTACCACATCACTGGAGCCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp CAAGGGATGTTGGCCTTCCAGCAGCGCCAGGCTTCACTGAGGTGCTaGAGAATTGTCCGGGCCTTGTTCTGCTTGATGCCTTCAGGCATC +
Preference number: 5 (lower is better)
Translates to: QGMLAFQQRQASLRC*RIVRALFCLMPSGI
Trigger: GATGCCTGAAGGCATCAAGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTGGCGCTGCTGGAAGGCCAACATCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 90 bp TTCCAAGGGATGTTGGCCTTCCAGCAGCGCCAGGCTTCACTGAGGTaGTGCAGAATTGTCCGGGCCTTGTTCTGCTTGATGCCTTCAGGC +
Preference number: 5 (lower is better)
Translates to: FQGMLAFQQRQASLR*CRIVRALFCLMPSG
Trigger: GCCTGAAGGCATCAAGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTGGCGCTGCTGGAAGGCCAACATCCCTTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 90 bp TCTGAACCCTCTCGTAGTGCGAGGGTAGGTAGCCTTTGGGGTTGTTaGCTTTGTCTGTGTTCTGCCGGCCCCACTCATACCCACTGGGTG +
Preference number: 5 (lower is better)
Translates to: SEPSRSARVGSLWGC*LCLCSAGPTHTHWV
Trigger: CACCCAGTGGGTATGAGTGGGGCCGGCAGAACACAGACAAAGGCAACAACCCCAAAGGCTACCTACCCTCGCACTACGAGAGGGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAACAAGAGGCTCAAATTaGGGTCCCCCAGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSETRGSN*GPPGMA
Trigger: GGCCATTCCTGGGGGACCCAAATTTGAGCCTCTTGT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAACCTTCCAAGGGATGTaGGCCTTCCAGCAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGTFQGM*AFQQRQ
Trigger: CTGGCGCTGCTGGAAGGCCAACATCCCTTGGAAGGT...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTGCTGTATGAGAGGCTaGCTGCCCGGGAACCAGTTT +
Preference number: 5 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRCCMRG*LPGNQF
Trigger: AAACTGGTTCCCGGGCAGCAAGCCTCTCATACAGCA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTCCAAACTTCTCCACCTaGAGACAAGCCTGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSPNFST*RQAWKG
Trigger: GCCCTTCCAGGCTTGTCTCAAGGTGGAGAAGTTTGG...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCCAAACTTCTCCACCTaGAGACAAGCCTGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKPNFST*RQAWKG
Trigger: GCCCTTCCAGGCTTGTCTCAAGGTGGAGAAGTTTGG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAAAGGGTTCCATCTCCTaGAGGTACTCATGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEKGSIS*RYSCWG
Trigger: GCCCCAGCATGAGTACCTCAAGGAGATGGAACCCTT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 90 bp TGCCTTCAGGCATCATGTCCAGAATGTCGTGCATCACAGCAGCCCTaGGCTCCAGGTCAAAGTGCGACTCCACCCGCTGCTTCGTTACTG +
Preference number: 5 (lower is better)
Translates to: CLQASCPECRASQQP*APGQSATPPAASLL
Trigger: CAGTAACGAAGCAGCGGGTGGAGTCGCACTTTGACCTGGAGCTCAGGGCTGCTGTGATGCACGACATTCTGGACATGATGCCTGAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS TCA 90 bp CTCTGTCTGCAGAGTAGACCTCACCCTCCTGCAGAAGGGCGAAGTTaGGGAAGTGGGAGGGCCTGTGGACCTCATGGTAGAATTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LCLQSRPHPPAEGRS*GSGRACGPHGRIPW
Trigger: CCAAGGAATTCTACCATGAGGTCCACAGGCCCTCCCACTTCCTCAACTTCGCCCTTCTGCAGGAGGGTGAGGTCTACTCTGCAGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp TCCAGAATGTCGTGCATCACAGCAGCCCTGAGCTCCAGGTCAAAGTaGGACTCCACCCGCTGCTTCGTTACTGTCTTTGCCACCCCCTTT +
Preference number: 5 (lower is better)
Translates to: SRMSCITAALSSRSK*DSTRCFVTVFATPF
Trigger: AAAGGGGGTGGCAAAGACAGTAACGAAGCAGCGGGTGGAGTCGCACTTTGACCTGGAGCTCAGGGCTGCTGTGATGCACGACATTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 90 bp CTCCCCAGCGTAATTGGATGTCAATCCAATACTTCTGTGTGGTGGTaGTGTCCATCACATCCTTGGAGTCTGCCAGCAGCGAGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: LPSVIGCQSNTSVWW*CPSHPWSLPAARAG
Trigger: CCCGGCCCTCGCTGCTGGCAGACTCCAAGGATGTGATGGACAGCACCACCACACAGAAGTATTGGATTGACATCCAATTACGCTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp ACAGGAGCATCTGAACCCTCTCGTAGTGCGAGGGTAGGTAGCCTTTaGGGTTGTTGCCTTTGTCTGTGTTCTGCCGGCCCCACTCATACC +
Preference number: 5 (lower is better)
Translates to: TGASEPSRSARVGSL*GCCLCLCSAGPTHT
Trigger: GGTATGAGTGGGGCCGGCAGAACACAGACAAAGGCAACAACCCCAAAGGCTACCTACCCTCGCACTACGAGAGGGTTCAGATGCTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCGGGAAACGCATCCTCTaGAAATGCCTCCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSGKRIL*KCLLSL
Trigger: AAGAGACAGGAGGCATTTCAAGAGGATGCGTTTCCC...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTTGGTGGTGAGCGTCTaGACAGGCTTCAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRLVVSV*TGFRLK
Trigger: CTTCAACCTGAAGCCTGTCAAGACGCTCACCACCAA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTTTGGTGGTGAGCGTCTaGACAGGCTTCAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSLVVSV*TGFRLK
Trigger: CTTCAACCTGAAGCCTGTCAAGACGCTCACCACCAA...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAATCTTTGCCACCCCCTTaGAGTGACGGCCTTCAAACT +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSESLPPP*SDGLQT
Trigger: AGTTTGAAGGCCGTCACTCAAAGGGGGTGGCAAAGA...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGCTTCGTTACTGTCTTaGCCACCCCCTTTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSASLLS*PPPLSD
Trigger: GTCACTCAAAGGGGGTGGCAAAGACAGTAACGAAGC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGGCTTCGTTACTGTCTTaGCCACCCCCTTTGAGTGAC +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKASLLS*PPPLSD
Trigger: GTCACTCAAAGGGGGTGGCAAAGACAGTAACGAAGC...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGGTCCACCAATCAGCCTaGGCCTTAACGTACCGAAGA +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKVHQSA*ALTYRR
Trigger: TCTTCGGTACGTTAAGGCCAAGGCTGATTGGTGGAC...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGTCCACCAATCAGCCTaGGCCTTAACGTACCGAAGA +
Preference number: 5 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSVHQSA*ALTYRR
Trigger: TCTTCGGTACGTTAAGGCCAAGGCTGATTGGTGGAC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAATCTGTGTCAGCAGGCTaGATCCAGGGTGGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSESVSAG*IQGGKR
Trigger: TCTTTTCCCACCCTGGATCAAGCCTGCTGACACAGA...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGTCTGTGTCAGCAGGCTaGATCCAGGGTGGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGSVSAG*IQGGKR
Trigger: TCTTTTCCCACCCTGGATCAAGCCTGCTGACACAGA...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGACGTGGCAGCCGGTTTTaGATGTCCCAGAACACTGCC +
Preference number: 5 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGRGSRF*MSQNTA
Trigger: GGCAGTGTTCTGGGACATCAAAAACCGGCTGCCACG...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGTTCTGGAAGAGGGTATaGATCCGGGGAATGCCTCGA +
Preference number: 5 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGFWKRV*IRGMPR
Trigger: TCGAGGCATTCCCCGGATCAATACCCTCTTCCAGAA...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTTCTGGAAGAGGGTATaGATCCGGGGAATGCCTCGA +
Preference number: 5 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRFWKRV*IRGMPR
Trigger: TCGAGGCATTCCCCGGATCAATACCCTCTTCCAGAA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCTTTGCCTTCATGATCTaGGCCATGGCCTGCTGTATG +
Preference number: 5 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSFAFMI*AMACCM
Trigger: CATACAGCAGGCCATGGCCAAGATCATGAAGGCAAA...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGGCCAAGATCAGATCCTaGAGCTGTACCTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGAKIRS*SCTSTL
Trigger: CAAGGTGGAGGTACAGCTCAAGGATCTGATCTTGGC...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCCCATCCCAAGATGGGTaGTCAGCCATGATTTTGGCA +
Preference number: 5 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSPSQDG*SAMILA
Trigger: TGCCAAAATCATGGCTGACAACCCATCTTGGGATGG...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGAATTCCTTGGGGTTaGCCAGCTGCAGCTCGTATT +
Preference number: 5 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSRIPWG*PAAARI
Trigger: AATACGAGCTGCAGCTGGCAAACCCCAAGGAATTCT...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp GCCTTGTTCTGCTTGATGCCTTCAGGCATCATGTCCAGAATGTCGTaGATCACAGCAGCCCTGAGCTCCAGGTCAAAGTGCGACTCCACC +
Preference number: 5 (lower is better)
Translates to: ALFCLMPSGIMSRMS*ITAALSSRSKCDST
Trigger: GGTGGAGTCGCACTTTGACCTGGAGCTCAGGGCTGCTGTGATGCACGACATTCTGGACATGATGCCTGAAGGCATCAAGCAGAACAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 90 bp GATGTAAGGCCCATCCTTCAGGTAATTGTGCTGCCGCTCCTGCTCTaGCTTCAGATACAGGCGAGTGAGGCGGCCCAGGTTCTTTTTGCA +
Preference number: 5 (lower is better)
Translates to: DVRPILQVIVLPLLL*LQIQASEAAQVLFA
Trigger: TGCAAAAAGAACCTGGGCCGCCTCACTCGCCTGTATCTGAAGGCAGAGCAGGAGCGGCAGCACAATTACCTGAAGGATGGGCCTTACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 90 bp TGTAGTCACCGATCGTGGCAGCCGGTTTTTGATGTCCCAGAACACTaGCCGACCCAAGTTGACATCATGCTTCATGAGCCGCATTCGGGC +
Preference number: 5 (lower is better)
Translates to: CSHRSWQPVFDVPEH*PTQVDIMLHEPHSG
Trigger: GCCCGAATGCGGCTCATGAAGCATGATGTCAACTTGGGTCGGGCAGTGTTCTGGGACATCAAAAACCGGCTGCCACGATCGGTGACTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp ACAGTTCGAGTCTGTGTAGCAGTGAGCTGGGACTGTTCCTTGGTCTaGTTTTCAATCTCAGCTATCTGCTGCCGCTGCTGCGATGGCGCC +
Preference number: 5 (lower is better)
Translates to: TVRVCVAVSWDCSLV*FSISAICCRCCDGA
Trigger: GGCGCCATCGCAGCAGCGGCAGCAGATAGCTGAGATTGAAAAGCAGACCAAGGAACAGTCCCAGCTCACTGCTACACAGACTCGAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp ATAACCCAGGGAATCTCGTTAACAAAGGAGATGGCTCCAGTGATGTaGTACAGCACAGGCACGTCCCGGATCTGCTCCCAAGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: ITQGISLTKEMAPVM*YSTGTSRICSQGMG
Trigger: GCCCATGCCTTGGGAGCAGATCCGGGACGTGCCTGTGCTGTACCACATCACTGGAGCCATCTCCTTTGTTAACGAGATTCCCTGGGTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp ACCTCCACCTTGATCCATTCCTCGTCAGTCAGCGTGGGCCAGATGTaGTGGGGTTCCGTAACAGTAGTCTTGTCTGGCTTCAGGATCACC +
Preference number: 5 (lower is better)
Translates to: TSTLIHSSSVSVGQM*WGSVTVVLSGFRIT
Trigger: GGTGATCCTGAAGCCAGACAAGACTACTGTTACGGAACCCCACCACATCTGGCCCACGCTGACTGACGAGGAATGGATCAAGGTGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGGGGAAACGCATCCTCTaGAAATGCCTCCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKGKRIL*KCLLSL
Trigger: AAGAGACAGGAGGCATTTCAAGAGGATGCGTTTCCC...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGTCCCGATACCAGTTCTaGACAAGGGGTATGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKSRYQF*TRGMSK
Trigger: CTTGGACATACCCCTTGTCAAGAACTGGTATCGGGA...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGAGAATTGTCCGGGCCTaGTTCTGCTTGATGCCTTCA +
Preference number: 5 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGRIVRA*FCLMPS
Trigger: TGAAGGCATCAAGCAGAACAAGGCCCGGACAATTCT...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATTCAGTGTGGGGATCTaGCCGTGCATGAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGFSVGI*PCMKIP
Trigger: AGGAATCTTCATGCACGGCAAGATCCCCACACTGAA...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGTTCAGTGTGGGGATCTaGCCGTGCATGAAGATTCCT +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKFSVGI*PCMKIP
Trigger: AGGAATCTTCATGCACGGCAAGATCCCCACACTGAA...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCGTCACCGTGCTTGTaGACAGTTCGAGTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRSSPCL*TVRVCV
Trigger: TACACAGACTCGAACTGTCAACAAGCACGGTGACGA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCCATCCCAAGATGGGTaGTCAGCCATGATTTTGGCA +
Preference number: 5 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGPSQDG*SAMILA
Trigger: TGCCAAAATCATGGCTGACAACCCATCTTGGGATGG...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 90 bp AGAGGCCATCAGAATCTGCCGCACACGGTTATGGAAGCGTTGCATTaGCTCATCATCCACACGCAGGAAGCACTGAGCTGTCCGCTCCTT +
Preference number: 5 (lower is better)
Translates to: RGHQNLPHTVMEALH*LIIHTQEALSCPLL
Trigger: AAGGAGCGGACAGCTCAGTGCTTCCTGCGTGTGGATGATGAGTCAATGCAACGCTTCCATAACCGTGTGCGGCAGATTCTGATGGCCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp CGCCAGGCTTCACTGAGGTGCTGCAGAATTGTCCGGGCCTTGTTCTaGTTGATGCCTTCAGGCATCATGTCCAGAATGTCGTGCATCACA +
