Pregenerated sensors for PRPF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066148Ensembl transcript IDs: ENSMUST00000084524.4
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCGCCTCTGCCTCCCAAGCTGGGATTAAAGGCATGCGCCACCACTaGCTAGCCAGTCCAGCTATCTTGCTTGCTGAATCACCCGTAGTC | + |
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Preference number: 1 (lower is better) Translates to: PASASQAGIKGMRHH*LASPAILLAESPVV Trigger: GACTACGGGTGATTCAGCAAGCAAGATAGCTGGACTGGCTAGGCAGTGGTGGCGCATGCCTTTAATCCCAGCTTGGGAGGCAGAGGCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR GCA 90 bp | TTGAACTTGCTCTGTAGACCAGGCTGGCCTCAAACTCAAGAGATCTaGCCGCCTCTGCCTCCCAAGCTGGGATTAAAGGCATGCGCCACC | + |
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Preference number: 1 (lower is better) Translates to: LNLLCRPGWPQTQEI*PPLPPKLGLKACAT Trigger: GGTGGCGCATGCCTTTAATCCCAGCTTGGGAGGCAGAGGCGGGCAGATCTCTTGAGTTTGAGGCCAGCCTGGTCTACAGAGCAAGTTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CCA 90 bp | AGGGTAGAGAAAAGGCTGTCCTTGAACTTGCTCTGTAGACCAGGCTaGCCTCAAACTCAAGAGATCTGCCCGCCTCTGCCTCCCAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: RVEKRLSLNLLCRPG*PQTQEICPPLPPKL Trigger: CAGCTTGGGAGGCAGAGGCGGGCAGATCTCTTGAGTTTGAGGCCAGCCTGGTCTACAGAGCAAGTTCAAGGACAGCCTTTTCTCTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR TCA 90 bp | AGGCATGCGCCACCACTGCCTAGCCAGTCCAGCTATCTTGCTTGCTaGATCACCCGTAGTCCCAAGCACATACCATGTTATAGAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: RHAPPLPSQSSYLAC*ITRSPKHIPCYREP Trigger: TGGCTCTCTATAACATGGTATGTGCTTGGGACTACGGGTGATTCAGCAAGCAAGATAGCTGGACTGGCTAGGCAGTGGTGGCGCATGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR TCA 90 bp | GTGTTAGTCACCACAATACCTGTTAGAGACAGCTGGAGGGGAGGTTaGTTGGGGCTCAAGGTTTCAGAGGGTACAGAGCACAGGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: VLVTTIPVRDSWRGG*LGLKVSEGTEHREE Trigger: CTCCTCCCTGTGCTCTGTACCCTCTGAAACCTTGAGCCCCAATCAACCTCCCCTCCAGCTGTCTCTAACAGGTATTGTGGTGACTAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CCA 90 bp | AAATGGAAAAAGTCCAAGAAGGAATTTCTCCTCCTCCAGAGACCCTaGCCCAAGGAAGCAGATGCTGGAGCCGAGGCTCAGCCTAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: KWKKSKKEFLLLQRP*PKEADAGAEAQPRV Trigger: AACCCTAGGCTGAGCCTCGGCTCCAGCATCTGCTTCCTTGGGCCAGGGTCTCTGGAGGAGGAGAAATTCCTTCTTGGACTTTTTCCATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR TCA 90 bp | GGTTTCATTCTCGGCGTCAGGAAAGGAGCTCGCCACAAATGGTGGTaGCATGTCCTCATAACTGGGGAGATTTCAAATACAGTCCAGCTA | + |
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Preference number: 1 (lower is better) Translates to: GFILGVRKGARHKWW*HVLITGEISNTVQL Trigger: TAGCTGGACTGTATTTGAAATCTCCCCAGTTATGAGGACATGTCACCACCATTTGTGGCGAGCTCCTTTCCTGACGCCGAGAATGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR GCA 90 bp | TGTACCAGCCAGGTCCTATGTCCTGAGGGTTTAATGGCACAACAGTaGCGGGATATTTCAGAATCAAATCCTAGCAAGCAGTCTCACCCA | + |
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Preference number: 1 (lower is better) Translates to: CTSQVLCPEGLMAQQ*RDISESNPSKQSHP Trigger: TGGGTGAGACTGCTTGCTAGGATTTGATTCTGAAATATCCCGGCACTGTTGTGCCATTAAACCCTCAGGACATAGGACCTGGCTGGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR TCA 90 bp | GAAAGAACGGTCACAATCCTGAGTGTGAGGGAGGAGGCAGGGCACTaGAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: ERTVTILSVREEAGH*KVLSLYNIYSFWQN Trigger: GTTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTTCAGTGCCCTGCCTCCTCCCTCACACTCAGGATTGTGACCGTTCTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR TCA 90 bp | GACAGTGGTTCTGCCATTCAGAATCCACTATTTTCTTACAGTGGTTaGAGAAATGGATTACTTCCCCAGACACTTGCTCGGCCTAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: DSGSAIQNPLFSYSG*RNGLLPQTLARPKA Trigger: AGCCTTAGGCCGAGCAAGTGTCTGGGGAAGTAATCCATTTCTTCAACCACTGTAAGAAAATAGTGGATTCTGAATGGCAGAACCACTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR TCA 90 bp | GTAAAGGTACCCACATTTCCTCCTGAGACTATCACCTGTCTCCATTaGCCTCATCAGGTAATTGCACTGATAGTGAACCTCACATTTCCT | + |
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Preference number: 1 (lower is better) Translates to: VKVPTFPPETITCLH*PHQVIALIVNLTFP Trigger: AGGAAATGTGAGGTTCACTATCAGTGCAATTACCTGATGAGGTCAATGGAGACAGGTGATAGTCTCAGGAGGAAATGTGGGTACCTTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CCA 90 bp | GAGCAGGGCAGAACAGGAAGCCGATGGTGTGTAAACTTCCAATTCTaGAGAGGGAATTTCACACTATACACAACCTTCTCTGAAATTACT | + |
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Preference number: 1 (lower is better) Translates to: EQGRTGSRWCVNFQF*RGNFTLYTTFSEIT Trigger: AGTAATTTCAGAGAAGGTTGTGTATAGTGTGAAATTCCCTCTCCAGAATTGGAAGTTTACACACCATCGGCTTCCTGTTCTGCCCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CCA 90 bp | AGGAAACATGATAGAACACAATACAATTCTTTTCCTTTGAGGAAATaGCTCCGTCGTGAGAACACAAGTTCTGAGTCCTTCCGTGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: RKHDRTQYNSFPLRK*LRRENTSSESFRGL Trigger: CAGACCACGGAAGGACTCAGAACTTGTGTTCTCACGACGGAGCCATTTCCTCAAAGGAAAAGAATTGTATTGTGTTCTATCATGTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR TCA 90 bp | TATTTGGCAGGAAACATGATAGAACACAATACAATTCTTTTCCTTTaGGGAAATGGCTCCGTCGTGAGAACACAAGTTCTGAGTCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: YLAGNMIEHNTILFL*GNGSVVRTQVLSPS Trigger: GGAAGGACTCAGAACTTGTGTTCTCACGACGGAGCCATTTCCTCAAAGGAAAAGAATTGTATTGTGTTCTATCATGTTTCCTGCCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CCA 90 bp | AGGCTTCCTCAAGAGTGGGCTGATGTGAAAATCCAATCCAACACATaGTATTTGGCAGGAAACATGATAGAACACAATACAATTCTTTTC | + |
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Preference number: 1 (lower is better) Translates to: RLPQEWADVKIQSNT*YLAGNMIEHNTILF Trigger: GAAAAGAATTGTATTGTGTTCTATCATGTTTCCTGCCAAATACCATGTGTTGGATTGGATTTTCACATCAGCCCACTCTTGAGGAAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR TCA 90 bp | TCACCACACCAGAGCATACCAGGAAGCAGAGGGCAGCTGGAGATAGAAGCTGGGGAACCCAGACACACCTaGAAACCTGGTGTTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SPHQSIPGSRGQLEIEAGEPRHT*KPGVLL Trigger: CAGGAGAACACCAGGTTTTCAGGTGTGTCTGGGTTC...CCCAGCTTCTATCTCCAGCTGCCCTCTGCTTCCTGGTATGCTCTGGTGTGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTGGAGGGGAGGTTGATTGGGGCTCAAGGTTTCAGAGGGTACAGAGCACACGCCACAAATGGTGGTaGCATGTCCTCATAACTGGG | + |
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Preference number: 2 (lower is better) Translates to: TAGGEVDWGSRFQRVQSTRHKWW*HVLITG Trigger: CCCAGTTATGAGGACATGTCACCACCATTTGTGGCG...TGTGCTCTGTACCCTCTGAAACCTTGAGCCCCAATCAACCTCCCCTCCAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CAA 90 bp | GGGATTAAAGGCATGCGCCACCACTGCCTAGCCAGTCCAGCTATCTaGCTTGCTGAATCACCCGTAGTCCCAAGCACATACCATGTTATA | + |
