Pregenerated sensors for PRPF40A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061136Ensembl transcript IDs: ENSMUST00000076313.14, ENSMUST00000125243.3, ENSMUST00000209364.3, ENSMUST00000209508.3, ENSMUST00000210789.3, ENSMUST00000211102.2, ENSMUST00000211712.3, ENSMUST00000239398.2
Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGGAAGTATTGGCATTAGCTGCTGCTGCAGCAGCTGCAGCAGCTaGAACAACAGCAGCCGCTGCTTCTGCAGCAGCCATGGTGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: GGSIGISCCCSSCSS*NNSSRCFCSSHGAH Trigger: ATGAGCACCATGGCTGCTGCAGAAGCAGCGGCTGCTGTTGTTGCAGCTGCTGCAGCTGCTGCAGCAGCAGCTAATGCCAATACTTCCACC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR GCA 90 bp | AGCTGCTGCTGCAGCAGCTGCAGCAGCTGCAACAACAGCAGCCGCTaGTTCTGCAGCAGCCATGGTGCTCATAGTGGTAGGAATTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: SCCCSSCSSCNNSSR*FCSSHGAHSGRNFC Trigger: ACAGAAATTCCTACCACTATGAGCACCATGGCTGCTGCAGAAGCAGCGGCTGCTGTTGTTGCAGCTGCTGCAGCTGCTGCAGCAGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR TCA 90 bp | GGTGCTCATAGTGGTAGGAATTTCTGTTGTAGGAACTGGGGCTGTTaGTGCTGTAGTACATTCTTCTTGCTTGCTGCTTTCTTCAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: GAHSGRNFCCRNWGC*CCSTFFLLAAFFSF Trigger: AAAGCTGAAGAAAGCAGCAAGCAAGAAGAATGTACTACAGCATCAACAGCCCCAGTTCCTACAACAGAAATTCCTACCACTATGAGCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR GCA 90 bp | TGTAACTCTTCATCCTCTGCGAACGTTGGATTATCCATCAGATACTaGTGGGCTTCAGACCAAGTGGTAGAGTATGTAACGTTAGCCATA | + |
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Preference number: 1 (lower is better) Translates to: CNSSSSANVGLSIRY*WASDQVVEYVTLAI Trigger: TATGGCTAACGTTACATACTCTACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAATCCAACGTTCGCAGAGGATGAAGAGTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
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| 3UTR CCA 90 bp | AACTCTTCATCCTCTGCGAACGTTGGATTATCCATCAGATACTGCTaGGCTTCAGACCAAGTGGTAGAGTATGTAACGTTAGCCATATTG | + |
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Preference number: 1 (lower is better) Translates to: NSSSSANVGLSIRYC*ASDQVVEYVTLAIL Trigger: CAATATGGCTAACGTTACATACTCTACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAATCCAACGTTCGCAGAGGATGAAGAGTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
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| 3UTR GCA 90 bp | CTACTGGATTTAAGAGTCAGAAATTTAGGACTGCCCCATCACCTGTaGCTTCATACTACGTCTAGCAACTACAATGTGTCTGATGGTATA | + |
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Preference number: 1 (lower is better) Translates to: LLDLRVRNLGLPHHL*LHTTSSNYNVSDGI Trigger: TATACCATCAGACACATTGTAGTTGCTAGACGTAGTATGAAGGCACAGGTGATGGGGCAGTCCTAAATTTCTGACTCTTAAATCCAGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| 3UTR TCA 90 bp | CGTGTCAAGTACTGGGACTCATTAGCAATCTTGACTATTGCTAAATaGGGACCCCTGAAAATTAAACTCAAGGAGATTCTGTTGCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: RVKYWDSLAILTIAK*GPLKIKLKEILLQV Trigger: AACTTGCAACAGAATCTCCTTGAGTTTAATTTTCAGGGGTCCTCATTTAGCAATAGTCAAGATTGCTAATGAGTCCCAGTACTTGACACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| 3UTR GCA 90 bp | AAGGAAATCAAATCACCTCATGACTTAGAACAAAGTAGAGACGTCTaGAGCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: KEIKSPHDLEQSRDV*SYHEIATFNPSCSA Trigger: GGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGCTGCAGACGTCTCTACTTTGTTCTAAGTCATGAGGTGATTTGATTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| 3UTR TCA 90 bp | ATTCAAAGATACATCTGCCTTTGTCAAACTGAAGATGTAGAAACATaGTCTACTGGATTTAAGAGTCAGAAATTTAGGACTGCCCCATCA | + |
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Preference number: 1 (lower is better) Translates to: IQRYICLCQTEDVET*STGFKSQKFRTAPS Trigger: TGATGGGGCAGTCCTAAATTTCTGACTCTTAAATCCAGTAGATCATGTTTCTACATCTTCAGTTTGACAAAGGCAGATGTATCTTTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| 3UTR-3UTR GCA 90 bp | GCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCTCATTCCAGGCATCTTaGCTGGCCCAATGGACACAG | + |
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Preference number: 2 (lower is better) Translates to: AVATMEVTSGSGATGTLPSFQAS*LAQWTQ Trigger: CTGTGTCCATTGGGCCAGGCAAGATGCCTGGAATGA...GGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTCCATTGTTGCTACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125243.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCGCTGCTTCTGCAGCAGCCATGGTGCTCATAGTGGTAGGAATTTCTGTTACCAGATGCTGCACCTaGTGCTACATCCATACTATT | + |
|
Preference number: 2 (lower is better) Translates to: AAAASAAAMVLIVVGISVTRCCT*CYIHTI Trigger: AATAGTATGGATGTAGCAGCAGGTGCAGCATCTGGT...AACAGAAATTCCTACCACTATGAGCACCATGGCTGCTGCAGAAGCAGCGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCATGGTGCTCATAGTGGTAGGAATTTCTGTTGTAGGAACTGGGGCTGTTTTTTGCACCAGATGCTaGACCTGCTGCTACATCCAT | + |
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Preference number: 2 (lower is better) Translates to: AAMVLIVVGISVVGTGAVFCTRC*TCCYIH Trigger: ATGGATGTAGCAGCAGGTGCAGCATCTGGTGCAAAA...AACAGCCCCAGTTCCTACAACAGAAATTCCTACCACTATGAGCACCATGGCTGC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| 3UTR-3UTR TCA 90 bp | GTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGTGAGGAACTGGGGCTGTTaGTGCTGTAGTACATTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VTSGSGATGTLPTVLVGVRNWGC*CCSTFF Trigger: GAAGAATGTACTACAGCATCAACAGCCCCAGTTCCT...CACACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR-3UTR GCA 90 bp | GCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCACCAGATGCTGCACCTaGTGCTACATCCATACTATT | + |
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Preference number: 2 (lower is better) Translates to: AVATMEVTSGSGATGTLPTRCCT*CYIHTI Trigger: AATAGTATGGATGTAGCAGCAGGTGCAGCATCTGGT...GGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTCCATTGTTGCTACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGTATCCTTCAAGATCTTCAAGTTCCTTAGGTTTGGCCCAGCGGGACTCCTTACCAGATGCTGCACCTaGTGCTACATCCATACTATT | + |
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Preference number: 2 (lower is better) Translates to: LVSFKIFKFLRFGPAGLLTRCCT*CYIHTI Trigger: AATAGTATGGATGTAGCAGCAGGTGCAGCATCTGGT...AAGGAGTCCCGCTGGGCCAAACCTAAGGAACTTGAAGATCTTGAAGGATACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| 3UTR-3UTR TCA 90 bp | GTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGTGTGCTTTCTTCAGCTTTaGTCATGGCATGCAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: VTSGSGATGTLPTVLVGVCFLQL*SWHAGL Trigger: CAAACCTGCATGCCATGATCAAAGCTGAAGAAAGCA...CACACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR-3UTR GCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAACAAAGTAGAGACGTCTaGAGCTATCATGAAATTGCC | + |
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Preference number: 2 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQQSRDV*SYHEIA Trigger: GGCAATTTCATGATAGCTGCAGACGTCTCTACTTTG...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATTTTCATTATCTACAGCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGTGCTGCTGCAGCAGCTaGAGCAGCTGCAACAACAGC | + |
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Preference number: 2 (lower is better) Translates to: CIFIIYSSSNNGSNLRFRCCCSS*SSCNNS Trigger: GCTGTTGTTGCAGCTGCTGCAGCTGCTGCAGCAGCA...CCTGAACCTGAGGTTACTTCCATTGTTGCTACTGCTGTAGATAATGAAAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTTTCTCACTCAGCTTTGCTAAAGCACTGTACCGAGGATCATTTATGATCATTGGCATTAGCTGCTaGTGCAGCAGCTGCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CFFSLSFAKALYRGSFMIIGISC*CSSCSS Trigger: GCTGCTGCAGCTGCTGCAGCAGCAGCTAATGCCAAT...GATCATAAATGATCCTCGGTACAGTGCTTTAGCAAAGCTGAGTGAGAAAAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000211712.3 |
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| 3UTR-3UTR GCA 90 bp | AGGAGTAAAATCGGAGACAGTTTCTTGTTTAGCTGGTTCCTCTCCAGTGTTACTAGTATTGGCATTAGCTaGTGCTGCAGCAGCTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: RSKIGDSFLFSWFLSSVTSIGIS*CCSSCS Trigger: GCTGCAGCTGCTGCAGCAGCAGCTAATGCCAATACT...AGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGTCTCCGATTTTACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR-3UTR GCA 90 bp | ATCGGAGACAGTTTCTTGTTTAGCTGGTTCCTCTCCAGTGTTACTGGATATATCAGTATTGGCATTAGCTaGTGCTGCAGCAGCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: IGDSFLFSWFLSSVTGYISIGIS*CCSSCS Trigger: GCTGCAGCTGCTGCAGCAGCAGCTAATGCCAATACT...GATATATCCAGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGTCTCCGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCCTGTAGTGCCCTGTaGAAGGGTCACAGAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSSCSAL*KGHRKT Trigger: TGTCTTTCTGTGACCCTTTCACAGGGCACTACAGGA...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTGAAAGGAGCCCCAAGACATGGAGTGCAACAGTGTTACCATGACTCATCCCAAAGTAGAGACGTCTaGAGCTATCATGAAATTGCC | + |
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Preference number: 2 (lower is better) Translates to: TLKGAPRHGVQQCYHDSSQSRDV*SYHEIA Trigger: GGCAATTTCATGATAGCTGCAGACGTCTCTACTTTG...GGATGAGTCATGGTAACACTGTTGCACTCCATGTCTTGGGGCTCCTTTCAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| 3UTR-3UTR GCA 90 bp | GACAATAGTTGCTCAGCAGGTGTTTTAAGATCATCTGGCTTTTCCCAGGTAGACTTTTGCACCAGATGCTaGACCTGCTGCTACATCCAT | + |
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Preference number: 2 (lower is better) Translates to: DNSCSAGVLRSSGFSQVDFCTRC*TCCYIH Trigger: ATGGATGTAGCAGCAGGTGCAGCATCTGGTGCAAAA...GTCTACCTGGGAAAAGCCAGATGATCTTAAAACACCTGCTGAGCAACTATTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| 3UTR-3UTR CCA 90 bp | AGATACTGCTGGGCTTCAGACCAAGTGGTAGAGTATGTAACGTTAGCCATATTGGTAAGGCAGGTTGCATaGAAGCCTGAGACATATGAG | + |
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Preference number: 2 (lower is better) Translates to: RYCWASDQVVEYVTLAILVRQVA*KPETYE Trigger: CTCATATGTCTCAGGCTTCCATGCAACCTGCCTTAC...CAATATGGCTAACGTTACATACTCTACCACTTGGTCTGAAGCCCAGCAGTATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGAGCAACTGGAACACTTCATGGCATGCAGGTTTaGTTTTGTAATAAGACCTCC | + |
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Preference number: 2 (lower is better) Translates to: TAVATMEVTSGSGATGTLHGMQV*FCNKTS Trigger: GGAGGTCTTATTACAAAATCAAACCTGCATGCCATG...AAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTCCATTGTTGCTACTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTTCTTGTTTAGCTGGTTCCTCTCCAGTGTTACTGGATATATCACCACTGAGGAACTGGGGCTGTTaGTGCTGTAGTACATTCTTC | + |
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Preference number: 2 (lower is better) Translates to: TVSCLAGSSPVLLDISPLRNWGC*CCSTFF Trigger: GAAGAATGTACTACAGCATCAACAGCCCCAGTTCCT...CAGTGGTGATATATCCAGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTTCTTGTTTAGCTGGTTCCTCTCCAGTGTTACTGGATATATCACCACTGGTAAGGCAGGTTGCATaGAAGCCTGAGACATATGAG | + |
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Preference number: 2 (lower is better) Translates to: TVSCLAGSSPVLLDISPLVRQVA*KPETYE Trigger: CTCATATGTCTCAGGCTTCCATGCAACCTGCCTTAC...CAGTGGTGATATATCCAGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| 3UTR-3UTR CCA 90 bp | GTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGTGTGTTTTAAGATCATCTaGCTTTTCCCAGGTAGACTG | + |
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Preference number: 2 (lower is better) Translates to: VTSGSGATGTLPTVLVGVCFKII*LFPGRL Trigger: CAGTCTACCTGGGAAAAGCCAGATGATCTTAAAACA...CACACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTTCTGCAGCAGCCATGGTGCTCATAGTGGTAGGAATTTCTGTTGTAGGAGCAACAATGGTATTCTaGTATCCTTCAAGATCTTCA | + |
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Preference number: 2 (lower is better) Translates to: AASAAAMVLIVVGISVVGATMVF*YPSRSS Trigger: TGAAGATCTTGAAGGATACCAGAATACCATTGTTGC...TCCTACAACAGAAATTCCTACCACTATGAGCACCATGGCTGCTGCAGAAGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR-3UTR TCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTATCCTGTAGTGCCCTGTaGAAGGGTCACAGAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: HQKHLFLKSSPQKITLALSCSAL*KGHRKT Trigger: TGTCTTTCTGTGACCCTTTCACAGGGCACTACAGGA...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTTCATTATCTACAGCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGAGCTTTTGCACCAGATGCTaGACCTGCTGCTACATCCAT | + |
