Pregenerated sensors for PRPF4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021413Ensembl transcript IDs: ENSMUST00000077853.5, ENSMUST00000220965.2, ENSMUST00000221077.2, ENSMUST00000222509.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCTCCACTCCAAGCGTGCTGAGGTTACAGGTGTGGCTAGCACATaGAACTTGCAGGTTATTTTCAAATGTACACTAACCTGGCAGCTA | + |
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Preference number: 1 (lower is better) Translates to: CLHSKRAEVTGVAST*NLQVIFKCTLTWQL Trigger: TAGCTGCCAGGTTAGTGTACATTTGAAAATAACCTGCAAGTTGCATGTGCTAGCCACACCTGTAACCTCAGCACGCTTGGAGTGGAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR CCA 90 bp | TGCGCCCGTGATGCCTTGTTTAAAAGGCCTCACTCTACCTGTAGCTaGAAACTGCCGTGTGTTTATTTTAGTAAGTCTAACCATGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: CARDALFKRPHSTCS*KLPCVYFSKSNHEE Trigger: CTCCTCATGGTTAGACTTACTAAAATAAACACACGGCAGTTTCCAGCTACAGGTAGAGTGAGGCCTTTTAAACAAGGCATCACGGGCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR TCA 90 bp | CCCCCAGATGTTACTGTCCTCCCTAATCCTCAGGGAGACAAACAGTaGGTTGACCCACTCCCAAACAGTAAAGATTACACAGGATTTAAA | + |
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Preference number: 1 (lower is better) Translates to: PPDVTVLPNPQGDKQ*VDPLPNSKDYTGFK Trigger: TTTAAATCCTGTGTAATCTTTACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTCCCTGAGGATTAGGGAGGACAGTAACATCTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR TCA 90 bp | GACAGAAACCTTGGCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTaGTCTGCACCTAAAACACAAAGAACAAGTAACAAGCAACTTTGT | + |
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Preference number: 1 (lower is better) Translates to: DRNLGSCLLAAVIFQ*SAPKTQRTSNKQLC Trigger: ACAAAGTTGCTTGTTACTTGTTCTTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGCCAAGGTTTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR CCA 90 bp | GGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCTATCACCTTCCTaGCTGTGTAGTTCATTTCATGTCTTTAAATGGAGCATAACCCAC | + |
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Preference number: 1 (lower is better) Translates to: GCRFRGGLLSHLSPS*LCSSFHVFKWSITH Trigger: GTGGGTTATGCTCCATTTAAAGACATGAAATGAACTACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACCTCTGAACCTACACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR CCA 90 bp | CATCTATCACCTTCCTGGCTGTGTAGTTCATTTCATGTCTTTAAATaGAGCATAACCCACCAGGAGAATGCTGCTATTCTGATATTCCAT | + |
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Preference number: 1 (lower is better) Translates to: HLSPSWLCSSFHVFK*SITHQENAAILIFH Trigger: ATGGAATATCAGAATAGCAGCATTCTCCTGGTGGGTTATGCTCCATTTAAAGACATGAAATGAACTACACAGCCAGGAAGGTGATAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR TCA 90 bp | ACACATGTAATTCCTTTGTTTCATTTCCGAGTCTATTTCTCCCTATaGTGCCAGAGTAGACTAGAAGAAATGCAAATCTGGGGCCAAAAT | + |
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Preference number: 1 (lower is better) Translates to: THVIPLFHFRVYFSL*CQSRLEEMQIWGQN Trigger: ATTTTGGCCCCAGATTTGCATTTCTTCTAGTCTACTCTGGCATCATAGGGAGAAATAGACTCGGAAATGAAACAAAGGAATTACATGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTCTTCAGAAGAACAGTCCCTTACCCTTGGCTCATGTCTTCTGGCTGCCGGACTCCCTTCGGCACTaGCTACACCAAGGGCATGCT | + |
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Preference number: 2 (lower is better) Translates to: MALQKNSPLPLAHVFWLPDSLRH*LHQGHA Trigger: AGCATGCCCTTGGTGTAGTCAGTGCCGAAGGGAGTC...CGGCAGCCAGAAGACATGAGCCAAGGGTAAGGGACTGTTCTTCTGAAGAGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCGACTCCCTTCGGCACTaGCTACACCAAGGGCATGCT | + |
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Preference number: 2 (lower is better) Translates to: SASPEDFSANQKHERRSVDSLRH*LHQGHA Trigger: AGCATGCCCTTGGTGTAGTCAGTGCCGAAGGGAGTC...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | CTGACTGTACGATCGTACAGCCTTAATATGGAGACCGACATCCTTACCATATTTCACGCACAACATTGCTaGACACACCCTGCCCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LTVRSYSLNMETDILTIFHAQHC*THPAQC Trigger: ACACTGGGCAGGGTGTGTTCAGCAATGTTGTGCGTG...AAATATGGTAAGGATGTCGGTCTCCATATTAAGGCTGTACGATCGTACAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCCTCATGTCTTCTGGCTaGCGTCATCTTCCAGTGATC | + |
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Preference number: 2 (lower is better) Translates to: SASPEDFSANQKHERRSVLMSSG*RHLPVI Trigger: GATCACTGGAAGATGACGGCAGCCAGAAGACATGAG...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGCTCTTCAGAAGAACAGTCCCTTACCCTTGGCTCATGTCTTCTGGCTGCCGATGTTGTACACAACCTaGTTTAAAAGAGGAGACATC | + |
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Preference number: 2 (lower is better) Translates to: MALQKNSPLPLAHVFWLPMLYTT*FKRGDI Trigger: GATGTCTCCTCTTTTAAAGCAGGTTGTGTACAACAT...CGGCAGCCAGAAGACATGAGCCAAGGGTAAGGGACTGTTCTTCTGAAGAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAACACTCTACCTGTAGCTaGAAACTGCCGTGTGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKHSTCS*KLPCVY Trigger: ATAAACACACGGCAGTTTCCAGCTACAGGTAGAGTG...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTCTTCAGAAGAACAGTCCCTTACCCTTGGCTCATGTCTTCTGGCTGCCGCCGGATCATCTTATTTaGCATTTTTCCTTTAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: MALQKNSPLPLAHVFWLPPDHLI*HFSFKV Trigger: GACCTTAAAGGAAAAATGCCAAATAAGATGATCCGG...CGGCAGCCAGAAGACATGAGCCAAGGGTAAGGGACTGTTCTTCTGAAGAGCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
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| 3UTR-3UTR TCA 90 bp | CTGACTGTACGATCGTACAGCCTTAATATGGAGACCGACATCCTTACCATATTTTGTGGTAAAAGTGTCTaGAGAGGCGCAGGCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: LTVRSYSLNMETDILTIFCGKSV*RGAGNG Trigger: TCCATTGCCTGCGCCTCTTCAGACACTTTTACCACA...AAATATGGTAAGGATGTCGGTCTCCATATTAAGGCTGTACGATCGTACAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTAACCATGAGGAGACGGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCACATGCAGGGAATTCTaGCACAAAGCTATCCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: KSNHEETGVGSEVVYYLITCREF*HKAIPH Trigger: ATGAGGGATAGCTTTGTGGCAGAATTCCCTGCATGT...GATGAGATAATAAACCACCTCTGAACCTACACCCGTCTCCTCATGGTTAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR GCA 90 bp | ATGGGCACAACAGCACTGTTCTTATACCACAGCAATGAAACCCAAACTGTAACGACGGCCCACTTCCCATaGAGAACAATCTTCTCATTA | + |