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Preference number: 2 (lower is better) Translates to: GIKGMRHHCLASPAI*LAESPVVPSTYHVI Trigger: TATAACATGGTATGTGCTTGGGACTACGGGTGATTCAGCAAGCAAGATAGCTGGACTGGCTAGGCAGTGGTGGCGCATGCCTTTAATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CAA 90 bp | CCAAGGAAGCAGATGCTGGAGCCGAGGCTCAGCCTAGGGTTAACCTaGGAGTCCCTTTCCTTCAGAATACAACTTACATTCTCAGGATGC | + |
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Preference number: 2 (lower is better) Translates to: PRKQMLEPRLSLGLT*ESLSFRIQLTFSGC Trigger: GCATCCTGAGAATGTAAGTTGTATTCTGAAGGAAAGGGACTCCAAGGTTAACCCTAGGCTGAGCCTCGGCTCCAGCATCTGCTTCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR TCA 90 bp | TGGAAAAAGTCCAAGAAGGAATTTCTCCTCCTCCAGAGACCCTGGCCCAAGGAATCCTCAAGAGTGGGCTaGTGTGAAAATCCAATCCAA | + |
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Preference number: 2 (lower is better) Translates to: WKKSKKEFLLLQRPWPKESSRVG*CENPIQ Trigger: TTGGATTGGATTTTCACATCAGCCCACTCTTGAGGA...TTCCTTGGGCCAGGGTCTCTGGAGGAGGAGAAATTCCTTCTTGGACTTTTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTGGAGGGGAGGTTGATTGGGGCTCAAGGTTTCAGAGGGTACAGAGCACACTCCATAAAGCACTGTaGAATCATTTCATACTGGTT | + |
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Preference number: 2 (lower is better) Translates to: TAGGEVDWGSRFQRVQSTLHKAL*NHFILV Trigger: AACCAGTATGAAATGATTGCACAGTGCTTTATGGAG...TGTGCTCTGTACCCTCTGAAACCTTGAGCCCCAATCAACCTCCCCTCCAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR CCA 90 bp | CATGGCATCCACAGGCAGAGAGGTAAAAAGGCTGACCAGTCAGCAATCAGGCCAATCCAATCCAACACATaGTATTTGGCAGGAAACATG | + |
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Preference number: 2 (lower is better) Translates to: HGIHRQRGKKADQSAIRPIQSNT*YLAGNM Trigger: CATGTTTCCTGCCAAATACCATGTGTTGGATTGGAT...TGGCCTGATTGCTGACTGGTCAGCCTTTTTACCTCTCTGCCTGTGGATGCCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTGGAGGGGAGGTTGATTGGGGCTCAAGGTTTCAGAGGGTACAGAGCACAGTAAACTTCCAATTCTaGAGAGGGAATTTCACACTA | + |
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Preference number: 2 (lower is better) Translates to: TAGGEVDWGSRFQRVQSTVNFQF*RGNFTL Trigger: TAGTGTGAAATTCCCTCTCCAGAATTGGAAGTTTAC...TGTGCTCTGTACCCTCTGAAACCTTGAGCCCCAATCAACCTCCCCTCCAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR CCA 90 bp | CACTGCTTACAGCTGGGTAATTCAGCAGTTATTCAAGTCCACCCAGCAACCTTAAGTTCTAGGACAGCCTaGGCTTCACAGAGAAACCAG | + |
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Preference number: 2 (lower is better) Translates to: HCLQLGNSAVIQVHPATLSSRTA*ASQRNQ Trigger: CTGGTTTCTCTGTGAAGCCCAGGCTGTCCTAGAACT...TAAGGTTGCTGGGTGGACTTGAATAACTGCTGAATTACCCAGCTGTAAGCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR CCA 90 bp | CACTGCTTACAGCTGGGTAATTCAGCAGTTATTCAAGTCCACCCAGCAACCTTAAGTTTGAGGCCAGCCTaGTCTACAGTGAGTTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: HCLQLGNSAVIQVHPATLSLRPA*STVSSR Trigger: CCTAGAACTCACTGTAGACCAGGCTGGCCTCAAACT...TAAGGTTGCTGGGTGGACTTGAATAACTGCTGAATTACCCAGCTGTAAGCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CAA 90 bp | AAGACACAGGAGTGGGAAAAGTCCACTGTTCATAAAGTCAGTGATTaGTCCATGGCATCCACAGGCAGAGAGGTAAAAAGGCTGACCAGT | + |
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Preference number: 2 (lower is better) Translates to: KTQEWEKSTVHKVSD*SMASTGREVKRLTS Trigger: ACTGGTCAGCCTTTTTACCTCTCTGCCTGTGGATGCCATGGACAAATCACTGACTTTATGAACAGTGGACTTTTCCCACTCCTGTGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR TCA 90 bp | CACTGCTTACAGCTGGGTAATTCAGCAGTTATTCAAGTCCACCCAGCAACCTTAGTTAGTGTCTGGATGTaGCTGATGGCTTACACCTAC | + |
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Preference number: 2 (lower is better) Translates to: HCLQLGNSAVIQVHPATLVSVWM*LMAYTY Trigger: GTAGGTGTAAGCCATCAGTCACATCCAGACACTAAC...TAAGGTTGCTGGGTGGACTTGAATAACTGCTGAATTACCCAGCTGTAAGCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTCGAGACAGGGTAGAGAAAAGGCTGTCCTTGAACTTGCTCTGTAGACCAAGGCTTCCTCAAGAGTaGGCTGATGTGAAAATCCAA | + |
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Preference number: 2 (lower is better) Translates to: FPRDRVEKRLSLNLLCRPRLPQE*ADVKIQ Trigger: TTGGATTTTCACATCAGCCCACTCTTGAGGAAGCCT...TGGTCTACAGAGCAAGTTCAAGGACAGCCTTTTCTCTACCCTGTCTCGAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR TCA 90 bp | CACTGCTTACAGCTGGGTAATTCAGCAGTTATTCAAGTCCACCCAGCAACCTTAGGTGAAGCCAATCACTaGCTGATGAGGAAGAACTAT | + |
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Preference number: 2 (lower is better) Translates to: HCLQLGNSAVIQVHPATLGEANH*LMRKNY Trigger: ATAGTTCTTCCTCATCAGTCAGTGATTGGCTTCACC...TAAGGTTGCTGGGTGGACTTGAATAACTGCTGAATTACCCAGCTGTAAGCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCAATGGCCAACGTTCTCCATAAAGCACTGTGCAATCATTTCATACTGGTTCACAATTCTTTTCCTTTaGGGAAATGGCTCCGTCGTG | + |
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Preference number: 2 (lower is better) Translates to: CQWPTFSIKHCAIISYWFTILFL*GNGSVV Trigger: CACGACGGAGCCATTTCCTCAAAGGAAAAGAATTGT...GAACCAGTATGAAATGATTGCACAGTGCTTTATGGAGAACGTTGGCCATTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR GCA 90 bp | TGCCAATGGCCAACGTTCTCCATAAAGCACTGTGCAATCATTTCATACTGGTTCTTACAGGACTTGAGATaGAGAGGCAGGAGGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: CQWPTFSIKHCAIISYWFLQDLR*RGRRIL Trigger: CAAAATCCTCCTGCCTCTGCATCTCAAGTCCTGTAA...GAACCAGTATGAAATGATTGCACAGTGCTTTATGGAGAACGTTGGCCATTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCAATGGCCAACGTTCTCCATAAAGCACTGTGCAATCATTTCATACTGGTTCGATGAGGAAGAACTATaGAACCCAGACACACCTGAA | + |
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Preference number: 2 (lower is better) Translates to: CQWPTFSIKHCAIISYWFDEEEL*NPDTPE Trigger: TTCAGGTGTGTCTGGGTTCCATAGTTCTTCCTCATC...GAACCAGTATGAAATGATTGCACAGTGCTTTATGGAGAACGTTGGCCATTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CAA 90 bp | TATTTTCTTACAGTGGTTGAAGAAATGGATTACTTCCCCAGACACTaGCTCGGCCTAAGGCTTACATGGAACATTTCCAACTCGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: YFLTVVEEMDYFPRH*LGLRLTWNISNSNA Trigger: AGCATTCGAGTTGGAAATGTTCCATGTAAGCCTTAGGCCGAGCAAGTGTCTGGGGAAGTAATCCATTTCTTCAACCACTGTAAGAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR CCA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGACATGTCCTCATAACTaGGGAGATTTCAAATACAGT | + |
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Preference number: 2 (lower is better) Translates to: TSKPKGRGSNLALTRPSVTCPHN*GDFKYS Trigger: ACTGTATTTGAAATCTCCCCAGTTATGAGGACATGT...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CAA 90 bp | GTATTTGGCAGGAAACATGATAGAACACAATACAATTCTTTTCCTTaGAGGAAATGGCTCCGTCGTGAGAACACAAGTTCTGAGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: VFGRKHDRTQYNSFP*RKWLRRENTSSESF Trigger: GAAGGACTCAGAACTTGTGTTCTCACGACGGAGCCATTTCCTCAAAGGAAAAGAATTGTATTGTGTTCTATCATGTTTCCTGCCAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR TCA 90 bp | AGTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTAGAAAAGGCTGTCCTTaGACTTGCTCTGTAGACCAG | + |