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Preference number: 2 (lower is better) Translates to: IFIIYSSSNNGSNLRFRSFCTRC*TCCYIH Trigger: ATGGATGTAGCAGCAGGTGCAGCATCTGGTGCAAAA...GCTCCTGAACCTGAGGTTACTTCCATTGTTGCTACTGCTGTAGATAATGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| 3UTR-3UTR CCA 90 bp | ACATTGAAAGGAGCCCCAAGACATGGAGTGCAACAGTGTTACCATGACTCATCCAGACTTTCCTGTAAGTaGACTTTATGGATGAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: TLKGAPRHGVQQCYHDSSRLSCK*TLWMKH Trigger: ATGCTTCATCCATAAAGTCCACTTACAGGAAAGTCT...GGATGAGTCATGGTAACACTGTTGCACTCCATGTCTTGGGGCTCCTTTCAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| 3UTR CAA 90 bp | ATGGAGGACAGCTCAACAAAGTGTATGTTATCTTTCATTCTTACATaGAAAGGAGCCCCAAGACATGGAGTGCAACAGTGTTACCATGAC | + |
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Preference number: 2 (lower is better) Translates to: MEDSSTKCMLSFILT*KGAPRHGVQQCYHD Trigger: GTCATGGTAACACTGTTGCACTCCATGTCTTGGGGCTCCTTTCAATGTAAGAATGAAAGATAACATACACTTTGTTGAGCTGTCCTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| 3UTR CAA 90 bp | AATAAGTCCTTCCATCAGGTGATTTATGTTCTGTCCACATTGATTTaGCACCAGATGCTGCACCTGTTTGCTTGCTTTTCATCCCGCAAA | + |
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Preference number: 2 (lower is better) Translates to: NKSFHQVIYVLSTLI*HQMLHLFACFSSRK Trigger: TTTGCGGGATGAAAAGCAAGCAAACAGGTGCAGCATCTGGTGCAAAATCAATGTGGACAGAACATAAATCACCTGATGGAAGGACTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211102.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCCAAAGTAGAGACGTCTaGAGCTATCATGAAATTGCC | + |
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Preference number: 2 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSQSRDV*SYHEIA Trigger: GGCAATTTCATGATAGCTGCAGACGTCTCTACTTTG...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| 3UTR-3UTR GCA 90 bp | CTTACATTGAAAGGAGCCCCAAGACATGGAGTGCAACAGTGTTACCATGACTCAGGGTTTACAGGAAAATaGATAGACTTTTTAGTTGCG | + |
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Preference number: 2 (lower is better) Translates to: LTLKGAPRHGVQQCYHDSGFTGK*IDFLVA Trigger: CGCAACTAAAAAGTCTATGCATTTTCCTGTAAACCC...TGAGTCATGGTAACACTGTTGCACTCCATGTCTTGGGGCTCCTTTCAATGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| 3UTR-3UTR GCA 90 bp | AGGAGTAAAATCGGAGACAGTTTCTTGTTTAGCTGGTTCCTCTCCAGTGTTACTAGATGCTGCACCTGCTaGTACATCCATACTATTTAC | + |
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Preference number: 2 (lower is better) Translates to: RSKIGDSFLFSWFLSSVTRCCTC*YIHTIY Trigger: GTAAATAGTATGGATGTAGCAGCAGGTGCAGCATCT...AGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGTCTCCGATTTTACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| 3UTR-3UTR GCA 90 bp | CTTACATTGAAAGGAGCCCCAAGACATGGAGTGCAACAGTGTTACCATGACTCATTTTTCTCTTCTGGATaGAAAATGTCTACTGAACAC | + |
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Preference number: 2 (lower is better) Translates to: LTLKGAPRHGVQQCYHDSFFSSG*KMSTEH Trigger: GTGTTCAGTAGACATTTTGCATCCAGAAGAGAAAAA...TGAGTCATGGTAACACTGTTGCACTCCATGTCTTGGGGCTCCTTTCAATGTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTTTCTCACTCAGCTTTGCTAAAGCACTGTACCGAGGATCATTTATGATCAGATGCTGCACCTGCTaGTACATCCATACTATTTAC | + |
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Preference number: 2 (lower is better) Translates to: CFFSLSFAKALYRGSFMIRCCTC*YIHTIY Trigger: GTAAATAGTATGGATGTAGCAGCAGGTGCAGCATCT...GATCATAAATGATCCTCGGTACAGTGCTTTAGCAAAGCTGAGTGAGAAAAAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000211712.3 |
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| 3UTR-3UTR GCA 90 bp | ATCGGAGACAGTTTCTTGTTTAGCTGGTTCCTCTCCAGTGTTACTGGATATATCGTAGTACATTCTTCTTaGTTGCTGCTTTCTTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: IGDSFLFSWFLSSVTGYIVVHSS*LLLSSA Trigger: AGCTGAAGAAAGCAGCAAGCAAGAAGAATGTACTAC...GATATATCCAGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGTCTCCGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTCTTTTTCTCTCTCACGTTCACGGGCTTCTGCCTTTTCTAGTAAACTATGTAGTACATTCTTCTTaGTTGCTGCTTTCTTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PLLFLSHVHGLLPFLVNYVVHSS*LLLSSA Trigger: AGCTGAAGAAAGCAGCAAGCAAGAAGAATGTACTAC...ATAGTTTACTAGAAAAGGCAGAAGCCCGTGAACGTGAGAGAGAAAAAGAAGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
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| 3UTR CAA 90 bp | TGTAATAATAAGTCCTTCCATCAGGTGATTTATGTTCTGTCCACATaGATTTTGCACCAGATGCTGCACCTGCTGCTACATCCATACTAT | + |
|
Preference number: 2 (lower is better) Translates to: CNNKSFHQVIYVLST*ILHQMLHLLLHPYY Trigger: ATAGTATGGATGTAGCAGCAGGTGCAGCATCTGGTGCAAAATCAATGTGGACAGAACATAAATCACCTGATGGAAGGACTTATTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
||
| 3UTR CAA 90 bp | TGTAATAATAAGTCCTTCCATCAGGTGATTTATGTTCTGTCCACATaGATTTTGCACCAGATGCTGCACCTGTTTGCTTGCTTTTCATCC | + |
|
Preference number: 2 (lower is better) Translates to: CNNKSFHQVIYVLST*ILHQMLHLFACFSS Trigger: GGATGAAAAGCAAGCAAACAGGTGCAGCATCTGGTGCAAAATCAATGTGGACAGAACATAAATCACCTGATGGAAGGACTTATTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211102.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGGTATTAGCAAGCTGTGCTTGCTCTTCAGTTGATACAGTTACTGTATTTTCAAGTCCTTCCATCAGGTaGTTTATGTTCTGTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: VVLASCACSSVDTVTVFSSPSIR*FMFCPH Trigger: ATGTGGACAGAACATAAATCACCTGATGGAAGGACT...TGAAAATACAGTAACTGTATCAACTGAAGAGCAAGCACAGCTTGCTAATACCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCATGGCATGCAGGTTTGATTTTGTAATAAGACCTCCAGCAACAATGGTATTCAGTCCTTCCATCAGGTaGTTTATGTTCTGTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: IMACRFDFVIRPPATMVFSPSIR*FMFCPH Trigger: ATGTGGACAGAACATAAATCACCTGATGGAAGGACT...GAATACCATTGTTGCTGGAGGTCTTATTACAAAATCAAACCTGCATGCCATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR GCA 90 bp | GCCTCTTTTAAGCTCTCTTGTATGGATGATGGGATATATATGACTACATATGTCTTGCTGTGTCTGATTTaGATAGGTTCATTGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ASFKLSCMDDGIYMTTYVLLCLI*IGSLQG Trigger: TCCCTGCAATGAACCTATGCAAATCAGACACAGCAA...GACATATGTAGTCATATATATCCCATCATCCATACAAGAGAGCTTAAAAGAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR CAA 90 bp | AGAACAAAACATCTTCATAGATTTCTAGACGATCACGCTCTGAAATaGCATTCCAAACTTCCATCTCCCCAAACATTTGCTCAGCTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: RTKHLHRFLDDHALK*HSKLPSPQTFAQLF Trigger: AAAAAGCTGAGCAAATGTTTGGGGAGATGGAAGTTTGGAATGCAATTTCAGAGCGTGATCGTCTAGAAATCTATGAAGATGTTTTGTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTTTCTAAAGCCCGGATGTGTTCCTCAAAGCATATTAATGCATCTTCTTTATTAGCAAGCTGTGCTTaGTCTTCAGTTGATACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SFSKARMCSSKHINASSLLASCA*SSVDTV Trigger: AACTGTATCAACTGAAGAGCAAGCACAGCTTGCTAA...TAAAGAAGATGCATTAATATGCTTTGAGGAACACATCCGGGCTTTAGAAAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
||
| 3UTR-3UTR GCA 90 bp | CATATTAATGCATCTTCTTTATCCATGTTCTGTAACTCTTCATCCTCTGCGAACTTTCTCTTTCGTAGCTaGTTTGCTTGTTCCTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: HINASSLSMFCNSSSSANFLFRS*FACSFS Trigger: AGAAAAGGAACAAGCAAAGCAGCTACGAAAGAGAAA...GTTCGCAGAGGATGAAGAGTTACAGAACATGGATAAAGAAGATGCATTAATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
||
| 3UTR GCA 72 bp | TGCAGCAGCTGCAGCAGCTGCAACAACAGCAGCCGCTaGTTCTGCAGCAGCCATGGTGCTCATAGTGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: CSSCSSCNNSSR*FCSSHGAHSGR Trigger: CCTACCACTATGAGCACCATGGCTGCTGCAGAAGCAGCGGCTGCTGTTGTTGCAGCTGCTGCAGCTGCTGCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR CCA 72 bp | GGCAGAGGCAGGGGGATCTCTGAGTTTGGGGCCTGTTaGCCTACAGAGTTCCAAGACAGCTGCTGCTACACA | + |
|
Preference number: 3 (lower is better) Translates to: GRGRGISEFGAC*PTEFQDSCCYT Trigger: TGTGTAGCAGCAGCTGTCTTGGAACTCTGTAGGCCAACAGGCCCCAAACTCAGAGATCCCCCTGCCTCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR-3UTR CAA 90 bp | GTGCAGCTGCCCATGCTCGTGCAACTCGTCCAGAAAGATCTGAAAAGATTCCCTTGCTCCCATGAAGCATaGGAGGGCACCCGCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: VQLPMLVQLVQKDLKRFPCSHEA*EGTRFS Trigger: AGAAAAGCGGGTGCCCTCCAATGCTTCATGGGAGCA...AGGGAATCTTTTCAGATCTTTCTGGACGAGTTGCACGAGCATGGGCAGCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTATCCTTCAAGATCTTCAAGTTCCTTAGGTTTGGCCCAGCGGGACTCCTTGCTGCACCTGTTTGCTaGCTTTTCATCCCGCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: LVSFKIFKFLRFGPAGLLAAPVC*LFIPQI Trigger: TATTTGCGGGATGAAAAGCAAGCAAACAGGTGCAGC...AAGGAGTCCCGCTGGGCCAAACCTAAGGAACTTGAAGATCTTGAAGGATACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211102.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGTGGTGGAAGTATTGGCTTCCCGGAATCAGATTaGTACTCTTTCCATGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RSNWNTSHSISRCGGSIGFPESD*YSFHGH Trigger: ATGCCCATGGAAAGAGTACAAATCTGATTCCGGGAA...GCCAATACTTCCACCACACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCCCCAGCGGGACTCCTTaGTTTGAGAATTATAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: AVATMEVTSGSGATGTLPPSGTP*FENYSN Trigger: ATTACTATAATTCTCAAACAAAGGAGTCCCGCTGGG...GGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTCCATTGTTGCTACTGC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTTCTGCAGCAGCCATGGTGCTCATAGTGGTAGGAATTTCTGTTGTAGGACCCAGCGGGACTCCTTaGTTTGAGAATTATAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: AASAAAMVLIVVGISVVGPSGTP*FENYSN Trigger: ATTACTATAATTCTCAAACAAAGGAGTCCCGCTGGG...TCCTACAACAGAAATTCCTACCACTATGAGCACCATGGCTGCTGCAGAAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGTGGTGGAAGTATTGGCCTGCTTTCTTCAGCTTaGATCATGGCATGCAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RSNWNTSHSISRCGGSIGLLSSA*IMACRF Trigger: AAACCTGCATGCCATGATCAAAGCTGAAGAAAGCAG...GCCAATACTTCCACCACACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR TCA 72 bp | CACTGTCAAAGACTGGTTCCACCGATGACCTTGAACTaGATCCACTCATTCTCAAATGCAGCTGTTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HCQRLVPPMTLN*IHSFSNAAVEH Trigger: GTGCTCAACAGCTGCATTTGAGAATGAGTGGATTCAGTTCAAGGTCATCGGTGGAACCAGTCTTTGACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR GCA 72 bp | TCATCCTCTGCGAACGTTGGATTATCCATCAGATACTaGTGGGCTTCAGACCAAGTGGTAGAGTATGTAACG | + |
|
Preference number: 3 (lower is better) Translates to: SSSANVGLSIRY*WASDQVVEYVT Trigger: CGTTACATACTCTACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAATCCAACGTTCGCAGAGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
||