Preference number: 5 (lower is better)
Translates to: RQASLRCCRIVRALF*LMPSGIMSRMSCIT
Trigger: TGTGATGCACGACATTCTGGACATGATGCCTGAAGGCATCAAGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 90 bp GACTGTTCCTTGGTCTGCTTTTCAATCTCAGCTATCTGCTGCCGCTaGTGCGATGGCGCCGAGATCTCCATTCCCAGGATGATGTCTCGA +
Preference number: 5 (lower is better)
Translates to: DCSLVCFSISAICCR*CDGAEISIPRMMSR
Trigger: TCGAGACATCATCCTGGGAATGGAGATCTCGGCGCCATCGCAGCAGCGGCAGCAGATAGCTGAGATTGAAAAGCAGACCAAGGAACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp AGTCTCCCCAGCGTAATTGGATGTCAATCCAATACTTCTGTGTGGTaGTGCTGTCCATCACATCCTTGGAGTCTGCCAGCAGCGAGGGCC +
Preference number: 5 (lower is better)
Translates to: SLPSVIGCQSNTSVW*CCPSHPWSLPAARA
Trigger: GGCCCTCGCTGCTGGCAGACTCCAAGGATGTGATGGACAGCACCACCACACAGAAGTATTGGATTGACATCCAATTACGCTGGGGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGATTCTCTGCATATCGCTaGGCCTGCAACTGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGFSAYR*ACNCCH
Trigger: ATGGCAGCAGTTGCAGGCCAAGCGATATGCAGAGAA...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCCAGGAATGGCCATGTaGAGTGCCTTAGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKPGMAM*SALEVK
Trigger: TTTTACCTCTAAGGCACTCAACATGGCCATTCCTGG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGTCAGGATCCTCAGTCTaGATGAACACAACGTTGGGA +
Preference number: 5 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGSGSSV*MNTTLG
Trigger: TCCCAACGTTGTGTTCATCAAGACTGAGGATCCTGA...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTCTTCTTCTGGGCTTaGGGAGGCCGGTGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQLFFWA*GGRCLR
Trigger: CCTCAAGCACCGGCCTCCCAAAGCCCAGAAGAAGAG...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCGGCCCAGGTTCTTTTaGCAAACAGTCTTGTCTACA +
Preference number: 5 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWRPRFF*QTVLST
Trigger: TGTAGACAAGACTGTTTGCAAAAAGAACCTGGGCCG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGGCCCAGGTTCTTTTaGCAAACAGTCTTGTCTACA +
Preference number: 5 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGRPRFF*QTVLST
Trigger: TGTAGACAAGACTGTTTGCAAAAAGAACCTGGGCCG...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGTACAGAAGAGTCGGATaGGGTGTGCAGCCTCAGTGG +
Preference number: 5 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWYRRVG*GVQPQW
Trigger: CCACTGAGGCTGCACACCCAATCCGACTCTTCTGTA...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAAGCCACACATGTaGAATAGCAGGTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRSKPHM*NSRLGL
Trigger: CAACCCCAACCTGCTATTCAACATGTGTGGCTTTGA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACTGAGCAATAGCCTCTaGTCTCTTGAGTGCATACTC +
Preference number: 5 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGLSNSL*SLECIL
Trigger: GAGTATGCACTCAAGAGACAAGAGGCTATTGCTCAG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGACTTTCGGGGATGGATaGTCTCCTTTTGCACTGTCT +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKTFGDG*SPFALS
Trigger: AGACAGTGCAAAAGGAGACAATCCATCCCCGAAAGT...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGAACTTTCGGGGATGGATaGTCTCCTTTTGCACTGTCT +
Preference number: 5 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGTFGDG*SPFALS
Trigger: AGACAGTGCAAAAGGAGACAATCCATCCCCGAAAGT...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGATGTGTGGATTATCTaGAGGAACAGCTGTCCCGTT +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEDVWII*RNSCPV
Trigger: AACGGGACAGCTGTTCCTCAAGATAATCCACACATC...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGATGTGTGGATTATCTaGAGGAACAGCTGTCCCGTT +
Preference number: 5 (lower is better)
Translates to: CQQLVWGGRSRGSRLWGSDVWII*RNSCPV
Trigger: AACGGGACAGCTGTTCCTCAAGATAATCCACACATC...AGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTCTCTCCATTCAGTCTTaGATGAGAAGGTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRLSIQS*MRRSGS
Trigger: AGACCCAGACCTTCTCATCAAAGACTGAATGGAGAG...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCTCTCCATTCAGTCTTaGATGAGAAGGTCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWLSIQS*MRRSGS
Trigger: AGACCCAGACCTTCTCATCAAAGACTGAATGGAGAG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 90 bp CCTCCACACCACCCAGCGCCTGAATCATGTCTGTGCGGTAGTTATTaGGGTTCCAAAGCTTGCCATCATGCCGCTGATGTGTCCACCAAA +
Preference number: 5 (lower is better)
Translates to: PPHHPAPESCLCGSY*GSKACHHAADVSTK
Trigger: TTTGGTGGACACATCAGCGGCATGATGGCAAGCTTTGGAACCTCAATAACTACCGCACAGACATGATTCAGGCGCTGGGTGGTGTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp CGGAATATCTGGATGAGAGAGATCTTCAGTGTGGGGATCTTGCCGTaGATGAAGATTCCTGTCAGGTCCAGCTGCACCTGGAAGCCCACA +
Preference number: 5 (lower is better)
Translates to: RNIWMREIFSVGILP*MKIPVRSSCTWKPT
Trigger: TGTGGGCTTCCAGGTGCAGCTGGACCTGACAGGAATCTTCATGCACGGCAAGATCCCCACACTGAAGATCTCTCTCATCCAGATATTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp GAAGTGGGAGGGCCTGTGGACCTCATGGTAGAATTCCTTGGGGTTTaGCAGCTGCAGCTCGTATTTCATGTTGGGATCATGTCGAACACC +
Preference number: 5 (lower is better)
Translates to: EVGGPVDLMVEFLGV*QLQLVFHVGIMSNT
Trigger: GGTGTTCGACATGATCCCAACATGAAATACGAGCTGCAGCTGGCAAACCCCAAGGAATTCTACCATGAGGTCCACAGGCCCTCCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp AACAAGCAGTGGAGGTGGCTCTGTGTCAGCAGGCTTGATCCAGGGTaGGAAAAGACGGCGTTTATCTGCTTCATACCACAGGTACTGGTC +
Preference number: 5 (lower is better)
Translates to: NKQWRWLCVSRLDPG*EKTAFICFIPQVLV
Trigger: GACCAGTACCTGTGGTATGAAGCAGATAAACGCCGTCTTTTCCCACCCTGGATCAAGCCTGCTGACACAGAGCCACCTCCACTGCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp TCCACCTTGATCCATTCCTCGTCAGTCAGCGTGGGCCAGATGTGGTaGGGTTCCGTAACAGTAGTCTTGTCTGGCTTCAGGATCACCTTT +
Preference number: 5 (lower is better)
Translates to: STLIHSSSVSVGQMW*GSVTVVLSGFRITF
Trigger: AAAGGTGATCCTGAAGCCAGACAAGACTACTGTTACGGAACCCCACCACATCTGGCCCACGCTGACTGACGAGGAATGGATCAAGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp CGGCACCATCACAATACAACGGATCTCCTTCACCTGAGGGTTATCTaGAGGGCTCACCCCATACAGGTATCCTGCAATTTGGGCACGAAG +
Preference number: 5 (lower is better)
Translates to: RHHHNTTDLLHLRVI*RAHPIQVSCNLGTK
Trigger: CTTCGTGCCCAAATTGCAGGATACCTGTATGGGGTGAGCCCTCCAGATAACCCTCAGGTGAAGGAGATCCGTTGTATTGTGATGGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGTTCTCTGCATATCGCTaGGCCTGCAACTGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWFSAYR*ACNCCH
Trigger: ATGGCAGCAGTTGCAGGCCAAGCGATATGCAGAGAA...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGATGGAAGGCATCTACATaGCCCAAGCGATACTGCACA +
Preference number: 5 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGWKAST*PKRYCT
Trigger: TGTGCAGTATCGCTTGGGCAATGTAGATGCCTTCCA...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAAGAATTGTCCGGGCCTaGTTCTGCTTGATGCCTTCA +
Preference number: 5 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGRIVRA*FCLMPS
Trigger: TGAAGGCATCAAGCAGAACAAGGCCCGGACAATTCT...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCCAACAATGTTTTCATaGTTGGGGTCTGGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWPTMFS*LGSGCS
Trigger: AGAACACCCAGACCCCAACAATGAAAACATTGTTGG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAAATAGCAGGTTGGGGTaGTCTTTACTGTACACAGAC +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSENSRLG*SLLYTD
Trigger: GTCTGTGTACAGTAAAGACAACCCCAACCTGCTATT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAATAGCCTCTTGTCTCTaGAGTGCATACTCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: QAQNAKGLTAECQQLVWGIASCL*SAYSAQ
Trigger: CTGGGCTGAGTATGCACTCAAGAGACAAGAGGCTAT...TCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCATGGATTGTCTCCTTTaGCACTGTCTCAATTTCCAG +
Preference number: 5 (lower is better)
Translates to: GLTAECQQLVWGGRSRGSMDCLL*HCLNFQ
Trigger: CTGGAAATTGAGACAGTGCAAAAGGAGACAATCCAT...GGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTCTGTCCATCACATCCTaGGAGTCTGCCAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: STTQAQNAKGLTAECQQLLSITS*ESASSE
Trigger: CTCGCTGCTGGCAGACTCCAAGGATGTGATGGACAG...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAATACAGCTGTAATCCTTaGCGTATCCGTTCACGTAAC +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEYSCNP*RIRSRN
Trigger: GTTACGTGAACGGATACGCAAAGGATTACAGCTGTA...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAATGAAGATGGCCCCATaGATGGGTTTAGTTGTCAAG +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEMKMAP*MGLVVK
Trigger: CTTGACAACTAAACCCATCAATGGGGCCATCTTCAT...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGATGAAGATGGCCCCATaGATGGGTTTAGTTGTCAAG +
Preference number: 5 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGMKMAP*MGLVVK
Trigger: CTTGACAACTAAACCCATCAATGGGGCCATCTTCAT...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGTGTCCCGTTCGTGGATaGAAGATGAAGATGGCCCCA +
Preference number: 5 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWCPVRG*KMKMAP
Trigger: TGGGGCCATCTTCATCTTCAATCCACGAACGGGACA...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTGGAGCTCCGATCCTTaGATCACAATATTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: QNAKGLTAECQQLVWGGRWSSDP*ITILGK
Trigger: TTTCCCCAATATTGTGATCAAAGGATCGGAGCTCCA...ACGCCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 90 bp TCAGGTCAATCTTCTCATACATCTTCTCAAACCGAGACTCCAGCATaGCGTTGCACTCGCCCTCACTCGTCTCCCACACATCCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: SGQSSHTSSQTETPA*RCTRPHSSPTHPAG
Trigger: ACCTGCAGGATGTGTGGGAGACGAGTGAGGGCGAGTGCAACGTCATGCTGGAGTCTCGGTTTGAGAAGATGTATGAGAAGATTGACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp AGTCCAACACAGGGGCATCCTCCTCTGGGTCCAGCTCTAGCTGAATaGCTTCCAGTGGCTCAACATCTAAGATGTTGTCGGCATAATCCA +
Preference number: 5 (lower is better)
Translates to: SPTQGHPPLGPALAE*LPVAQHLRCCRHNP
Trigger: TGGATTATGCCGACAACATCTTAGATGTTGAGCCACTGGAAGCCATTCAGCTAGAGCTGGACCCAGAGGAGGATGCCCCTGTGTTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp CAGGTTATTAATGCCTTGACACCACTTGTAAACAAGCAGTGGAGGTaGCTCTGTGTCAGCAGGCTTGATCCAGGGTGGGAAAAGACGGCG +
Preference number: 5 (lower is better)
Translates to: QVINALTPLVNKQWR*LCVSRLDPGWEKTA
Trigger: CGCCGTCTTTTCCCACCCTGGATCAAGCCTGCTGACACAGAGCCACCTCCACTGCTTGTTTACAAGTGGTGTCAAGGCATTAATAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp ATACTCAGCCCAGACCCGCTGGGAGTCAATGAACTCGCTCTCCCATaGCTGTATGTAGCGGTACAAGTTGGGAATCAGTTGGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ILSPDPLGVNELALP*LYVAVQVGNQLVFF
Trigger: GAAGAAGACCAACTGATTCCCAACTTGTACCGCTACATACAGCCATGGGAGAGCGAGTTCATTGACTCCCAGCGGGTCTGGGCTGAGTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp CATAGTCTCCCCAGCGTAATTGGATGTCAATCCAATACTTCTGTGTaGTGGTGCTGTCCATCACATCCTTGGAGTCTGCCAGCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: HSLPSVIGCQSNTSV*WCCPSHPWSLPAAR
Trigger: CCTCGCTGCTGGCAGACTCCAAGGATGTGATGGACAGCACCACCACACAGAAGTATTGGATTGACATCCAATTACGCTGGGGAGACTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGCATCAGCTTATATTaGTATCGATACATGCCTGTC +
Preference number: 5 (lower is better)
Translates to: AQNAKGLTAECQQLVWGGRISLY*YRYMPV
Trigger: GACAGGCATGTATCGATACAAATATAAGCTGATGCG...CCCTCCCCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGCGCATCAGCTTATATTaGTATCGATACATGCCTGTC +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKRISLY*YRYMPV
Trigger: GACAGGCATGTATCGATACAAATATAAGCTGATGCG...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCGGGCCTTGTTCTGCTaGATGCCTTCAGGCATCATG +
Preference number: 5 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQRALFC*MPSGIM
Trigger: CATGATGCCTGAAGGCATCAAGCAGAACAAGGCCCG...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp AGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAAGGAGTTCAATCCAATCTaGATACGTGTCTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: SSLSGEGVQEAPGFGDLKEFNPI*IRVWIL
Trigger: CAAGATCCAGACACGTATCAAGATTGGATTGAACTC...CTTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGACAAGTTGGGAATCAGTaGGTCTTCTTCATGACTCAT +