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Preference number: 2 (lower is better) Translates to: SKILLSASVCVCVCMYVCRKGCP*TCSVDQ Trigger: CTGGTCTACAGAGCAAGTTCAAGGACAGCCTTTTCT...ACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR CCA 90 bp | TGCCAATGGCCAACGTTCTCCATAAAGCACTGTGCAATCATTTCATACTGGTTCATACTTGGTTATGACTaGAATCACATGTTTAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: CQWPTFSIKHCAIISYWFILGYD*NHMFSW Trigger: CCAGCTAAACATGTGATTCCAGTCATAACCAAGTAT...GAACCAGTATGAAATGATTGCACAGTGCTTTATGGAGAACGTTGGCCATTGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR TCA 90 bp | TGTGTAAACTTCCAATTCTGGAGAGGGAATTTCACACTATACACAACCTTCTCTAAGAGTGGGCTGATGTaGAAATCCAATCCAACACAT | + |
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Preference number: 2 (lower is better) Translates to: CVNFQFWRGNFTLYTTFSKSGLM*KSNPTH Trigger: ATGTGTTGGATTGGATTTTCACATCAGCCCACTCTT...AGAGAAGGTTGTGTATAGTGTGAAATTCCCTCTCCAGAATTGGAAGTTTACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR GCA 72 bp | CTCTGTAGACCAGGCTGGCCTCAAACTCAAGAGATCTaGCCGCCTCTGCCTCCCAAGCTGGGATTAAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: LCRPGWPQTQEI*PPLPPKLGLKA Trigger: TGCCTTTAATCCCAGCTTGGGAGGCAGAGGCGGGCAGATCTCTTGAGTTTGAGGCCAGCCTGGTCTACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CCA 72 bp | GCAGAGGCAAGCGGATCTCTGAGTTTGAGGCCAGCCTaGTCTACAGTGAGTTCTAGGACAGCCTGGGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: AEASGSLSLRPA*STVSSRTAWAS Trigger: TGAAGCCCAGGCTGTCCTAGAACTCACTGTAGACCAGGCTGGCCTCAAACTCAGAGATCCGCTTGCCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CCA 72 bp | AAAAGGCTGTCCTTGAACTTGCTCTGTAGACCAGGCTaGCCTCAAACTCAAGAGATCTGCCCGCCTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: KRLSLNLLCRPG*PQTQEICPPLP Trigger: AGGCAGAGGCGGGCAGATCTCTTGAGTTTGAGGCCAGCCTGGTCTACAGAGCAAGTTCAAGGACAGCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTGGAGGGGAGGTTGATTGGGGCTCAAGGTTTCAGAGGGTACAGAGCACAGGAAGAGGCTCTAACTaGGCTCTAACAAGGCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: TAGGEVDWGSRFQRVQSTGRGSN*ALTRPS Trigger: ACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCC...TGTGCTCTGTACCCTCTGAAACCTTGAGCCCCAATCAACCTCCCCTCCAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR TCA 72 bp | ACCACAATACCTGTTAGAGACAGCTGGAGGGGAGGTTaGTTGGGGCTCAAGGTTTCAGAGGGTACAGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: TTIPVRDSWRGG*LGLKVSEGTEH Trigger: GTGCTCTGTACCCTCTGAAACCTTGAGCCCCAATCAACCTCCCCTCCAGCTGTCTCTAACAGGTATTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CCA 72 bp | GCAATCAGGCCACATGCCCGGTCCTGGTCTTGCCAATaGCCAACGTTCTCCATAAAGCACTGTGCAATCATT | + |
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Preference number: 3 (lower is better) Translates to: AIRPHARSWSCQ*PTFSIKHCAII Trigger: AATGATTGCACAGTGCTTTATGGAGAACGTTGGCCATTGGCAAGACCAGGACCGGGCATGTGGCCTGATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR CCA 72 bp | CATACCAGGAAGCAGAGGGCAGCTGGAGATAGAAGCTaGGCTAAAAACTTCCGACAACCCTGTGTTGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: HTRKQRAAGDRS*AKNFRQPCVGD Trigger: GTCACCAACACAGGGTTGTCGGAAGTTTTTAGCCCAGCTTCTATCTCCAGCTGCCCTCTGCTTCCTGGTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR TCA 72 bp | CTCGGCGTCAGGAAAGGAGCTCGCCACAAATGGTGGTaGCATGTCCTCATAACTGGGGAGATTTCAAATACA | + |
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Preference number: 3 (lower is better) Translates to: LGVRKGARHKWW*HVLITGEISNT Trigger: TGTATTTGAAATCTCCCCAGTTATGAGGACATGTCACCACCATTTGTGGCGAGCTCCTTTCCTGACGCCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| 3UTR TCA 72 bp | CAAGGCCAAGTGTGCAGTTCTGAGTCCCAGCTGCAGTaGACATCCTTCGTGAACACCACAGAAAGGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QGQVCSSESQLQ*TSFVNTTEREN Trigger: ATTTTCCCTTTCTGTGGTGTTCACGAAGGATGTTCACTGCAGCTGGGACTCAGAACTGCACACTTGGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR TCA 72 bp | TGCGGATTTACCGTGCAGTTCTGGAGTGCAGCAAGGTaGAGCCAATCACTGACTGATGAGGAAGAACTATGG | + |
|
Preference number: 3 (lower is better) Translates to: CGFTVQFWSAAR*SQSLTDEEELW Trigger: CCATAGTTCTTCCTCATCAGTCAGTGATTGGCTTCACCTTGCTGCACTCCAGAACTGCACGGTAAATCCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR-3UTR CAA 90 bp | CATGGCATCCACAGGCAGAGAGGTAAAAAGGCTGACCAGTCAGCAATCAGGCCACAACATCTACAGTTTTaGGCAGAACCTGAGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HGIHRQRGKKADQSAIRPQHLQF*AEPEMR Trigger: TCTCATCTCAGGTTCTGCCAAAAACTGTAGATGTTG...TGGCCTGATTGCTGACTGGTCAGCCTTTTTACCTCTCTGCCTGTGGATGCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR GCA 72 bp | CTGATGGCTTACACCTACAACTTACAGGACTTGAGATaGAGAGGCAGGAGGATTTTGACTCTGAGGCCAATC | + |
|
Preference number: 3 (lower is better) Translates to: LMAYTYNLQDLR*RGRRILTLRPI Trigger: GATTGGCCTCAGAGTCAAAATCCTCCTGCCTCTGCATCTCAAGTCCTGTAAGTTGTAGGTGTAAGCCATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR TCA 72 bp | CCCACATTTCCTCCTGAGACTATCACCTGTCTCCATTaGCCTCATCAGGTAATTGCACTGATAGTGAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: PTFPPETITCLH*PHQVIALIVNL Trigger: GAGGTTCACTATCAGTGCAATTACCTGATGAGGTCAATGGAGACAGGTGATAGTCTCAGGAGGAAATGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR GCA 72 bp | ACACTATACACAACCTTCTCTGAAATTACTGCTCTGTaGGGATTTACCGTGCAGTTCTGGAGTGCAGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TLYTTFSEITAL*GFTVQFWSAAR Trigger: CCTTGCTGCACTCCAGAACTGCACGGTAAATCCGCACAGAGCAGTAATTTCAGAGAAGGTTGTGTATAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR GCA 72 bp | CAGGTCCTATGTCCTGAGGGTTTAATGGCACAACAGTaGCGGGATATTTCAGAATCAAATCCTAGCAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QVLCPEGLMAQQ*RDISESNPSKQ Trigger: CTGCTTGCTAGGATTTGATTCTGAAATATCCCGGCACTGTTGTGCCATTAAACCCTCAGGACATAGGACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CCA 72 bp | AGGAAGAACTATGGAACCCAGACACACCTGAAAACCTaGTGTTCTCCTGGGCCAACAACTCTACGTAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RKNYGTQTHLKT*CSPGPTTLRKE Trigger: TTCTTTACGTAGAGTTGTTGGCCCAGGAGAACACCAGGTTTTCAGGTGTGTCTGGGTTCCATAGTTCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CCA 72 bp | TACTTCCCCAGACACTTGCTCGGCCTAAGGCTTACATaGAACATTTCCAACTCGAATGCTCTCTTGGATCAA | + |
|