| 3UTR CCA 72 bp | CCATACTATTTACTCCAGGCGGTAAGGCAGGTTGCATaGAAGCCTGAGACATATGAGACATCATCATTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PYYLLQAVRQVA*KPETYETSSFL Trigger: CAGGAATGATGATGTCTCATATGTCTCAGGCTTCCATGCAACCTGCCTTACCGCCTGGAGTAAATAGTATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAGCAGCTATCATGAAATaGCCACTTTTAATCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQAAIMK*PLLIHP Trigger: AGGATGGATTAAAAGTGGCAATTTCATGATAGCTGC...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAGCAGCTATCATGAAATaGCCACTTTTAATCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKAAIMK*PLLIHP Trigger: AGGATGGATTAAAAGTGGCAATTTCATGATAGCTGC...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAATGTGATCTGCTCCATAGCCCAGATTGAAGAGCAGCGTTATGGACTAGCCCCACAGAAGATCACATaGGCTTTAACCAGTTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LNVICSIAQIEEQRYGLAPQKIT*ALTSSV Trigger: TACTGAACTGGTTAAAGCCAATGTGATCTTCTGTGG...GGCTAGTCCATAACGCTGCTCTTCAATCTGGGCTATGGAGCAGATCACATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTATGTTCTGTCCACATaGATTTTGCACCAGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSNLRFRSNWNTSHSISRYVLST*ILHQML Trigger: CAGCATCTGGTGCAAAATCAATGTGGACAGAACATA...CCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGTGGTGGAAGTATTGGCCCCAGCGGGACTCCTTaGTTTGAGAATTATAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: RSNWNTSHSISRCGGSIGPSGTP*FENYSN Trigger: ATTACTATAATTCTCAAACAAAGGAGTCCCGCTGGG...GCCAATACTTCCACCACACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR CCA 72 bp | TCCTCTGCGAACGTTGGATTATCCATCAGATACTGCTaGGCTTCAGACCAAGTGGTAGAGTATGTAACGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SSANVGLSIRYC*ASDQVVEYVTL Trigger: TAACGTTACATACTCTACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAATCCAACGTTCGCAGAGGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGAGCAACTGGAACACTTGTACATTCTTCTTGCTaGCTGCTTTCTTCAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TAVATMEVTSGSGATGTLVHSSC*LLSSAL Trigger: CAAAGCTGAAGAAAGCAGCAAGCAAGAAGAATGTAC...AAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTCCATTGTTGCTACTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR TCA 72 bp | AGTGGTAGGAATTTCTGTTGTAGGAACTGGGGCTGTTaGTGCTGTAGTACATTCTTCTTGCTTGCTGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SGRNFCCRNWGC*CCSTFFLLAAF Trigger: GAAAGCAGCAAGCAAGAAGAATGTACTACAGCATCAACAGCCCCAGTTCCTACAACAGAAATTCCTACCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTACCACAGAAGATCACATaGGCTTTAACCAGTTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: APLLLKVYQGSIKNTCFLPQKIT*ALTSSV Trigger: TACTGAACTGGTTAAAGCCAATGTGATCTTCTGTGG...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTTTCTTGTTTAGCTGGTTCCTCTCCAGTGTTACTGGATATATCACCACTGTTCCCGGAATCAGATTaGTACTCTTTCCATGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: TVSCLAGSSPVLLDISPLFPESD*YSFHGH Trigger: ATGCCCATGGAAAGAGTACAAATCTGATTCCGGGAA...CAGTGGTGATATATCCAGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGCGGGACTCCTTTGTTaGAGAATTATAGTAATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: EVTSGSGATGTLPTVLVGAGLLC*RIIVIR Trigger: CCTTATTACTATAATTCTCAAACAAAGGAGTCCCGC...ACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCACCACTGAGATCTTGAATAGCTGTGGTATTAGCAAGCTGTGCTTGCTCTTCCCCAGCGGGACTCCTTaGTTTGAGAATTATAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: ITTEILNSCGISKLCLLFPSGTP*FENYSN Trigger: ATTACTATAATTCTCAAACAAAGGAGTCCCGCTGGG...GAAGAGCAAGCACAGCTTGCTAATACCACAGCTATTCAAGATCTCAGTGGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGTAAAATCGGAGACAGTTTCTTGTTTAGCTGGTTCCTCTCCAGTGTTACTCTGCTTTCTTCAGCTTaGATCATGGCATGCAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RSKIGDSFLFSWFLSSVTLLSSA*IMACRF Trigger: AAACCTGCATGCCATGATCAAAGCTGAAGAAAGCAG...AGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGTCTCCGATTTTACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCAGATACTGCTGGGCTTCAGACCAAGTGGTAGAGTATGTAACGTTAGCCATAGTACATTCTTCTTGCTaGCTGCTTTCTTCAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: IRYCWASDQVVEYVTLAIVHSSC*LLSSAL Trigger: CAAAGCTGAAGAAAGCAGCAAGCAAGAAGAATGTAC...TATGGCTAACGTTACATACTCTACCACTTGGTCTGAAGCCCAGCAGTATCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
||
| 3UTR GCA 72 bp | TTAAGAGTCAGAAATTTAGGACTGCCCCATCACCTGTaGCTTCATACTACGTCTAGCAACTACAATGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRVRNLGLPHHL*LHTTSSNYNVS Trigger: AGACACATTGTAGTTGCTAGACGTAGTATGAAGGCACAGGTGATGGGGCAGTCCTAAATTTCTGACTCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTTTCTCACTCAGCTTTGCTAAAGCACTGTACCGAGGATCATTTATGATCTTCCCGGAATCAGATTaGTACTCTTTCCATGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: CFFSLSFAKALYRGSFMIFPESD*YSFHGH Trigger: ATGCCCATGGAAAGAGTACAAATCTGATTCCGGGAA...GATCATAAATGATCCTCGGTACAGTGCTTTAGCAAAGCTGAGTGAGAAAAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTTTCTCACTCAGCTTTGCTAAAGCACTGTACCGAGGATCATTTATGATCCTGCTTTCTTCAGCTTaGATCATGGCATGCAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CFFSLSFAKALYRGSFMILLSSA*IMACRF Trigger: AAACCTGCATGCCATGATCAAAGCTGAAGAAAGCAG...GATCATAAATGATCCTCGGTACAGTGCTTTAGCAAAGCTGAGTGAGAAAAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000211712.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTATTAGCAAGCTGTGCTTGCTCTTCAGTTGATACAGTTACTGTATTTTCAGTACATTCTTCTTGCTaGCTGCTTTCTTCAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VVLASCACSSVDTVTVFSVHSSC*LLSSAL Trigger: CAAAGCTGAAGAAAGCAGCAAGCAAGAAGAATGTAC...TGAAAATACAGTAACTGTATCAACTGAAGAGCAAGCACAGCTTGCTAATACCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR TCA 72 bp | ATCAAAAACCTGGGCAGGATGGAAAAAGGGCTGTACTaGTCTGTCCTAACTCATTTAAAGGGCAATGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: IKNLGRMEKGLY*SVLTHLKGNEI Trigger: TATTTCATTGCCCTTTAAATGAGTTAGGACAGATCAGTACAGCCCTTTTTCCATCCTGCCCAGGTTTTTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR TCA 72 bp | GCTCAACAAAGTGTATGTTATCTTTCATTCTTACATTaGAAGGAGCCCCAAGACATGGAGTGCAACAGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: AQQSVCYLSFLH*KEPQDMECNSV Trigger: AACACTGTTGCACTCCATGTCTTGGGGCTCCTTTCAATGTAAGAATGAAAGATAACATACACTTTGTTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR CCA 72 bp | TTTAGGAGTAAAATCGGAGACAGTTTCTTGTTTAGCTaGTTCCTCTCCAGTGTTACTGGATATATCACCACT | + |
|
Preference number: 3 (lower is better) Translates to: FRSKIGDSFLFS*FLSSVTGYITT Trigger: AGTGGTGATATATCCAGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGTCTCCGATTTTACTCCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| 3UTR TCA 72 bp | TACTGGGACTCATTAGCAATCTTGACTATTGCTAAATaGGGACCCCTGAAAATTAAACTCAAGGAGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: YWDSLAILTIAK*GPLKIKLKEIL Trigger: CAGAATCTCCTTGAGTTTAATTTTCAGGGGTCCTCATTTAGCAATAGTCAAGATTGCTAATGAGTCCCAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR CCA 72 bp | GTTACAGTAACTAGACTTTCCTGTAAGTGGACTTTATaGATGAAGCATCAGTTCTCAGTGGGATGCTTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: VTVTRLSCKWTL*MKHQFSVGCFN Trigger: ATTAAAGCATCCCACTGAGAACTGATGCTTCATCCATAAAGTCCACTTACAGGAAAGTCTAGTTACTGTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR TCA 72 bp | TACATCTGCCTTTGTCAAACTGAAGATGTAGAAACATaGTCTACTGGATTTAAGAGTCAGAAATTTAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: YICLCQTEDVET*STGFKSQKFRT Trigger: AGTCCTAAATTTCTGACTCTTAAATCCAGTAGATCATGTTTCTACATCTTCAGTTTGACAAAGGCAGATGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR GCA 72 bp | ACTATAGCCTCAAACTACACAGGGTTTACAGGAAAATaGATAGACTTTTTAGTTGCGATTACTGATCTATAT | + |
|
Preference number: 3 (lower is better) Translates to: TIASNYTGFTGK*IDFLVAITDLY Trigger: ATATAGATCAGTAATCGCAACTAAAAAGTCTATGCATTTTCCTGTAAACCCTGTGTAGTTTGAGGCTATAGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTCTGCAGCAGCCATGGTGCTCATAGTGGTAGGAATTTCTGTTGTAGGATCGTCGGGCTCAGACTaGTCCGTCGGCGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AASAAAMVLIVVGISVVGSSGSD*SVGGHC Trigger: GCAGTGGCCGCCGACGGAGCAGTCTGAGCCCGACGA...TCCTACAACAGAAATTCCTACCACTATGAGCACCATGGCTGCTGCAGAAGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209508.3 ENSMUST00000211712.3 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACTCGTCGGGCTCAGACTaGTCCGTCGGCGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNSSGSD*SVGGHC Trigger: GCAGTGGCCGCCGACGGAGCAGTCTGAGCCCGACGA...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR TCA 90 bp | GCAGCCGCTGCTTCTGCAGCAGCCATGGTGCTCATAGTGGTAGGAATTTCTGTTGGCATGTTTGCTCTCTaGCCCATAGGGTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AAAASAAAMVLIVVGISVGMFAL*PIGCMP Trigger: GGGCATGCACCCTATGGGTCAGAGAGCAAACATGCC...AACAGAAATTCCTACCACTATGAGCACCATGGCTGCTGCAGAAGCAGCGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAACCATTTCACTCACCATaGGGCCTCCACGCTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQPFHSP*GLHARL Trigger: GAGCCGAGCGTGGAGGCCTCATGGTGAGTGAAATGG...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAACATAGCCTGCTCCCATaGAGCATTGGAGGGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKHSLLP*SIGGHP Trigger: CGGGTGCCCTCCAATGCTTCATGGGAGCAGGCTATG...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCTCGTCGGGCTCAGACTaGTCCGTCGGCGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIMKLPLLIHPVVPCERVSSGSD*SVGGHC Trigger: GCAGTGGCCGCCGACGGAGCAGTCTGAGCCCGACGA...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR CCA 90 bp | CTGGTATCCTTCAAGATCTTCAAGTTCCTTAGGTTTGGCCCAGCGGGACTCCTTCCCCGCGAGGGAGGTTaGCTCTCCATTTCACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LVSFKIFKFLRFGPAGLLPREGG*LSISLT Trigger: GGTGAGTGAAATGGAGAGCCAACCTCCCTCGCGGGG...AAGGAGTCCCGCTGGGCCAAACCTAAGGAACTTGAAGATCTTGAAGGATACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACCATAGCCTGCTCCCATaGAGCATTGGAGGGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNHSLLP*SIGGHP Trigger: CGGGTGCCCTCCAATGCTTCATGGGAGCAGGCTATG...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTTTCTTGTTTAGCTGGTTCCTCTCCAGTGTTACTGGATATATCACCACTGTCGTCGGGCTCAGACTaGTCCGTCGGCGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TVSCLAGSSPVLLDISPLSSGSD*SVGGHC Trigger: GCAGTGGCCGCCGACGGAGCAGTCTGAGCCCGACGA...CAGTGGTGATATATCCAGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209508.3 ENSMUST00000211712.3 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAGCAGCCGCTGCTTCTaGAGCAGCCATGGTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQSSRCF*SSHGAH Trigger: ATGAGCACCATGGCTGCTGCAGAAGCAGCGGCTGCT...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACAGCAGCTGCAGCAGCTaGAACAACAGCAGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNSSCSS*NNSSRC Trigger: GCAGCGGCTGCTGTTGTTGCAGCTGCTGCAGCTGCT...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAGAGTGCAGCTGCCCATaGTCGTGCAACTCGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQECSCP*SCNSSR Trigger: TCTGGACGAGTTGCACGAGCATGGGCAGCTGCACTC...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | ACATTGAAAGGAGCCCCAAGACATGGAGTGCAACAGTGTTACCATGACTCATCCCCCCGCGAGGGAGGTTaGCTCTCCATTTCACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TLKGAPRHGVQQCYHDSSPREGG*LSISLT Trigger: GGTGAGTGAAATGGAGAGCCAACCTCCCTCGCGGGG...GGATGAGTCATGGTAACACTGTTGCACTCCATGTCTTGGGGCTCCTTTCAATGT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR CCA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGCCCCGCGAGGGAGGTTaGCTCTCCATTTCACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLPREGG*LSISLT Trigger: GGTGAGTGAAATGGAGAGCCAACCTCCCTCGCGGGG...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAGGCATTTGTCCCATTaGAGGCCCTCCCATAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKRHLSH*RPSHRG Trigger: CCCCCTATGGGAGGGCCTCCAATGGGACAAATGCCT...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | TTGAATGTGATCTGCTCCATAGCCCAGATTGAAGAGCAGCGTTATGGACTAGCCGGCATGTTTGCTCTCTaGCCCATAGGGTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LNVICSIAQIEEQRYGLAGMFAL*PIGCMP Trigger: GGGCATGCACCCTATGGGTCAGAGAGCAAACATGCC...GGCTAGTCCATAACGCTGCTCTTCAATCTGGGCTATGGAGCAGATCACATTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR TCA 90 bp | AGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGTGGTGGAAGTATTGGCGGCATGTTTGCTCTCTaGCCCATAGGGTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSNWNTSHSISRCGGSIGGMFAL*PIGCMP Trigger: GGGCATGCACCCTATGGGTCAGAGAGCAAACATGCC...GCCAATACTTCCACCACACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACAGCAGCCGCTGCTTCTaGAGCAGCCATGGTGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNSSRCF*SSHGAH Trigger: ATGAGCACCATGGCTGCTGCAGAAGCAGCGGCTGCT...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTCCCCGCGAGGGAGGTTaGCTCTCCATTTCACTCACC | + |
|
Preference number: 4 (lower is better) Translates to: EVTSGSGATGTLPTVLVGPREGG*LSISLT Trigger: GGTGAGTGAAATGGAGAGCCAACCTCCCTCGCGGGG...ACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 |
||
| CDS-3UTR CCA 90 bp | TGCAGCAGCCATGGTGCTCATAGTGGTAGGAATTTCTGTTGTAGGAACTGGGGCAGGGTGCATGCCCATTaGTGCATAATGCATGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSSHGAHSGRNFCCRNWGRVHAH*CIMHAR Trigger: CCTGGCATGCATTATGCACCAATGGGCATGCACCCT...GCCCCAGTTCCTACAACAGAAATTCCTACCACTATGAGCACCATGGCTGCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| CDS-3UTR CCA 90 bp | GTCCACATTGATTTTGCACCAGATGCTGCACCTGTTTGCTTGCTTTTCATCCCGAGGCATTTGTCCCATTaGAGGCCCTCCCATAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHIDFAPDAAPVCLLFIPRHLSH*RPSHRG Trigger: CCCCCTATGGGAGGGCCTCCAATGGGACAAATGCCT...CGGGATGAAAAGCAAGCAAACAGGTGCAGCATCTGGTGCAAAATCAATGTGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211102.2 |
||