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Preference number: 2 (lower is better) Translates to: MGTTALFLYHSNETQTVTTAHFP*RTIFSL Trigger: TAATGAGAAGATTGTTCTGCATGGGAAGTGGGCCGT...CGTTACAGTTTGGGTTTCATTGCTGTGGTATAAGAACAGTGCTGTTGTGCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR CCA 90 bp | GAGACGGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCTATCACCTTCCTGGCTTTCATGTCTTTAAATaGAGCATAACCCACCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ETGVGSEVVYYLIYHLPGFHVFK*SITHQE Trigger: CTCCTGGTGGGTTATGCTCCATTTAAAGACATGAAA...GCCAGGAAGGTGATAGATGAGATAATAAACCACCTCTGAACCTACACCCGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR CCA 90 bp | CTGACTGTACGATCGTACAGCCTTAATATGGAGACCGACATCCTTACCATATTTAAGAGGCGCAGGCAATaGAACTTGTCATCAGGATCA | + |
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Preference number: 2 (lower is better) Translates to: LTVRSYSLNMETDILTIFKRRRQ*NLSSGS Trigger: TGATCCTGATGACAAGTTCCATTGCCTGCGCCTCTT...AAATATGGTAAGGATGTCGGTCTCCATATTAAGGCTGTACGATCGTACAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAAGAAATAAGGCTATACTaGGTTACATCTTTAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKEIRLY*VTSLAG Trigger: ACCTGCTAAAGATGTAACTCAGTATAGCCTTATTTC...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAAAGAATGCTGCTATTCTaGTATTCCATTCTTGAATGC | + |
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Preference number: 2 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKRMLLF*YSILEC Trigger: GCATTCAAGAATGGAATATCAGAATAGCAGCATTCT...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAAGAATGCACCAAAATGTaGATGCTTGTTGTAATTAGG | + |
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Preference number: 2 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKECTKM*MLVVIR Trigger: CCTAATTACAACAAGCATGCACATTTTGGTGCATTC...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTAACCATGAGGAGACGGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCAACCCACCAGGAGAATaGTGCTATTCTGATATTCCA | + |
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Preference number: 2 (lower is better) Translates to: KSNHEETGVGSEVVYYLINPPGE*CYSDIP Trigger: TGGAATATCAGAATAGCAGCATTCTCCTGGTGGGTT...GATGAGATAATAAACCACCTCTGAACCTACACCCGTCTCCTCATGGTTAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCAGGGAGACAAACAGTGAGTTGACCCACTCCCAAACAGTAAAGATTACATATTTACAGTTTACCTaGCTTACCAGCACTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: ILRETNSELTHSQTVKITYLQFT*LTSTED Trigger: GTCTTCAGTGCTGGTAAGTCAGGTAAACTGTAAATA...TGTAATCTTTACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTCCCTGAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCACATTAGTTAAATCCTaGGTTAGACCCCATAACCTA | + |
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Preference number: 2 (lower is better) Translates to: SASPEDFSANQKHERRSVTLVKS*VRPHNL Trigger: TAGGTTATGGGGTCTAACTCAGGATTTAACTAATGT...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | CACAACTGCAAACTCTACCTCAGTGACATTACCACATCAAACAGAAGGACGTTTCTTATACCACAGCAATaGAACCCAAACTGTAACGCT | + |
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Preference number: 2 (lower is better) Translates to: HNCKLYLSDITTSNRRTFLIPQQ*NPNCNA Trigger: AGCGTTACAGTTTGGGTTTCATTGCTGTGGTATAAG...AAACGTCCTTCTGTTTGATGTGGTAATGTCACTGAGGTAGAGTTTGCAGTTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAATATTCCATTCTTGAATaGACCAAAATGTGCATGCTT | + |
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Preference number: 2 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKYSILE*TKMCML Trigger: AAGCATGCACATTTTGGTGCATTCAAGAATGGAATA...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | CACAACTGCAAACTCTACCTCAGTGACATTACCACATCAAACAGAAGGACGTTTCCTAGGCTACTTTTATaGTTTAGGCACCTGCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: HNCKLYLSDITTSNRRTFPRLLL*FRHLLK Trigger: TTTAAGCAGGTGCCTAAATCATAAAAGTAGCCTAGG...AAACGTCCTTCTGTTTGATGTGGTAATGTCACTGAGGTAGAGTTTGCAGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR GCA 90 bp | ATCCTCAGGGAGACAAACAGTGAGTTGACCCACTCCCAAACAGTAAAGATTACAATGTTGTACACAACCTaGTTTAAAAGAGGAGACATC | + |
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Preference number: 2 (lower is better) Translates to: ILRETNSELTHSQTVKITMLYTT*FKRGDI Trigger: GATGTCTCCTCTTTTAAAGCAGGTTGTGTACAACAT...TGTAATCTTTACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTCCCTGAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR CCA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAATTGGCTCATGTCTTCTaGCTGCCGTCATCTTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PNATIRRYCHISLYNLIQLAHVF*LPSSSS Trigger: ACTGGAAGATGACGGCAGCCAGAAGACATGAGCCAA...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR CCA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAAATGGGACAGAAACCTTaGCTCATGTCTTCTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PNATIRRYCHISLYNLIQMGQKP*LMSSGC Trigger: GCAGCCAGAAGACATGAGCCAAGGTTTCTGTCCCAT...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | CACAACTGCAAACTCTACCTCAGTGACATTACCACATCAAACAGAAGGACGTTTTCTCATTACAGTAAGTaGGTGTCAACTGTTTATGCA | + |
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Preference number: 2 (lower is better) Translates to: HNCKLYLSDITTSNRRTFSHYSK*VSTVYA Trigger: TGCATAAACAGTTGACACTCACTTACTGTAATGAGA...AAACGTCCTTCTGTTTGATGTGGTAATGTCACTGAGGTAGAGTTTGCAGTTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAAGCCGTCATCTTCCAGTaGTCTGCACCTAAAACACAA | + |
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Preference number: 2 (lower is better) Translates to: PNATIRRYCHISLYNLIQAVIFQ*SAPKTQ Trigger: TTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGC...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACCTTTTACCTATAACTTaGACAACCAAGAGCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: FRIILFGIFPLRSMASFNLLPIT*TTKSSL Trigger: AAGACTGCTCTTGGTTGTTCAAGTTATAGGTAAAAG...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAGTTCATTTCATGTCCTGATATTCCATTCTTaGATGCACCAAAATGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: GGLLSHLSPSWLCSSFHVLIFHS*MHQNVH Trigger: ATGCACATTTTGGTGCATTCAAGAATGGAATATCAG...GACATGAAATGAACTACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR TCA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAAAGCAAGCAAAAGCTTTaGAGGCATAAGATGAACTGT | + |