Preference number: 3 (lower is better) Translates to: YFPRHLLGLRLT*NISNSNALLDQ Trigger: TTGATCCAAGAGAGCATTCGAGTTGGAAATGTTCCATGTAAGCCTTAGGCCGAGCAAGTGTCTGGGGAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAAAAGTCCAAGAAGGAATTTCTCCTCCTCCAGAGACCCTGGCCCAAGGAAAACTCGAATGCTCTCTaGGATCAACCGAAAATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: WKKSKKEFLLLQRPWPKENSNAL*DQPKIK Trigger: CTTAATTTTCGGTTGATCCAAGAGAGCATTCGAGTT...TTCCTTGGGCCAGGGTCTCTGGAGGAGGAGAAATTCCTTCTTGGACTTTTTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGTACAATTCTTTTCCTTaGAGGAAATGGCTCCGTCGT | + |
|
Preference number: 3 (lower is better) Translates to: TSKPKGRGSNLALTRPSVYNSFP*RKWLRR Trigger: ACGACGGAGCCATTTCCTCAAAGGAAAAGAATTGTA...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAAAAGTCCAAGAAGGAATTTCTCCTCCTCCAGAGACCCTGGCCCAAGGAAGATACAATGGCCAGATaGTTTTGTCATGAAGGATAT | + |
|
Preference number: 3 (lower is better) Translates to: WKKSKKEFLLLQRPWPKEDTMAR*FCHEGY Trigger: ATATCCTTCATGACAAAACAATCTGGCCATTGTATC...TTCCTTGGGCCAGGGTCTCTGGAGGAGGAGAAATTCCTTCTTGGACTTTTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR TCA 72 bp | ACAACTCTACGTAAAGAAGCTGTTAGTGTCTGGATGTaGCTGATGGCTTACACCTACAACTTACAGGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: TTLRKEAVSVWM*LMAYTYNLQDL Trigger: CAAGTCCTGTAAGTTGTAGGTGTAAGCCATCAGTCACATCCAGACACTAACAGCTTCTTTACGTAGAGTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR GCA 72 bp | AACTCAAATGTGCCAGATCCCGAATGCAGGGCTCTATaGCAGTCTCATCATTTTACAAACACTGTAAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: NSNVPDPECRAL*QSHHFTNTVRC Trigger: ACATCTTACAGTGTTTGTAAAATGATGAGACTGGCATAGAGCCCTGCATTCGGGATCTGGCACATTTGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CCA 72 bp | AGAACAGGAAGCCGATGGTGTGTAAACTTCCAATTCTaGAGAGGGAATTTCACACTATACACAACCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RTGSRWCVNFQF*RGNFTLYTTFS Trigger: AGAGAAGGTTGTGTATAGTGTGAAATTCCCTCTCCAGAATTGGAAGTTTACACACCATCGGCTTCCTGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CCA 72 bp | TTTCATACTGGTTCACATAGTTCCACTGCTTACAGCTaGGTAATTCAGCAGTTATTCAAGTCCACCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FHTGSHSSTAYS*VIQQLFKSTQQ Trigger: TTGCTGGGTGGACTTGAATAACTGCTGAATTACCCAGCTGTAAGCAGTGGAACTATGTGAACCAGTATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGGAGAAAAGGCTGTCCTaGAACTTGCTCTGTAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: VRFYSQQVCVCVYVCMCVEKRLS*NLLCRP Trigger: TGGTCTACAGAGCAAGTTCAAGGACAGCCTTTTCTC...CACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR TCA 72 bp | CTATACAACATCTACAGTTTTTGGCAGAACCTGAGATaGGAATTTTGTTCTAACCACGAAGGGCTTGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: LYNIYSFWQNLR*EFCSNHEGLAT Trigger: GGTAGCAAGCCCTTCGTGGTTAGAACAAAATTCTCATCTCAGGTTCTGCCAAAAACTGTAGATGTTGTATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CCA 72 bp | GATAGAACACAATACAATTCTTTTCCTTTGAGGAAATaGCTCCGTCGTGAGAACACAAGTTCTGAGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: DRTQYNSFPLRK*LRRENTSSESF Trigger: GAAGGACTCAGAACTTGTGTTCTCACGACGGAGCCATTTCCTCAAAGGAAAAGAATTGTATTGTGTTCTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CCA 72 bp | TGGTTCTGCCATTCAGAATCCACTATTTTCTTACAGTaGTTGAAGAAATGGATTACTTCCCCAGACACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: WFCHSESTIFLQ*LKKWITSPDTC Trigger: GCAAGTGTCTGGGGAAGTAATCCATTTCTTCAACCACTGTAAGAAAATAGTGGATTCTGAATGGCAGAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CCA 72 bp | CAAGAGTGGGCTGATGTGAAAATCCAATCCAACACATaGTATTTGGCAGGAAACATGATAGAACACAATACA | + |
|
Preference number: 3 (lower is better) Translates to: QEWADVKIQSNT*YLAGNMIEHNT Trigger: TGTATTGTGTTCTATCATGTTTCCTGCCAAATACCATGTGTTGGATTGGATTTTCACATCAGCCCACTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CCA 72 bp | CTACACATTTTTGCTTACCTTTGTAGCAAGCACGTCTaGCAACATCTCTCTATATTCTATGAACTAAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LHIFAYLCSKHV*QHLSIFYELRG Trigger: CCCTCTTAGTTCATAGAATATAGAGAGATGTTGCCAGACGTGCTTGCTACAAAGGTAAGCAAAAATGTGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | TCACCACACCAGAGCATACCAGGAAGCAGAGGGCAGCTGGAGATAGAAGCTGGGGGGGACCAGCCTGGGTaGGTCCAGATCTTGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPHQSIPGSRGQLEIEAGGDQPG*VQILAV Trigger: TACAGCCAAGATCTGGACCCACCCAGGCTGGTCCCC...CCCAGCTTCTATCTCCAGCTGCCCTCTGCTTCCTGGTATGCTCTGGTGTGGTGA 59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CAA 72 bp | GGCATGCGCCACCACTGCCTAGCCAGTCCAGCTATCTaGCTTGCTGAATCACCCGTAGTCCCAAGCACATAC | + |
|
Preference number: 4 (lower is better) Translates to: GMRHHCLASPAI*LAESPVVPSTY Trigger: GTATGTGCTTGGGACTACGGGTGATTCAGCAAGCAAGATAGCTGGACTGGCTAGGCAGTGGTGGCGCATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | AATCAGGCCACATGCCCGGTCCTGGTCTTGCCAATGGCCAACGTTCTCCATAAAGCCAAGACTTCTGCCTaGCGCTCACTGATGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQATCPVLVLPMANVLHKAKTSA*RSLMCS Trigger: GGAGCACATCAGTGAGCGGCAGGCAGAAGTCTTGGC...TTTATGGAGAACGTTGGCCATTGGCAAGACCAGGACCGGGCATGTGGCCTGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | ACAGCTGGAGGGGAGGTTGATTGGGGCTCAAGGTTTCAGAGGGTACAGAGCACATGGTTTTGGTTGTCGTaGAGGAGGCTCGTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGGEVDWGSRFQRVQSTWFWLS*RRLVRR Trigger: CCTCCTCACGAGCCTCCTCCACGACAACCAAAACCA...TGTGCTCTGTACCCTCTGAAACCTTGAGCCCCAATCAACCTCCCCTCCAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAAGTCCAAGAAGGAATTTCTCCTCCTCCAGAGACCCTGGCCCAAGGAATGGCCTCGAAGAGTGTaGAGGAGGCTGCAGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WKKSKKEFLLLQRPWPKEWPRRV*RRLQSG Trigger: CCCTGACTGCAGCCTCCTTCACACTCTTCGAGGCCA...TTCCTTGGGCCAGGGTCTCTGGAGGAGGAGAAATTCCTTCTTGGACTTTTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | TCACCACACCAGAGCATACCAGGAAGCAGAGGGCAGCTGGAGATAGAAGCTGGGTCAGGAATCTCCTTATaGAGACGGGCCTCCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPHQSIPGSRGQLEIEAGSGISL*RRASSK Trigger: CTTAGAGGAGGCCCGTCTCCATAAGGAGATTCCTGA...CCCAGCTTCTATCTCCAGCTGCCCTCTGCTTCCTGGTATGCTCTGGTGTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCGAGACAGGGTAGAGAAAAGGCTGTCCTTGAACTTGCTCTGTAGACCAGCCCAGGAAACGCCCTaGTGGATGCCACATTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: FPRDRVEKRLSLNLLCRPAQETP*WMPHYP Trigger: CGGGTAATGTGGCATCCATCAGGGCGTTTCCTGGGC...TGGTCTACAGAGCAAGTTCAAGGACAGCCTTTTCTCTACCCTGTCTCGAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | AATCAGGCCACATGCCCGGTCCTGGTCTTGCCAATGGCCAACGTTCTCCATAAAGAAGGTCCCACACTTTaGAGGTGTTGTCACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NQATCPVLVLPMANVLHKEGPTL*RCCHHC Trigger: GCAGTGGTGACAACACCTGCAAAGTGTGGGACCTTC...TTTATGGAGAACGTTGGCCATTGGCAAGACCAGGACCGGGCATGTGGCCTGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | TCACCACACCAGAGCATACCAGGAAGCAGAGGGCAGCTGGAGATAGAAGCTGGGGCTACACGCACTGTATaGCCTTCAATATCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SPHQSIPGSRGQLEIEAGATRTV*PSISAT