| CDS-3UTR TCA 90 bp | TTCAAGATCTTCAAGTTCCTTAGGTTTGGCCCAGCGGGACTCCTTTGTTTGAGAGGCATGTTTGCTCTCTaGCCCATAGGGTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FKIFKFLRFGPAGLLCLRGMFAL*PIGCMP Trigger: GGGCATGCACCCTATGGGTCAGAGAGCAAACATGCC...TCTCAAACAAAGGAGTCCCGCTGGGCCAAACCTAAGGAACTTGAAGATCTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| CDS-3UTR TCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTACATAGCCTGCTCCCATaGAGCATTGGAGGGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLHSLLP*SIGGHP Trigger: CGGGTGCCCTCCAATGCTTCATGGGAGCAGGCTATG...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAACGCTCTGAAGCAGAATaGGACTCTGATCGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKRSEAE*DSDRCL Trigger: AAGGCAGCGATCAGAGTCTCATTCTGCTTCAGAGCG...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCAGCAGCTGCAGCAGCTaGAACAACAGCAGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIMKLPLLIHPVVPCERVSSCSS*NNSSRC Trigger: GCAGCGGCTGCTGTTGTTGCAGCTGCTGCAGCTGCT...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAGTATTGGCATTAGCTaGTGCTGCAGCAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQSIGIS*CCSSCS Trigger: GCTGCAGCTGCTGCAGCAGCAGCTAATGCCAATACT...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCAGGGTGCATGCCCATTaGTGCATAATGCATGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVATMEVTSGSGATGTLPRVHAH*CIMHAR Trigger: CCTGGCATGCATTATGCACCAATGGGCATGCACCCT...GGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTCCATTGTTGCTACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAGCTCCCATGAAGCATTaGAGGGCACCCGCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQAPMKH*RAPAFL Trigger: AAGAAAAGCGGGTGCCCTCCAATGCTTCATGGGAGC...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGCAGCCATGGTGCTCATAGTGGTAGGAATTTCTGTTGTAGGAACTGGGGCTGTGGCATCATTCCATaGGGTACAGGAGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSSHGAHSGRNFCCRNWGCGIIP*GTGGMF Trigger: AAACATGCCTCCTGTACCTCATGGAATGATGCCACA...GCCCCAGTTCCTACAACAGAAATTCCTACCACTATGAGCACCATGGCTGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| CDS-3UTR GCA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAGTGCATGCCCATTGGTaGATAATGCATGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKVHAHW*IMHARM Trigger: CATCCTGGCATGCATTATGCACCAATGGGCATGCAC...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAGTGCATGCCCATTGGTaGATAATGCATGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQVHAHW*IMHARM Trigger: CATCCTGGCATGCATTATGCACCAATGGGCATGCAC...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAATACAGGAGGCATGTTTaGTCTCTGACCCATAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQYRRHV*SLTHRV Trigger: CACCCTATGGGTCAGAGAGCAAACATGCCTCCTGTA...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCAGCAGCTGCAGCAGCTaGAACAACAGCAGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSSSCSS*NNSSRC Trigger: GCAGCGGCTGCTGTTGTTGCAGCTGCTGCAGCTGCT...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACAGTATTGGCATTAGCTaGTGCTGCAGCAGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNSIGIS*CCSSCS Trigger: GCTGCAGCTGCTGCAGCAGCAGCTAATGCCAATACT...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACAGGGTGCATGCCCATTaGTGCATAATGCATGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNRVHAH*CIMHAR Trigger: CCTGGCATGCATTATGCACCAATGGGCATGCACCCT...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTCTGCAGCAGCCATGGTGCTCATAGTGGTAGGAATTTCTGTTGTAGGAAGGGGGCATCATCTGTaGCATCATTCCATGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AASAAAMVLIVVGISVVGRGHHL*HHSMRY Trigger: GTACCTCATGGAATGATGCCACAGATGATGCCCCCT...TCCTACAACAGAAATTCCTACCACTATGAGCACCATGGCTGCTGCAGAAGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| CDS-3UTR TCA 90 bp | ATCTCAACAGAAAATGGACATGGCGATGAGAAGGTTAGAAATAAAGTACCTCCCCCATTTCACTCACCATaGGGCCTCCACGCTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISTENGHGDEKVRNKVPPPFHSP*GLHARL Trigger: GAGCCGAGCGTGGAGGCCTCATGGTGAGTGAAATGG...GGGAGGTACTTTATTTCTAACCTTCTCATCGCCATGTCCATTTTCTGTTGAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR TCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATACTGGAGCACAGGTTTaGGCCGGACAATCTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHTGAQV*AGQSPL Trigger: GAGCGGAGATTGTCCGGCTCAAACCTGTGCTCCAGT...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCGGCATGTTTGCTCTCTaGCCCATAGGGTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSGMFAL*PIGCMP Trigger: GGGCATGCACCCTATGGGTCAGAGAGCAAACATGCC...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGCTACATCCATACTATTTACTCCAGGCGGTAAGGCAGGTTGCATGGAAGTGTGGCATCATTCCATaGGGTACAGGAGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLHPYYLLQAVRQVAWKCGIIP*GTGGMF Trigger: AAACATGCCTCCTGTACCTCATGGAATGATGCCACA...CTTCCATGCAACCTGCCTTACCGCCTGGAGTAAATAGTATGGATGTAGCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAGGAACTGGGGCTGTTaGTGCTGTAGTACATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQRNWGC*CCSTFF Trigger: GAAGAATGTACTACAGCATCAACAGCCCCAGTTCCT...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | GTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGTGGTGCATGCCCATTGGTaGATAATGCATGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VTSGSGATGTLPTVLVGVVHAHW*IMHARM Trigger: CATCCTGGCATGCATTATGCACCAATGGGCATGCAC...CACACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| CDS-3UTR GCA 90 bp | GTCCACATTGATTTTGCACCAGATGCTGCACCTGTTTGCTTGCTTTTCATCCCGGTGCATGCCCATTGGTaGATAATGCATGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VHIDFAPDAAPVCLLFIPVHAHW*IMHARM Trigger: CATCCTGGCATGCATTATGCACCAATGGGCATGCAC...CGGGATGAAAAGCAAGCAAACAGGTGCAGCATCTGGTGCAAAATCAATGTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211102.2 |
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| CDS-3UTR GCA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGGTGCATGCCCATTGGTaGATAATGCATGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLVHAHW*IMHARM Trigger: CATCCTGGCATGCATTATGCACCAATGGGCATGCAC...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTGCTGCTGCAGCAGCTaGAGCAGCTGCAACAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSCCCSS*SSCNNS Trigger: GCTGTTGTTGCAGCTGCTGCAGCTGCTGCAGCAGCA...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCATTGGCATTAGCTGCTaGTGCAGCAGCTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AIMKLPLLIHPVVPCERVIGISC*CSSCSS Trigger: GCTGCTGCAGCTGCTGCAGCAGCAGCTAATGCCAAT...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCGAGTGCAGCTGCCCATaGTCGTGCAACTCGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSECSCP*SCNSSR Trigger: TCTGGACGAGTTGCACGAGCATGGGCAGCTGCACTC...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTACAGAGACCCAAGAACTaGAGCACAGGTTTGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLQRPKN*STGLSR Trigger: CCGGCTCAAACCTGTGCTCCAGTTCTTGGGTCTCTG...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGAGGGGGCATCATCTGTaGCATCATTCCATGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLRGHHL*HHSMRY Trigger: GTACCTCATGGAATGATGCCACAGATGATGCCCCCT...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CCA 90 bp | AACCTCAGGTTCAGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGTGGTAGGGGGCATCATCTGTaGCATCATTCCATGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NLRFRSNWNTSHSISRCGRGHHL*HHSMRY Trigger: GTACCTCATGGAATGATGCCACAGATGATGCCCCCT...ACCACACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| CDS-3UTR CCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACAGGGGGCATCATCTGTaGCATCATTCCATGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNRGHHL*HHSMRY Trigger: GTACCTCATGGAATGATGCCACAGATGATGCCCCCT...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATAGGCATTTGTCCCATTaGAGGCCCTCCCATAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHRHLSH*RPSHRG Trigger: CCCCCTATGGGAGGGCCTCCAATGGGACAAATGCCT...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | TGTATTTTCATTATCTACAGCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGCCATTTCACTCACCATaGGGCCTCCACGCTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CIFIIYSSSNNGSNLRFRPFHSP*GLHARL Trigger: GAGCCGAGCGTGGAGGCCTCATGGTGAGTGAAATGG...CCTGAACCTGAGGTTACTTCCATTGTTGCTACTGCTGTAGATAATGAAAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 |
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| CDS-3UTR TCA 90 bp | TTCCCGGAATCAGATTTGTACTCTTTCCATGGGCATTTAGACAATAGTTGCTCAGGCATGTTTGCTCTCTaGCCCATAGGGTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPESDLYSFHGHLDNSCSGMFAL*PIGCMP Trigger: GGGCATGCACCCTATGGGTCAGAGAGCAAACATGCC...TGAGCAACTATTGTCTAAATGCCCATGGAAAGAGTACAAATCTGATTCCGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACTGTGGCATCATTCCATaGGGTACAGGAGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNCGIIP*GTGGMF Trigger: AAACATGCCTCCTGTACCTCATGGAATGATGCCACA...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR TCA 90 bp | GTCCACATTGATTTTGCACCAGATGCTGCACCTGTTTGCTTGCTTTTCATCCCGTGTGGCATCATTCCATaGGGTACAGGAGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHIDFAPDAAPVCLLFIPCGIIP*GTGGMF Trigger: AAACATGCCTCCTGTACCTCATGGAATGATGCCACA...CGGGATGAAAAGCAAGCAAACAGGTGCAGCATCTGGTGCAAAATCAATGTGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211102.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAATGCTTTCTTCAGCTTTaGTCATGGCATGCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQCFLQL*SWHAGL Trigger: CAAACCTGCATGCCATGATCAAAGCTGAAGAAAGCA...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACAGGAACTGGGGCTGTTaGTGCTGTAGTACATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNRNWGC*CCSTFF Trigger: GAAGAATGTACTACAGCATCAACAGCCCCAGTTCCT...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTAACCTCAGGTTCAGGAGCAACTGGAACACTTCCCACAGTATTAGTAGGTGTGCATGCCCATTGGTaGATAATGCATGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EVTSGSGATGTLPTVLVGVHAHW*IMHARM Trigger: CATCCTGGCATGCATTATGCACCAATGGGCATGCAC...ACCTACTAATACTGTGGGAAGTGTTCCAGTTGCTCCTGAACCTGAGGTTACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| CDS-3UTR GCA 90 bp | TTCAAGATCTTCAAGTTCCTTAGGTTTGGCCCAGCGGGACTCCTTTGTTTGAGATACAGGAGGCATGTTTaGTCTCTGACCCATAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKIFKFLRFGPAGLLCLRYRRHV*SLTHRV Trigger: CACCCTATGGGTCAGAGAGCAAACATGCCTCCTGTA...TCTCAAACAAAGGAGTCCCGCTGGGCCAAACCTAAGGAACTTGAAGATCTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
||
| CDS-3UTR GCA 90 bp | GGTGATTTATGTTCTGTCCACATTGATTTTGCACCAGATGCTGCACCTGCTGCTTACAGGAGGCATGTTTaGTCTCTGACCCATAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GDLCSVHIDFAPDAAPAAYRRHV*SLTHRV Trigger: CACCCTATGGGTCAGAGAGCAAACATGCCTCCTGTA...AGCAGCAGGTGCAGCATCTGGTGCAAAATCAATGTGGACAGAACATAAATCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| CDS-3UTR GCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATATTGGCATTAGCTGCTaGTGCAGCAGCTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHIGISC*CSSCSS Trigger: GCTGCTGCAGCTGCTGCAGCAGCAGCTAATGCCAAT...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCGACATAGAGTGCAGCTaGCCATGCTCGTGCAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSDIECS*PCSCNS Trigger: CGAGTTGCACGAGCATGGGCAGCTGCACTCTATGTC...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGGGTGCATGCCCATTaGTGCATAATGCATGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLRVHAH*CIMHAR Trigger: CCTGGCATGCATTATGCACCAATGGGCATGCACCCT...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACGTAAGGCAGGTTGCATaGAAGCCTGAGACATATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNVRQVA*KPETYE Trigger: CTCATATGTCTCAGGCTTCCATGCAACCTGCCTTAC...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACTCCATCAGATACTGCTaGGCTTCAGACCAAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNSIRYC*ASDQVV Trigger: TACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGA...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR TCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATCGCTCTGAAGCAGAATaGGACTCTGATCGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHRSEAE*DSDRCL Trigger: AAGGCAGCGATCAGAGTCTCATTCTGCTTCAGAGCG...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTTGGTGCATAATGCATaGCAGGATGCCCCATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHLVHNA*QDAPSR Trigger: CCTCGATGGGGCATCCTGGCATGCATTATGCACCAA...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTATACAGGAGGCATGTTTaGTCTCTGACCCATAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLYRRHV*SLTHRV Trigger: CACCCTATGGGTCAGAGAGCAAACATGCCTCCTGTA...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAGATGCTGCACCTGCTaGTACATCCATACTATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQRCCTC*YIHTIY Trigger: GTAAATAGTATGGATGTAGCAGCAGGTGCAGCATCT...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAGATGCTGCACCTGCTaGTACATCCATACTATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKRCCTC*YIHTIY Trigger: GTAAATAGTATGGATGTAGCAGCAGGTGCAGCATCT...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGACCAGATGCTGCACCTaGTGCTACATCCATACTATT | + |