Preference number: 5 (lower is better)
Translates to: ECQQLVWGGRSRGSRLWGQVGNQ*VFFMTH
Trigger: ATGAGTCATGAAGAAGACCAACTGATTCCCAACTTG...TCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGTTTGCCTTCATGATCTaGGCCATGGCCTGCTGTATG +
Preference number: 5 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWFAFMI*AMACCM
Trigger: CATACAGCAGGCCATGGCCAAGATCATGAAGGCAAA...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGGGATCTGAACCTTTGATCACAATATaGGGGAAATCCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: QQLVWGGRSRGSRLWGSEPLITI*GKSSKW
Trigger: CCACTTACTGGATTTCCCCAATATTGTGATCAAAGG...TTCAGATCCCCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 90 bp CGGCAAACCTGCAGCCCTACCTCCACCCAGTCCAGCTTGGTGGACTaGAAGAATTTGGTAGCTTTGAAAGAACGGAACAGATACCTCTTC +
Preference number: 5 (lower is better)
Translates to: RQTCSPTSTQSSLVD*KNLVALKERNRYLF
Trigger: GAAGAGGTATCTGTTCCGTTCTTTCAAAGCTACCAAATTCTTTCAGTCCACCAAGCTGGACTGGGTGGAGGTAGGGCTGCAGGTTTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS TCA 90 bp TTATGGAAGCGTTGCATTGACTCATCATCCACACGCAGGAAGCACTaGGCTGTCCGCTCCTTGGTAACCTCATTCTGTAGGTTCCAGACC +
Preference number: 5 (lower is better)
Translates to: LWKRCIDSSSTRRKH*AVRSLVTSFCRFQT
Trigger: GGTCTGGAACCTACAGAATGAGGTTACCAAGGAGCGGACAGCTCAGTGCTTCCTGCGTGTGGATGATGAGTCAATGCAACGCTTCCATAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp GCATCCACAAACCCAAATTTCCGCTTCTCTGCATATCGCTTGGCCTaGAACTGCTGCCATTTTCGAGCTTTCTCCTGCAGCTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: ASTNPNFRFSAYRLA*NCCHFRAFSCSFSS
Trigger: AGAGGAGAAGCTGCAGGAGAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAAGCGATATGCAGAGAAGCGGAAATTTGGGTTTGTGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 90 bp TTCACAATCTTGGTGAACGTGGTGGAGCCAGAGGCCATCAGAATCTaGCGCACACGGTTATGGAAGCGTTGCATTGACTCATCATCCACA +
Preference number: 5 (lower is better)
Translates to: FTILVNVVEPEAIRI*RTRLWKRCIDSSST
Trigger: TGTGGATGATGAGTCAATGCAACGCTTCCATAACCGTGTGCGGCAGATTCTGATGGCCTCTGGCTCCACCACGTTCACCAAGATTGTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp GCGAAGGGTAGATACTCATGTTGTCTGTGGTGTAATCCAGGAACTTaGCCCGGGCATAGCGCTCAATATCATGGGAATCATAGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: AKGRYSCCLWCNPGT*PGHSAQYHGNHSLP
Trigger: GGGGAGACTATGATTCCCATGATATTGAGCGCTATGCCCGGGCCAAGTTCCTGGATTACACCACAGACAACATGAGTATCTACCCTTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp TCGTCACCGTGCTTGTTGACAGTTCGAGTCTGTGTAGCAGTGAGCTaGGACTGTTCCTTGGTCTGCTTTTCAATCTCAGCTATCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SSPCLLTVRVCVAVS*DCSLVCFSISAICC
Trigger: GCAGCAGATAGCTGAGATTGAAAAGCAGACCAAGGAACAGTCCCAGCTCACTGCTACACAGACTCGAACTGTCAACAAGCACGGTGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTCTTTGCCACCCCCTTaGAGTGACGGCCTTCAAACT +
Preference number: 5 (lower is better)
Translates to: STTQAQNAKGLTAECQQLSLPPP*SDGLQT
Trigger: AGTTTGAAGGCCGTCACTCAAAGGGGGTGGCAAAGA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAACCTTCCAAGGGATGTaGGCCTTCCAGCAGCGCCAG +
Preference number: 5 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAETFQGM*AFQQRQ
Trigger: CTGGCGCTGCTGGAAGGCCAACATCCCTTGGAAGGT...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GCTGAATGTCAGCAGCTTGTCTGGGGAGGGCGTTCAAGAGGCTCCAGGCTTTGGCAGGTTATTAATGCCTaGACACCACTTGTAAACAAG +
Preference number: 5 (lower is better)
Translates to: AECQQLVWGGRSRGSRLWQVINA*TPLVNK
Trigger: CTTGTTTACAAGTGGTGTCAAGGCATTAATAACCTG...CCAAAGCCTGGAGCCTCTTGAACGCCCTCCCCAGACAAGCTGCTGACATTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTGTCCCGTTCGTGGATaGAAGATGAAGATGGCCCCA +
Preference number: 5 (lower is better)
Translates to: STTQAQNAKGLTAECQQLCPVRG*KMKMAP
Trigger: TGGGGCCATCTTCATCTTCAATCCACGAACGGGACA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGCCAAGATCAGATCCTaGAGCTGTACCTCCACCTTG +
Preference number: 5 (lower is better)
Translates to: STTQAQNAKGLTAECQQLAKIRS*SCTSTL
Trigger: CAAGGTGGAGGTACAGCTCAAGGATCTGATCTTGGC...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 90 bp GCGGTACAAGTTGGGAATCAGTTGGTCTTCTTCATGACTCATTCCTaGACGGAAGTGTGTGATGCCCACATCTGTCTGCTTGGACCACCT +
Preference number: 5 (lower is better)
Translates to: AVQVGNQLVFFMTHS*TEVCDAHICLLGPP
Trigger: AGGTGGTCCAAGCAGACAGATGTGGGCATCACACACTTCCGTTCAGGAATGAGTCATGAAGAAGACCAACTGATTCCCAACTTGTACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp GATCTGCTCCCAAGGCATGGGCATGTTCTCAAGGAGCTTGAGGACTaGATGAGGCATGTACTTAAGAGCTCCCAAATAGACCCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: DLLPRHGHVLKELED*MRHVLKSSQIDPFV
Trigger: GACAAAAGGGTCTATTTGGGAGCTCTTAAGTACATGCCTCATGCAGTCCTCAAGCTCCTTGAGAACATGCCCATGCCTTGGGAGCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp TCTGAGCATCCACAAACCCAAATTTCCGCTTCTCTGCATATCGCTTaGCCTGCAACTGCTGCCATTTTCGAGCTTTCTCCTGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: SEHPQTQISASLHIA*PATAAIFELSPAAS
Trigger: AGAAGCTGCAGGAGAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAAGCGATATGCAGAGAAGCGGAAATTTGGGTTTGTGGATGCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp ATCCTGCAGGTTATTAATGCCTTGACACCACTTGTAAACAAGCAGTaGAGGTGGCTCTGTGTCAGCAGGCTTGATCCAGGGTGGGAAAAG +
Preference number: 5 (lower is better)
Translates to: ILQVINALTPLVNKQ*RWLCVSRLDPGWEK
Trigger: CTTTTCCCACCCTGGATCAAGCCTGCTGACACAGAGCCACCTCCACTGCTTGTTTACAAGTGGTGTCAAGGCATTAATAACCTGCAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp AGATCCCCAAACTTCTCCACCTTGAGACAAGCCTGGAAGGGCAGCTaGAGCTCCGATCCTTTGATCACAATATTGGGGAAATCCAGTAAG +
Preference number: 5 (lower is better)
Translates to: RSPNFSTLRQAWKGS*SSDPLITILGKSSK
Trigger: CTTACTGGATTTCCCCAATATTGTGATCAAAGGATCGGAGCTCCAGCTGCCCTTCCAGGCTTGTCTCAAGGTGGAGAAGTTTGGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTGTGAACTGCCAGCGTaGGTAGGTGGAACCATTAAC +
Preference number: 5 (lower is better)
Translates to: STTQAQNAKGLTAECQQLCELPA*VGGTIN
Trigger: GTTAATGGTTCCACCTACCAACGCTGGCAGTTCACA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTCCCGATACCAGTTCTaGACAAGGGGTATGTCCAAG +
Preference number: 5 (lower is better)
Translates to: STTQAQNAKGLTAECQQLSRYQF*TRGMSK
Trigger: CTTGGACATACCCCTTGTCAAGAACTGGTATCGGGA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTGGAAGGCATCTACATaGCCCAAGCGATACTGCACA +
Preference number: 5 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQWKAST*PKRYCT
Trigger: TGTGCAGTATCGCTTGGGCAATGTAGATGCCTTCCA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTGTCGGGCCAGAAGGTaGCCCAGCCATCGCTCTAGC +
Preference number: 5 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGCRARR*PSHRSS
Trigger: GCTAGAGCGATGGCTGGGCAACCTTCTGGCCCGACA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGACAATGTTTTCATTGTaGGGGTCTGGGTGTTCTGTC +
Preference number: 5 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWTMFSL*GSGCSV
Trigger: GACAGAACACCCAGACCCCAACAATGAAAACATTGT...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAACCCACATCTGTCTGCTaGGACCACCTGAGGTCAGAC +
Preference number: 5 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEPTSVC*DHLRSD
Trigger: GTCTGACCTCAGGTGGTCCAAGCAGACAGATGTGGG...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTATAGCCTCTTGTCTCTaGAGTGCATACTCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: STTQAQNAKGLTAECQQLIASCL*SAYSAQ
Trigger: CTGGGCTGAGTATGCACTCAAGAGACAAGAGGCTAT...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGTCCGTAACAGTAGTCTaGTCTGGCTTCAGGATCACC +
Preference number: 5 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQSVTVV*SGFRIT
Trigger: GGTGATCCTGAAGCCAGACAAGACTACTGTTACGGA...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp CATGTCTTCCTTCTGAGCATCCACAAACCCAAATTTCCGCTTCTCTaGATATCGCTTGGCCTGCAACTGCTGCCATTTTCGAGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: HVFLLSIHKPKFPLL*ISLGLQLLPFSSFL
Trigger: GAGAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAAGCGATATGCAGAGAAGCGGAAATTTGGGTTTGTGGATGCTCAGAAGGAAGACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 90 bp TATCGATACATGCCTGTCAACTGTCCCACGTGGGCAAATATATACTaGAAACCATCTGCCAGCTGGAAGGCATCTACATTGCCCAAGCGA +
Preference number: 5 (lower is better)
Translates to: YRYMPVNCPTWANIY*KPSASWKASTLPKR
Trigger: TCGCTTGGGCAATGTAGATGCCTTCCAGCTGGCAGATGGTTTGCAGTATATATTTGCCCACGTGGGACAGTTGACAGGCATGTATCGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp CTACATTGCCCAAGCGATACTGCACATGGCTGTCCACAACCAGCTTaGTTAAACGCAGTACTTCCCGACATAGATGGAAAGCATTCCCAA +
Preference number: 5 (lower is better)
Translates to: LHCPSDTAHGCPQPA*LNAVLPDIDGKHSQ
Trigger: TTGGGAATGCTTTCCATCTATGTCGGGAAGTACTGCGTTTAACCAAGCTGGTTGTGGACAGCCATGTGCAGTATCGCTTGGGCAATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp GGGGCCAGCATTTCTTGTTATTGTAGCCAACAATGTTTTCATTGTTaGGGTCTGGGTGTTCTGTCAGGTAACGCTGGATCAGATCCCGAG +
Preference number: 5 (lower is better)
Translates to: GASISCYCSQQCFHC*GLGVLSGNAGSDPE
Trigger: CTCGGGATCTGATCCAGCGTTACCTGACAGAACACCCAGACCCCAACAATGAAAACATTGTTGGCTACAATAACAAGAAATGCTGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp TGTGAAGCTGCACGTGATGATAATAGTCTTCTCCCCATCCCAAGATaGGTTGTCAGCCATGATTTTGGCATGAGTGGTGACATCTTGGGG +
Preference number: 5 (lower is better)
Translates to: CEAARDDNSLLPIPR*VVSHDFGMSGDILG
Trigger: CCCCAAGATGTCACCACTCATGCCAAAATCATGGCTGACAACCCATCTTGGGATGGGGAGAAGACTATTATCATCACGTGCAGCTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTCTCTTCTTCTGGGCTTaGGGAGGCCGGTGCTTGAGG +
Preference number: 5 (lower is better)
Translates to: FCSGLQSINNTSTERKGALFFWA*GGRCLR
Trigger: CCTCAAGCACCGGCCTCCCAAAGCCCAGAAGAAGAG...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTTCAAAGCCACACATGTaGAATAGCAGGTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: STTQAQNAKGLTAECQQLSKPHM*NSRLGL
Trigger: CAACCCCAACCTGCTATTCAACATGTGTGGCTTTGA...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGGAGTTCAATCCAATCTaGATACGTGTCTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWEFNPI*IRVWIL
Trigger: CAAGATCCAGACACGTATCAAGATTGGATTGAACTC...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAAAAGGGTTCCATCTCCTaGAGGTACTCATGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEKGSIS*RYSCWG
Trigger: GCCCCAGCATGAGTACCTCAAGGAGATGGAACCCTT...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTGCAGAAGGGCGAAGTaGAGGAAGTGGGAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGCRRAK*RKWEGL
Trigger: CAGGCCCTCCCACTTCCTCAACTTCGCCCTTCTGCA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp TGTGTCAGCAGGCTTGATCCAGGGTGGGAAAAGACGGCGTTTATCTaGTTCATACCACAGGTACTGGTCCAGGTAAGCATCAGTTATTTT +
Preference number: 5 (lower is better)
Translates to: CVSRLDPGWEKTAFI*FIPQVLVQVSISYF
Trigger: AAAATAACTGATGCTTACCTGGACCAGTACCTGTGGTATGAAGCAGATAAACGCCGTCTTTTCCCACCCTGGATCAAGCCTGCTGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 90 bp CTTTCGGGGATGGATTGTCTCCTTTTGCACTGTCTCAATTTCCAGTaGATCCAGTTCCTGGTCAAAGACCTGACACAAGTCCATCACGAT +
Preference number: 5 (lower is better)
Translates to: LSGMDCLLLHCLNFQ*IQFLVKDLTQVHHD
Trigger: ATCGTGATGGACTTGTGTCAGGTCTTTGACCAGGAACTGGATGCACTGGAAATTGAGACAGTGCAAAAGGAGACAATCCATCCCCGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp ACAGGTAAGGCTCAGTGGGCTCAGATGAATACAGCTGTAATCCTTTaGGTATCCGTTCACGTAACACATACAACGCAGGGTTTGCCTTCA +
Preference number: 5 (lower is better)
Translates to: TGKAQWAQMNTAVIL*VSVHVTHTTQGLPS
Trigger: TGAAGGCAAACCCTGCGTTGTATGTGTTACGTGAACGGATACGCAAAGGATTACAGCTGTATTCATCTGAGCCCACTGAGCCTTACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp GTGGGGTTCCGTAACAGTAGTCTTGTCTGGCTTCAGGATCACCTTTaGTCTATCATTGTTCACATGCAAAGCCCGCAGAATCAGAATGAG +
Preference number: 5 (lower is better)
Translates to: VGFRNSSLVWLQDHL*SIIVHMQSPQNQNE
Trigger: CTCATTCTGATTCTGCGGGCTTTGCATGTGAACAATGATAGAGCAAAGGTGATCCTGAAGCCAGACAAGACTACTGTTACGGAACCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp GTTGGTCATGTCTCCATGGTCTCGAATGATCTTCCTGACATGTTCTaGTGGCATGTCTTCCTTCTGAGCATCCACAAACCCAAATTTCCG +