Trigger: AGTGGCAGATATTGAAGGCCATACAGTGCGTGTAGC...CCCAGCTTCTATCTCCAGCTGCCCTCTGCTTCCTGGTATGCTCTGGTGTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CAA 72 bp | CCTCGAGACAGGGTAGAGAAAAGGCTGTCCTTGAACTaGCTCTGTAGACCAGGCTGGCCTCAAACTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRDRVEKRLSLN*LCRPGWPQTQE Trigger: CTCTTGAGTTTGAGGCCAGCCTGGTCTACAGAGCAAGTTCAAGGACAGCCTTTTCTCTACCCTGTCTCGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | AAGGTTTCAGAGGGTACAGAGCACAGGGAGGAGCCTGTAGCAGATGCTCACCACGCCAAAGAGCCATCTTaGTGGAAGGCAATGTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSEGTEHREEPVADAHHAKEPS*WKAMSY Trigger: GTATGACATTGCCTTCCATCAAGATGGCTCTTTGGC...GTGGTGAGCATCTGCTACAGGCTCCTCCCTGTGCTCTGTACCCTCTGAAACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | AATCAGGCCACATGCCCGGTCCTGGTCTTGCCAATGGCCAACGTTCTCCATAAAAAACGCCCTGATGGATaGCACATTACCCGAGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: NQATCPVLVLPMANVLHKKRPDG*HITRAT Trigger: TGTAGCTCGGGTAATGTGGCATCCATCAGGGCGTTT...TTTATGGAGAACGTTGGCCATTGGCAAGACCAGGACCGGGCATGTGGCCTGATT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | AATCAGGCCACATGCCCGGTCCTGGTCTTGCCAATGGCCAACGTTCTCCATAAACACCTTCAGGCTATTTaGCCCTTCATGGTACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NQATCPVLVLPMANVLHKHLQAI*PFMVPG Trigger: ACCTGGTACCATGAAGGGCCAAATAGCCTGAAGGTG...TTTATGGAGAACGTTGGCCATTGGCAAGACCAGGACCGGGCATGTGGCCTGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAAGTCCAAGAAGGAATTTCTCCTCCTCCAGAGACCCTGGCCCAAGGAACATCTGTGGAAACATTaGTCTGCCGGGCTCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKKSKKEFLLLQRPWPKEHLWKH*SAGLAF Trigger: GAAAGCGAGCCCGGCAGATCAATGTTTCCACAGATG...TTCCTTGGGCCAGGGTCTCTGGAGGAGGAGAAATTCCTTCTTGGACTTTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | AATCAGGCCACATGCCCGGTCCTGGTCTTGCCAATGGCCAACGTTCTCCATAAAATGGCCTTCAATATCTaGCACTGGTTCATCGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NQATCPVLVLPMANVLHKMAFNI*HWFIAV Trigger: GACAGCGATGAACCAGTGGCAGATATTGAAGGCCAT...TTTATGGAGAACGTTGGCCATTGGCAAGACCAGGACCGGGCATGTGGCCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | AAGGTTTCAGAGGGTACAGAGCACAGGGAGGAGCCTGTAGCAGATGCTCACCACTTCAATATCTGCCACTaGTTCATCGCTGTCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVSEGTEHREEPVADAHHFNICH*FIAVKA Trigger: AGCCTTGACAGCGATGAACCAGTGGCAGATATTGAA...GTGGTGAGCATCTGCTACAGGCTCCTCCCTGTGCTCTGTACCCTCTGAAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | CACTGCTTACAGCTGGGTAATTCAGCAGTTATTCAAGTCCACCCAGCAACCTTACATCCAGTCCCCCAGTaGCAGCCAAAGAGCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HCLQLGNSAVIQVHPATLHPVPQ*QPKSHL Trigger: AAGATGGCTCTTTGGCTGGCACTGGGGGACTGGATG...TAAGGTTGCTGGGTGGACTTGAATAACTGCTGAATTACCCAGCTGTAAGCAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGCACTGAAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAACCAAACCCGGCCAAATaGATCCAGTCCCCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRALKSVESIQHLQFLAEPNPAK*IQSPSA Trigger: GGCACTGGGGGACTGGATGCATTTGGCCGGGTTTGG...TTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTTCAGTGCCCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAAGTCCAAGAAGGAATTTCTCCTCCTCCAGAGACCCTGGCCCAAGGAATGCAGGATCTCCTCTTaGGCCTCTAAATCCCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: WKKSKKEFLLLQRPWPKECRISS*ASKSHK Trigger: CTTATGGGATTTAGAGGCTCAAGAGGAGATCCTGCA...TTCCTTGGGCCAGGGTCTCTGGAGGAGGAGAAATTCCTTCTTGGACTTTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | CATGGCATCCACAGGCAGAGAGGTAAAAAGGCTGACCAGTCAGCAATCAGGCCAGGTAGCCATTGGGGCTaGAATTTATCCCATAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: HGIHRQRGKKADQSAIRPGSHWG*NLSHRF Trigger: AAATCTATGGGATAAATTTCAGCCCCAATGGCTACC...TGGCCTGATTGCTGACTGGTCAGCCTTTTTACCTCTCTGCCTGTGGATGCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGATCACTTTGCCCTCATaGCCAGCCAGGGTCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSKPKGRGSNLALTRPSVITLPS*PARVFS Trigger: ACTGAAGACCCTGGCTGGTCATGAGGGCAAAGTGAT...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGGACTTGTGCAGCTCCTaGATCTGGGAGGTTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSKPKGRGSNLALTRPSVDLCSS*IWEVLV Trigger: AACCAGAACCTCCCAGATGCAGGAGCTGCACAAGTC...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | CATGGCATCCACAGGCAGAGAGGTAAAAAGGCTGACCAGTCAGCAATCAGGCCAACGAGACAGTGGATTTaGGATGGAATACAATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HGIHRQRGKKADQSAIRPTRQWI*DGIQLL Trigger: GAGCAATTGTATTCCATCCCAAATCCACTGTCTCGT...TGGCCTGATTGCTGACTGGTCAGCCTTTTTACCTCTCTGCCTGTGGATGCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGTGTCACCACTGCCAGTaGCAATGTGGTAGCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSKPKGRGSNLALTRPSVCHHCQ*QCGSHW Trigger: CCAATGGCTACCACATTGCCACTGGCAGTGGTGACA...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGCACTGAAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAACTCGAAGGCAAGCCTTaGCCTCTGAGTCATCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRALKSVESIQHLQFLAELEGKP*PLSHLW Trigger: CCACAGATGACTCAGAGGTCAAGGCTTGCCTTCGAG...TTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTTCAGTGCCCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | TGCCAATGGCCAACGTTCTCCATAAAGCACTGTGCAATCATTTCATACTGGTTCTGTCATAGGCACCTGTaGGCAAGAAGTCCCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: CQWPTFSIKHCAIISYWFCHRHL*ARSPHG Trigger: TCCATGGGGACTTCTTGCTCACAGGTGCCTATGACA...GAACCAGTATGAAATGATTGCACAGTGCTTTATGGAGAACGTTGGCCATTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGCACTGAAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAACTCTGCCAAGACTTCTaGCTGCCGCTCACTGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRALKSVESIQHLQFLAELCQDF*LPLTDV Trigger: CACATCAGTGAGCGGCAGGCAGAAGTCTTGGCAGAG...TTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTTCAGTGCCCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGGGTGGGTCCAGATCTTaGCTGTATTGTCATAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TSKPKGRGSNLALTRPSVGGSRS*LYCHRH Trigger: GTGCCTATGACAATACAGCCAAGATCTGGACCCACC...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGGCAAGCCTTGACCTCTaGGTCATCTGTGGAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: TSKPKGRGSNLALTRPSVASLDL*VICGNI Trigger: AATGTTTCCACAGATGACTCAGAGGTCAAGGCTTGC...