|
Preference number: 4 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLTRCCT*CYIHTI Trigger: AATAGTATGGATGTAGCAGCAGGTGCAGCATCTGGT...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTATGCTGCTGCAGCAGCTaGAGCAGCTGCAACAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALCCCSS*SSCNNS Trigger: GCTGTTGTTGCAGCTGCTGCAGCTGCTGCAGCAGCA...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | ATCTCAACAGAAAATGGACATGGCGATGAGAAGGTTAGAAATAAAGTACCTCCCATTGGCATTAGCTGCTaGTGCAGCAGCTGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTENGHGDEKVRNKVPPIGISC*CSSCSS Trigger: GCTGCTGCAGCTGCTGCAGCAGCAGCTAATGCCAAT...GGGAGGTACTTTATTTCTAACCTTCTCATCGCCATGTCCATTTTCTGTTGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| CDS-3UTR GCA 90 bp | ATTTATGTTCTGTCCACATTGATTTTGCACCAGATGCTGCACCTGCTGCTACATTCATTCCAGGCATCTTaGCTGGCCCAATGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: IYVLSTLILHQMLHLLLHSFQAS*LAQWTQ Trigger: CTGTGTCCATTGGGCCAGGCAAGATGCCTGGAATGA...ATGTAGCAGCAGGTGCAGCATCTGGTGCAAAATCAATGTGGACAGAACATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209508.3 ENSMUST00000211712.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATAGGGTGCATGCCCATTaGTGCATAATGCATGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHRVHAH*CIMHAR Trigger: CCTGGCATGCATTATGCACCAATGGGCATGCACCCT...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | GTCCACATTGATTTTGCACCAGATGCTGCACCTGCTGCTACATCCATACTATTTAGGGGGCATCATCTGTaGCATCATTCCATGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VHIDFAPDAAPAATSILFRGHHL*HHSMRY Trigger: GTACCTCATGGAATGATGCCACAGATGATGCCCCCT...AAATAGTATGGATGTAGCAGCAGGTGCAGCATCTGGTGCAAAATCAATGTGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAGACCTCCAGCAACAATaGTATTCTGGTATCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKDLQQQ*YSGILQ Trigger: TTGAAGGATACCAGAATACCATTGTTGCTGGAGGTC...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAGACCTCCAGCAACAATaGTATTCTGGTATCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQDLQQQ*YSGILQ Trigger: TTGAAGGATACCAGAATACCATTGTTGCTGGAGGTC...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCGCTCCCATGAAGCATTaGAGGGCACCCGCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSAPMKH*RAPAFL Trigger: AAGAAAAGCGGGTGCCCTCCAATGCTTCATGGGAGC...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAATCCTCTGCGAACGTTaGATTATCCATCAGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKILCER*IIHQIL Trigger: CAGTATCTGATGGATAATCCAACGTTCGCAGAGGAT...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | ATCGGAGACAGTTTCTTGTTTAGCTGGTTCCTCTCCAGTGTTACTGGATATATCAAGAAATTGTCCCATTaGAGGCCCTCCCATAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IGDSFLFSWFLSSVTGYIKKLSH*RPSHRG Trigger: CCCCCTATGGGAGGGCCTCCAATGGGACAATTTCTT...GATATATCCAGTAACACTGGAGAGGAACCAGCTAAACAAGAAACTGTCTCCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125243.3 |
||
| CDS-3UTR TCA 90 bp | CAGTATTGTAATAATAAGTCCTTCCATCAGGTGATTTATGTTCTGTCCACATTGCCATTTCACTCACCATaGGGCCTCCACGCTCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QYCNNKSFHQVIYVLSTLPFHSP*GLHARL Trigger: GAGCCGAGCGTGGAGGCCTCATGGTGAGTGAAATGG...CAATGTGGACAGAACATAAATCACCTGATGGAAGGACTTATTATTACAATACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 |
||
| CDS-3UTR TCA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTGGCATGTTTGCTCTCTaGCCCATAGGGTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSGMFAL*PIGCMP Trigger: GGGCATGCACCCTATGGGTCAGAGAGCAAACATGCC...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
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| CDS-3UTR TCA 90 bp | TTGAATGTGATCTGCTCCATAGCCCAGATTGAAGAGCAGCGTTATGGACTAGCCCATGGCATGCAGGTTTaGTTTTGTAATAAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNVICSIAQIEEQRYGLAHGMQV*FCNKTS Trigger: GGAGGTCTTATTACAAAATCAAACCTGCATGCCATG...GGCTAGTCCATAACGCTGCTCTTCAATCTGGGCTATGGAGCAGATCACATTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| CDS-3UTR TCA 90 bp | ATCTCAACAGAAAATGGACATGGCGATGAGAAGGTTAGAAATAAAGTACCTCCCCGCTCTGAAGCAGAATaGGACTCTGATCGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISTENGHGDEKVRNKVPPRSEAE*DSDRCL Trigger: AAGGCAGCGATCAGAGTCTCATTCTGCTTCAGAGCG...GGGAGGTACTTTATTTCTAACCTTCTCATCGCCATGTCCATTTTCTGTTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCATCAGGTGATTTATGTTCTGTCCACATTGATTTTGCACCAGATGCTGTACAGGAGGCATGTTTaGTCTCTGACCCATAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFHQVIYVLSTLILHQMLYRRHV*SLTHRV Trigger: CACCCTATGGGTCAGAGAGCAAACATGCCTCCTGTA...CAGCATCTGGTGCAAAATCAATGTGGACAGAACATAAATCACCTGATGGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| CDS-3UTR GCA 90 bp | TTCCATCAGGTGATTTATGTTCTGTCCACATTGATTTTGCACCAGATGCTGCACTACAGGAGGCATGTTTaGTCTCTGACCCATAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FHQVIYVLSTLILHQMLHYRRHV*SLTHRV Trigger: CACCCTATGGGTCAGAGAGCAAACATGCCTCCTGTA...GTGCAGCATCTGGTGCAAAATCAATGTGGACAGAACATAAATCACCTGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| CDS-3UTR GCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTATTTTGCACCAGATGCTaGACCTGCTGCTACATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLFCTRC*TCCYIH Trigger: ATGGATGTAGCAGCAGGTGCAGCATCTGGTGCAAAA...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTGAGTGCAGCTGCCCATaGTCGTGCAACTCGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSECSCP*SCNSSR Trigger: TCTGGACGAGTTGCACGAGCATGGGCAGCTGCACTC...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR GCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTAGACATAGAGTGCAGCTaGCCATGCTCGTGCAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALDIECS*PCSCNS Trigger: CGAGTTGCACGAGCATGGGCAGCTGCACTCTATGTC...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | AAGACCTCCAGCAACAATGGTATTCTGGTATCCTTCAAGATCTTCAAGTTCCTTAGGGTGCATGCCCATTaGTGCATAATGCATGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTSSNNGILVSFKIFKFLRVHAH*CIMHAR Trigger: CCTGGCATGCATTATGCACCAATGGGCATGCACCCT...AAGGAACTTGAAGATCTTGAAGGATACCAGAATACCATTGTTGCTGGAGGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| CDS-3UTR CCA 90 bp | ATCTTCAAGTTCCTTAGGTTTGGCCCAGCGGGACTCCTTTGTTTGAGAATTATAAGGGGGCATCATCTGTaGCATCATTCCATGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IFKFLRFGPAGLLCLRIIRGHHL*HHSMRY Trigger: GTACCTCATGGAATGATGCCACAGATGATGCCCCCT...TATAATTCTCAAACAAAGGAGTCCCGCTGGGCCAAACCTAAGGAACTTGAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| CDS-3UTR CCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAGTAAGGCAGGTTGCATaGAAGCCTGAGACATATGAG | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLVRQVA*KPETYE Trigger: CTCATATGTCTCAGGCTTCCATGCAACCTGCCTTAC...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCTCCATCAGATACTGCTaGGCTTCAGACCAAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AIMKLPLLIHPVVPCERVSIRYC*ASDQVV Trigger: TACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGA...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTATCCATCAGATACTGCTaGGCTTCAGACCAAGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLSIRYC*ASDQVV Trigger: TACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGA...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR TCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTATGCTTTCTTCAGCTTTaGTCATGGCATGCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLCFLQL*SWHAGL Trigger: CAAACCTGCATGCCATGATCAAAGCTGAAGAAAGCA...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR TCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCAGGAACTGGGGCTGTTaGTGCTGTAGTACATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSRNWGC*CCSTFF Trigger: GAAGAATGTACTACAGCATCAACAGCCCCAGTTCCT...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAACCAGATGCTGCACCTaGTGCTACATCCATACTATT | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLTRCCT*CYIHTI Trigger: AATAGTATGGATGTAGCAGCAGGTGCAGCATCTGGT...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTTTTGCACCAGATGCTaGACCTGCTGCTACATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHFCTRC*TCCYIH Trigger: ATGGATGTAGCAGCAGGTGCAGCATCTGGTGCAAAA...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGGTAGTACATTCTTCTTaGTTGCTGCTTTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLVVHSS*LLLSSA Trigger: AGCTGAAGAAAGCAGCAAGCAAGAAGAATGTACTAC...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | AACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTTTGTGCTGCTGCAGCAGCTaGAGCAGCTGCAACAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NIDFPPLTRIFQLLLKSLCCCSS*SSCNNS Trigger: GCTGTTGTTGCAGCTGCTGCAGCTGCTGCAGCAGCA...CAAACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
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| CDS-3UTR GCA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACTTAGCAAGCTGTGCTTaGTCTTCAGTTGATACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNLASCA*SSVDTV Trigger: AACTGTATCAACTGAAGAGCAAGCACAGCTTGCTAA...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCTTATCCATCAGATACTaGTGGGCTTCAGACCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AIMKLPLLIHPVVPCERVLSIRY*WASDQV Trigger: CACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAA...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGGGAGAGTCAGATTTATaGCTCCTCTTTTTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLGESDL*LLFLLF Trigger: GAAAAGCAAAAAGAGGAGGCATAAATCTGACTCTCC...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| 3UTR CAA 72 bp | AAGTCCTTCCATCAGGTGATTTATGTTCTGTCCACATaGATTTTGCACCAGATGCTGCACCTGCTGCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: KSFHQVIYVLST*ILHQMLHLLLH Trigger: ATGTAGCAGCAGGTGCAGCATCTGGTGCAAAATCAATGTGGACAGAACATAAATCACCTGATGGAAGGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| 3UTR CAA 72 bp | AAGTTCCTTAGGTTTGGCCCAGCGGGACTCCTTTGTTaGAGAATTATAGTAATAAGGCTTCCCGGAATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KFLRFGPAGLLC*RIIVIRLPGIR Trigger: TCTGATTCCGGGAAGCCTTATTACTATAATTCTCAAACAAAGGAGTCCCGCTGGGCCAAACCTAAGGAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| 3UTR CAA 72 bp | AAGTCCTTCCATCAGGTGATTTATGTTCTGTCCACATaGATTTTGCACCAGATGCTGCACCTGTTTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSFHQVIYVLST*ILHQMLHLFAC Trigger: GCAAGCAAACAGGTGCAGCATCTGGTGCAAAATCAATGTGGACAGAACATAAATCACCTGATGGAAGGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211102.2 |
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| CDS-3UTR TCA 90 bp | ATCTCAACAGAAAATGGACATGGCGATGAGAAGGTTAGAAATAAAGTACCTCCCTGTGGCATCATTCCATaGGGTACAGGAGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISTENGHGDEKVRNKVPPCGIIP*GTGGMF Trigger: AAACATGCCTCCTGTACCTCATGGAATGATGCCACA...GGGAGGTACTTTATTTCTAACCTTCTCATCGCCATGTCCATTTTCTGTTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| CDS-3UTR TCA 90 bp | ATTTTCATTATCTACAGCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGAGCTGTGGCATCATTCCATaGGGTACAGGAGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IFIIYSSSNNGSNLRFRSCGIIP*GTGGMF Trigger: AAACATGCCTCCTGTACCTCATGGAATGATGCCACA...GCTCCTGAACCTGAGGTTACTTCCATTGTTGCTACTGCTGTAGATAATGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| CDS-3UTR TCA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCAGTCCTTCCATCAGGTaGTTTATGTTCTGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AIMKLPLLIHPVVPCERVSPSIR*FMFCPH Trigger: ATGTGGACAGAACATAAATCACCTGATGGAAGGACT...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR TCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTACATGGCATGCAGGTTTaGTTTTGTAATAAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLHGMQV*FCNKTS Trigger: GGAGGTCTTATTACAAAATCAAACCTGCATGCCATG...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | TGTATTTTCATTATCTACAGCAGTAGCAACAATGGAAGTAACCTCAGGTTCAGGGTGCATGCCCATTGGTaGATAATGCATGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CIFIIYSSSNNGSNLRFRVHAHW*IMHARM Trigger: CATCCTGGCATGCATTATGCACCAATGGGCATGCAC...CCTGAACCTGAGGTTACTTCCATTGTTGCTACTGCTGTAGATAATGAAAATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000211102.2 ENSMUST00000211712.3 |