Preference number: 5 (lower is better)
Translates to: VGHVSMVSNDLPDMF*WHVFLLSIHKPKFP
Trigger: CGGAAATTTGGGTTTGTGGATGCTCAGAAGGAAGACATGCCACCAGAACATGTCAGGAAGATCATTCGAGACCATGGAGACATGACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp GAACACAACGTTGGGAGTGTGGTACCAGGTCAGGTGGACGTGGTGTaGAAGGTTGTTATACAGGTAAGGAAAAGCAATCTTGTACTCAGT +
Preference number: 5 (lower is better)
Translates to: EHNVGSVVPGQVDVV*KVVIQVRKSNLVLS
Trigger: ACTGAGTACAAGATTGCTTTTCCTTACCTGTATAACAACCTTCCACACCACGTCCACCTGACCTGGTACCACACTCCCAACGTTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp GTCTGTATAGAGAGGTGTATCCTTCAGGAAGGGCTCGACAAACTCTaGGAGTTCAAACTCTTCATCATCATCAGGCAGTGGTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: VCIERCILQEGLDKL*EFKLFIIIRQWFLA
Trigger: AGCCAAGAACCACTGCCTGATGATGATGAAGAGTTTGAACTCCCAGAGTTTGTCGAGCCCTTCCTGAAGGATACACCTCTCTATACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS-3UTR CAA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGGATTTCTTTCTTTCCTaGGTGGTGAGCGTCTTGACA +
Preference number: 5 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQDFFLS*VVSVLT
Trigger: TGTCAAGACGCTCACCACCAAGGAAAGAAAGAAATC...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp ACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTGTCTGGATACGTGTCTGGATCTaGTTTTCACACTTCACCAAT +
Preference number: 5 (lower is better)
Translates to: TQAQNAKGLTAECQQLVWIRVWI*FSHFTN
Trigger: ATTGGTGAAGTGTGAAAACAAGATCCAGACACGTAT...CCAGACAAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTTTGGGGTTGTTGCCTTaGTCTGTGTTCTGCCGGCCC +
Preference number: 5 (lower is better)
Translates to: FCSGLQSINNTSTERKGALGLLP*SVFCRP
Trigger: GGGCCGGCAGAACACAGACAAAGGCAACAACCCCAA...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 90 bp TCTCGAATGATCTTCCTGACATGTTCTGGTGGCATGTCTTCCTTCTaGGCATCCACAAACCCAAATTTCCGCTTCTCTGCATATCGCTTG +
Preference number: 5 (lower is better)
Translates to: SRMIFLTCSGGMSSF*ASTNPNFRFSAYRL
Trigger: CAAGCGATATGCAGAGAAGCGGAAATTTGGGTTTGTGGATGCTCAGAAGGAAGACATGCCACCAGAACATGTCAGGAAGATCATTCGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp CTGTCCACAACCAGCTTGGTTAAACGCAGTACTTCCCGACATAGATaGAAAGCATTCCCAAAACGGGATTTCTTTCTTTCCTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LSTTSLVKRSTSRHR*KAFPKRDFFLSLVV
Trigger: CACCACCAAGGAAAGAAAGAAATCCCGTTTTGGGAATGCTTTCCATCTATGTCGGGAAGTACTGCGTTTAACCAAGCTGGTTGTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp GCATTTCTTGTTATTGTAGCCAACAATGTTTTCATTGTTGGGGTCTaGGTGTTCTGTCAGGTAACGCTGGATCAGATCCCGAGCCTCATC +
Preference number: 5 (lower is better)
Translates to: AFLVIVANNVFIVGV*VFCQVTLDQIPSLI
Trigger: GATGAGGCTCGGGATCTGATCCAGCGTTACCTGACAGAACACCCAGACCCCAACAATGAAAACATTGTTGGCTACAATAACAAGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGACAAGAGGCTCAAATTaGGGTCCCCCAGGAATGGCC +
Preference number: 5 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGTRGSN*GPPGMA
Trigger: GGCCATTCCTGGGGGACCCAAATTTGAGCCTCTTGT...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCGGGCCTTGTTCTGCTaGATGCCTTCAGGCATCATG +
Preference number: 5 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGRALFC*MPSGIM
Trigger: CATGATGCCTGAAGGCATCAAGCAGAACAAGGCCCG...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCAAGTTGGGAATCAGTaGGTCTTCTTCATGACTCAT +
Preference number: 5 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQQVGNQ*VFFMTH
Trigger: ATGAGTCATGAAGAAGACCAACTGATTCCCAACTTG...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGATGGATTGTCTCCTTTaGCACTGTCTCAATTTCCAG +
Preference number: 5 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQMDCLL*HCLNFQ
Trigger: CTGGAAATTGAGACAGTGCAAAAGGAGACAATCCAT...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTGCTGTATGAGAGGCTaGCTGCCCGGGAACCAGTTT +
Preference number: 5 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGCCMRG*LPGNQF
Trigger: AAACTGGTTCCCGGGCAGCAAGCCTCTCATACAGCA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCCTTTGATCACAATATaGGGGAAATCCAGTAAGTGG +
Preference number: 5 (lower is better)
Translates to: LSTTQAQNAKGLTAECQQPLITI*GKSSKW
Trigger: CCACTTACTGGATTTCCCCAATATTGTGATCAAAGG...CTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATCCGTAACAGTAGTCTaGTCTGGCTTCAGGATCACC +
Preference number: 5 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAESVTVV*SGFRIT
Trigger: GGTGATCCTGAAGCCAGACAAGACTACTGTTACGGA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 90 bp CAGAGGGTAAATCTACGATTAGGAATCTGGTTTAATCCTGATCGCTaGGCATTGGTCAGCTTCTTCCACTTCATGGACTCCTCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: QRVNLRLGIWFNPDR*ALVSFFHFMDSSKP
Trigger: TGGCTTTGAGGAGTCCATGAAGTGGAAGAAGCTGACCAATGCTCAGCGATCAGGATTAAACCAGATTCCTAATCGTAGATTTACCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 90 bp TGCACATGCGGATCTGCCGCATCAGCTTATATTTGTATCGATACATaGCTGTCAACTGTCCCACGTGGGCAAATATATACTGCAAACCAT +
Preference number: 5 (lower is better)
Translates to: CTCGSAASAYICIDT*LSTVPRGQIYTANH
Trigger: ATGGTTTGCAGTATATATTTGCCCACGTGGGACAGTTGACAGGCATGTATCGATACAAATATAAGCTGATGCGGCAGATCCGCATGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 90 bp AATATGGATGCGATCAATGTATCTACAGAAGAGTCGGATTGGGTGTaGAGCCTCAGTGGCTATGTCCTGGAAACTGAGAAAGTCATTTGG +
Preference number: 5 (lower is better)
Translates to: NMDAINVSTEESDWV*SLSGYVLETEKVIW
Trigger: CCAAATGACTTTCTCAGTTTCCAGGACATAGCCACTGAGGCTGCACACCCAATCCGACTCTTCTGTAGATACATTGATCGCATCCATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp GTGTCTATGGGAGATTGGGTTGATCAAAGGATCAAAGTAGAAAGCTaGCAGATCAGGATCCTCAGTCTTGATGAACACAACGTTGGGAGT +
Preference number: 5 (lower is better)
Translates to: VSMGDWVDQRIKVES*QIRILSLDEHNVGS
Trigger: ACTCCCAACGTTGTGTTCATCAAGACTGAGGATCCTGATCTGCCAGCTTTCTACTTTGATCCTTTGATCAACCCAATCTCCCATAGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp GAAGAAAATATGGATGCGATCAATGTATCTACAGAAGAGTCGGATTaGGTGTGCAGCCTCAGTGGCTATGTCCTGGAAACTGAGAAAGTC +
Preference number: 5 (lower is better)
Translates to: EENMDAINVSTEESD*VCSLSGYVLETEKV
Trigger: GACTTTCTCAGTTTCCAGGACATAGCCACTGAGGCTGCACACCCAATCCGACTCTTCTGTAGATACATTGATCGCATCCATATTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp CCATACAGATGTGTGGATTATCTTGAGGAACAGCTGTCCCGTTCGTaGATTGAAGATGAAGATGGCCCCATTGATGGGTTTAGTTGTCAA +
Preference number: 5 (lower is better)
Translates to: PYRCVDYLEEQLSRS*IEDEDGPIDGFSCQ
Trigger: TTGACAACTAAACCCATCAATGGGGCCATCTTCATCTTCAATCCACGAACGGGACAGCTGTTCCTCAAGATAATCCACACATCTGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTCAGGTTATTAATGCCTaGACACCACTTGTAAACAAG +
Preference number: 5 (lower is better)
Translates to: STTQAQNAKGLTAECQQLQVINA*TPLVNK
Trigger: CTTGTTTACAAGTGGTGTCAAGGCATTAATAACCTG...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAACTGAGCAATAGCCTCTaGTCTCTTGAGTGCATACTC +
Preference number: 5 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAELSNSL*SLECIL
Trigger: GAGTATGCACTCAAGAGACAAGAGGCTATTGCTCAG...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 90 bp CTTTATCATAAGCCAATGTGTGCCGGTCTTTCTGGAAGAGGGTATTaGTCCGGGGAATGCCTCGATCCCATGAATCTTCTAAATCTTCTA +
Preference number: 5 (lower is better)
Translates to: LYHKPMCAGLSGRGY*SGECLDPMNLLNLL
Trigger: TAGAAGATTTAGAAGATTCATGGGATCGAGGCATTCCCCGGATCAATACCCTCTTCCAGAAAGACCGGCACACATTGGCTTATGATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp ATCAGCTTATATTTGTATCGATACATGCCTGTCAACTGTCCCACGTaGGCAAATATATACTGCAAACCATCTGCCAGCTGGAAGGCATCT +
Preference number: 5 (lower is better)
Translates to: ISLYLYRYMPVNCPT*ANIYCKPSASWKAS
Trigger: AGATGCCTTCCAGCTGGCAGATGGTTTGCAGTATATATTTGCCCACGTGGGACAGTTGACAGGCATGTATCGATACAAATATAAGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp ATACCACAGGTACTGGTCCAGGTAAGCATCAGTTATTTTCTCCAGTaGTTCCACATCATACACTGGTACAAGGTGGCTATAGAGATCCAT +
Preference number: 5 (lower is better)
Translates to: IPQVLVQVSISYFLQ*FHIIHWYKVAIEIH
Trigger: ATGGATCTCTATAGCCACCTTGTACCAGTGTATGATGTGGAACCACTGGAGAAAATAACTGATGCTTACCTGGACCAGTACCTGTGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 90 bp AACCGGCTAGGCATCTTGGAGTTCAATCCAATCTTGATACGTGTCTaGATCTTGTTTTCACACTTCACCAATAAGTCCAGGAGTTCCTGT +
Preference number: 5 (lower is better)
Translates to: NRLGILEFNPILIRV*ILFSHFTNKSRSSC
Trigger: ACAGGAACTCCTGGACTTATTGGTGAAGTGTGAAAACAAGATCCAGACACGTATCAAGATTGGATTGAACTCCAAGATGCCTAGCCGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATCTTCATCCTGTAAGTaGATGTCTCGAACAAGAGGC +
Preference number: 5 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAESSSCK*MSRTRG
Trigger: GCCTCTTGTTCGAGACATCAACTTACAGGATGAAGA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGTCAGCAGCTTAAGAATTTGGTAGCTTaGAAAGAACGGAACAGATAC +
Preference number: 5 (lower is better)
Translates to: STTQAQNAKGLTAECQQLKNLVA*KERNRY
Trigger: GTATCTGTTCCGTTCTTTCAAAGCTACCAAATTCTT...AAGCTGCTGACATTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp GATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTGACTGCTGAATGGAGCTCCGATCCTTaGATCACAATATTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: DYNLSTTQAQNAKGLTAEWSSDP*ITILGK
Trigger: TTTCCCCAATATTGTGATCAAAGGATCGGAGCTCCA...TTCAGCAGTCAGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGTCGTCACCGTGCTTGTaGACAGTTCGAGTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGSSPCL*TVRVCV
Trigger: TACACAGACTCGAACTGTCAACAAGCACGGTGACGA...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 90 bp CAGGTAAGCATCAGTTATTTTCTCCAGTGGTTCCACATCATACACTaGTACAAGGTGGCTATAGAGATCCATAAACTCAATGCCCACTTC +
Preference number: 5 (lower is better)
Translates to: QVSISYFLQWFHIIH*YKVAIEIHKLNAHF
Trigger: GAAGTGGGCATTGAGTTTATGGATCTCTATAGCCACCTTGTACCAGTGTATGATGTGGAACCACTGGAGAAAATAACTGATGCTTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS-3UTR CAA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCCAGGAATGGCCATGTaGAGTGCCTTAGAGGTAAAA +
Preference number: 5 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGPGMAM*SALEVK
Trigger: TTTTACCTCTAAGGCACTCAACATGGCCATTCCTGG...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTTCAGGATCCTCAGTCTaGATGAACACAACGTTGGGA +
Preference number: 5 (lower is better)
Translates to: FCSGLQSINNTSTERKGASGSSV*MNTTLG
Trigger: TCCCAACGTTGTGTTCATCAAGACTGAGGATCCTGA...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTTCTTCATCCTGTAAGTaGATGTCTCGAACAAGAGGC +
Preference number: 5 (lower is better)
Translates to: FCSGLQSINNTSTERKGASSSCK*MSRTRG
Trigger: GCCTCTTGTTCGAGACATCAACTTACAGGATGAAGA...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTACAATGTTTTCATTGTaGGGGTCTGGGTGTTCTGTC +
Preference number: 5 (lower is better)
Translates to: FCSGLQSINNTSTERKGATMFSL*GSGCSV
Trigger: GACAGAACACCCAGACCCCAACAATGAAAACATTGT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCCAACAATGTTTTCATaGTTGGGGTCTGGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGPTMFS*LGSGCS
Trigger: AGAACACCCAGACCCCAACAATGAAAACATTGTTGG...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTAATAGCAGGTTGGGGTaGTCTTTACTGTACACAGAC +
Preference number: 5 (lower is better)
Translates to: FCSGLQSINNTSTERKGANSRLG*SLLYTD
Trigger: GTCTGTGTACAGTAAAGACAACCCCAACCTGCTATT...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp TTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGCTTACAGCTGTAATCCTTaGCGTATCCGTTCACGTAAC +
Preference number: 5 (lower is better)
Translates to: FCSGLQSINNTSTERKGAYSCNP*RIRSRN
Trigger: GTTACGTGAACGGATACGCAAAGGATTACAGCTGTA...AGCCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS-3UTR CAA 90 bp CATTTTGTTCAGGATTACAATCTATCAACAACACAAGCACAGAACGCAAAGGGGAAGAATTTGGTAGCTTaGAAAGAACGGAACAGATAC +
Preference number: 5 (lower is better)
Translates to: HFVQDYNLSTTQAQNAKGKNLVA*KERNRY