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Preference number: 2 (lower is better) Translates to: PNATIRRYCHISLYNLIQSKQKL*RHKMNC Trigger: ACAGTTCATCTTATGCCTTCAAAGCTTTTGCTTGCT...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR CCA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAAAAACAGCATTTATGCTaGCCATTGTATCTGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PNATIRRYCHISLYNLIQKQHLC*PLYLKS Trigger: GCTCTTCAGATACAATGGCCAGCATAAATGCTGTTT...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR TCA 72 bp | CTGCTCCTCTTCAGAACTGCCCAAGTCCCTCATATCTaGAGGTCCTGGAGAACAAGTCTGCCAAGAGGCCTA | + |
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Preference number: 3 (lower is better) Translates to: LLLFRTAQVPHI*RSWRTSLPRGL Trigger: TAGGCCTCTTGGCAGACTTGTTCTCCAGGACCTTCAGATATGAGGGACTTGGGCAGTTCTGAAGAGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR CAA 90 bp | ATGGGCACAACAGCACTGTTCTTATACCACAGCAATGAAACCCAAACTGTAACGAGCAAATCAGACCCCTaGGAGAAGGCGTCGAATGGC | + |
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Preference number: 3 (lower is better) Translates to: MGTTALFLYHSNETQTVTSKSDP*EKASNG Trigger: GCCATTCGACGCCTTCTCCAAGGGGTCTGATTTGCT...CGTTACAGTTTGGGTTTCATTGCTGTGGTATAAGAACAGTGCTGTTGTGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR GCA 72 bp | ACAAACACCGGAAGGTCCTCGTTTCTAACAGAATGCTaGTCCTCTTCAGAACTGCCCAAGTCCCTCATATCT | + |
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Preference number: 3 (lower is better) Translates to: TNTGRSSFLTEC*SSSELPKSLIS Trigger: AGATATGAGGGACTTGGGCAGTTCTGAAGAGGAGCAGCATTCTGTTAGAAACGAGGACCTTCCGGTGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR CCA 72 bp | TCTGCCTCCACTCCAAGCGTGCTGAGGTTACAGGTGTaGCTAGCACATGCAACTTGCAGGTTATTTTCAAAT | + |
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Preference number: 3 (lower is better) Translates to: SASTPSVLRLQV*LAHATCRLFSN Trigger: ATTTGAAAATAACCTGCAAGTTGCATGTGCTAGCCACACCTGTAACCTCAGCACGCTTGGAGTGGAGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR GCA 72 bp | AATACAAACACCGGAAGGTCCTCGTTTCTAACAGAATaGTGCTCCTCTTCAGAACTGCCCAAGTCCCTCATA | + |
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Preference number: 3 (lower is better) Translates to: NTNTGRSSFLTE*CSSSELPKSLI Trigger: TATGAGGGACTTGGGCAGTTCTGAAGAGGAGCAGCATTCTGTTAGAAACGAGGACCTTCCGGTGTTTGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR TCA 72 bp | GTTACTGTCCTCCCTAATCCTCAGGGAGACAAACAGTaGGTTGACCCACTCCCAAACAGTAAAGATTACACA | + |
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Preference number: 3 (lower is better) Translates to: VTVLPNPQGDKQ*VDPLPNSKDYT Trigger: TGTGTAATCTTTACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTCCCTGAGGATTAGGGAGGACAGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR GCA 72 bp | TCCAAGCGTGCTGAGGTTACAGGTGTGGCTAGCACATaGAACTTGCAGGTTATTTTCAAATGTACACTAACC | + |
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Preference number: 3 (lower is better) Translates to: SKRAEVTGVAST*NLQVIFKCTLT Trigger: GGTTAGTGTACATTTGAAAATAACCTGCAAGTTGCATGTGCTAGCCACACCTGTAACCTCAGCACGCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR CCA 72 bp | ATCTTTTATGGGACAGAAACCTTGGCTCATGTCTTCTaGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: IFYGTETLAHVF*LPSSSSDLHLK Trigger: TTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGCCAAGGTTTCTGTCCCATAAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR-3UTR CAA 90 bp | CACAACTGCAAACTCTACCTCAGTGACATTACCACATCAAACAGAAGGACGTTTGAGACAAACAGTGAGTaGACCCACTCCCAAACAGTA | + |
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Preference number: 3 (lower is better) Translates to: HNCKLYLSDITTSNRRTFETNSE*THSQTV Trigger: TACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTC...AAACGTCCTTCTGTTTGATGTGGTAATGTCACTGAGGTAGAGTTTGCAGTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| 3UTR TCA 72 bp | GATGGGCACAACAGCACTGTTCTTATACCACAGCAATaGAACCCAAACTGTAACGCTGAAACTACAAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: DGHNSTVLIPQQ*NPNCNAETTSQ Trigger: CTGACTTGTAGTTTCAGCGTTACAGTTTGGGTTTCATTGCTGTGGTATAAGAACAGTGCTGTTGTGCCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| 3UTR TCA 72 bp | ATGAACGCAGGTCTGTCCAATAGGATCATTCACAACTaGCCTCAACCTAAGAGAGGTCTTACACAACTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: MNAGLSNRIIHN*PQPKRGLTQLQ Trigger: TTGCAGTTGTGTAAGACCTCTCTTAGGTTGAGGTCAGTTGTGAATGATCCTATTGGACAGACCTGCGTTCAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| 3UTR-3UTR CAA 90 bp | CACAACTGCAAACTCTACCTCAGTGACATTACCACATCAAACAGAAGGACGTTTAACATACACAATCCTTaGTGTCGCAAAACCAAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: HNCKLYLSDITTSNRRTFNIHNP*CRKTKP Trigger: CGGCTTGGTTTTGCGACACAAAGGATTGTGTATGTT...AAACGTCCTTCTGTTTGATGTGGTAATGTCACTGAGGTAGAGTTTGCAGTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| 3UTR GCA 72 bp | ACAACTGACCTCAACCTAAGAGAGGTCTTACACAACTaGAAACTCTACCTCAGTGACATTACCACATCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TTDLNLREVLHN*KLYLSDITTSN Trigger: GTTTGATGTGGTAATGTCACTGAGGTAGAGTTTGCAGTTGTGTAAGACCTCTCTTAGGTTGAGGTCAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| 3UTR CCA 72 bp | TGCAGGAACTATGATATACAAGGAGCACTTTACAGATaGGCACAACAGCACTGTTCTTATACCACAGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: CRNYDIQGALYR*AQQHCSYTTAM Trigger: CATTGCTGTGGTATAAGAACAGTGCTGTTGTGCCCATCTGTAAAGTGCTCCTTGTATATCATAGTTCCTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| 3UTR CCA 72 bp | GATGCCTTGTTTAAAAGGCCTCACTCTACCTGTAGCTaGAAACTGCCGTGTGTTTATTTTAGTAAGTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: DALFKRPHSTCS*KLPCVYFSKSN Trigger: GTTAGACTTACTAAAATAAACACACGGCAGTTTCCAGCTACAGGTAGAGTGAGGCCTTTTAAACAAGGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| 3UTR GCA 72 bp | CTAAACTTGCTTTTTACTTTCGAGGAAGGCTGTAGCTaGAGGAACTATGATATACAAGGAGCACTTTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LNLLFTFEEGCS*RNYDIQGALYR Trigger: TCTGTAAAGTGCTCCTTGTATATCATAGTTCCTGCAGCTACAGCCTTCCTCGAAAGTAAAAAGCAAGTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| 3UTR TCA 72 bp | ATTCCTTTGTTTCATTTCCGAGTCTATTTCTCCCTATaGTGCCAGAGTAGACTAGAAGAAATGCAAATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: IPLFHFRVYFSL*CQSRLEEMQIW Trigger: CCAGATTTGCATTTCTTCTAGTCTACTCTGGCATCATAGGGAGAAATAGACTCGGAAATGAAACAAAGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| 3UTR-3UTR CAA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAATCTGATATTCCATTCTaGAATGCACCAAAATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PNATIRRYCHISLYNLIQSDIPF*NAPKCA Trigger: TGCACATTTTGGTGCATTCAAGAATGGAATATCAGA...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| 3UTR GCA 72 bp | TATAAGAGCCACAAAATATTACCTATAGGGCCCAAATaGTACCATAAGGAGATATTGTCACATCTCACTATA | + |
|
Preference number: 3 (lower is better) Translates to: YKSHKILPIGPK*YHKEILSHLTI Trigger: TATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGGGCCCTATAGGTAATATTTTGTGGCTCTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR TCA 90 bp | ATGGCTCTTCAGAAGAACAGTCCCTTACCCTTGGCTCATGTCTTCTGGCTGCCGTGTGGTAAAAGTGTCTaGAGAGGCGCAGGCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: MALQKNSPLPLAHVFWLPCGKSV*RGAGNG Trigger: TCCATTGCCTGCGCCTCTTCAGACACTTTTACCACA...CGGCAGCCAGAAGACATGAGCCAAGGGTAAGGGACTGTTCTTCTGAAGAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCTGCTGCTCTGGGGGCTaGTTGGCTCAGATGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SASPEDFSANQKHERRSVCCSGG*LAQMAQ Trigger: CTGTGCCATCTGAGCCAAGCAGCCCCCAGAGCAGCA...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | ATGGCTCTTCAGAAGAACAGTCCCTTACCCTTGGCTCATGTCTTCTGGCTGCCGTCACAACTACCTTCATaGCACCTGAGGAGGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MALQKNSPLPLAHVFWLPSQLPS*HLRRRM Trigger: CATCCTCCTCCTCAGGTGGCATGAAGGTAGTTGTGA...CGGCAGCCAGAAGACATGAGCCAAGGGTAAGGGACTGTTCTTCTGAAGAGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR CCA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAACCTGCTGCGTCTCAATaGGGAACGGGACCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKPAASQ*GTGPPS Trigger: AGAAGGAGGTCCCGTTCCCCATTGAGACGCAGCAGG...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR TCA 90 bp | ATCCTCAGGGAGACAAACAGTGAGTTGACCCACTCCCAAACAGTAAAGATTACACCTTCTCCTCAAGCGTaGCCTGCTCCTTCGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ILRETNSELTHSQTVKITPSPQA*PAPSAP Trigger: AGGAGCCGAAGGAGCAGGTCACGCTTGAGGAGAAGG...TGTAATCTTTACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTCCCTGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR TCA 90 bp | ATGGCTCTTCAGAAGAACAGTCCCTTACCCTTGGCTCATGTCTTCTGGCTGCCGTACTCTTGCTCGACATaGCCAAGACTCCTGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: MALQKNSPLPLAHVFWLPYSCST*PRLLSQ Trigger: TTGTGACAGGAGTCTTGGTCATGTCGAGCAAGAGTA...CGGCAGCCAGAAGACATGAGCCAAGGGTAAGGGACTGTTCTTCTGAAGAGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR GCA 90 bp | GAGACGGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCTATCACCTTCCTGGCGAGATCGTGATCTTGTaGTGCTCTGGGGGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETGVGSEVVYYLIYHLPGEIVIL*CSGGCL Trigger: CAAGCAGCCCCCAGAGCAGCACAAGATCACGATCTC...GCCAGGAAGGTGATAGATGAGATAATAAACCACCTCTGAACCTACACCCGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACTGCTGCTCTGGGGGCTaGTTGGCTCAGATGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FRIILFGIFPLRSMASFNCCSGG*LAQMAQ Trigger: CTGTGCCATCTGAGCCAAGCAGCCCCCAGAGCAGCA...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR CCA 90 bp | GAGACGGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTCCGATCTGTGCCTaGTCCGTTCTTTGGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETGVGSEVVYYLIYHLPGCPICA*SVLWIC Trigger: GCAGATCCAAAGAACGGACCAGGCACAGATCGGACA...GCCAGGAAGGTGATAGATGAGATAATAAACCACCTCTGAACCTACACCCGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCTTCCCCACTTTCTCTTaGGACCGCCGTCTGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SASPEDFSANQKHERRSVFPTFS*DRRLSG Trigger: TCCACTCAGACGGCGGTCCCAAGAGAAAGTGGGGAA...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR TCA 90 bp | CACAACTGCAAACTCTACCTCAGTGACATTACCACATCAAACAGAAGGACGTTTTGGCGAAGGAGATCGTaGTCTTGTGCTGCTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HNCKLYLSDITTSNRRTFWRRRS*SCAALG Trigger: CCCCAGAGCAGCACAAGATCACGATCTCCTTCGCCA...AAACGTCCTTCTGTTTGATGTGGTAATGTCACTGAGGTAGAGTTTGCAGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR TCA 90 bp | AAGTCTAACCATGAGGAGACGGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCGCCAGGAACAACTGCTaGCTGTACGATCGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSNHEETGVGSEVVYYLIARNNC*LYDRTA Trigger: GGCTGTACGATCGTACAGTCAGCAGTTGTTCCTGGC...GATGAGATAATAAACCACCTCTGAACCTACACCCGTCTCCTCATGGTTAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | GGTGTAGGTTCAGAGGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAATCGTGATCTTGTGCTaGTCTGGGGGCTGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVGSEVVYYLIYHLPGCVIVILC*SGGCLA Trigger: AGCCAAGCAGCCCCCAGAGCAGCACAAGATCACGAT...TACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACCTCTGAACCTACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCCCTCAGCAGGAGATCTaGCCTTCCCCACTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SASPEDFSANQKHERRSVPQQEI*PSPLSL Trigger: AAGAGAAAGTGGGGAAGGCCAGATCTCCTGCTGAGG...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | AAGTCTAACCATGAGGAGACGGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCGCTCTGGGGGCTGCTTaGCTCAGATGGCACAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: KSNHEETGVGSEVVYYLIALGAA*LRWHRY Trigger: ATATCTGTGCCATCTGAGCCAAGCAGCCCCCAGAGC...GATGAGATAATAAACCACCTCTGAACCTACACCCGTCTCCTCATGGTTAGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | GGTGTAGGTTCAGAGGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAGATCTTGTGCTGCTCTaGGGGCTGCTTGGCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVGSEVVYYLIYHLPGCVDLVLL*GLLGSD Trigger: ATCTGAGCCAAGCAGCCCCCAGAGCAGCACAAGATC...TACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACCTCTGAACCTACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCCATAGCCTTGCAAAATaGGCCCCATTCCAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SASPEDFSANQKHERRSVHSLAK*APFQTG Trigger: TCCAGTCTGGAATGGGGCTCATTTTGCAAGGCTATG...