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| CDS-3UTR GCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTATACAGGAGGCATGTTTaGTCTCTGACCCATAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALYRRHV*SLTHRV Trigger: CACCCTATGGGTCAGAGAGCAAACATGCCTCCTGTA...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | CTTACATTGAAAGGAGCCCCAAGACATGGAGTGCAACAGTGTTACCATGACTCATTAGCAAGCTGTGCTTaGTCTTCAGTTGATACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTLKGAPRHGVQQCYHDSLASCA*SSVDTV Trigger: AACTGTATCAACTGAAGAGCAAGCACAGCTTGCTAA...TGAGTCATGGTAACACTGTTGCACTCCATGTCTTGGGGCTCCTTTCAATGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR GCA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTAAATGCTTGCTTTaGCTCCTCCTTTGTATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLFKCLL*LLLCIP Trigger: TGGAATACAAAGGAGGAGGCAAAGCAAGCATTTAAA...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAATCATTTTCATAGCCTaGTCCCATGAAGCATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLIIFIA*SHEALE Trigger: CTCCAATGCTTCATGGGAGCAGGCTATGAAAATGAT...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTCTTTCGTAGCTaGTTTGCTTGTTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLFLFRS*FACSFS Trigger: AGAAAAGGAACAAGCAAAGCAGCTACGAAAGAGAAA...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTTATCCATCAGATACTaGTGGGCTTCAGACCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSLSIRY*WASDQV Trigger: CACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAA...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | AGGTTTGATTTTGTAATAAGACCTCCAGCAACAATGGTATTCTGGTATCCTTCATCATTCCAGGCATCTTaGCTGGCCCAATGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: RFDFVIRPPATMVFWYPSSFQAS*LAQWTQ Trigger: CTGTGTCCATTGGGCCAGGCAAGATGCCTGGAATGA...TGAAGGATACCAGAATACCATTGTTGCTGGAGGTCTTATTACAAAATCAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209508.3 ENSMUST00000211712.3 |
||
| CDS-3UTR CCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTAAGGGGGCATCATCTGTaGCATCATTCCATGAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALRGHHL*HHSMRY Trigger: GTACCTCATGGAATGATGCCACAGATGATGCCCCCT...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCTTTTAAGCTCTCTTGTATGGATGATGGGATATATATGACTACATATGTCGCTCCCATGAAGCATTaGAGGGCACCCGCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASFKLSCMDDGIYMTTYVAPMKH*RAPAFL Trigger: AAGAAAAGCGGGTGCCCTCCAATGCTTCATGGGAGC...GACATATGTAGTCATATATATCCCATCATCCATACAAGAGAGCTTAAAAGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR CCA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCATCCTCTGCGAACGTTaGATTATCCATCAGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: AIMKLPLLIHPVVPCERVILCER*IIHQIL Trigger: CAGTATCTGATGGATAATCCAACGTTCGCAGAGGAT...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTATGTGGCATCATTCCATaGGGTACAGGAGGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALCGIIP*GTGGMF Trigger: AAACATGCCTCCTGTACCTCATGGAATGATGCCACA...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATAGTCCTTCCATCAGGTaGTTTATGTTCTGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHSPSIR*FMFCPH Trigger: ATGTGGACAGAACATAAATCACCTGATGGAAGGACT...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATCATGGCATGCAGGTTTaGTTTTGTAATAAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHHGMQV*FCNKTS Trigger: GGAGGTCTTATTACAAAATCAAACCTGCATGCCATG...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | CTTACATTGAAAGGAGCCCCAAGACATGGAGTGCAACAGTGTTACCATGACTCATTTAAATGCTTGCTTTaGCTCCTCCTTTGTATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTLKGAPRHGVQQCYHDSFKCLL*LLLCIP Trigger: TGGAATACAAAGGAGGAGGCAAAGCAAGCATTTAAA...TGAGTCATGGTAACACTGTTGCACTCCATGTCTTGGGGCTCCTTTCAATGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCATCATTTTCATAGCCTaGTCCCATGAAGCATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSIIFIA*SHEALE Trigger: CTCCAATGCTTCATGGGAGCAGGCTATGAAAATGAT...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTAGTAAGGCAGGTTGCATaGAAGCCTGAGACATATGAG | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALVRQVA*KPETYE Trigger: CTCATATGTCTCAGGCTTCCATGCAACCTGCCTTAC...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTATATCCTCAAACGCTaGTTCCTTTACAAATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLYILKR*FLYKSF Trigger: GAAAGATTTGTAAAGGAACCAGCGTTTGAGGATATA...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCCGGGAGCGTTTCCTATaGTGCTTTTTAGATTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AIMKLPLLIHPVVPCERVRERFL*CFLDFL Trigger: TAAGAAATCTAAAAAGCACCATAGGAAACGCTCCCG...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTTCTCGTTCAGTATCTaGTTCTGGAGAGTCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSFSFSI*FWRVRF Trigger: AAATCTGACTCTCCAGAATCAGATACTGAACGAGAA...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTTCTCGTTCAGTATCTaGTTCTGGAGAGTCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHFSFSI*FWRVRF Trigger: AAATCTGACTCTCCAGAATCAGATACTGAACGAGAA...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTTAGCAAGCTGTGCTTaGTCTTCAGTTGATACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHLASCA*SSVDTV Trigger: AACTGTATCAACTGAAGAGCAAGCACAGCTTGCTAA...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCAACAGAAAATGGACATGGCGATGAGAAGGTTAGAAATAAAGTACCTCCCATCATTTTCATAGCCTaGTCCCATGAAGCATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISTENGHGDEKVRNKVPPIIFIA*SHEALE Trigger: CTCCAATGCTTCATGGGAGCAGGCTATGAAAATGAT...GGGAGGTACTTTATTTCTAACCTTCTCATCGCCATGTCCATTTTCTGTTGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR TCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTAAGTCCTTCCATCAGGTaGTTTATGTTCTGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALSPSIR*FMFCPH Trigger: ATGTGGACAGAACATAAATCACCTGATGGAAGGACT...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCATTTATAGCTATACACCAGGCCCACTTAAGAAAAATCCAAAAGACGAAGTGCTTTCTTCAGCTTTaGTCATGGCATGCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSFIAIHQAHLRKIQKTKCFLQL*SWHAGL Trigger: CAAACCTGCATGCCATGATCAAAGCTGAAGAAAGCA...CTTCGTCTTTTGGATTTTTCTTAAGTGGGCCTGGTGTATAGCTATAAATGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR GCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTAAGATGCTGCACCTGCTaGTACATCCATACTATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALRCCTC*YIHTIY Trigger: GTAAATAGTATGGATGTAGCAGCAGGTGCAGCATCT...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTACCAGATGCTGCACCTaGTGCTACATCCATACTATT | + |
|
Preference number: 4 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSTRCCT*CYIHTI Trigger: AATAGTATGGATGTAGCAGCAGGTGCAGCATCTGGT...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR GCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAATTCTTTAAATGCTTaGTTTGCCTCCTCCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLNSLNA*FASSFV Trigger: TACAAAGGAGGAGGCAAAGCAAGCATTTAAAGAATT...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTTTATCCATCAGATACTaGTGGGCTTCAGACCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSLSIRY*WASDQV Trigger: CACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAA...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR CCA 90 bp | CAGTATTGTAATAATAAGTCCTTCCATCAGGTGATTTATGTTCTGTCCACATTGGTAAGGCAGGTTGCATaGAAGCCTGAGACATATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QYCNNKSFHQVIYVLSTLVRQVA*KPETYE Trigger: CTCATATGTCTCAGGCTTCCATGCAACCTGCCTTAC...CAATGTGGACAGAACATAAATCACCTGATGGAAGGACTTATTATTACAATACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211102.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATGCAACAATGGTATTCTaGTATCCTTCAAGATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHATMVF*YPSRSS Trigger: TGAAGATCTTGAAGGATACCAGAATACCATTGTTGC...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTAGACCTCCAGCAACAATaGTATTCTGGTATCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALDLQQQ*YSGILQ Trigger: TTGAAGGATACCAGAATACCATTGTTGCTGGAGGTC...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTATATATCCTCAAACGCTaGTTCCTTTACAAATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: APLLLKVYQGSIKNTCFLYILKR*FLYKSF Trigger: GAAAGATTTGTAAAGGAACCAGCGTTTGAGGATATA...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCTATATCCTCAAACGCTaGTTCCTTTACAAATCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIMKLPLLIHPVVPCERVYILKR*FLYKSF Trigger: GAAAGATTTGTAAAGGAACCAGCGTTTGAGGATATA...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| 3UTR CAA 72 bp | CATCTTCATAGATTTCTAGACGATCACGCTCTGAAATaGCATTCCAAACTTCCATCTCCCCAAACATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLHRFLDDHALK*HSKLPSPQTFA Trigger: AGCAAATGTTTGGGGAGATGGAAGTTTGGAATGCAATTTCAGAGCGTGATCGTCTAGAAATCTATGAAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211712.3 |
||
| CDS-3UTR TCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTATTCTCGTTCAGTATCTaGTTCTGGAGAGTCAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALFSFSI*FWRVRF Trigger: AAATCTGACTCTCCAGAATCAGATACTGAACGAGAA...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTAGTAGTACATTCTTCTTaGTTGCTGCTTTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALVVHSS*LLLSSA Trigger: AGCTGAAGAAAGCAGCAAGCAAGAAGAATGTACTAC...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTATGTTTTAAGATCATCTaGCTTTTCCCAGGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALCFKII*LFPGRL Trigger: CAGTCTACCTGGGAAAAGCCAGATGATCTTAAAACA...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| 3UTR CAA 72 bp | TTTATGATCATTTTCATAGCCTGCTCCCATGAAGCATaGGAGGGCACCCGCTTTTCTTTCAATAATTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FMIIFIACSHEA*EGTRFSFNNSL Trigger: TAAAGAATTATTGAAAGAAAAGCGGGTGCCCTCCAATGCTTCATGGGAGCAGGCTATGAAAATGATCATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000211712.3 |
||
| CDS-3UTR GCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTATTTCTCTTTCGTAGCTaGTTTGCTTGTTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALFLFRS*FACSFS Trigger: AGAAAAGGAACAAGCAAAGCAGCTACGAAAGAGAAA...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR GCA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTGGAGAGTCAGATTTATaGCTCCTCTTTTTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSGESDL*LLFLLF Trigger: GAAAAGCAAAAAGAGGAGGCATAAATCTGACTCTCC...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR GCA 90 bp | AAGACCTCCAGCAACAATGGTATTCTGGTATCCTTCAAGATCTTCAAGTTCCTTTTAATTGTCAGCTGCTaGTACATCCATACTATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KTSSNNGILVSFKIFKFLLIVSC*YIHTIY Trigger: GTAAATAGTATGGATGTAGCAGCAGCTGACAATTAA...AAGGAACTTGAAGATCTTGAAGGATACCAGAATACCATTGTTGCTGGAGGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211102.2 |
||