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | GTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGGACCGGAGAGACTTGTaGAGCTCCTGCATCTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRFYSQQVCVCVYVCMCVDRRDL*SSCIWE Trigger: CTCCCAGATGCAGGAGCTGCACAAGTCTCTCCGGTC...CACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | TGGAAAAAGTCCAAGAAGGAATTTCTCCTCCTCCAGAGACCCTGGCCCAAGGAACGGTCATCTCCAATCTaGCTGCAGAAATTATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WKKSKKEFLLLQRPWPKERSSPI*LQKLFK Trigger: TTTGAATAATTTCTGCAGTCAGATTGGAGATGACCG...TTCCTTGGGCCAGGGTCTCTGGAGGAGGAGAAATTCCTTCTTGGACTTTTTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | AATCAGGCCACATGCCCGGTCCTGGTCTTGCCAATGGCCAACGTTCTCCATAAATATATTAATATTTCCTaGTTCAATGCCGGCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NQATCPVLVLPMANVLHKYINIS*FNAGFE Trigger: CTCAAAGCCGGCATTGAAGCAGGAAATATTAATATA...TTTATGGAGAACGTTGGCCATTGGCAAGACCAGGACCGGGCATGTGGCCTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGCACTGAAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAACACGTGGCTATGAGCTaGCCATCAGAAGAAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRALKSVESIQHLQFLAEHVAMS*PSEEMS Trigger: GGACATTTCTTCTGATGGGCAGCTCATAGCCACGTG...TTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTTCAGTGCCCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAACCTGAGATGAGATCCCAGACTCTCCTTTaGCCAGGCGTTCCCGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSVESIQHLQFLAEPEMRSQTLL*PGVPAL Trigger: AAGAGCGGGAACGCCTGGCCAAAGGAGAGTCTGGGA...TCTCATCTCAGGTTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGCACTGAAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAAGCATCTGGGAGGTTCTaGTTGTCTCAGGAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRALKSVESIQHLQFLAEASGRF*LSQESP Trigger: AGGAGATTCCTGAGACAACCAGAACCTCCCAGATGC...TTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTTCAGTGCCCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | TGCCAATGGCCAACGTTCTCCATAAAGCACTGTGCAATCATTTCATACTGGTTCAGGTTGACATCCTTCTaGTCCAACGAGACAGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CQWPTFSIKHCAIISYWFRLTSF*SNETVD Trigger: ATCCACTGTCTCGTTGGACCAGAAGGATGTCAACCT...GAACCAGTATGAAATGATTGCACAGTGCTTTATGGAGAACGTTGGCCATTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CAA 72 bp | ACAGTGGTTGAAGAAATGGATTACTTCCCCAGACACTaGCTCGGCCTAAGGCTTACATGGAACATTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TVVEEMDYFPRH*LGLRLTWNISN Trigger: GTTGGAAATGTTCCATGTAAGCCTTAGGCCGAGCAAGTGTCTGGGGAAGTAATCCATTTCTTCAACCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CAA 72 bp | GAGTGGGAAAAGTCCACTGTTCATAAAGTCAGTGATTaGTCCATGGCATCCACAGGCAGAGAGGTAAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EWEKSTVHKVSD*SMASTGREVKR Trigger: CCTTTTTACCTCTCTGCCTGTGGATGCCATGGACAAATCACTGACTTTATGAACAGTGGACTTTTCCCACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGCACTGAAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAATGGTACCAGGTTTGCTaGTACTCCTCCTTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRALKSVESIQHLQFLAEWYQVC*YSSFDF Trigger: GAAGTCAAAGGAGGAGTATCAGCAAACCTGGTACCA...TTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTTCAGTGCCCTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | TGTGTAAACTTCCAATTCTGGAGAGGGAATTTCACACTATACACAACCTTCTCTCTGCCATCCAGAGCTTaGAGGTTCTGTCATAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVNFQFWRGNFTLYTTFSLPSRA*RFCHRS Trigger: GCTCCTATGACAGAACCTTCAAGCTCTGGATGGCAG...AGAGAAGGTTGTGTATAGTGTGAAATTCCCTCTCCAGAATTGGAAGTTTACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | GGCAGGGCACTGAAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAAGTGGAAACATTGATCTaGCGGGCTCGCTTTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRALKSVESIQHLQFLAEVETLI*RARFLL Trigger: AAGAAGAAAGCGAGCCCGGCAGATCAATGTTTCCAC...TTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTTCAGTGCCCTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | GTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGAGGTGTTGTCACCACTaGCAGTGGCAATGTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VRFYSQQVCVCVYVCMCVRCCHH*QWQCGS Trigger: GCTACCACATTGCCACTGGCAGTGGTGACAACACCT...CACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAACCTGAGATGAGATACACACCCATGCTGTaGCCTTCCTGGTGCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: KSVESIQHLQFLAEPEMRYTPML*PSWCRI Trigger: GATCCTGCACCAGGAAGGCCACAGCATGGGTGTGTA...TCTCATCTCAGGTTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAACCTGAGATGAGAGGACAGACCAGAGCTTaGAAAGCCCACTCCAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSVESIQHLQFLAEPEMRGQTRA*KAHSNK Trigger: CTTGTTGGAGTGGGCTTTGCAAGCTCTGGTCTGTCC...TCTCATCTCAGGTTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGACAGTGGATTTGGGATaGAATACAATTGCTCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: TSKPKGRGSNLALTRPSVTVDLG*NTIAPT Trigger: TGTAGGAGCAATTGTATTCCATCCCAAATCCACTGT...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | CACTGCTTACAGCTGGGTAATTCAGCAGTTATTCAAGTCCACCCAGCAACCTTAGGGATGGAATACAATTaGTCCTACATTTGTGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: HCLQLGNSAVIQVHPATLGMEYN*SYICVM Trigger: CATAACACAAATGTAGGAGCAATTGTATTCCATCCC...TAAGGTTGCTGGGTGGACTTGAATAACTGCTGAATTACCCAGCTGTAAGCAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | AGTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTAATCGTCAGGCGCTTTaGTTTTGGTTGTCGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKILLSASVCVCVCMYVCNRQAL*FWLSWR Trigger: CCTCCACGACAACCAAAACCAAAGCGCCTGACGATT...ACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | TGTGTAAACTTCCAATTCTGGAGAGGGAATTTCACACTATACACAACCTTCTCTCATTGCCCTGGGGAGTaGATAATTAGCAATCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CVNFQFWRGNFTLYTTFSHCPGE*IISNPQ Trigger: TTGTGGATTGCTAATTATTCACTCCCCAGGGCAATG...AGAGAAGGTTGTGTATAGTGTGAAATTCCCTCTCCAGAATTGGAAGTTTACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR TCA 90 bp | AAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAACCTGAGATGAGACTTCAATGCCGGCTTTaGGTCCTTCTTTTCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSVESIQHLQFLAEPEMRLQCRL*VLLFPK Trigger: TTTTGGGAAAAGAAGGACTCAAAGCCGGCATTGAAG...TCTCATCTCAGGTTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CCA 90 bp | AGTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGGTCCAACGAGACAGTaGATTTGGGATGGAATACAA | + |
|
Preference number: 4 (lower is better) Translates to: SKILLSASVCVCVCMYVCGPTRQ*IWDGIQ Trigger: TTGTATTCCATCCCAAATCCACTGTCTCGTTGGACC...ACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| 3UTR CAA 72 bp | AGGAAACATGATAGAACACAATACAATTCTTTTCCTTaGAGGAAATGGCTCCGTCGTGAGAACACAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKHDRTQYNSFP*RKWLRRENTSS Trigger: AGAACTTGTGTTCTCACGACGGAGCCATTTCCTCAAAGGAAAAGAATTGTATTGTGTTCTATCATGTTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR GCA 90 bp | GTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGCATCTCCAATCTGACTaGAGAAATTATTCAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VRFYSQQVCVCVYVCMCVHLQSD*RNYSKT Trigger: GGTCTTTGAATAATTTCTGCAGTCAGATTGGAGATG...CACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS CCA 90 bp | GTCCAGGCCCATCACTTTGCCCTCATGACCAGCCAGGGTCTTCAGTaGGGACCAGCCTGGGTGGGTCCAGATCTTGGCTGTATTGTCATA | + |