Trigger: GTATCTGTTCCGTTCTTTCAAAGCTACCAAATTCTT...CCCCTTTGCGTTCTGTGCTTGTGTTGTTGATAGATTGTAATCCTGAACAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp AAGGGGATGGGCGAGAATCTCCGGCTCTCCAGCCAGTaGACAGTGGTGGTATACACGGCCACTGCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: KGMGENLRLSSQ*TVVVYTATASS
Trigger: CGAGGAGGCAGTGGCCGTGTATACCACCACTGTGCACTGGCTGGAGAGCCGGAGATTCTCGCCCATCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp TTGGACCACCTGAGGTCAGACTGGGGGATAAGCACATaGCCCATCGAGAGCATGCCAAGCCCACCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LDHLRSDWGIST*PIESMPSPPSS
Trigger: GGAGCTGGGTGGGCTTGGCATGCTCTCGATGGGCCATGTGCTTATCCCCCAGTCTGACCTCAGGTGGTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp CCCATCCTTCAGGTAATTGTGCTGCCGCTCCTGCTCTaGCTTCAGATACAGGCGAGTGAGGCGGCCCAGGTT +
Preference number: 6 (lower is better)
Translates to: PILQVIVLPLLL*LQIQASEAAQV
Trigger: AACCTGGGCCGCCTCACTCGCCTGTATCTGAAGGCAGAGCAGGAGCGGCAGCACAATTACCTGAAGGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp ATAGGTGTTGGCAGTCCTGGGACCTTCCAAGGGATGTaGGCCTTCCAGCAGCGCCAGGCTTCACTGAGGTGC +
Preference number: 6 (lower is better)
Translates to: IGVGSPGTFQGM*AFQQRQASLRC
Trigger: GCACCTCAGTGAAGCCTGGCGCTGCTGGAAGGCCAACATCCCTTGGAAGGTCCCAGGACTGCCAACACCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp CGAGTGAGGCGGCCCAGGTTCTTTTTGCAAACAGTCTaGTCTACAGTAGCCCCGCGACGGATCCGTTCCCGG +
Preference number: 6 (lower is better)
Translates to: RVRRPRFFLQTV*STVAPRRIRSR
Trigger: CCGGGAACGGATCCGTCGCGGGGCTACTGTAGACAAGACTGTTTGCAAAAAGAACCTGGGCCGCCTCACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 90 bp GCTCCAGGTCAAAGTGCGACTCCACCCGCTGCTTCGTTACTGTCTTaGCCACCCCCTTTGAGTGACGGCCTTCAAACTGTCGGGCCAGAA +
Preference number: 6 (lower is better)
Translates to: APGQSATPPAASLLS*PPPLSDGLQTVGPE
Trigger: TTCTGGCCCGACAGTTTGAAGGCCGTCACTCAAAGGGGGTGGCAAAGACAGTAACGAAGCAGCGGGTGGAGTCGCACTTTGACCTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS TCA 72 bp GCATCATGTCCAGAATGTCGTGCATCACAGCAGCCCTaGGCTCCAGGTCAAAGTGCGACTCCACCCGCTGCT +
Preference number: 6 (lower is better)
Translates to: ASCPECRASQQP*APGQSATPPAA
Trigger: AGCAGCGGGTGGAGTCGCACTTTGACCTGGAGCTCAGGGCTGCTGTGATGCACGACATTCTGGACATGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS TCA 72 bp AAGGGATGTTGGCCTTCCAGCAGCGCCAGGCTTCACTaGGGTGCTGCAGAATTGTCCGGGCCTTGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: KGCWPSSSARLH*GAAELSGPCSA
Trigger: AGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTGGCGCTGCTGGAAGGCCAACATCCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS TCA 72 bp CAGAGTAGACCTCACCCTCCTGCAGAAGGGCGAAGTTaGGGAAGTGGGAGGGCCTGTGGACCTCATGGTAGA +
Preference number: 6 (lower is better)
Translates to: QSRPHPPAEGRS*GSGRACGPHGR
Trigger: TCTACCATGAGGTCCACAGGCCCTCCCACTTCCTCAACTTCGCCCTTCTGCAGGAGGGTGAGGTCTACTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp CCAGTGATGTGGTACAGCACAGGCACGTCCCGGATCTaGTCCCAAGGCATGGGCATGTTCTCAAGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: PVMWYSTGTSRI*SQGMGMFSRSL
Trigger: CAAGCTCCTTGAGAACATGCCCATGCCTTGGGAGCAGATCCGGGACGTGCCTGTGCTGTACCACATCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp TCGTGCATCACAGCAGCCCTGAGCTCCAGGTCAAAGTaGGACTCCACCCGCTGCTTCGTTACTGTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: SCITAALSSRSK*DSTRCFVTVFA
Trigger: GGCAAAGACAGTAACGAAGCAGCGGGTGGAGTCGCACTTTGACCTGGAGCTCAGGGCTGCTGTGATGCACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp TTGGCCTTCCAGCAGCGCCAGGCTTCACTGAGGTGCTaGAGAATTGTCCGGGCCTTGTTCTGCTTGATGCCT +
Preference number: 6 (lower is better)
Translates to: LAFQQRQASLRC*RIVRALFCLMP
Trigger: AGGCATCAAGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTGGCGCTGCTGGAAGGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp ATGTCCCAGAACACTGCCCGACCCAAGTTGACATCATaGTTCATGAGCCGCATTCGGGCATCTCGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: MSQNTARPKLTS*FMSRIRASRGQ
Trigger: CTGGCCCCGAGATGCCCGAATGCGGCTCATGAAGCATGATGTCAACTTGGGTCGGGCAGTGTTCTGGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp CTTTGTCTGTGTTCTGCCGGCCCCACTCATACCCACTaGGTGTCAGCTTGTAGGCTGTCAGTGTGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: LCLCSAGPTHTH*VSACRLSVCRS
Trigger: GCTCCTGCACACTGACAGCCTACAAGCTGACACCCAGTGGGTATGAGTGGGGCCGGCAGAACACAGACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp TCTGAACCCTCTCGTAGTGCGAGGGTAGGTAGCCTTTaGGGTTGTTGCCTTTGTCTGTGTTCTGCCGGCCCC +
Preference number: 6 (lower is better)
Translates to: SEPSRSARVGSL*GCCLCLCSAGP
Trigger: GGGGCCGGCAGAACACAGACAAAGGCAACAACCCCAAAGGCTACCTACCCTCGCACTACGAGAGGGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp CCACCCGCTGCTTCGTTACTGTCTTTGCCACCCCCTTaGAGTGACGGCCTTCAAACTGTCGGGCCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: PPAASLLSLPPP*SDGLQTVGPEG
Trigger: ACCTTCTGGCCCGACAGTTTGAAGGCCGTCACTCAAAGGGGGTGGCAAAGACAGTAACGAAGCAGCGGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 90 bp CAGCAGCGCCAGGCTTCACTGAGGTGCTGCAGAATTGTCCGGGCCTaGTTCTGCTTGATGCCTTCAGGCATCATGTCCAGAATGTCGTGC +
Preference number: 6 (lower is better)
Translates to: QQRQASLRCCRIVRA*FCLMPSGIMSRMSC
Trigger: GCACGACATTCTGGACATGATGCCTGAAGGCATCAAGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTGGCGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 90 bp TGCTCTGCCTTCAGATACAGGCGAGTGAGGCGGCCCAGGTTCTTTTaGCAAACAGTCTTGTCTACAGTAGCCCCGCGACGGATCCGTTCC +
Preference number: 6 (lower is better)
Translates to: CSAFRYRRVRRPRFF*QTVLSTVAPRRIRS
Trigger: GGAACGGATCCGTCGCGGGGCTACTGTAGACAAGACTGTTTGCAAAAAGAACCTGGGCCGCCTCACTCGCCTGTATCTGAAGGCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS TCA 72 bp CACCCGCTGCTTCGTTACTGTCTTTGCCACCCCCTTTaGGTGACGGCCTTCAAACTGTCGGGCCAGAAGGTT +
Preference number: 6 (lower is better)
Translates to: HPLLRYCLCHPL*VTAFKLSGQKV
Trigger: AACCTTCTGGCCCGACAGTTTGAAGGCCGTCACTCAAAGGGGGTGGCAAAGACAGTAACGAAGCAGCGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS TCA 72 bp GCTGCCGCTCCTGCTCTGCCTTCAGATACAGGCGAGTaGGGCGGCCCAGGTTCTTTTTGCAAACAGTCTTGT +
Preference number: 6 (lower is better)
Translates to: AAAPALPSDTGE*GGPGSFCKQSC
Trigger: ACAAGACTGTTTGCAAAAAGAACCTGGGCCGCCTCACTCGCCTGTATCTGAAGGCAGAGCAGGAGCGGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS TCA 72 bp CAGTGGTGGTATACACGGCCACTGCCTCCTCGGCTGTaGTGTAAGGCCCATCCTTCAGGTAATTGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: QWWYTRPLPPRL*CKAHPSGNCAA
Trigger: GGCAGCACAATTACCTGAAGGATGGGCCTTACATCACAGCCGAGGAGGCAGTGGCCGTGTATACCACCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp ATGTTGGCCTTCCAGCAGCGCCAGGCTTCACTGAGGTaGTGCAGAATTGTCCGGGCCTTGTTCTGCTTGATG +
Preference number: 6 (lower is better)
Translates to: MLAFQQRQASLR*CRIVRALFCLM
Trigger: CATCAAGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTGGCGCTGCTGGAAGGCCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp TCTCGTAGTGCGAGGGTAGGTAGCCTTTGGGGTTGTTaGCTTTGTCTGTGTTCTGCCGGCCCCACTCATACC +
Preference number: 6 (lower is better)
Translates to: SRSARVGSLWGC*LCLCSAGPTHT
Trigger: GGTATGAGTGGGGCCGGCAGAACACAGACAAAGGCAACAACCCCAAAGGCTACCTACCCTCGCACTACGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp CGCCTGTGGGCGAAGGGTAGATACTCATGTTGTCTGTaGTGTAATCCAGGAACTTGGCCCGGGCATAGCGCT +
Preference number: 6 (lower is better)
Translates to: RLWAKGRYSCCL*CNPGTWPGHSA
Trigger: AGCGCTATGCCCGGGCCAAGTTCCTGGATTACACCACAGACAACATGAGTATCTACCCTTCGCCCACAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp CAGAGGCCATCAGAATCTGCCGCACACGGTTATGGAAGCGTTGCATaGACTCATCATCCACACGCAGGAAGCACTGAGCTGTCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: QRPSESAAHGYGSVA*THHPHAGSTELSAP
Trigger: AGGAGCGGACAGCTCAGTGCTTCCTGCGTGTGGATGATGAGTCAATGCAACGCTTCCATAACCGTGTGCGGCAGATTCTGATGGCCTCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 72 bp ATGCCCACTTCCTTAAAGGCTCTCTGTGTGAGGAGGTaGCGCTTGATGCGGGACAAAGCCTCATGGGGGTTG +
Preference number: 6 (lower is better)
Translates to: MPTSLKALCVRR*RLMRDKASWGL
Trigger: CAACCCCCATGAGGCTTTGTCCCGCATCAAGCGTCACCTCCTCACACAGAGAGCCTTTAAGGAAGTGGGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp CGATCGTGGCAGCCGGTTTTTGATGTCCCAGAACACTaGCCGACCCAAGTTGACATCATGCTTCATGAGCCG +
Preference number: 6 (lower is better)
Translates to: RSWQPVFDVPEH*PTQVDIMLHEP
Trigger: CGGCTCATGAAGCATGATGTCAACTTGGGTCGGGCAGTGTTCTGGGACATCAAAAACCGGCTGCCACGATCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp AACGCAGGGTTTGCCTTCATGATCTTGGCCATGGCCTaGTGTATGAGAGGCTTGCTGCCCGGGAACCAGTTT +
Preference number: 6 (lower is better)
Translates to: NAGFAFMILAMA*CMRGLLPGNQF
Trigger: AAACTGGTTCCCGGGCAGCAAGCCTCTCATACAGCAGGCCATGGCCAAGATCATGAAGGCAAACCCTGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp TTGGTCTGCTTTTCAATCTCAGCTATCTGCTGCCGCTaGTGCGATGGCGCCGAGATCTCCATTCCCAGGATG +
Preference number: 6 (lower is better)
Translates to: LVCFSISAICCR*CDGAEISIPRM
Trigger: CATCCTGGGAATGGAGATCTCGGCGCCATCGCAGCAGCGGCAGCAGATAGCTGAGATTGAAAAGCAGACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp TGTTCCTTGGTCTGCTTTTCAATCTCAGCTATCTGCTaGCGCTGCTGCGATGGCGCCGAGATCTCCATTCCC +
Preference number: 6 (lower is better)
Translates to: CSLVCFSISAIC*RCCDGAEISIP
Trigger: GGGAATGGAGATCTCGGCGCCATCGCAGCAGCGGCAGCAGATAGCTGAGATTGAAAAGCAGACCAAGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp CAGGGGCATCCTCCTCTGGGTCCAGCTCTAGCTGAATaGCTTCCAGTGGCTCAACATCTAAGATGTTGTCGG +
Preference number: 6 (lower is better)
Translates to: QGHPPLGPALAE*LPVAQHLRCCR
Trigger: CCGACAACATCTTAGATGTTGAGCCACTGGAAGCCATTCAGCTAGAGCTGGACCCAGAGGAGGATGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp CTCAGTGGCTATGTCCTGGAAACTGAGAAAGTCATTTaGCATCTGAGGAGGCCCAGCCATCTCACTGGCCCG +
Preference number: 6 (lower is better)
Translates to: LSGYVLETEKVI*HLRRPSHLTGP
Trigger: CGGGCCAGTGAGATGGCTGGGCCTCCTCAGATGCCAAATGACTTTCTCAGTTTCCAGGACATAGCCACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp GAGCCAGAGGCCATCAGAATCTGCCGCACACGGTTATaGAAGCGTTGCATTGACTCATCATCCACACGCAGG +
Preference number: 6 (lower is better)
Translates to: EPEAIRICRTRL*KRCIDSSSTRR
Trigger: CCTGCGTGTGGATGATGAGTCAATGCAACGCTTCCATAACCGTGTGCGGCAGATTCTGATGGCCTCTGGCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp TCAGCTTCTTCCACTTCATGGACTCCTCAAAGCCACTaGCTTTCTCCCAGAACAGACCCTCCCAGGTGGGGA +
Preference number: 6 (lower is better)
Translates to: SASSTSWTPQSH*LSPRTDPPRWG
Trigger: TCCCCACCTGGGAGGGTCTGTTCTGGGAGAAAGCCAGTGGCTTTGAGGAGTCCATGAAGTGGAAGAAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp ATCCATTCCTCGTCAGTCAGCGTGGGCCAGATGTGGTaGGGTTCCGTAACAGTAGTCTTGTCTGGCTTCAGG +
Preference number: 6 (lower is better)
Translates to: IHSSSVSVGQMW*GSVTVVLSGFR
Trigger: CCTGAAGCCAGACAAGACTACTGTTACGGAACCCCACCACATCTGGCCCACGCTGACTGACGAGGAATGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp CTTTTCAATCTCAGCTATCTGCTGCCGCTGCTGCGATaGCGCCGAGATCTCCATTCCCAGGATGATGTCTCG +
Preference number: 6 (lower is better)
Translates to: LFNLSYLLPLLR*RRDLHSQDDVS
Trigger: CGAGACATCATCCTGGGAATGGAGATCTCGGCGCCATCGCAGCAGCGGCAGCAGATAGCTGAGATTGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp CAAAGTGCGACTCCACCCGCTGCTTCGTTACTGTCTTaGCCACCCCCTTTGAGTGACGGCCTTCAAACTGTC +
Preference number: 6 (lower is better)
Translates to: QSATPPAASLLS*PPPLSDGLQTV
Trigger: GACAGTTTGAAGGCCGTCACTCAAAGGGGGTGGCAAAGACAGTAACGAAGCAGCGGGTGGAGTCGCACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp TTCAGATACAGGCGAGTGAGGCGGCCCAGGTTCTTTTaGCAAACAGTCTTGTCTACAGTAGCCCCGCGACGG +
Preference number: 6 (lower is better)
Translates to: FRYRRVRRPRFF*QTVLSTVAPRR
Trigger: CCGTCGCGGGGCTACTGTAGACAAGACTGTTTGCAAAAAGAACCTGGGCCGCCTCACTCGCCTGTATCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp GATGCGGGACAAAGCCTCATGGGGGTTGTCATAGGCTaGTTCAATCAGACCCAGCTCCTCCCTCTGAGACTG +
Preference number: 6 (lower is better)
Translates to: DAGQSLMGVVIG*FNQTQLLPLRL