| CDS-3UTR CCA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTAGCAACAATGGTATTCTaGTATCCTTCAAGATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HQKHLFLKSSPQKITLALATMVF*YPSRSS Trigger: TGAAGATCTTGAAGGATACCAGAATACCATTGTTGC...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CCA 90 bp | AACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTTTGATCCTCTGCGAACGTTaGATTATCCATCAGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: NIDFPPLTRIFQLLLKSLILCER*IIHQIL Trigger: CAGTATCTGATGGATAATCCAACGTTCGCAGAGGAT...CAAACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR CCA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTCGGGAGCGTTTCCTATaGTGCTTTTTAGATTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSRERFL*CFLDFL Trigger: TAAGAAATCTAAAAAGCACCATAGGAAACGCTCCCG...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR GCA 90 bp | AACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTTTGGTAGTACATTCTTCTTaGTTGCTGCTTTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIDFPPLTRIFQLLLKSLVVHSS*LLLSSA Trigger: AGCTGAAGAAAGCAGCAAGCAAGAAGAATGTACTAC...CAAACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR GCA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTTTTAAATGCTTGCTTTaGCTCCTCCTTTGTATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSFKCLL*LLLCIP Trigger: TGGAATACAAAGGAGGAGGCAAAGCAAGCATTTAAA...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR GCA 90 bp | CACAAAGTATGTCTTATATCTCAACAGAAAATGGACATGGCGATGAGAAGGTTATTTCTCTTTCGTAGCTaGTTTGCTTGTTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HKVCLISQQKMDMAMRRLFLFRS*FACSFS Trigger: AGAAAAGGAACAAGCAAAGCAGCTACGAAAGAGAAA...TAACCTTCTCATCGCCATGTCCATTTTCTGTTGAGATATAAGACATACTTTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR CCA 90 bp | AACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTTTGTGTTTTAAGATCATCTaGCTTTTCCCAGGTAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: NIDFPPLTRIFQLLLKSLCFKII*LFPGRL Trigger: CAGTCTACCTGGGAAAAGCCAGATGATCTTAAAACA...CAAACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR CCA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTGCAACAATGGTATTCTaGTATCCTTCAAGATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSATMVF*YPSRSS Trigger: TGAAGATCTTGAAGGATACCAGAATACCATTGTTGC...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCATTTATAGCTATACACCAGGCCCACTTAAGAAAAATCCAAAAGACGAAGAATTCTTTAAATGCTTaGTTTGCCTCCTCCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSFIAIHQAHLRKIQKTKNSLNA*FASSFV Trigger: TACAAAGGAGGAGGCAAAGCAAGCATTTAAAGAATT...CTTCGTCTTTTGGATTTTTCTTAAGTGGGCCTGGTGTATAGCTATAAATGAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS-3UTR GCA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTAATTCTTTAAATGCTTaGTTTGCCTCCTCCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSNSLNA*FASSFV Trigger: TACAAAGGAGGAGGCAAAGCAAGCATTTAAAGAATT...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
||
| 3UTR CAA 72 bp | AAAACTGTTTTAGTCAAGAGAATCACTTTATGTCTTTaGCTGTGTCTGATTTGCATAGGTTCATTGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTVLVKRITLCL*LCLICIGSLQG Trigger: TCCCTGCAATGAACCTATGCAAATCAGACACAGCAAAAGACATAAAGTGATTCTCTTGACTAAAACAGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| 3UTR CAA 72 bp | CTAGTGAATGAAACAGATAAATCCCACCCGAAGATTTaGCAAGACTACAAAATGTGTCATCAGAATAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVNETDKSHPKI*QDYKMCHQNKQ Trigger: CTGTTTATTCTGATGACACATTTTGTAGTCTTGCAAAATCTTCGGGTGGGATTTATCTGTTTCATTCACTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
||
| CDS CCA 90 bp | TCGAGGGCCGTCTCCTCAGGAAGCCGTCAGCAGAGACCCAAGAACTaGAGCACAGGTTTGAGCCGGACAATCTCCGCTCCCCGTCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRAVSSGSRQQRPKN*STGLSRTISAPRPR Trigger: CCGGGGACGGGGAGCGGAGATTGTCCGGCTCAAACCTGTGCTCCAGTTCTTGGGTCTCTGCTGACGGCTTCCTGAGGAGACGGCCCTCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000076313.14 ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000239398.2 |
||
| CDS GCA 90 bp | AGGAGGCATGTTTGCTCTCTGACCCATAGGGTGCATGCCCATTGGTaGATAATGCATGCCAGGATGCCCCATCGAGGGCCGTCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRHVCSLTHRVHAHW*IMHARMPHRGPSPQ Trigger: CTGAGGAGACGGCCCTCGATGGGGCATCCTGGCATGCATTATGCACCAATGGGCATGCACCCTATGGGTCAGAGAGCAAACATGCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076313.14 ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000239398.2 |
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| CDS GCA 90 bp | AGGAGGCATGTTTGCTCTCTGACCCATAGGGTGCATGCCCATTGGTaGATAATGCATGCCAGGATGCCCCATCATGAGGCCTCCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRHVCSLTHRVHAHW*IMHARMPHHEASTL Trigger: GAGCGTGGAGGCCTCATGATGGGGCATCCTGGCATGCATTATGCACCAATGGGCATGCACCCTATGGGTCAGAGAGCAAACATGCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209364.3 ENSMUST00000210789.3 ENSMUST00000211712.3 |
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| CDS CCA 90 bp | TACAGGAGGCATGTTTGCTCTCTGACCCATAGGGTGCATGCCCATTaGTGCATAATGCATGCCAGGATGCCCCATCGAGGGCCGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YRRHVCSLTHRVHAH*CIMHARMPHRGPSP Trigger: AGGAGACGGCCCTCGATGGGGCATCCTGGCATGCATTATGCACCAATGGGCATGCACCCTATGGGTCAGAGAGCAAACATGCCTCCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076313.14 ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000239398.2 |
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| CDS CCA 90 bp | TACAGGAGGCATGTTTGCTCTCTGACCCATAGGGTGCATGCCCATTaGTGCATAATGCATGCCAGGATGCCCCATCATGAGGCCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: YRRHVCSLTHRVHAH*CIMHARMPHHEAST Trigger: CGTGGAGGCCTCATGATGGGGCATCCTGGCATGCATTATGCACCAATGGGCATGCACCCTATGGGTCAGAGAGCAAACATGCCTCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209364.3 ENSMUST00000210789.3 ENSMUST00000211712.3 |
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| CDS CCA 90 bp | AGGCATTTGTCCCATTGGAGGCCCTCCCATAGGGGGCATCATCTGTaGCATCATTCCATGAGGTACAGGAGGCATGTTTGCTCTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: RHLSHWRPSHRGHHL*HHSMRYRRHVCSLT Trigger: GGTCAGAGAGCAAACATGCCTCCTGTACCTCATGGAATGATGCCACAGATGATGCCCCCTATGGGAGGGCCTCCAATGGGACAAATGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000076313.14 ENSMUST00000209364.3 ENSMUST00000210789.3 ENSMUST00000211102.2 ENSMUST00000239398.2 |
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| CDS CCA 90 bp | AAGAAATTGTCCCATTGGAGGCCCTCCCATAGGGGGCATCATCTGTaGCATCATTCCATGAGGTACAGGAGGCATGTTTGCTCTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: KKLSHWRPSHRGHHL*HHSMRYRRHVCSLT Trigger: GGTCAGAGAGCAAACATGCCTCCTGTACCTCATGGAATGATGCCACAGATGATGCCCCCTATGGGAGGGCCTCCAATGGGACAATTTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125243.3 |
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| CDS CCA 90 bp | ATCTTTTTGTCCCATTGGAGGCCCTCCCATAGGGGGCATCATCTGTaGCATCATTCCATGAGGTACAGGAGGCATGTTTGCTCTCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: IFLSHWRPSHRGHHL*HHSMRYRRHVCSLT Trigger: GGTCAGAGAGCAAACATGCCTCCTGTACCTCATGGAATGATGCCACAGATGATGCCCCCTATGGGAGGGCCTCCAATGGGACAAAAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000209508.3 ENSMUST00000211712.3 |
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| CDS-3UTR CAA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAACCCCGCGAGGGAGGTaGGCTCTCCATTTCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: APLLLKVYQGSIKNTCFLTPRGR*ALHFTH Trigger: GTGAGTGAAATGGAGAGCCAACCTCCCTCGCGGGGT...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTGCTCCCATGAAGCATaGGAGGGCACCCGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLCSHEA*EGTRFS Trigger: AGAAAAGCGGGTGCCCTCCAATGCTTCATGGGAGCA...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAAGATCAAGTGCAGTaGATCCCGGCTGACCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQKDQVQ*IPADPA Trigger: TGCTGGGTCAGCCGGGATCAACTGCACTTGATCTTT...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACAAAGATCAAGTGCAGTaGATCCCGGCTGACCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNKDQVQ*IPADPA Trigger: TGCTGGGTCAGCCGGGATCAACTGCACTTGATCTTT...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CAA 90 bp | ATCTCAACAGAAAATGGACATGGCGATGAGAAGGTTAGAAATAAAGTACCTCCCACCCCGCGAGGGAGGTaGGCTCTCCATTTCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISTENGHGDEKVRNKVPPTPRGR*ALHFTH Trigger: GTGAGTGAAATGGAGAGCCAACCTCCCTCGCGGGGT...GGGAGGTACTTTATTTCTAACCTTCTCATCGCCATGTCCATTTTCTGTTGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| CDS-3UTR CAA 90 bp | GAGAATTATAGTAATAAGGCTTCCCGGAATCAGATTTGTACTCTTTCCATGGGCACCCCGCGAGGGAGGTaGGCTCTCCATTTCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ENYSNKASRNQICTLSMGTPRGR*ALHFTH Trigger: GTGAGTGAAATGGAGAGCCAACCTCCCTCGCGGGGT...GCCCATGGAAAGAGTACAAATCTGATTCCGGGAAGCCTTATTACTATAATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 |
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| CDS-3UTR CAA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAACTGGAGCACAGGTTaGAGCCGGACAATCTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: APLLLKVYQGSIKNTCFLNWSTG*SRTISA Trigger: AGCGGAGATTGTCCGGCTCAAACCTGTGCTCCAGTT...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | GTAATAAGACCTCCAGCAACAATGGTATTCTGGTATCCTTCAAGATCTTCAAGTACCCCGCGAGGGAGGTaGGCTCTCCATTTCACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VIRPPATMVFWYPSRSSSTPRGR*ALHFTH Trigger: GTGAGTGAAATGGAGAGCCAACCTCCCTCGCGGGGT...ACTTGAAGATCTTGAAGGATACCAGAATACCATTGTTGCTGGAGGTCTTATTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125243.3 ENSMUST00000209508.3 |
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| CDS-3UTR CAA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAATTCCCGGAATCAGATTaGTACTCTTTCCATGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQFPESD*YSFHGH Trigger: ATGCCCATGGAAAGAGTACAAATCTGATTCCGGGAA...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAATTTTCTCACTCAGCTTaGCTAAAGCACTGTACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKFSHSA*LKHCTE Trigger: CTCGGTACAGTGCTTTAGCAAAGCTGAGTGAGAAAA...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAACATCCTCTGCGAACGTaGGATTATCCATCAGATACT | + |
|
Preference number: 5 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQHPLRT*DYPSDT Trigger: AGTATCTGATGGATAATCCAACGTTCGCAGAGGATG...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAATATGTTCTGTCCACATaGATTTTGCACCAGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQYVLST*ILHQML Trigger: CAGCATCTGGTGCAAAATCAATGTGGACAGAACATA...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAGTACATTCTTCTTGCTaGCTGCTTTCTTCAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKVHSSC*LLSSAL Trigger: CAAAGCTGAAGAAAGCAGCAAGCAAGAAGAATGTAC...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAGATCACGCTCTGAAATaGCATTCCAAACTTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQDHALK*HSKLPS Trigger: AGATGGAAGTTTGGAATGCAATTTCAGAGCGTGATC...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAGCTTTGCCTCCTCCTTaGTATTCCAAGTATATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TAVLVSTTAVKGLPRLHQALPPP*YSKYMF Trigger: AAACATATACTTGGAATACAAAGGAGGAGGCAAAGC...TTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACGATCACGCTCTGAAATaGCATTCCAAACTTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNDHALK*HSKLPS Trigger: AGATGGAAGTTTGGAATGCAATTTCAGAGCGTGATC...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGGATCACGCTCTGAAATaGCATTCCAAACTTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLDHALK*HSKLPS Trigger: AGATGGAAGTTTGGAATGCAATTTCAGAGCGTGATC...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAATCTTTCGTAGCTGCTTaGCTTGTTCCTTTTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QQCSLAPLLLKVYQGSIKSFVAA*LVPFLS Trigger: AGAAAGAAAAGGAACAAGCAAAGCAGCTACGAAAGA...TTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGGCGGGACTCCTTTGTTaGAGAATTATAGTAATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLAGLLC*RIIVIR Trigger: CCTTATTACTATAATTCTCAAACAAAGGAGTCCCGC...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CAGTGCTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACGCGGGACTCCTTTGTTaGAGAATTATAGTAATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QCSLAPLLLKVYQGSIKNAGLLC*RIIVIR Trigger: CCTTATTACTATAATTCTCAAACAAAGGAGTCCCGC...GTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAGCACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CACAAAGTATGTCTTATATCTCAACAGAAAATGGACATGGCGATGAGAAGGTTATGCTCCCATGAAGCATaGGAGGGCACCCGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HKVCLISQQKMDMAMRRLCSHEA*EGTRFS Trigger: AGAAAAGCGGGTGCCCTCCAATGCTTCATGGGAGCA...TAACCTTCTCATCGCCATGTCCATTTTCTGTTGAGATATAAGACATACTTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| CDS-3UTR CAA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTATTTTCTCACTCAGCTTaGCTAAAGCACTGTACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: APLLLKVYQGSIKNTCFLFSHSA*LKHCTE Trigger: CTCGGTACAGTGCTTTAGCAAAGCTGAGTGAGAAAA...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | ACATTGAAAGGAGCCCCAAGACATGGAGTGCAACAGTGTTACCATGACTCATCCATTTGCTCAGCTTTTTaGTATCTGGTTGTGGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TLKGAPRHGVQQCYHDSSICSAF*YLVVEV Trigger: GACTTCCACAACCAGATACAAAAAAGCTGAGCAAAT...GGATGAGTCATGGTAACACTGTTGCACTCCATGTCTTGGGGCTCCTTTCAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| CDS-3UTR CAA 90 bp | AAGACCTCCAGCAACAATGGTATTCTGGTATCCTTCAAGATCTTCAAGTTCCTTTTCTGTGGAAAGAAATaGTCCCATTGGAGGCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KTSSNNGILVSFKIFKFLFCGKK*SHWRPS Trigger: GGAGGGCCTCCAATGGGACAATTTCTTTCCACAGAA...AAGGAACTTGAAGATCTTGAAGGATACCAGAATACCATTGTTGCTGGAGGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125243.3 |