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR TCA 90 bp | ATGGCTCTTCAGAAGAACAGTCCCTTACCCTTGGCTCATGTCTTCTGGCTGCCGGCCAAAATCTTCTTCTaGGATGAGCCATTATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MALQKNSPLPLAHVFWLPAKIFF*DEPLFC Trigger: ACAGAATAATGGCTCATCTCAGAAGAAGATTTTGGC...CGGCAGCCAGAAGACATGAGCCAAGGGTAAGGGACTGTTCTTCTGAAGAGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR TCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACCACGCACAACATTGCTaGACACACCCTGCCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRIILFGIFPLRSMASFNHAQHC*THPAQC Trigger: ACACTGGGCAGGGTGTGTTCAGCAATGTTGTGCGTG...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR TCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACGCCAGGAACAACTGCTaGCTGTACGATCGTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRIILFGIFPLRSMASFNARNNC*LYDRTA Trigger: GGCTGTACGATCGTACAGTCAGCAGTTGTTCCTGGC...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR GCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACATCGTGATCTTGTGCTaGTCTGGGGGCTGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRIILFGIFPLRSMASFNIVILC*SGGCLA Trigger: AGCCAAGCAGCCCCCAGAGCAGCACAAGATCACGAT...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR GCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACGAGATCGTGATCTTGTaGTGCTCTGGGGGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FRIILFGIFPLRSMASFNEIVIL*CSGGCL Trigger: CAAGCAGCCCCCAGAGCAGCACAAGATCACGATCTC...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACGCTCTGGGGGCTGCTTaGCTCAGATGGCACAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: FRIILFGIFPLRSMASFNALGAA*LRWHRY Trigger: ATATCTGTGCCATCTGAGCCAAGCAGCCCCCAGAGC...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACGATCTTGTGCTGCTCTaGGGGCTGCTTGGCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FRIILFGIFPLRSMASFNDLVLL*GLLGSD Trigger: ATCTGAGCCAAGCAGCCCCCAGAGCAGCACAAGATC...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTCAGGGAGACAAACAGTGAGTTGACCCACTCCCAAACAGTAAAGATTACATGTGGTAAAAGTGTCTaGAGAGGCGCAGGCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILRETNSELTHSQTVKITCGKSV*RGAGNG Trigger: TCCATTGCCTGCGCCTCTTCAGACACTTTTACCACA...TGTAATCTTTACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTCCCTGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAACCTGTTCCCATTTCTTaGCTTTTCGTGAATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKPVPIS*LFVNLS Trigger: GGAGAGATTCACGAAAAGGCAAGAAATGGGAACAGG...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCGCCTGGTCCGTTCTTTaGATCTGCTCTTACTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SASPEDFSANQKHERRSVAWSVL*ICSYFV Trigger: AACGAAGTAAGAGCAGATCCAAAGAACGGACCAGGC...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAATTGACTTCCGCTCTTTaGACCTTGACCTTCTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKLTSAL*TLTFCL Trigger: AAGACAGAAGGTCAAGGTCCAAAGAGCGGAAGTCAA...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | GGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAGTTCATTTCATGTCCTTGGCCCTTCTGCCTaGAGACAGAGTTCGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLLSHLSPSWLCSSFHVLGPSA*RQSSRR Trigger: CCTTCTCGAACTCTGTCTCCAGGCAGAAGGGCCAAG...GACATGAAATGAACTACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| 3UTR CAA 72 bp | CGTGCTGAGGTTACAGGTGTGGCTAGCACATGCAACTaGCAGGTTATTTTCAAATGTACACTAACCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAEVTGVASTCN*QVIFKCTLTWQ Trigger: CTGCCAGGTTAGTGTACATTTGAAAATAACCTGCAAGTTGCATGTGCTAGCCACACCTGTAACCTCAGCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | ATCCTCAGGGAGACAAACAGTGAGTTGACCCACTCCCAAACAGTAAAGATTACACTTTTGTCCGATCTGTaGCTGGTCCGTTCTTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILRETNSELTHSQTVKITLLSDL*LVRSLD Trigger: ATCCAAAGAACGGACCAGGCACAGATCGGACAAAAG...TGTAATCTTTACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTCCCTGAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | ATGGCTCTTCAGAAGAACAGTCCCTTACCCTTGGCTCATGTCTTCTGGCTGCCGATATTTCTGCACAATTaGTTGCCTCTGTATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MALQKNSPLPLAHVFWLPIFLHN*LPLYSS Trigger: AGAAGAATACAGAGGCAAGCAATTGTGCAGAAATAT...CGGCAGCCAGAAGACATGAGCCAAGGGTAAGGGACTGTTCTTCTGAAGAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR GCA 90 bp | CTGACTGTACGATCGTACAGCCTTAATATGGAGACCGACATCCTTACCATATTTCATCATTTCCTTCTCTaGCTCCCTGTCCATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTVRSYSLNMETDILTIFHHFLL*LPVHGD Trigger: GTCTCCATGGACAGGGAGGCAGAGAAGGAAATGATG...AAATATGGTAAGGATGTCGGTCTCCATATTAAGGCTGTACGATCGTACAGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGCACAACAGCACTGTTCTTATACCACAGCAATGAAACCCAAACTGTAACGAAGAGGCGCAGGCAATaGAACTTGTCATCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: MGTTALFLYHSNETQTVTKRRRQ*NLSSGS Trigger: TGATCCTGATGACAAGTTCCATTGCCTGCGCCTCTT...CGTTACAGTTTGGGTTTCATTGCTGTGGTATAAGAACAGTGCTGTTGTGCCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | CTGACTGTACGATCGTACAGCCTTAATATGGAGACCGACATCCTTACCATATTTCTGCCTCCCTGTCCATaGAGACATTTGTACCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTVRSYSLNMETDILTIFLPPCP*RHLYPY Trigger: GTAAGGGTACAAATGTCTCCATGGACAGGGAGGCAG...AAATATGGTAAGGATGTCGGTCTCCATATTAAGGCTGTACGATCGTACAGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
||
| CDS-3UTR TCA 90 bp | GAGACGGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCTATCACCTTCCTGGCCGACTGTGTTTATTTTaGGATTGGTCTTCTGATACC | + |
|