Trigger: CAGTCTCAGAGGGAGGAGCTGGGTCTGATTGAACAAGCCTATGACAACCCCCATGAGGCTTTGTCCCGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 90 bp ATCCGTTCACGTAACACATACAACGCAGGGTTTGCCTTCATGATCTaGGCCATGGCCTGCTGTATGAGAGGCTTGCTGCCCGGGAACCAG +
Preference number: 6 (lower is better)
Translates to: IRSRNTYNAGFAFMI*AMACCMRGLLPGNQ
Trigger: CTGGTTCCCGGGCAGCAAGCCTCTCATACAGCAGGCCATGGCCAAGATCATGAAGGCAAACCCTGCGTTGTATGTGTTACGTGAACGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp CAAGCCTGGAAGGGCAGCTGGAGCTCCGATCCTTTGATCACAATATaGGGGAAATCCAGTAAGTGGACCTCCAGAGGATCCAGCATGCCC +
Preference number: 6 (lower is better)
Translates to: QAWKGSWSSDPLITI*GKSSKWTSRGSSMP
Trigger: GGGCATGCTGGATCCTCTGGAGGTCCACTTACTGGATTTCCCCAATATTGTGATCAAAGGATCGGAGCTCCAGCTGCCCTTCCAGGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp TGCTTGATGCCTTCAGGCATCATGTCCAGAATGTCGTaGATCACAGCAGCCCTGAGCTCCAGGTCAAAGTGC +
Preference number: 6 (lower is better)
Translates to: CLMPSGIMSRMS*ITAALSSRSKC
Trigger: GCACTTTGACCTGGAGCTCAGGGCTGCTGTGATGCACGACATTCTGGACATGATGCCTGAAGGCATCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp TTGGTGAACGTGGTGGAGCCAGAGGCCATCAGAATCTaGCGCACACGGTTATGGAAGCGTTGCATTGACTCA +
Preference number: 6 (lower is better)
Translates to: LVNVVEPEAIRI*RTRLWKRCIDS
Trigger: TGAGTCAATGCAACGCTTCCATAACCGTGTGCGGCAGATTCTGATGGCCTCTGGCTCCACCACGTTCACCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp ATTCCTGAACGGAAGTGTGTGATGCCCACATCTGTCTaGTTGGACCACCTGAGGTCAGACTGGGGGATAAGC +
Preference number: 6 (lower is better)
Translates to: IPERKCVMPTSV*LDHLRSDWGIS
Trigger: GCTTATCCCCCAGTCTGACCTCAGGTGGTCCAAGCAGACAGATGTGGGCATCACACACTTCCGTTCAGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp TGGATGAGAGAGATCTTCAGTGTGGGGATCTTGCCGTaGATGAAGATTCCTGTCAGGTCCAGCTGCACCTGG +
Preference number: 6 (lower is better)
Translates to: WMREIFSVGILP*MKIPVRSSCTW
Trigger: CCAGGTGCAGCTGGACCTGACAGGAATCTTCATGCACGGCAAGATCCCCACACTGAAGATCTCTCTCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp GACTGTTCCTTGGTCTGCTTTTCAATCTCAGCTATCTaGTGCCGCTGCTGCGATGGCGCCGAGATCTCCATT +
Preference number: 6 (lower is better)
Translates to: DCSLVCFSISAI*CRCCDGAEISI
Trigger: AATGGAGATCTCGGCGCCATCGCAGCAGCGGCAGCAGATAGCTGAGATTGAAAAGCAGACCAAGGAACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp GGAATCTCGTTAACAAAGGAGATGGCTCCAGTGATGTaGTACAGCACAGGCACGTCCCGGATCTGCTCCCAA +
Preference number: 6 (lower is better)
Translates to: GISLTKEMAPVM*YSTGTSRICSQ
Trigger: TTGGGAGCAGATCCGGGACGTGCCTGTGCTGTACCACATCACTGGAGCCATCTCCTTTGTTAACGAGATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp TGGAGGTGGCTCTGTGTCAGCAGGCTTGATCCAGGGTaGGAAAAGACGGCGTTTATCTGCTTCATACCACAG +
Preference number: 6 (lower is better)
Translates to: WRWLCVSRLDPG*EKTAFICFIPQ
Trigger: CTGTGGTATGAAGCAGATAAACGCCGTCTTTTCCCACCCTGGATCAAGCCTGCTGACACAGAGCCACCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp AGTCATTTGGCATCTGAGGAGGCCCAGCCATCTCACTaGCCCGGTGCAATCCCAGTACAAGCAAATCCATCA +
Preference number: 6 (lower is better)
Translates to: SHLASEEAQPSH*PGAIPVQANPS
Trigger: TGATGGATTTGCTTGTACTGGGATTGCACCGGGCCAGTGAGATGGCTGGGCCTCCTCAGATGCCAAATGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp CCAGACCCGCTGGGAGTCAATGAACTCGCTCTCCCATaGCTGTATGTAGCGGTACAAGTTGGGAATCAGTTG +
Preference number: 6 (lower is better)
Translates to: PDPLGVNELALP*LYVAVQVGNQL
Trigger: CAACTGATTCCCAACTTGTACCGCTACATACAGCCATGGGAGAGCGAGTTCATTGACTCCCAGCGGGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp TCTTGTCTCTTGAGTGCATACTCAGCCCAGACCCGCTaGGAGTCAATGAACTCGCTCTCCCATGGCTGTATG +
Preference number: 6 (lower is better)
Translates to: SCLLSAYSAQTR*ESMNSLSHGCM
Trigger: CATACAGCCATGGGAGAGCGAGTTCATTGACTCCCAGCGGGTCTGGGCTGAGTATGCACTCAAGAGACAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp TTGATCCATTCCTCGTCAGTCAGCGTGGGCCAGATGTaGTGGGGTTCCGTAACAGTAGTCTTGTCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: LIHSSSVSVGQM*WGSVTVVLSGF
Trigger: GAAGCCAGACAAGACTACTGTTACGGAACCCCACCACATCTGGCCCACGCTGACTGACGAGGAATGGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp AGTGGGAGGGCCTGTGGACCTCATGGTAGAATTCCTTaGGGTTTGCCAGCTGCAGCTCGTATTTCATGTTGG +
Preference number: 6 (lower is better)
Translates to: SGRACGPHGRIP*GLPAAARISCW
Trigger: CCAACATGAAATACGAGCTGCAGCTGGCAAACCCCAAGGAATTCTACCATGAGGTCCACAGGCCCTCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp GGCAGATCAGGATCCTCAGTCTTGATGAACACAACGTaGGGAGTGTGGTACCAGGTCAGGTGGACGTGGTGT +
Preference number: 6 (lower is better)
Translates to: GRSGSSVLMNTT*GVWYQVRWTWC
Trigger: ACACCACGTCCACCTGACCTGGTACCACACTCCCAACGTTGTGTTCATCAAGACTGAGGATCCTGATCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp CTGAGGTGCTGCAGAATTGTCCGGGCCTTGTTCTGCTaGATGCCTTCAGGCATCATGTCCAGAATGTCGTGC +
Preference number: 6 (lower is better)
Translates to: LRCCRIVRALFC*MPSGIMSRMSC
Trigger: GCACGACATTCTGGACATGATGCCTGAAGGCATCAAGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp TCATACATCTTCTCAAACCGAGACTCCAGCATGACGTaGCACTCGCCCTCACTCGTCTCCCACACATCCTGC +
Preference number: 6 (lower is better)
Translates to: SYIFSNRDSSMT*HSPSLVSHTSC
Trigger: GCAGGATGTGTGGGAGACGAGTGAGGGCGAGTGCAACGTCATGCTGGAGTCTCGGTTTGAGAAGATGTATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp CACTGTACTGTAGTCACCGATCGTGGCAGCCGGTTTTaGATGTCCCAGAACACTGCCCGACCCAAGTTGACA +
Preference number: 6 (lower is better)
Translates to: HCTVVTDRGSRF*MSQNTARPKLT
Trigger: TGTCAACTTGGGTCGGGCAGTGTTCTGGGACATCAAAAACCGGCTGCCACGATCGGTGACTACAGTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp CGTAACACATACAACGCAGGGTTTGCCTTCATGATCTaGGCCATGGCCTGCTGTATGAGAGGCTTGCTGCCC +
Preference number: 6 (lower is better)
Translates to: RNTYNAGFAFMI*AMACCMRGLLP
Trigger: GGGCAGCAAGCCTCTCATACAGCAGGCCATGGCCAAGATCATGAAGGCAAACCCTGCGTTGTATGTGTTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp TCAGCCAAGATCAGATCCTTGAGCTGTACCTCCACCTaGATCCATTCCTCGTCAGTCAGCGTGGGCCAGATG +
Preference number: 6 (lower is better)
Translates to: SAKIRSLSCTST*IHSSSVSVGQM
Trigger: CATCTGGCCCACGCTGACTGACGAGGAATGGATCAAGGTGGAGGTACAGCTCAAGGATCTGATCTTGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp CAGGCTTCACTGAGGTGCTGCAGAATTGTCCGGGCCTTGTTCTGCTaGATGCCTTCAGGCATCATGTCCAGAATGTCGTGCATCACAGCA +
Preference number: 6 (lower is better)
Translates to: QASLRCCRIVRALFC*MPSGIMSRMSCITA
Trigger: TGCTGTGATGCACGACATTCTGGACATGATGCCTGAAGGCATCAAGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAGTGAAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 90 bp GGAAGTGGGAGGGCCTGTGGACCTCATGGTAGAATTCCTTGGGGTTaGCCAGCTGCAGCTCGTATTTCATGTTGGGATCATGTCGAACAC +
Preference number: 6 (lower is better)
Translates to: GSGRACGPHGRIPWG*PAAARISCWDHVEH
Trigger: GTGTTCGACATGATCCCAACATGAAATACGAGCTGCAGCTGGCAAACCCCAAGGAATTCTACCATGAGGTCCACAGGCCCTCCCACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 72 bp CGTTGCATTGACTCATCATCCACACGCAGGAAGCACTaGGCTGTCCGCTCCTTGGTAACCTCATTCTGTAGG +
Preference number: 6 (lower is better)
Translates to: RCIDSSSTRRKH*AVRSLVTSFCR
Trigger: CCTACAGAATGAGGTTACCAAGGAGCGGACAGCTCAGTGCTTCCTGCGTGTGGATGATGAGTCAATGCAACG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 72 bp CAGAATCTGCCGCACACGGTTATGGAAGCGTTGCATTaGCTCATCATCCACACGCAGGAAGCACTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: QNLPHTVMEALH*LIIHTQEALSC
Trigger: ACAGCTCAGTGCTTCCTGCGTGTGGATGATGAGTCAATGCAACGCTTCCATAACCGTGTGCGGCAGATTCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 72 bp CACCCAGCGCCTGAATCATGTCTGTGCGGTAGTTATTaGGGTTCCAAAGCTTGCCATCATGCCGCTGATGTG +
Preference number: 6 (lower is better)
Translates to: HPAPESCLCGSY*GSKACHHAADV
Trigger: CACATCAGCGGCATGATGGCAAGCTTTGGAACCTCAATAACTACCGCACAGACATGATTCAGGCGCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 72 bp TGCGGCACCATCACAATACAACGGATCTCCTTCACCTaGGGGTTATCTGGAGGGCTCACCCCATACAGGTAT +
Preference number: 6 (lower is better)
Translates to: CGTITIQRISFT*GLSGGLTPYRY
Trigger: ATACCTGTATGGGGTGAGCCCTCCAGATAACCCTCAGGTGAAGGAGATCCGTTGTATTGTGATGGTGCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp TTCCGCTTCTCTGCATATCGCTTGGCCTGCAACTGCTaGCATTTTCGAGCTTTCTCCTGCAGCTTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: FRFSAYRLACNC*HFRAFSCSFSS
Trigger: AGAGGAGAAGCTGCAGGAGAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAAGCGATATGCAGAGAAGCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp ACTGCAAACCATCTGCCAGCTGGAAGGCATCTACATTaGCCAAGCGATACTGCACATGGCTGTCCACAACCA +
Preference number: 6 (lower is better)
Translates to: TANHLPAGRHLH*PSDTAHGCPQP
Trigger: TGGTTGTGGACAGCCATGTGCAGTATCGCTTGGGCAATGTAGATGCCTTCCAGCTGGCAGATGGTTTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp TCACTGAGGTGCTGCAGAATTGTCCGGGCCTTGTTCTaGTTGATGCCTTCAGGCATCATGTCCAGAATGTCG +
Preference number: 6 (lower is better)
Translates to: SLRCCRIVRALF*LMPSGIMSRMS
Trigger: CGACATTCTGGACATGATGCCTGAAGGCATCAAGCAGAACAAGGCCCGGACAATTCTGCAGCACCTCAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp GGGCCTGTGGACCTCATGGTAGAATTCCTTGGGGTTTaGCAGCTGCAGCTCGTATTTCATGTTGGGATCATG +
Preference number: 6 (lower is better)
Translates to: GPVDLMVEFLGV*QLQLVFHVGIM
Trigger: CATGATCCCAACATGAAATACGAGCTGCAGCTGGCAAACCCCAAGGAATTCTACCATGAGGTCCACAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp GTAGCTTTGAAAGAACGGAACAGATACCTCTTCTTCTaGGCTTTGGGAGGCCGGTGCTTGAGGGCATTCAGC +
Preference number: 6 (lower is better)
Translates to: VALKERNRYLFF*ALGGRCLRAFS
Trigger: GCTGAATGCCCTCAAGCACCGGCCTCCCAAAGCCCAGAAGAAGAGGTATCTGTTCCGTTCTTTCAAAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp AATGCCTTGACACCACTTGTAAACAAGCAGTGGAGGTaGCTCTGTGTCAGCAGGCTTGATCCAGGGTGGGAA +
Preference number: 6 (lower is better)
Translates to: NALTPLVNKQWR*LCVSRLDPGWE
Trigger: TTCCCACCCTGGATCAAGCCTGCTGACACAGAGCCACCTCCACTGCTTGTTTACAAGTGGTGTCAAGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp AAAGCTATTCTCCCACTGTACTGTAGTCACCGATCGTaGCAGCCGGTTTTTGATGTCCCAGAACACTGCCCG +
Preference number: 6 (lower is better)
Translates to: KAILPLYCSHRS*QPVFDVPEHCP
Trigger: CGGGCAGTGTTCTGGGACATCAAAAACCGGCTGCCACGATCGGTGACTACAGTACAGTGGGAGAATAGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp GGGTGTCAGCTTGTAGGCTGTCAGTGTGCAGGAGCCTaGTGTGAAGCTGCACGTGATGATAATAGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: GCQLVGCQCAGA*CEAARDDNSLL
Trigger: GAGAAGACTATTATCATCACGTGCAGCTTCACACCAGGCTCCTGCACACTGACAGCCTACAAGCTGACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp TACTGCAAACCATCTGCCAGCTGGAAGGCATCTACATaGCCCAAGCGATACTGCACATGGCTGTCCACAACC +
Preference number: 6 (lower is better)
Translates to: YCKPSASWKAST*PKRYCTWLSTT
Trigger: GGTTGTGGACAGCCATGTGCAGTATCGCTTGGGCAATGTAGATGCCTTCCAGCTGGCAGATGGTTTGCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp CGGTTTTTGATGTCCCAGAACACTGCCCGACCCAAGTaGACATCATGCTTCATGAGCCGCATTCGGGCATCT +
Preference number: 6 (lower is better)
Translates to: RFLMSQNTARPK*TSCFMSRIRAS
Trigger: AGATGCCCGAATGCGGCTCATGAAGCATGATGTCAACTTGGGTCGGGCAGTGTTCTGGGACATCAAAAACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp TCAGAATCTGCCGCACACGGTTATGGAAGCGTTGCATaGACTCATCATCCACACGCAGGAAGCACTGAGCTG +
Preference number: 6 (lower is better)
Translates to: SESAAHGYGSVA*THHPHAGSTEL
Trigger: CAGCTCAGTGCTTCCTGCGTGTGGATGATGAGTCAATGCAACGCTTCCATAACCGTGTGCGGCAGATTCTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp GTTCGAGTCTGTGTAGCAGTGAGCTGGGACTGTTCCTaGGTCTGCTTTTCAATCTCAGCTATCTGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: VRVCVAVSWDCS*VCFSISAICCR
Trigger: GCGGCAGCAGATAGCTGAGATTGAAAAGCAGACCAAGGAACAGTCCCAGCTCACTGCTACACAGACTCGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp CTATTCTCCCACTGTACTGTAGTCACCGATCGTGGCAGCCGGTTTTaGATGTCCCAGAACACTGCCCGACCCAAGTTGACATCATGCTTC +
Preference number: 6 (lower is better)
Translates to: LFSHCTVVTDRGSRF*MSQNTARPKLTSCF
Trigger: GAAGCATGATGTCAACTTGGGTCGGGCAGTGTTCTGGGACATCAAAAACCGGCTGCCACGATCGGTGACTACAGTACAGTGGGAGAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp TCAGTCAGCGTGGGCCAGATGTGGTGGGGTTCCGTAACAGTAGTCTaGTCTGGCTTCAGGATCACCTTTGCTCTATCATTGTTCACATGC +