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| CDS CCA 90 bp | TACAAATCTTTCCCGGATATCTTCCCAGACAGCATCCAGTTCTATTaGAGGGGTAGCCTGTTTCAACATACTCTTAAAGGCAGACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YKSFPDIFPDSIQFY*RGSLFQHTLKGRLF Trigger: AAAGAGTCTGCCTTTAAGAGTATGTTGAAACAGGCTACCCCTCCAATAGAACTGGATGCTGTCTGGGAAGATATCCGGGAAAGATTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076313.14 ENSMUST00000209364.3 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTTCCCGGAATCAGATTaGTACTCTTTCCATGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSFPESD*YSFHGH Trigger: ATGCCCATGGAAAGAGTACAAATCTGATTCCGGGAA...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTTCCCGGAATCAGATTaGTACTCTTTCCATGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHFPESD*YSFHGH Trigger: ATGCCCATGGAAAGAGTACAAATCTGATTCCGGGAA...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCCTGCTTTCTTCAGCTTaGATCATGGCATGCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSLLSSA*IMACRF Trigger: AAACCTGCATGCCATGATCAAAGCTGAAGAAAGCAG...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAGTACATTCTTCTTGCTaGCTGCTTTCTTCAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: APLLLKVYQGSIKNTCFLVHSSC*LLSSAL Trigger: CAAAGCTGAAGAAAGCAGCAAGCAAGAAGAATGTAC...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTTTTCTCACTCAGCTTaGCTAAAGCACTGTACCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHFSHSA*LKHCTE Trigger: CTCGGTACAGTGCTTTAGCAAAGCTGAGTGAGAAAA...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CTCGTTAGCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGCTATTGAAAGCCAACTaGATATTTCCAGCATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVSTTAVKGLPRLHQKHLLLKAN*IFPASK Trigger: TTTGGATGCTGGAAATATCAAGTTGGCTTTCAATAG...CAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGCTAACGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CAA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCTTGATCATCATCCAGTaGCTCCAAAAGGGTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AIMKLPLLIHPVVPCERVLIIIQ*LQKGSS Trigger: AGAAGAACCCTTTTGGAGCAACTGGATGATGATCAA...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CAA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAGCGGGACTCCTTTGTTaGAGAATTATAGTAATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: APLLLKVYQGSIKNTCFLAGLLC*RIIVIR Trigger: CCTTATTACTATAATTCTCAAACAAAGGAGTCCCGC...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATCCCAGCGGGACTCCTTaGTTTGAGAATTATAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QGSIKNTCFLRAHHRRSHPSGTP*FENYSN Trigger: ATTACTATAATTCTCAAACAAAGGAGTCCCGCTGGG...ATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
||
| CDS-3UTR CAA 90 bp | GCTATCATGAAATTGCCACTTTTAATCCATCCTGTAGTGCCCTGTGAAAGGGTCGCTTTGCCTCCTCCTTaGTATTCCAAGTATATGTTT | + |
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Preference number: 5 (lower is better) Translates to: AIMKLPLLIHPVVPCERVALPPP*YSKYMF Trigger: AAACATATACTTGGAATACAAAGGAGGAGGCAAAGC...GACCCTTTCACAGGGCACTACAGGATGGATTAAAAGTGGCAATTTCATGATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTATCTTTCGTAGCTGCTTaGCTTGTTCCTTTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: APLLLKVYQGSIKNTCFLSFVAA*LVPFLS Trigger: AGAAAGAAAAGGAACAAGCAAAGCAGCTACGAAAGA...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCTTGATCATCATCCAGTaGCTCCAAAAGGGTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSLIIIQ*LQKGSS Trigger: AGAAGAACCCTTTTGGAGCAACTGGATGATGATCAA...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | ACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTAAGAGCGCTTTGCCTCCTCCTTaGTATTCCAAGTATATGTTT | + |
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Preference number: 5 (lower is better) Translates to: TAVKGLPRLHQKHLFLKSALPPP*YSKYMF Trigger: AAACATATACTTGGAATACAAAGGAGGAGGCAAAGC...GCTCTTAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | GCACCACTGCTGTTAAAGGTCTACCAAGGCTCCATCAAAAACACCTGTTTCTTACTATTGAAAGCCAACTaGATATTTCCAGCATCCAAA | + |
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Preference number: 5 (lower is better) Translates to: APLLLKVYQGSIKNTCFLLLKAN*IFPASK Trigger: TTTGGATGCTGGAAATATCAAGTTGGCTTTCAATAG...TAAGAAACAGGTGTTTTTGATGGAGCCTTGGTAGACCTTTAACAGCAGTGGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTACCCAGCGGGACTCCTTaGTTTGAGAATTATAGTAAT | + |
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Preference number: 5 (lower is better) Translates to: HQKHLFLKSSPQKITLALPSGTP*FENYSN Trigger: ATTACTATAATTCTCAAACAAAGGAGTCCCGCTGGG...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CTTTCATTTATAGCTATACACCAGGCCCACTTAAGAAAAATCCAAAAGACGAAGCTGCTTTCTTCAGCTTaGATCATGGCATGCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LSFIAIHQAHLRKIQKTKLLSSA*IMACRF Trigger: AAACCTGCATGCCATGATCAAAGCTGAAGAAAGCAG...CTTCGTCTTTTGGATTTTTCTTAAGTGGGCCTGGTGTATAGCTATAAATGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| CDS-3UTR CAA 90 bp | CTTTCATTTATAGCTATACACCAGGCCCACTTAAGAAAAATCCAAAAGACGAAGCATCCTCTGCGAACGTaGGATTATCCATCAGATACT | + |
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Preference number: 5 (lower is better) Translates to: LSFIAIHQAHLRKIQKTKHPLRT*DYPSDT Trigger: AGTATCTGATGGATAATCCAACGTTCGCAGAGGATG...CTTCGTCTTTTGGATTTTTCTTAAGTGGGCCTGGTGTATAGCTATAAATGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| CDS-3UTR CAA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTCATCCTCTGCGAACGTaGGATTATCCATCAGATACT | + |
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Preference number: 5 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSHPLRT*DYPSDT Trigger: AGTATCTGATGGATAATCCAACGTTCGCAGAGGATG...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
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| CDS-3UTR CAA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTATTGATCATCATCCAGTaGCTCCAAAAGGGTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: HQKHLFLKSSPQKITLALLIIIQ*LQKGSS Trigger: AGAAGAACCCTTTTGGAGCAACTGGATGATGATCAA...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | GTCAACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTTATGTTCTGTCCACATaGATTTTGCACCAGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: VNIDFPPLTRIFQLLLKSYVLST*ILHQML Trigger: CAGCATCTGGTGCAAAATCAATGTGGACAGAACATA...ACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
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| CDS-3UTR CAA 90 bp | GCCTCTTTTAAGCTCTCTTGTATGGATGATGGGATATATATGACTACATATGTCCCCAGCGGGACTCCTTaGTTTGAGAATTATAGTAAT | + |
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Preference number: 5 (lower is better) Translates to: ASFKLSCMDDGIYMTTYVPSGTP*FENYSN Trigger: ATTACTATAATTCTCAAACAAAGGAGTCCCGCTGGG...GACATATGTAGTCATATATATCCCATCATCCATACAAGAGAGCTTAAAAGAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076313.14 |
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| CDS-3UTR CAA 90 bp | AACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTTTGCTGCTTTCTTCAGCTTaGATCATGGCATGCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: NIDFPPLTRIFQLLLKSLLLSSA*IMACRF Trigger: AAACCTGCATGCCATGATCAAAGCTGAAGAAAGCAG...CAAACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
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| CDS-3UTR CAA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTAATTTGCTCAGCTTTTTaGTATCTGGTTGTGGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: HQKHLFLKSSPQKITLALICSAF*YLVVEV Trigger: GACTTCCACAACCAGATACAAAAAAGCTGAGCAAAT...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | CATCAAAAACACCTGTTTCTTAAGAGCTCACCACAGAAGATCACATTGGCTTTATCTTTCGTAGCTGCTTaGCTTGTTCCTTTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: HQKHLFLKSSPQKITLALSFVAA*LVPFLS Trigger: AGAAAGAAAAGGAACAAGCAAAGCAGCTACGAAAGA...TAAAGCCAATGTGATCTTCTGTGGTGAGCTCTTAAGAAACAGGTGTTTTTGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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| CDS-3UTR CAA 90 bp | AACATTGATTTCCCACCCCTGACAAGGATATTTCAACTATTACTCAAAAGTTTGATTTGCTCAGCTTTTTaGTATCTGGTTGTGGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: NIDFPPLTRIFQLLLKSLICSAF*YLVVEV Trigger: GACTTCCACAACCAGATACAAAAAAGCTGAGCAAAT...CAAACTTTTGAGTAATAGTTGAAATATCCTTGTCAGGGGTGGGAAATCAATGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000076313.14 ENSMUST00000210789.3 |
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| CDS TCA 72 bp | CCCGCGAGGGAGGTTGGCTCTCCATTTCACTCACCATaGGGCCTCCACGCTCGGCTCCAGTCCCCGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PAREVGSPFHSP*GLHARLQSPAS Trigger: TGAGGCCGGGGACTGGAGCCGAGCGTGGAGGCCTCATGGTGAGTGAAATGGAGAGCCAACCTCCCTCGCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076313.14 ENSMUST00000209508.3 ENSMUST00000239398.2 |
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| CDS GCA 72 bp | GTTTGCTCTCTGACCCATAGGGTGCATGCCCATTGGTaGATAATGCATGCCAGGATGCCCCATCGAGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: VCSLTHRVHAHW*IMHARMPHRGP Trigger: CGGCCCTCGATGGGGCATCCTGGCATGCATTATGCACCAATGGGCATGCACCCTATGGGTCAGAGAGCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076313.14 ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000239398.2 |
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| CDS GCA 72 bp | GTTTGCTCTCTGACCCATAGGGTGCATGCCCATTGGTaGATAATGCATGCCAGGATGCCCCATCATGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VCSLTHRVHAHW*IMHARMPHHEA Trigger: GGCCTCATGATGGGGCATCCTGGCATGCATTATGCACCAATGGGCATGCACCCTATGGGTCAGAGAGCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209364.3 ENSMUST00000210789.3 ENSMUST00000211712.3 |
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| CDS CCA 72 bp | CATGTTTGCTCTCTGACCCATAGGGTGCATGCCCATTaGTGCATAATGCATGCCAGGATGCCCCATCGAGGG | + |
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Preference number: 6 (lower is better) Translates to: HVCSLTHRVHAH*CIMHARMPHRG Trigger: CCCTCGATGGGGCATCCTGGCATGCATTATGCACCAATGGGCATGCACCCTATGGGTCAGAGAGCAAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076313.14 ENSMUST00000125243.3 ENSMUST00000209508.3 ENSMUST00000239398.2 |
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| CDS CCA 72 bp | TCCCATTGGAGGCCCTCCCATAGGGGGCATCATCTGTaGCATCATTCCATGAGGTACAGGAGGCATGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SHWRPSHRGHHL*HHSMRYRRHVC Trigger: GCAAACATGCCTCCTGTACCTCATGGAATGATGCCACAGATGATGCCCCCTATGGGAGGGCCTCCAATGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000076313.14 ENSMUST00000125243.3 ENSMUST00000209364.3 ENSMUST00000209508.3 ENSMUST00000210789.3 ENSMUST00000211102.2 ENSMUST00000211712.3 ENSMUST00000239398.2 |
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| CDS CCA 72 bp | CATGTTTGCTCTCTGACCCATAGGGTGCATGCCCATTaGTGCATAATGCATGCCAGGATGCCCCATCATGAG | + |
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Preference number: 6 (lower is better) Translates to: HVCSLTHRVHAH*CIMHARMPHHE Trigger: CTCATGATGGGGCATCCTGGCATGCATTATGCACCAATGGGCATGCACCCTATGGGTCAGAGAGCAAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209364.3 ENSMUST00000210789.3 ENSMUST00000211712.3 |
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| CDS CCA 72 bp | TTCCCGGATATCTTCCCAGACAGCATCCAGTTCTATTaGAGGGGTAGCCTGTTTCAACATACTCTTAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: FPDIFPDSIQFY*RGSLFQHTLKG Trigger: GCCTTTAAGAGTATGTTGAAACAGGCTACCCCTCCAATAGAACTGGATGCTGTCTGGGAAGATATCCGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076313.14 ENSMUST00000209364.3 ENSMUST00000210789.3 ENSMUST00000239398.2 |
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