|
Preference number: 5 (lower is better) Translates to: VQAHHFALMTSQGLQ*GPAWVGPDLGCIVI Trigger: TATGACAATACAGCCAAGATCTGGACCCACCCAGGCTGGTCCCCACTGAAGACCCTGGCTGGTCATGAGGGCAAAGTGATGGGCCTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CAA 90 bp | TCACCACACCAGAGCATACCAGGAAGCAGAGGGCAGCTGGAGATAGAAGCTGGGGCGCTTTGGTTTTGGTaGTCGTGGAGGAGGCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPHQSIPGSRGQLEIEAGALWFW*SWRRLV Trigger: CACGAGCCTCCTCCACGACAACCAAAACCAAAGCGC...CCCAGCTTCTATCTCCAGCTGCCCTCTGCTTCCTGGTATGCTCTGGTGTGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CAA 90 bp | ACAGCTGGAGGGGAGGTTGATTGGGGCTCAAGGTTTCAGAGGGTACAGAGCACAGGGACAGACCAGAGCTaGCAAAGCCCACTCCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: TAGGEVDWGSRFQRVQSTGTDQS*QSPLQQ Trigger: TTGTTGGAGTGGGCTTTGCAAGCTCTGGTCTGTCCC...TGTGCTCTGTACCCTCTGAAACCTTGAGCCCCAATCAACCTCCCCTCCAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS CCA 90 bp | AGCTCCTGCATCTGGGAGGTTCTGGTTGTCTCAGGAATCTCCTTATaGAGACGGGCCTCCTCTAAGCGTTTCATTGCCCTGGGGAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSCIWEVLVVSGISL*RRASSKRFIALGSE Trigger: TTCACTCCCCAGGGCAATGAAACGCTTAGAGGAGGCCCGTCTCCATAAGGAGATTCCTGAGACAACCAGAACCTCCCAGATGCAGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS CCA 90 bp | TCAAAGACCGGAGAGACTTGTGCAGCTCCTGCATCTGGGAGGTTCTaGTTGTCTCAGGAATCTCCTTATGGAGACGGGCCTCCTCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKTGETCAAPASGRF*LSQESPYGDGPPLS Trigger: GCTTAGAGGAGGCCCGTCTCCATAAGGAGATTCCTGAGACAACCAGAACCTCCCAGATGCAGGAGCTGCACAAGTCTCTCCGGTCTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS TCA 90 bp | AAGCGTGATAGGCTCTCCCAAGGCTCGAAGGCAAGCCTTGACCTCTaGGTCATCTGTGGAAACATTGATCTGCCGGGCTCGCTTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KRDRLSQGSKASLDL*VICGNIDLPGSLSS Trigger: AGAAGAAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAGGCTTGCCTTCGAGCCTTGGGAGAGCCTATCACGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS CCA 90 bp | AAACGCCCTGATGGATGCCACATTACCCGAGCTACACGCACTGTATaGCCTTCAATATCTGCCACTGGTTCATCGCTGTCAAGGCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KRPDGCHITRATRTV*PSISATGSSLSRLQ Trigger: TTGGAGCCTTGACAGCGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCGTGTAGCTCGGGTAATGTGGCATCCATCAGGGCGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS GCA 90 bp | GATCTGCCGGGCTCGCTTTCTTCTTTCAAACTCTGCCAAGACTTCTaGCTGCCGCTCACTGATGTGCTCCTCAATTTCAAACACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DLPGSLSSFKLCQDF*LPLTDVLLNFKHFS Trigger: GGAGAAGTGTTTGAAATTGAGGAGCACATCAGTGAGCGGCAGGCAGAAGTCTTGGCAGAGTTTGAAAGAAGAAAGCGAGCCCGGCAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS GCA 90 bp | CGAAGGCAAGCCTTGACCTCTGAGTCATCTGTGGAAACATTGATCTaGCGGGCTCGCTTTCTTCTTTCAAACTCTGCCAAGACTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRQALTSESSVETLI*RARFLLSNSAKTSA Trigger: GGCAGAAGTCTTGGCAGAGTTTGAAAGAAGAAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAGGCTTGCCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS GCA 90 bp | CAGCCAAAGAGCCATCTTGATGGAAGGCAATGTCATACACACCCATaGTGTGGCCTTCCTGGTGCAGGATCTCCTCTTGAGCCTCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QPKSHLDGRQCHTHP*CGLPGAGSPLEPLN Trigger: ATTTAGAGGCTCAAGAGGAGATCCTGCACCAGGAAGGCCACAGCATGGGTGTGTATGACATTGCCTTCCATCAAGATGGCTCTTTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS CCA 90 bp | CAGAAATTATTCAAAGACCGGAGAGACTTGTGCAGCTCCTGCATCTaGGAGGTTCTGGTTGTCTCAGGAATCTCCTTATGGAGACGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QKLFKDRRDLCSSCI*EVLVVSGISLWRRA Trigger: GGCCCGTCTCCATAAGGAGATTCCTGAGACAACCAGAACCTCCCAGATGCAGGAGCTGCACAAGTCTCTCCGGTCTTTGAATAATTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CAA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGTCAGGCGCTTTGGTTTaGGTTGTCGTGGAGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TSKPKGRGSNLALTRPSVSGALV*VVVEEA Trigger: AGCCTCCTCCACGACAACCAAAACCAAAGCGCCTGA...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CAA 90 bp | TGCCAATGGCCAACGTTCTCCATAAAGCACTGTGCAATCATTTCATACTGGTTCAAAGACCGGAGAGACTaGTGCAGCTCCTGCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CQWPTFSIKHCAIISYWFKDRRD*CSSCIW Trigger: CCAGATGCAGGAGCTGCACAAGTCTCTCCGGTCTTT...GAACCAGTATGAAATGATTGCACAGTGCTTTATGGAGAACGTTGGCCATTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CAA 90 bp | TGCCAATGGCCAACGTTCTCCATAAAGCACTGTGCAATCATTTCATACTGGTTCCACACTTTGCAGGTGTaGTCACCACTGCCAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CQWPTFSIKHCAIISYWFHTLQV*SPLPVA Trigger: TGCCACTGGCAGTGGTGACAACACCTGCAAAGTGTG...GAACCAGTATGAAATGATTGCACAGTGCTTTATGGAGAACGTTGGCCATTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS CCA 90 bp | GCCAGGTTGACATCCTTCTGGTCCAACGAGACAGTGGATTTGGGATaGAATACAATTGCTCCTACATTTGTGTTATGGCCTCGAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARLTSFWSNETVDLG*NTIAPTFVLWPRRV Trigger: CACTCTTCGAGGCCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCGTTGGACCAGAAGGATGTCAACCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CAA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGTCATCTGTGGAAACATaGATCTGCCGGGCTCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSKPKGRGSNLALTRPSVSSVET*ICRARF Trigger: AAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGA...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CAA 90 bp | TTTCCTCGAGACAGGGTAGAGAAAAGGCTGTCCTTGAACTTGCTCTGTAGACCATCTGGGAGGTTCTGGTaGTCTCAGGAATCTCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: FPRDRVEKRLSLNLLCRPSGRFW*SQESPY Trigger: ATAAGGAGATTCCTGAGACAACCAGAACCTCCCAGA...TGGTCTACAGAGCAAGTTCAAGGACAGCCTTTTCTCTACCCTGTCTCGAGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS GCA 90 bp | ATCCTTCTGGTCCAACGAGACAGTGGATTTGGGATGGAATACAATTaGTCCTACATTTGTGTTATGGCCTCGAAGAGTGTGAAGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLVQRDSGFGMEYN*SYICVMASKSVKEA Trigger: AGCCTCCTTCACACTCTTCGAGGCCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCGTTGGACCAGAAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CAA 90 bp | CACTGCTTACAGCTGGGTAATTCAGCAGTTATTCAAGTCCACCCAGCAACCTTACCTCTAAGCGTTTCATaGCCCTGGGGAGTGAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: HCLQLGNSAVIQVHPATLPLSVS*PWGVNN Trigger: ATTATTCACTCCCCAGGGCAATGAAACGCTTAGAGG...TAAGGTTGCTGGGTGGACTTGAATAACTGCTGAATTACCCAGCTGTAAGCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
||