Preference number: 6 (lower is better)
Translates to: SVSVGQMWWGSVTVV*SGFRITFALSLFTC
Trigger: GCATGTGAACAATGATAGAGCAAAGGTGATCCTGAAGCCAGACAAGACTACTGTTACGGAACCCCACCACATCTGGCCCACGCTGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp TTGTTGACAGTTCGAGTCTGTGTAGCAGTGAGCTGGGACTGTTCCTaGGTCTGCTTTTCAATCTCAGCTATCTGCTGCCGCTGCTGCGAT +
Preference number: 6 (lower is better)
Translates to: LLTVRVCVAVSWDCS*VCFSISAICCRCCD
Trigger: ATCGCAGCAGCGGCAGCAGATAGCTGAGATTGAAAAGCAGACCAAGGAACAGTCCCAGCTCACTGCTACACAGACTCGAACTGTCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 72 bp TCTTCTCATACATCTTCTCAAACCGAGACTCCAGCATaGCGTTGCACTCGCCCTCACTCGTCTCCCACACAT +
Preference number: 6 (lower is better)
Translates to: SSHTSSQTETPA*RCTRPHSSPTH
Trigger: ATGTGTGGGAGACGAGTGAGGGCGAGTGCAACGTCATGCTGGAGTCTCGGTTTGAGAAGATGTATGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS TCA 72 bp GGATCTTCTGCCACAAGTGAGCTCGGAATATCTGGATaGGAGAGATCTTCAGTGTGGGGATCTTGCCGTGCA +
Preference number: 6 (lower is better)
Translates to: GSSATSELGISG*ERSSVWGSCRA
Trigger: TGCACGGCAAGATCCCCACACTGAAGATCTCTCTCATCCAGATATTCCGAGCTCACTTGTGGCAGAAGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 72 bp GACAAGCCTGGAAGGGCAGCTGGAGCTCCGATCCTTTaGTCACAATATTGGGGAAATCCAGTAAGTGGACCT +
Preference number: 6 (lower is better)
Translates to: DKPGRAAGAPIL*SQYWGNPVSGP
Trigger: AGGTCCACTTACTGGATTTCCCCAATATTGTGATCAAAGGATCGGAGCTCCAGCTGCCCTTCCAGGCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp AATTTCCGCTTCTCTGCATATCGCTTGGCCTGCAACTaGTGCCATTTTCGAGCTTTCTCCTGCAGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: NFRFSAYRLACN*CHFRAFSCSFS
Trigger: GGAGAAGCTGCAGGAGAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAAGCGATATGCAGAGAAGCGGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp AACCCAAATTTCCGCTTCTCTGCATATCGCTTGGCCTaGAACTGCTGCCATTTTCGAGCTTTCTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: NPNFRFSAYRLA*NCCHFRAFSCS
Trigger: GCTGCAGGAGAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAAGCGATATGCAGAGAAGCGGAAATTTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp AGGCTTGATCCAGGGTGGGAAAAGACGGCGTTTATCTaGTTCATACCACAGGTACTGGTCCAGGTAAGCATC +
Preference number: 6 (lower is better)
Translates to: RLDPGWEKTAFI*FIPQVLVQVSI
Trigger: GATGCTTACCTGGACCAGTACCTGTGGTATGAAGCAGATAAACGCCGTCTTTTCCCACCCTGGATCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp GTTCCTGGTCAAAGACCTGACACAAGTCCATCACGATaGTCTCATGGATCTTCTGCCACAAGTGAGCTCGGA +
Preference number: 6 (lower is better)
Translates to: VPGQRPDTSPSR*SHGSSATSELG
Trigger: TCCGAGCTCACTTGTGGCAGAAGATCCATGAGAGCATCGTGATGGACTTGTGTCAGGTCTTTGACCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp AAGGGCAGCTGGAGCTCCGATCCTTTGATCACAATATaGGGGAAATCCAGTAAGTGGACCTCCAGAGGATCC +
Preference number: 6 (lower is better)
Translates to: KGSWSSDPLITI*GKSSKWTSRGS
Trigger: GGATCCTCTGGAGGTCCACTTACTGGATTTCCCCAATATTGTGATCAAAGGATCGGAGCTCCAGCTGCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp AGACAAGCCTGGAAGGGCAGCTGGAGCTCCGATCCTTaGATCACAATATTGGGGAAATCCAGTAAGTGGACC +
Preference number: 6 (lower is better)
Translates to: RQAWKGSWSSDP*ITILGKSSKWT
Trigger: GGTCCACTTACTGGATTTCCCCAATATTGTGATCAAAGGATCGGAGCTCCAGCTGCCCTTCCAGGCTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp GTGGGCCAGATGTGGTGGGGTTCCGTAACAGTAGTCTaGTCTGGCTTCAGGATCACCTTTGCTCTATCATTG +
Preference number: 6 (lower is better)
Translates to: VGQMWWGSVTVV*SGFRITFALSL
Trigger: CAATGATAGAGCAAAGGTGATCCTGAAGCCAGACAAGACTACTGTTACGGAACCCCACCACATCTGGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp AGGGCCTGTGGACCTCATGGTAGAATTCCTTGGGGTTaGCCAGCTGCAGCTCGTATTTCATGTTGGGATCAT +
Preference number: 6 (lower is better)
Translates to: RACGPHGRIPWG*PAAARISCWDH
Trigger: ATGATCCCAACATGAAATACGAGCTGCAGCTGGCAAACCCCAAGGAATTCTACCATGAGGTCCACAGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp CTGGTACGGCACTTAGGCAGGATGCGGCACTCAAAGCCACACATGTaGAATAGCAGGTTGGGGTTGTCTTTACTGTACACAGACACAAAG +
Preference number: 6 (lower is better)
Translates to: LVRHLGRMRHSKPHM*NSRLGLSLLYTDTK
Trigger: CTTTGTGTCTGTGTACAGTAAAGACAACCCCAACCTGCTATTCAACATGTGTGGCTTTGAGTGCCGCATCCTGCCTAAGTGCCGTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 72 bp TGCAGCCCTACCTCCACCCAGTCCAGCTTGGTGGACTaGAAGAATTTGGTAGCTTTGAAAGAACGGAACAGA +
Preference number: 6 (lower is better)
Translates to: CSPTSTQSSLVD*KNLVALKERNR
Trigger: TCTGTTCCGTTCTTTCAAAGCTACCAAATTCTTTCAGTCCACCAAGCTGGACTGGGTGGAGGTAGGGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS TCA 72 bp AAGCCAATGTGTGCCGGTCTTTCTGGAAGAGGGTATTaGTCCGGGGAATGCCTCGATCCCATGAATCTTCTA +
Preference number: 6 (lower is better)
Translates to: KPMCAGLSGRGY*SGECLDPMNLL
Trigger: TAGAAGATTCATGGGATCGAGGCATTCCCCGGATCAATACCCTCTTCCAGAAAGACCGGCACACATTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp CTTCTGAGCATCCACAAACCCAAATTTCCGCTTCTCTaGATATCGCTTGGCCTGCAACTGCTGCCATTTTCG +
Preference number: 6 (lower is better)
Translates to: LLSIHKPKFPLL*ISLGLQLLPFS
Trigger: CGAAAATGGCAGCAGTTGCAGGCCAAGCGATATGCAGAGAAGCGGAAATTTGGGTTTGTGGATGCTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp GTAATTGGATGTCAATCCAATACTTCTGTGTGGTGGTaGTGTCCATCACATCCTTGGAGTCTGCCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: VIGCQSNTSVWW*CPSHPWSLPAA
Trigger: CGCTGCTGGCAGACTCCAAGGATGTGATGGACAGCACCACCACACAGAAGTATTGGATTGACATCCAATTAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp CCACAAACCCAAATTTCCGCTTCTCTGCATATCGCTTaGCCTGCAACTGCTGCCATTTTCGAGCTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: PQTQISASLHIA*PATAAIFELSP
Trigger: AGGAGAAAGCTCGAAAATGGCAGCAGTTGCAGGCCAAGCGATATGCAGAGAAGCGGAAATTTGGGTTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp GTCTCCATGGTCTCGAATGATCTTCCTGACATGTTCTaGTGGCATGTCTTCCTTCTGAGCATCCACAAACCC +
Preference number: 6 (lower is better)
Translates to: VSMVSNDLPDMF*WHVFLLSIHKP
Trigger: GGGTTTGTGGATGCTCAGAAGGAAGACATGCCACCAGAACATGTCAGGAAGATCATTCGAGACCATGGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp GAGAGGTGTATCCTTCAGGAAGGGCTCGACAAACTCTaGGAGTTCAAACTCTTCATCATCATCAGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: ERCILQEGLDKL*EFKLFIIIRQW
Trigger: CCACTGCCTGATGATGATGAAGAGTTTGAACTCCCAGAGTTTGTCGAGCCCTTCCTGAAGGATACACCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp CCAAGCGATACTGCACATGGCTGTCCACAACCAGCTTaGTTAAACGCAGTACTTCCCGACATAGATGGAAAG +
Preference number: 6 (lower is better)
Translates to: PSDTAHGCPQPA*LNAVLPDIDGK
Trigger: CTTTCCATCTATGTCGGGAAGTACTGCGTTTAACCAAGCTGGTTGTGGACAGCCATGTGCAGTATCGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp CCCAGCGTAATTGGATGTCAATCCAATACTTCTGTGTaGTGGTGCTGTCCATCACATCCTTGGAGTCTGCCA +
Preference number: 6 (lower is better)
Translates to: PSVIGCQSNTSV*WCCPSHPWSLP
Trigger: TGGCAGACTCCAAGGATGTGATGGACAGCACCACCACACAGAAGTATTGGATTGACATCCAATTACGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp AACTTCTCCACCTTGAGACAAGCCTGGAAGGGCAGCTaGAGCTCCGATCCTTTGATCACAATATTGGGGAAA +
Preference number: 6 (lower is better)
Translates to: NFSTLRQAWKGS*SSDPLITILGK
Trigger: TTTCCCCAATATTGTGATCAAAGGATCGGAGCTCCAGCTGCCCTTCCAGGCTTGTCTCAAGGTGGAGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp CACAATACAACGGATCTCCTTCACCTGAGGGTTATCTaGAGGGCTCACCCCATACAGGTATCCTGCAATTTG +
Preference number: 6 (lower is better)
Translates to: HNTTDLLHLRVI*RAHPIQVSCNL
Trigger: CAAATTGCAGGATACCTGTATGGGGTGAGCCCTCCAGATAACCCTCAGGTGAAGGAGATCCGTTGTATTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp CCCAAGCGATACTGCACATGGCTGTCCACAACCAGCTaGGTTAAACGCAGTACTTCCCGACATAGATGGAAA +
Preference number: 6 (lower is better)
Translates to: PKRYCTWLSTTS*VKRSTSRHRWK
Trigger: TTTCCATCTATGTCGGGAAGTACTGCGTTTAACCAAGCTGGTTGTGGACAGCCATGTGCAGTATCGCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp TCCTTGCACATGCGGATCTGCCGCATCAGCTTATATTaGTATCGATACATGCCTGTCAACTGTCCCACGTGG +
Preference number: 6 (lower is better)
Translates to: SLHMRICRISLY*YRYMPVNCPTW
Trigger: CCACGTGGGACAGTTGACAGGCATGTATCGATACAAATATAAGCTGATGCGGCAGATCCGCATGTGCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp AATATCTGGATGAGAGAGATCTTCAGTGTGGGGATCTaGCCGTGCATGAAGATTCCTGTCAGGTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: NIWMREIFSVGI*PCMKIPVRSSC
Trigger: GCAGCTGGACCTGACAGGAATCTTCATGCACGGCAAGATCCCCACACTGAAGATCTCTCTCATCCAGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp GGCTCAGTGGGCTCAGATGAATACAGCTGTAATCCTTaGCGTATCCGTTCACGTAACACATACAACGCAGGG +
Preference number: 6 (lower is better)
Translates to: GSVGSDEYSCNP*RIRSRNTYNAG
Trigger: CCCTGCGTTGTATGTGTTACGTGAACGGATACGCAAAGGATTACAGCTGTATTCATCTGAGCCCACTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp CGCTTCTGTCCAGCCCATACAGATGTGTGGATTATCTaGAGGAACAGCTGTCCCGTTCGTGGATTGAAGATG +
Preference number: 6 (lower is better)
Translates to: RFCPAHTDVWII*RNSCPVRGLKM
Trigger: CATCTTCAATCCACGAACGGGACAGCTGTTCCTCAAGATAATCCACACATCTGTATGGGCTGGACAGAAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp CTAGTGGTTGAAGTGATAATCTCGTCACCGTGCTTGTaGACAGTTCGAGTCTGTGTAGCAGTGAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LVVEVIISSPCL*TVRVCVAVSWD
Trigger: GTCCCAGCTCACTGCTACACAGACTCGAACTGTCAACAAGCACGGTGACGAGATTATCACTTCAACCACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp CAGTCGGTAGAGTGTGGACATCATAGGCAATGTGAACTGCCAGCGTaGGTAGGTGGAACCATTAACGTACTTCCTACTGTCTCTCAAAGG +
Preference number: 6 (lower is better)
Translates to: QSVECGHHRQCELPA*VGGTINVLPTVSQR
Trigger: CCTTTGAGAGACAGTAGGAAGTACGTTAATGGTTCCACCTACCAACGCTGGCAGTTCACATTGCCTATGATGTCCACACTCTACCGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 90 bp TCTACATTGCCCAAGCGATACTGCACATGGCTGTCCACAACCAGCTaGGTTAAACGCAGTACTTCCCGACATAGATGGAAAGCATTCCCA +
Preference number: 6 (lower is better)
Translates to: STLPKRYCTWLSTTS*VKRSTSRHRWKAFP
Trigger: TGGGAATGCTTTCCATCTATGTCGGGAAGTACTGCGTTTAACCAAGCTGGTTGTGGACAGCCATGTGCAGTATCGCTTGGGCAATGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 90 bp TCAATCTTCTCATACATCTTCTCAAACCGAGACTCCAGCATGACGTaGCACTCGCCCTCACTCGTCTCCCACACATCCTGCAGGTTATTA +
Preference number: 6 (lower is better)
Translates to: SIFSYIFSNRDSSMT*HSPSLVSHTSCRLL
Trigger: TAATAACCTGCAGGATGTGTGGGAGACGAGTGAGGGCGAGTGCAACGTCATGCTGGAGTCTCGGTTTGAGAAGATGTATGAGAAGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp ATGCCTGTCAACTGTCCCACGTGGGCAAATATATACTaGAAACCATCTGCCAGCTGGAAGGCATCTACATTG +
Preference number: 6 (lower is better)
Translates to: MPVNCPTWANIY*KPSASWKASTL
Trigger: CAATGTAGATGCCTTCCAGCTGGCAGATGGTTTGCAGTATATATTTGCCCACGTGGGACAGTTGACAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp GCGATCAATGTATCTACAGAAGAGTCGGATTGGGTGTaGAGCCTCAGTGGCTATGTCCTGGAAACTGAGAAA +
Preference number: 6 (lower is better)
Translates to: AINVSTEESDWV*SLSGYVLETEK
Trigger: TTTCTCAGTTTCCAGGACATAGCCACTGAGGCTGCACACCCAATCCGACTCTTCTGTAGATACATTGATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS GCA 72 bp GCTCAGTGGGCTCAGATGAATACAGCTGTAATCCTTTaGGTATCCGTTCACGTAACACATACAACGCAGGGT +
Preference number: 6 (lower is better)
Translates to: AQWAQMNTAVIL*VSVHVTHTTQG
Trigger: ACCCTGCGTTGTATGTGTTACGTGAACGGATACGCAAAGGATTACAGCTGTATTCATCTGAGCCCACTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp GTTGGGAGTGTGGTACCAGGTCAGGTGGACGTGGTGTaGAAGGTTGTTATACAGGTAAGGAAAAGCAATCTT +
Preference number: 6 (lower is better)
Translates to: VGSVVPGQVDVV*KVVIQVRKSNL
Trigger: AAGATTGCTTTTCCTTACCTGTATAACAACCTTCCACACCACGTCCACCTGACCTGGTACCACACTCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp ATGGATGCGATCAATGTATCTACAGAAGAGTCGGATTaGGTGTGCAGCCTCAGTGGCTATGTCCTGGAAACT +
Preference number: 6 (lower is better)
Translates to: MDAINVSTEESD*VCSLSGYVLET