Preference number: 4 (lower is better) Translates to: ETGVGSEVVYYLIYHLPGRLCLF*DWSSDT Trigger: GGTATCAGAAGACCAATCTCAAAATAAACACAGTCG...GCCAGGAAGGTGATAGATGAGATAATAAACCACCTCTGAACCTACACCCGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACAAGAGGCGCAGGCAATaGAACTTGTCATCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: FRIILFGIFPLRSMASFNKRRRQ*NLSSGS Trigger: TGATCCTGATGACAAGTTCCATTGCCTGCGCCTCTT...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR TCA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAACACGCACAACATTGCTaGACACACCCTGCCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PNATIRRYCHISLYNLIQHAQHC*THPAQC Trigger: ACACTGGGCAGGGTGTGTTCAGCAATGTTGTGCGTG...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | GGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAGTTCATTTCATGTCTCCTCTCCTTGGACTTaGTCCTGTTTGCTTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGLLSHLSPSWLCSSFHVSSPWT*SCLLSL Trigger: GAGAGAAAGCAAACAGGAGCAAGTCCAAGGAGAGGA...GACATGAAATGAACTACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAATGTAAACATGTCAGGTaGCAAAATCTTCTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKCKHVR*QNLLLR Trigger: TCTCAGAAGAAGATTTTGGCACCTGACATGTTTACA...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR TCA 90 bp | GGTGTAGGTTCAGAGGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTATTTCTAGCTTGGTCTTaGGACTTGCTTCTTTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVGSEVVYYLIYHLPGCVFLAWS*DLLLLD Trigger: ATCCAAAAGAAGCAAGTCTCAAGACCAAGCTAGAAA...TACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACCTCTGAACCTACACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | CACAACTGCAAACTCTACCTCAGTGACATTACCACATCAAACAGAAGGACGTTTAAGCTTAGTTCTTTTTaGAGGGGACAGGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HNCKLYLSDITTSNRRTFKLSSF*RGQAFF Trigger: AAAGAAGGCCTGTCCCCTGCAAAAAGAACTAAGCTT...AAACGTCCTTCTGTTTGATGTGGTAATGTCACTGAGGTAGAGTTTGCAGTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAAATATTTCTGCACAATTaGTTGCCTCTGTATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKIFLHN*LPLYSS Trigger: AGAAGAATACAGAGGCAAGCAATTGTGCAGAAATAT...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCCTTGTCTCGCAGTTTTaGAGACAAACTTCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SASPEDFSANQKHERRSVLVSQF*RQTSSF Trigger: AAAAGAAGAAGTTTGTCTCCAAAACTGCGAGACAAG...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | GGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAGTTCATTTCATGTCGGACCTCCTTCTAATTaGAGACCTACTTCTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GGLLSHLSPSWLCSSFHVGPPSN*RPTSSS Trigger: CGAAGAAGAAGTAGGTCTCCAATTAGAAGGAGGTCC...GACATGAAATGAACTACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR TCA 90 bp | CACAACTGCAAACTCTACCTCAGTGACATTACCACATCAAACAGAAGGACGTTTGCCAAAATCTTCTTCTaGGATGAGCCATTATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HNCKLYLSDITTSNRRTFAKIFF*DEPLFC Trigger: ACAGAATAATGGCTCATCTCAGAAGAAGATTTTGGC...AAACGTCCTTCTGTTTGATGTGGTAATGTCACTGAGGTAGAGTTTGCAGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR TCA 90 bp | ATGGGCACAACAGCACTGTTCTTATACCACAGCAATGAAACCCAAACTGTAACGCAAAATGTTGATCTTTaGATACACCTTTCCGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: MGTTALFLYHSNETQTVTQNVDL*IHLSGS Trigger: TGATCCGGAAAGGTGTATTCAAAGATCAACATTTTG...CGTTACAGTTTGGGTTTCATTGCTGTGGTATAAGAACAGTGCTGTTGTGCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | ATCCTCAGGGAGACAAACAGTGAGTTGACCCACTCCCAAACAGTAAAGATTACATCATTAGATTATGCTTaGCTTTTACTGAGGCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILRETNSELTHSQTVKITSLDYA*LLLRPQ Trigger: TTGAGGCCTCAGTAAAAGCCAAGCATAATCTAATGA...TGTAATCTTTACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTCCCTGAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | ATCCTCAGGGAGACAAACAGTGAGTTGACCCACTCCCAAACAGTAAAGATTACATCCTATCCTTTATTTTaGCTTTCTCTTCACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILRETNSELTHSQTVKITSYPLF*LSLHSS Trigger: TGAAGAGTGAAGAGAAAGGCAAAATAAAGGATAGGA...TGTAATCTTTACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTCCCTGAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR GCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACTGTAAACATGTCAGGTaGCAAAATCTTCTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FRIILFGIFPLRSMASFNCKHVR*QNLLLR Trigger: TCTCAGAAGAAGATTTTGGCACCTGACATGTTTACA...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAATGGAAGACCTGGTACTaGACCTGTTCCCATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PNATIRRYCHISLYNLIQWKTWY*TCSHFL Trigger: CAAGAAATGGGAACAGGTCCAGTACCAGGTCTTCCA...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CCA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACTCATTAGATTATGCTTaGCTTTTACTGAGGCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FRIILFGIFPLRSMASFNSLDYA*LLLRPQ Trigger: TTGAGGCCTCAGTAAAAGCCAAGCATAATCTAATGA...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR CCA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAACCGGATCATCTTATTTaGCATTTTTCCTTTAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PNATIRRYCHISLYNLIQPDHLI*HFSFKV Trigger: GACCTTAAAGGAAAAATGCCAAATAAGATGATCCGG...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS GCA 90 bp | CTCGCTCCAAGATGTCGTCTGGCGAAGGAGATCGTGATCTTGTGCTaGTCTGGGGGCTGCTTGGCTCAGATGGCACAGATATATTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LAPRCRLAKEIVILC*SGGCLAQMAQIYCY Trigger: ATAGCAATATATCTGTGCCATCTGAGCCAAGCAGCCCCCAGAGCAGCACAAGATCACGATCTCCTTCGCCAGACGACATCTTGGAGCGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077853.5 ENSMUST00000220965.2 ENSMUST00000222509.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCTCTAAGGATCGGCTCTaGGCCCTTCTGCCTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SASPEDFSANQKHERRSVSKDRL*ALLPGD Trigger: GTCTCCAGGCAGAAGGGCCAAGAGCCGATCCTTAGA...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACAAGGAGATCGTGATCTaGTGCTGCTCTGGGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FRIILFGIFPLRSMASFNKEIVI*CCSGGC Trigger: GCAGCCCCCAGAGCAGCACAAGATCACGATCTCCTT...