Trigger: AGTTTCCAGGACATAGCCACTGAGGCTGCACACCCAATCCGACTCTTCTGTAGATACATTGATCGCATCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp ACTCGCTCTCCCATGGCTGTATGTAGCGGTACAAGTTaGGAATCAGTTGGTCTTCTTCATGACTCATTCCTG +
Preference number: 6 (lower is better)
Translates to: TRSPMAVCSGTS*ESVGLLHDSFL
Trigger: CAGGAATGAGTCATGAAGAAGACCAACTGATTCCCAACTTGTACCGCTACATACAGCCATGGGAGAGCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp CTGGAAGCCCACATAGACATTGGCTCGATTGATGGTTaGGGACCACCAGAGGGTAAATCTACGATTAGGAAT +
Preference number: 6 (lower is better)
Translates to: LEAHIDIGSIDG*GPPEGKSTIRN
Trigger: ATTCCTAATCGTAGATTTACCCTCTGGTGGTCCCCAACCATCAATCGAGCCAATGTCTATGTGGGCTTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp CCAGATGTGGTGGGGTTCCGTAACAGTAGTCTTGTCTaGCTTCAGGATCACCTTTGCTCTATCATTGTTCAC +
Preference number: 6 (lower is better)
Translates to: PDVVGFRNSSLV*LQDHLCSIIVH
Trigger: GTGAACAATGATAGAGCAAAGGTGATCCTGAAGCCAGACAAGACTACTGTTACGGAACCCCACCACATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp TGCTTGTTGACAGTTCGAGTCTGTGTAGCAGTGAGCTaGGACTGTTCCTTGGTCTGCTTTTCAATCTCAGCT +
Preference number: 6 (lower is better)
Translates to: CLLTVRVCVAVS*DCSLVCFSISA
Trigger: AGCTGAGATTGAAAAGCAGACCAAGGAACAGTCCCAGCTCACTGCTACACAGACTCGAACTGTCAACAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp GCACGTGATGATAATAGTCTTCTCCCCATCCCAAGATaGGTTGTCAGCCATGATTTTGGCATGAGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: ARDDNSLLPIPR*VVSHDFGMSGD
Trigger: GTCACCACTCATGCCAAAATCATGGCTGACAACCCATCTTGGGATGGGGAGAAGACTATTATCATCACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp GAGTGTGGACATCATAGGCAATGTGAACTGCCAGCGTaGGTAGGTGGAACCATTAACGTACTTCCTACTGTC +
Preference number: 6 (lower is better)
Translates to: ECGHHRQCELPA*VGGTINVLPTV
Trigger: GACAGTAGGAAGTACGTTAATGGTTCCACCTACCAACGCTGGCAGTTCACATTGCCTATGATGTCCACACTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp TCCTGTAAGTTGATGTCTCGAACAAGAGGCTCAAATTaGGGTCCCCCAGGAATGGCCATGTTGAGTGCCTTA +
Preference number: 6 (lower is better)
Translates to: SCKLMSRTRGSN*GPPGMAMLSAL
Trigger: TAAGGCACTCAACATGGCCATTCCTGGGGGACCCAAATTTGAGCCTCTTGTTCGAGACATCAACTTACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp TATGGATGCGATCAATGTATCTACAGAAGAGTCGGATaGGGTGTGCAGCCTCAGTGGCTATGTCCTGGAAAC +
Preference number: 6 (lower is better)
Translates to: YGCDQCIYRRVG*GVQPQWLCPGN
Trigger: GTTTCCAGGACATAGCCACTGAGGCTGCACACCCAATCCGACTCTTCTGTAGATACATTGATCGCATCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp CACTTAGGCAGGATGCGGCACTCAAAGCCACACATGTaGAATAGCAGGTTGGGGTTGTCTTTACTGTACACA +
Preference number: 6 (lower is better)
Translates to: HLGRMRHSKPHM*NSRLGLSLLYT
Trigger: TGTGTACAGTAAAGACAACCCCAACCTGCTATTCAACATGTGTGGCTTTGAGTGCCGCATCCTGCCTAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp TGTCCCGTTCGTGGATTGAAGATGAAGATGGCCCCATaGATGGGTTTAGTTGTCAAGTTCCCCTCAAAGGTC +
Preference number: 6 (lower is better)
Translates to: CPVRGLKMKMAP*MGLVVKFPSKV
Trigger: GACCTTTGAGGGGAACTTGACAACTAAACCCATCAATGGGGCCATCTTCATCTTCAATCCACGAACGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp TTGCTAGTGGTTGAAGTGATAATCTCGTCACCGTGCTaGTTGACAGTTCGAGTCTGTGTAGCAGTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LLVVEVIISSPC*LTVRVCVAVSW
Trigger: CCAGCTCACTGCTACACAGACTCGAACTGTCAACAAGCACGGTGACGAGATTATCACTTCAACCACTAGCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp TTAGGCAGGATGCGGCACTCAAAGCCACACATGTTGAATAGCAGGTaGGGGTTGTCTTTACTGTACACAGACACAAAGCTATTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: LGRMRHSKPHMLNSR*GLSLLYTDTKLFSH
Trigger: GTGGGAGAATAGCTTTGTGTCTGTGTACAGTAAAGACAACCCCAACCTGCTATTCAACATGTGTGGCTTTGAGTGCCGCATCCTGCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp AGGAACAGCTGTCCCGTTCGTGGATTGAAGATGAAGATGGCCCCATaGATGGGTTTAGTTGTCAAGTTCCCCTCAAAGGTCTTGTGGATA +
Preference number: 6 (lower is better)
Translates to: RNSCPVRGLKMKMAP*MGLVVKFPSKVLWI
Trigger: TATCCACAAGACCTTTGAGGGGAACTTGACAACTAAACCCATCAATGGGGCCATCTTCATCTTCAATCCACGAACGGGACAGCTGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp CAGTCTTCATCCTGTAAGTTGATGTCTCGAACAAGAGGCTCAAATTaGGGTCCCCCAGGAATGGCCATGTTGAGTGCCTTAGAGGTAAAA +
Preference number: 6 (lower is better)
Translates to: QSSSCKLMSRTRGSN*GPPGMAMLSALEVK
Trigger: TTTTACCTCTAAGGCACTCAACATGGCCATTCCTGGGGGACCCAAATTTGAGCCTCTTGTTCGAGACATCAACTTACAGGATGAAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 90 bp ACAACAGGCGGGAACCGGCTAGGCATCTTGGAGTTCAATCCAATCTaGATACGTGTCTGGATCTTGTTTTCACACTTCACCAATAAGTCC +
Preference number: 6 (lower is better)
Translates to: TTGGNRLGILEFNPI*IRVWILFSHFTNKS
Trigger: GGACTTATTGGTGAAGTGTGAAAACAAGATCCAGACACGTATCAAGATTGGATTGAACTCCAAGATGCCTAGCCGGTTCCCGCCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 72 bp TCCATCACGATGCTCTCATGGATCTTCTGCCACAAGTaGGCTCGGAATATCTGGATGAGAGAGATCTTCAGT +
Preference number: 6 (lower is better)
Translates to: SITMLSWIFCHK*ARNIWMREIFS
Trigger: ACTGAAGATCTCTCTCATCCAGATATTCCGAGCTCACTTGTGGCAGAAGATCCATGAGAGCATCGTGATGGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp GGCTTCAGGATCACCTTTGCTCTATCATTGTTCACATaGAAAGCCCGCAGAATCAGAATGAGACGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: GFRITFALSLFT*KARRIRMRREK
Trigger: TTTCTCCCGTCTCATTCTGATTCTGCGGGCTTTGCATGTGAACAATGATAGAGCAAAGGTGATCCTGAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp CTTAACGTACCGAAGAATCATATTCTCTATAGGTGTTaGCAGTCCTGGGACCTTCCAAGGGATGTTGGCCTT +
Preference number: 6 (lower is better)
Translates to: LNVPKNHILYRC*QSWDLPRDVGL
Trigger: AAGGCCAACATCCCTTGGAAGGTCCCAGGACTGCCAACACCTATAGAGAATATGATTCTTCGGTACGTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp AGATACTCATGTTGTCTGTGGTGTAATCCAGGAACTTaGCCCGGGCATAGCGCTCAATATCATGGGAATCAT +
Preference number: 6 (lower is better)
Translates to: RYSCCLWCNPGT*PGHSAQYHGNH
Trigger: ATGATTCCCATGATATTGAGCGCTATGCCCGGGCCAAGTTCCTGGATTACACCACAGACAACATGAGTATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp TGTGTGGATTATCTTGAGGAACAGCTGTCCCGTTCGTaGATTGAAGATGAAGATGGCCCCATTGATGGGTTT +
Preference number: 6 (lower is better)
Translates to: CVDYLEEQLSRS*IEDEDGPIDGF
Trigger: AAACCCATCAATGGGGCCATCTTCATCTTCAATCCACGAACGGGACAGCTGTTCCTCAAGATAATCCACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp TGGAAAGCATTCCCAAAACGGGATTTCTTTCTTTCCTaGGTGGTGAGCGTCTTGACAGGCTTCAGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: WKAFPKRDFFLS*VVSVLTGFRLK
Trigger: CTTCAACCTGAAGCCTGTCAAGACGCTCACCACCAAGGAAAGAAAGAAATCCCGTTTTGGGAATGCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp GGGAACCGGCTAGGCATCTTGGAGTTCAATCCAATCTaGATACGTGTCTGGATCTTGTTTTCACACTTCACC +
Preference number: 6 (lower is better)
Translates to: GNRLGILEFNPI*IRVWILFSHFT
Trigger: GGTGAAGTGTGAAAACAAGATCCAGACACGTATCAAGATTGGATTGAACTCCAAGATGCCTAGCCGGTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp TGTTTCAAGTCCTTGCACATGCGGATCTGCCGCATCAGCTTATATTaGTATCGATACATGCCTGTCAACTGTCCCACGTGGGCAAATATA +
Preference number: 6 (lower is better)
Translates to: CFKSLHMRICRISLY*YRYMPVNCPTWANI
Trigger: TATATTTGCCCACGTGGGACAGTTGACAGGCATGTATCGATACAAATATAAGCTGATGCGGCAGATCCGCATGTGCAAGGACTTGAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 90 bp GGAAGAGTTCATCTTATAGGACTTTCGGGGATGGATTGTCTCCTTTaGCACTGTCTCAATTTCCAGTGCATCCAGTTCCTGGTCAAAGAC +
Preference number: 6 (lower is better)
Translates to: GRVHLIGLSGMDCLL*HCLNFQCIQFLVKD
Trigger: GTCTTTGACCAGGAACTGGATGCACTGGAAATTGAGACAGTGCAAAAGGAGACAATCCATCCCCGAAAGTCCTATAAGATGAACTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp TATCCGCACAGGAAGAGTTCATCTTATAGGACTTTCGGGGATGGATaGTCTCCTTTTGCACTGTCTCAATTTCCAGTGCATCCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: YPHRKSSSYRTFGDG*SPFALSQFPVHPVP
Trigger: AGGAACTGGATGCACTGGAAATTGAGACAGTGCAAAAGGAGACAATCCATCCCCGAAAGTCCTATAAGATGAACTCTTCCTGTGCGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp ACAGATGTGTGGATTATCTTGAGGAACAGCTGTCCCGTTCGTGGATaGAAGATGAAGATGGCCCCATTGATGGGTTTAGTTGTCAAGTTC +
Preference number: 6 (lower is better)
Translates to: TDVWIILRNSCPVRG*KMKMAPLMGLVVKF
Trigger: GAACTTGACAACTAAACCCATCAATGGGGCCATCTTCATCTTCAATCCACGAACGGGACAGCTGTTCCTCAAGATAATCCACACATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 90 bp GTAACAGTAGTCTTGTCTGGCTTCAGGATCACCTTTGCTCTATCATaGTTCACATGCAAAGCCCGCAGAATCAGAATGAGACGGGAGAAA +
Preference number: 6 (lower is better)
Translates to: VTVVLSGFRITFALS*FTCKARRIRMRREK
Trigger: TTTCTCCCGTCTCATTCTGATTCTGCGGGCTTTGCATGTGAACAATGATAGAGCAAAGGTGATCCTGAAGCCAGACAAGACTACTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp CGTAACAGTAGTCTTGTCTGGCTTCAGGATCACCTTTaGTCTATCATTGTTCACATGCAAAGCCCGCAGAAT +
Preference number: 6 (lower is better)
Translates to: RNSSLVWLQDHL*SIIVHMQSPQN
Trigger: ATTCTGCGGGCTTTGCATGTGAACAATGATAGAGCAAAGGTGATCCTGAAGCCAGACAAGACTACTGTTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp TATTTGTATCGATACATGCCTGTCAACTGTCCCACGTaGGCAAATATATACTGCAAACCATCTGCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: YLYRYMPVNCPT*ANIYCKPSASW
Trigger: CCAGCTGGCAGATGGTTTGCAGTATATATTTGCCCACGTGGGACAGTTGACAGGCATGTATCGATACAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CAA 72 bp ATGCGGCACTCAAAGCCACACATGTTGAATAGCAGGTaGGGGTTGTCTTTACTGTACACAGACACAAAGCTA +
Preference number: 6 (lower is better)
Translates to: MRHSKPHMLNSR*GLSLLYTDTKL
Trigger: TAGCTTTGTGTCTGTGTACAGTAAAGACAACCCCAACCTGCTATTCAACATGTGTGGCTTTGAGTGCCGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp GTCTTGTCTGGCTTCAGGATCACCTTTGCTCTATCATaGTTCACATGCAAAGCCCGCAGAATCAGAATGAGA +
Preference number: 6 (lower is better)
Translates to: VLSGFRITFALS*FTCKARRIRMR
Trigger: TCTCATTCTGATTCTGCGGGCTTTGCATGTGAACAATGATAGAGCAAAGGTGATCCTGAAGCCAGACAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS TCA 72 bp AATCTACGATTAGGAATCTGGTTTAATCCTGATCGCTaGGCATTGGTCAGCTTCTTCCACTTCATGGACTCC +
Preference number: 6 (lower is better)
Translates to: NLRLGIWFNPDR*ALVSFFHFMDS
Trigger: GGAGTCCATGAAGTGGAAGAAGCTGACCAATGCTCAGCGATCAGGATTAAACCAGATTCCTAATCGTAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS GCA 72 bp GGATCTGCCGCATCAGCTTATATTTGTATCGATACATaGCTGTCAACTGTCCCACGTGGGCAAATATATACT +
Preference number: 6 (lower is better)
Translates to: GSAASAYICIDT*LSTVPRGQIYT
Trigger: AGTATATATTTGCCCACGTGGGACAGTTGACAGGCATGTATCGATACAAATATAAGCTGATGCGGCAGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp ACCAGCTTGGTTAAACGCAGTACTTCCCGACATAGATaGAAAGCATTCCCAAAACGGGATTTCTTTCTTTCC +
Preference number: 6 (lower is better)
Translates to: TSLVKRSTSRHR*KAFPKRDFFLS
Trigger: GGAAAGAAAGAAATCCCGTTTTGGGAATGCTTTCCATCTATGTCGGGAAGTACTGCGTTTAACCAAGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp GTACTGGTCCAGGTAAGCATCAGTTATTTTCTCCAGTaGTTCCACATCATACACTGGTACAAGGTGGCTATA +
Preference number: 6 (lower is better)
Translates to: VLVQVSISYFLQ*FHIIHWYKVAI
Trigger: TATAGCCACCTTGTACCAGTGTATGATGTGGAACCACTGGAGAAAATAACTGATGCTTACCTGGACCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
ENSMUST00000131283.3
CDS CCA 72 bp GGCATCTTGGAGTTCAATCCAATCTTGATACGTGTCTaGATCTTGTTTTCACACTTCACCAATAAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: GILEFNPILIRV*ILFSHFTNKSR
Trigger: CCTGGACTTATTGGTGAAGTGTGAAAACAAGATCCAGACACGTATCAAGATTGGATTGAACTCCAAGATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CAA 72 bp AGGAAGAGTTCATCTTATAGGACTTTCGGGGATGGATaGTCTCCTTTTGCACTGTCTCAATTTCCAGTGCAT +
Preference number: 6 (lower is better)
Translates to: RKSSSYRTFGDG*SPFALSQFPVH
Trigger: ATGCACTGGAAATTGAGACAGTGCAAAAGGAGACAATCCATCCCCGAAAGTCCTATAAGATGAACTCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8
CDS CCA 72 bp ATTTCTTGTTATTGTAGCCAACAATGTTTTCATTGTTaGGGTCTGGGTGTTCTGTCAGGTAACGCTGGATCA +
Preference number: 6 (lower is better)
Translates to: ISCYCSQQCFHC*GLGVLSGNAGS
Trigger: TGATCCAGCGTTACCTGACAGAACACCCAGACCCCAACAATGAAAACATTGTTGGCTACAATAACAAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000018449.11
ENSMUST00000102510.8