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAGTTCATTTCATGTCAAGGAGATCGTGATCTaGTGCTGCTCTGGGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGLLSHLSPSWLCSSFHVKEIVI*CCSGGC Trigger: GCAGCCCCCAGAGCAGCACAAGATCACGATCTCCTT...GACATGAAATGAACTACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | AAGTCTAACCATGAGGAGACGGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCTGCCTGGTCCGTTCTTaGGATCTGCTCTTACTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KSNHEETGVGSEVVYYLICLVRS*DLLLLR Trigger: ACGAAGTAAGAGCAGATCCAAAGAACGGACCAGGCA...GATGAGATAATAAACCACCTCTGAACCTACACCCGTCTCCTCATGGTTAGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAATGGACTTGCTCCTGTTaGCTTTCTCTCTCAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKWTCSC*LSLSAF Trigger: AAATGCTGAGAGAGAAAGCAAACAGGAGCAAGTCCA...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS TCA 90 bp | TGCCTCCCTGTCCATGGAGACATTTGTACCCTTACCACACAGGCATaGAATGTAGTAACATTCACTGGCTGTACTAGGTTGAGCATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: CLPVHGDICTLTTQA*NVVTFTGCTRLSIK Trigger: TTTGATGCTCAACCTAGTACAGCCAGTGAATGTTACTACATTTCATGCCTGTGTGGTAAGGGTACAAATGTCTCCATGGACAGGGAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
||
| CDS-3UTR CAA 90 bp | TCAGCTTCCCCTGAAGACTTTTCAGCTAATCAGAAACATGAACGCAGGTCTGTCCAATTTCAGATCGTTTaGACTTCCGCTCTTTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SASPEDFSANQKHERRSVQFQIV*TSALWT Trigger: GGTCCAAAGAGCGGAAGTCAAAACGATCTGAAATTG...GACAGACCTGCGTTCATGTTTCTGATTAGCTGAAAAGTCTTCAGGGGAAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| CDS-3UTR CAA 90 bp | CTGACTGTACGATCGTACAGCCTTAATATGGAGACCGACATCCTTACCATATTTTGTCCATGGAGACATTaGTACCCTTACCACACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTVRSYSLNMETDILTIFCPWRH*YPYHTG Trigger: GCCTGTGTGGTAAGGGTACAAATGTCTCCATGGACA...AAATATGGTAAGGATGTCGGTCTCCATATTAAGGCTGTACGATCGTACAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGCACAACAGCACTGTTCTTATACCACAGCAATGAAACCCAAACTGTAACGACCTGTTCCCATTTCTaGCCTTTTCGTGAATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MGTTALFLYHSNETQTVTTCSHF*PFRESL Trigger: GAGAGATTCACGAAAAGGCAAGAAATGGGAACAGGT...CGTTACAGTTTGGGTTTCATTGCTGTGGTATAAGAACAGTGCTGTTGTGCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | GGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAGTTCATTTCATGTCCTCCTCTCCTTGGACTaGCTCCTGTTTGCTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGLLSHLSPSWLCSSFHVLLSLD*LLFAFS Trigger: AGAGAAAGCAAACAGGAGCAAGTCCAAGGAGAGGAG...GACATGAAATGAACTACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
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| CDS-3UTR CAA 90 bp | CTGACTGTACGATCGTACAGCCTTAATATGGAGACCGACATCCTTACCATATTTAGACGAGCACTCGATTaGCATCATTTCCTTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTVRSYSLNMETDILTIFRRALD*HHFLLC Trigger: GCAGAGAAGGAAATGATGCAAATCGAGTGCTCGTCT...AAATATGGTAAGGATGTCGGTCTCCATATTAAGGCTGTACGATCGTACAGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
||
| CDS-3UTR CAA 90 bp | GCTCATGTCTTCTGGCTGCCGTCATCTTCCAGTGATCTGCACCTAAAACACAAATTCCTATCCTTTATTTaGCCTTTCTCTTCACTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AHVFWLPSSSSDLHLKHKFLSFI*PFSSLF Trigger: GAAGAGTGAAGAGAAAGGCAAAATAAAGGATAGGAA...TTTGTGTTTTAGGTGCAGATCACTGGAAGATGACGGCAGCCAGAAGACATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | GGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAGTTCATTTCATGTCTTTGACTTCCGCTCTTaGGACCTTGACCTTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGLLSHLSPSWLCSSFHVFDFRS*DLDLLS Trigger: AGACAGAAGGTCAAGGTCCAAAGAGCGGAAGTCAAA...GACATGAAATGAACTACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | ATGGGCACAACAGCACTGTTCTTATACCACAGCAATGAAACCCAAACTGTAACGACTTGTCTCGCAGTTTaGGAGACAAACTTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: MGTTALFLYHSNETQTVTTCLAV*ETNFFF Trigger: AAAGAAGAAGTTTGTCTCCAAAACTGCGAGACAAGT...CGTTACAGTTTGGGTTTCATTGCTGTGGTATAAGAACAGTGCTGTTGTGCCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | GGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAGTTCATTTCATGTCGAGACCTACTTCTTCTaGACTTGTCTCGCAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGLLSHLSPSWLCSSFHVETYFF*TCLAVL Trigger: CAAAACTGCGAGACAAGTCAAGAAGAAGTAGGTCTC...GACATGAAATGAACTACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | AAGTCTAACCATGAGGAGACGGGTGTAGGTTCAGAGGTGGTTTATTATCTCATCATAACTTCTTTCCGTTaGTGCTTCTTATGCTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: KSNHEETGVGSEVVYYLIITSFR*CFLCLC Trigger: GCATAAGCATAAGAAGCACAAACGGAAAGAAGTTAT...GATGAGATAATAAACCACCTCTGAACCTACACCCGTCTCCTCATGGTTAGACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | ATCCTCAGGGAGACAAACAGTGAGTTGACCCACTCCCAAACAGTAAAGATTACATATATTTCTGCACAATaGCTTGCCTCTGTATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILRETNSELTHSQTVKITYISAQ*LASVFF Trigger: GAAGAATACAGAGGCAAGCAATTGTGCAGAAATATA...TGTAATCTTTACTGTTTGGGAGTGGGTCAACTCACTGTTTGTCTCCCTGAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | TTCCGGATCATCTTATTTGGCATTTTTCCTTTAAGGTCCATGGCGAGCTTCAACTATATTTCTGCACAATaGCTTGCCTCTGTATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FRIILFGIFPLRSMASFNYISAQ*LASVFF Trigger: GAAGAATACAGAGGCAAGCAATTGTGCAGAAATATA...GTTGAAGCTCGCCATGGACCTTAAAGGAAAAATGCCAAATAAGATGATCCGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGTTTATTATCTCATCTATCACCTTCCTGGCTGTGTAGTTCATTTCATGTCTCTTACTTCGTTTCTTaGCACTATTTTTGTTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GGLLSHLSPSWLCSSFHVSYFVS*HYFCCP Trigger: CGGACAACAAAAATAGTGCAAAGAAACGAAGTAAGA...GACATGAAATGAACTACACAGCCAGGAAGGTGATAGATGAGATAATAAACCACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAATATCATCTCGAGGTCTaGTTCTCGGAGAAGAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PNATIRRYCHISLYNLIQYHLEV*FSEKKV Trigger: GACTTTCTTCTCCGAGAACAAGACCTCGAGATGATA...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS-3UTR CAA 90 bp | CCAAATGCTACCATAAGGAGATATTGTCACATCTCACTATACAATCTTATCCAACTTTCTAGCTTGGTCTaGAGACTTGCTTCTTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PNATIRRYCHISLYNLIQLSSLV*RLASFG Trigger: TCCAAAAGAAGCAAGTCTCAAGACCAAGCTAGAAAG...TTGGATAAGATTGTATAGTGAGATGTGACAATATCTCCTTATGGTAGCATTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077853.5 |
||
| CDS GCA 72 bp | CACCCCGTGATCGAGACCTTCTCCTCAAGCGTGACCTaGTCCTTCGGCTCCTATCTCTTCTCCGAGGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: HPVIETFSSSVT*SFGSYLFSEET Trigger: GGTCTCCTCGGAGAAGAGATAGGAGCCGAAGGAGCAGGTCACGCTTGAGGAGAAGGTCTCGATCACGGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077853.5 ENSMUST00000222509.2 |
||
| CDS GCA 72 bp | AGATGTCGTCTGGCGAAGGAGATCGTGATCTTGTGCTaGTCTGGGGGCTGCTTGGCTCAGATGGCACAGATA | + |
|
Preference number: 6 (lower is better) Translates to: RCRLAKEIVILC*SGGCLAQMAQI Trigger: TATCTGTGCCATCTGAGCCAAGCAGCCCCCAGAGCAGCACAAGATCACGATCTCCTTCGCCAGACGACATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000077853.5 ENSMUST00000220965.2 ENSMUST00000222509.2 |
||
| CDS CCA 72 bp | TCGTCTGGCGAAGGAGATCGTGATCTTGTGCTGCTCTaGGGGCTGCTTGGCTCAGATGGCACAGATATATTG | + |
|
Preference number: 6 (lower is better) Translates to: SSGEGDRDLVLL*GLLGSDGTDIL Trigger: CAATATATCTGTGCCATCTGAGCCAAGCAGCCCCCAGAGCAGCACAAGATCACGATCTCCTTCGCCAGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077853.5 ENSMUST00000220965.2 ENSMUST00000222509.2 |
||
| CDS CAA 72 bp | TTCCCAATGCCAGCAGCTCGGAGACGAGCACTCGATTaGCATCATTTCCTTCTCTGCCTCCCTGTCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: FPMPAARRRALD*HHFLLCLPVHG Trigger: TCCATGGACAGGGAGGCAGAGAAGGAAATGATGCAAATCGAGTGCTCGTCTCCGAGCTGCTGGCATTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
||
| CDS GCA 72 bp | ATGCCACCTGAGGAGGAGGATGAGCTCGCTAACTCGTaGAGCTGTGATCTCCGGAGCACGATAAAATCTACT | + |
|
Preference number: 6 (lower is better) Translates to: MPPEEEDELANS*SCDLRSTIKST Trigger: AGTAGATTTTATCGTGCTCCGGAGATCACAGCTGCACGAGTTAGCGAGCTCATCCTCCTCCTCAGGTGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220965.2 |
||
| CDS CCA 72 bp | CCTGCTTCTTCTTCTAGGAGACCTGCTGCGTCTCAATaGGGAACGGGACCTCCTTCTAATTGGAGACCTACT | + |
|
Preference number: 6 (lower is better) Translates to: PASSSRRPAASQ*GTGPPSNWRPT Trigger: AGTAGGTCTCCAATTAGAAGGAGGTCCCGTTCCCCATTGAGACGCAGCAGGTCTCCTAGAAGAAGAAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077853.5 ENSMUST00000222509.2 |
||
| CDS GCA 72 bp | CGGAGACGAGCACTCGATTTGCATCATTTCCTTCTCTaGCTCCCTGTCCATGGAGACATTTGTACCCTTACC | + |
|
Preference number: 6 (lower is better) Translates to: RRRALDLHHFLL*LPVHGDICTLT Trigger: GGTAAGGGTACAAATGTCTCCATGGACAGGGAGGCAGAGAAGGAAATGATGCAAATCGAGTGCTCGTCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
||
| CDS CAA 90 bp | TTGAAATCTTTCCCAATGCCAGCAGCTCGGAGACGAGCACTCGATTaGCATCATTTCCTTCTCTGCCTCCCTGTCCATGGAGACATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LKSFPMPAARRRALD*HHFLLCLPVHGDIC Trigger: ACAAATGTCTCCATGGACAGGGAGGCAGAGAAGGAAATGATGCAAATCGAGTGCTCGTCTCCGAGCTGCTGGCATTGGGAAAGATTTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
||
| CDS TCA 72 bp | TTTCTCTTGGGACCGCCGTCTGAGTGGAGGGGACTTTaGCTTTCTAGCTTGGTCTTGAGACTTGCTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: FLLGPPSEWRGL*LSSLVLRLASF Trigger: AAAAGAAGCAAGTCTCAAGACCAAGCTAGAAAGTCAAAGTCCCCTCCACTCAGACGGCGGTCCCAAGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077853.5 ENSMUST00000222509.2 |
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| CDS CAA 72 bp | TACTGGAAGACCTGGTACTGGACCTGTTCCCATTTCTaGCCTTTTCGTGAATCTCTCCTTCTTCTTCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: YWKTWYWTCSHF*PFRESLLLLRS Trigger: GCTCCGAAGAAGAAGGAGAGATTCACGAAAAGGCAAGAAATGGGAACAGGTCCAGTACCAGGTCTTCCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077853.5 ENSMUST00000222509.2 |
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| CDS CCA 72 bp | CGATTTGCATCATTTCCTTCTCTGCCTCCCTGTCCATaGAGACATTTGTACCCTTACCACACAGGCATGAAA | + |
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Preference number: 6 (lower is better) Translates to: RFASFPSLPPCP*RHLYPYHTGMK Trigger: TTTCATGCCTGTGTGGTAAGGGTACAAATGTCTCCATGGACAGGGAGGCAGAGAAGGAAATGATGCAAATCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
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| CDS CAA 72 bp | TCAAGCTTAGTTCTTTTTGCAGGGGACAGGCCTTCTTaGTCGGAAGCCTCGATAACTTCTTTCCGTTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SSLVLFAGDRPS*SEASITSFRLC Trigger: GCACAAACGGAAAGAAGTTATCGAGGCTTCCGACAAAGAAGGCCTGTCCCCTGCAAAAAGAACTAAGCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077853.5 ENSMUST00000222509.2 |
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| CDS CAA 90 bp | GCTAAATCATCAAGCTTAGTTCTTTTTGCAGGGGACAGGCCTTCTTaGTCGGAAGCCTCGATAACTTCTTTCCGTTTGTGCTTCTTATGC | + |
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Preference number: 6 (lower is better) Translates to: AKSSSLVLFAGDRPS*SEASITSFRLCFLC Trigger: GCATAAGAAGCACAAACGGAAAGAAGTTATCGAGGCTTCCGACAAAGAAGGCCTGTCCCCTGCAAAAAGAACTAAGCTTGATGATTTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077853.5 ENSMUST00000222509.2 |
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| CDS TCA 72 bp | GTCCATGGAGACATTTGTACCCTTACCACACAGGCATaGAATGTAGTAACATTCACTGGCTGTACTAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VHGDICTLTTQA*NVVTFTGCTRL Trigger: CAACCTAGTACAGCCAGTGAATGTTACTACATTTCATGCCTGTGTGGTAAGGGTACAAATGTCTCCATGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221077.2 |
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| CDS CAA 72 bp | CTTTTCCTTTTGTCCGATCTGTGCCTGGTCCGTTCTTaGGATCTGCTCTTACTTCGTTTCTTTGCACTATTT | + |
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Preference number: 6 (lower is better) Translates to: LFLLSDLCLVRS*DLLLLRFFALF Trigger: AAATAGTGCAAAGAAACGAAGTAAGAGCAGATCCAAAGAACGGACCAGGCACAGATCGGACAAAAGGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077853.5 ENSMUST00000222509.2 |
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| CDS CCA 72 bp | TTTTCCTTTTGTCCGATCTGTGCCTGGTCCGTTCTTTaGATCTGCTCTTACTTCGTTTCTTTGCACTATTTT | + |
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Preference number: 6 (lower is better) Translates to: FSFCPICAWSVL*ICSYFVSLHYF Trigger: AAAATAGTGCAAAGAAACGAAGTAAGAGCAGATCCAAAGAACGGACCAGGCACAGATCGGACAAAAGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077853.5 ENSMUST00000222509.2 |
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