| CDS-3UTR CAA 90 bp | GGCAGGGCACTGAAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAAAAATCGTCAGGCGCTTaGGTTTTGGTTGTCGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRALKSVESIQHLQFLAEKSSGA*VLVVVE Trigger: CTCCACGACAACCAAAACCAAAGCGCCTGACGATTT...TTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTTCAGTGCCCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS-3UTR CAA 90 bp | CACTGCTTACAGCTGGGTAATTCAGCAGTTATTCAAGTCCACCCAGCAACCTTACAATTGCTCCTACATTaGTGTTATGGCCTCGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: HCLQLGNSAVIQVHPATLQLLLH*CYGLEE Trigger: CTCTTCGAGGCCATAACACAAATGTAGGAGCAATTG...TAAGGTTGCTGGGTGGACTTGAATAACTGCTGAATTACCCAGCTGTAAGCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS-3UTR CAA 90 bp | ACTTCAAAGCCAAAAGGAAGAGGCTCTAACTTGGCTCTAACAAGGCCAAGTGTGAGCCAAAGAGCCATCTaGATGGAAGGCAATGTCATA | + |
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Preference number: 5 (lower is better) Translates to: TSKPKGRGSNLALTRPSVSQRAI*MEGNVI Trigger: TATGACATTGCCTTCCATCAAGATGGCTCTTTGGCT...CACACTTGGCCTTGTTAGAGCCAAGTTAGAGCCTCTTCCTTTTGGCTTTGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS-3UTR CAA 90 bp | AGTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGCACAAGAGGCCAGGTaGACATCCTTCTGGTCCAAC | + |
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Preference number: 5 (lower is better) Translates to: SKILLSASVCVCVCMYVCAQEAR*TSFWSN Trigger: GTTGGACCAGAAGGATGTCAACCTGGCCTCTTGTGC...ACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS-3UTR CAA 90 bp | AAAAGTGTTGAGTCTATACAACATCTACAGTTTTTGGCAGAACCTGAGATGAGAAACGGTCATAACAGGTaGTGCCCAGGAAACGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: KSVESIQHLQFLAEPEMRNGHNR*CPGNAL Trigger: CAGGGCGTTTCCTGGGCACAACCTGTTATGACCGTT...TCTCATCTCAGGTTCTGCCAAAAACTGTAGATGTTGTATAGACTCAACACTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS-3UTR CAA 90 bp | AGTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTCGAAGGTCCCACACTTaGCAGGTGTTGTCACCACTG | + |
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Preference number: 5 (lower is better) Translates to: SKILLSASVCVCVCMYVCRRSHT*QVLSPL Trigger: CAGTGGTGACAACACCTGCAAAGTGTGGGACCTTCG...ACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS-3UTR CAA 90 bp | CACTGCTTACAGCTGGGTAATTCAGCAGTTATTCAAGTCCACCCAGCAACCTTATGGGATGGAATACAATaGCTCCTACATTTGTGTTAT | + |
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Preference number: 5 (lower is better) Translates to: HCLQLGNSAVIQVHPATLWDGIQ*LLHLCY Trigger: ATAACACAAATGTAGGAGCAATTGTATTCCATCCCA...TAAGGTTGCTGGGTGGACTTGAATAACTGCTGAATTACCCAGCTGTAAGCAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS-3UTR CAA 90 bp | GTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTGAACGAGACAGTGGATTaGGGATGGAATACAATTGCT | + |
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Preference number: 5 (lower is better) Translates to: VRFYSQQVCVCVYVCMCVNETVD*GWNTIA Trigger: AGCAATTGTATTCCATCCCAAATCCACTGTCTCGTT...CACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS-3UTR CAA 90 bp | AGTAAGATTTTACTCTCAGCAAGTGTGTGTGTGTGTGTATGTATGTATGTGTGTTGGATAGGCTCAAATTaGACACCGGTCACTAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: SKILLSASVCVCVCMYVCWIGSN*TPVTKF Trigger: GAACTTAGTGACCGGTGTCAAATTTGAGCCTATCCA...ACACACATACATACATACACACACACACACACTTGCTGAGAGTAAAATCTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS TCA 72 bp | AGGCTCTCCCAAGGCTCGAAGGCAAGCCTTGACCTCTaGGTCATCTGTGGAAACATTGATCTGCCGGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: RLSQGSKASLDL*VICGNIDLPGS Trigger: CGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAGGCTTGCCTTCGAGCCTTGGGAGAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS TCA 72 bp | CCCATGCTGTGGCCTTCCTGGTGCAGGATCTCCTCTTaGGCCTCTAAATCCCATAAGCGCCATGAACGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PMLWPSWCRISS*ASKSHKRHERS Trigger: TGACCGTTCATGGCGCTTATGGGATTTAGAGGCTCAAGAGGAGATCCTGCACCAGGAAGGCCACAGCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CCA 72 bp | GGAGAGACTTGTGCAGCTCCTGCATCTGGGAGGTTCTaGTTGTCTCAGGAATCTCCTTATGGAGACGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GETCAAPASGRF*LSQESPYGDGP Trigger: AGGCCCGTCTCCATAAGGAGATTCCTGAGACAACCAGAACCTCCCAGATGCAGGAGCTGCACAAGTCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CAA 72 bp | GAGACTTGTGCAGCTCCTGCATCTGGGAGGTTCTGGTaGTCTCAGGAATCTCCTTATGGAGACGGGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ETCAAPASGRFW*SQESPYGDGPP Trigger: AGGAGGCCCGTCTCCATAAGGAGATTCCTGAGACAACCAGAACCTCCCAGATGCAGGAGCTGCACAAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CAA 90 bp | TCTCCAAAAAGCGTGATAGGCTCTCCCAAGGCTCGAAGGCAAGCCTaGACCTCTGAGTCATCTGTGGAAACATTGATCTGCCGGGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: SPKSVIGSPKARRQA*TSESSVETLICRAR Trigger: GCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAGGCTTGCCTTCGAGCCTTGGGAGAGCCTATCACGCTTTTTGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CAA 90 bp | AAGACCGGAGAGACTTGTGCAGCTCCTGCATCTGGGAGGTTCTGGTaGTCTCAGGAATCTCCTTATGGAGACGGGCCTCCTCTAAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: KTGETCAAPASGRFW*SQESPYGDGPPLSV Trigger: AACGCTTAGAGGAGGCCCGTCTCCATAAGGAGATTCCTGAGACAACCAGAACCTCCCAGATGCAGGAGCTGCACAAGTCTCTCCGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CCA 72 bp | TCTTCACAACGGGAGCAACTAAATCGTCAGGCGCTTTaGTTTTGGTTGTCGTGGAGGAGGCTCGTGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSQREQLNRQAL*FWLSWRRLVRR Trigger: CCTCCTCACGAGCCTCCTCCACGACAACCAAAACCAAAGCGCCTGACGATTTAGTTGCTCCCGTTGTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CCA 72 bp | ATCTGGGAGGTTCTGGTTGTCTCAGGAATCTCCTTATaGAGACGGGCCTCCTCTAAGCGTTTCATTGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: IWEVLVVSGISL*RRASSKRFIAL Trigger: CAGGGCAATGAAACGCTTAGAGGAGGCCCGTCTCCATAAGGAGATTCCTGAGACAACCAGAACCTCCCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CAA 72 bp | TTCTTCACAACGGGAGCAACTAAATCGTCAGGCGCTTaGGTTTTGGTTGTCGTGGAGGAGGCTCGTGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: FFTTGATKSSGA*VLVVVEEAREE Trigger: CTCCTCACGAGCCTCCTCCACGACAACCAAAACCAAAGCGCCTGACGATTTAGTTGCTCCCGTTGTGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CAA 72 bp | AGCGTGATAGGCTCTCCCAAGGCTCGAAGGCAAGCCTaGACCTCTGAGTCATCTGTGGAAACATTGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: SVIGSPKARRQA*TSESSVETLIC Trigger: GCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAGGCTTGCCTTCGAGCCTTGGGAGAGCCTATCACGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS GCA 72 bp | TACCCGAGCTACACGCACTGTATGGCCTTCAATATCTaGCACTGGTTCATCGCTGTCAAGGCTCCAAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: YPSYTHCMAFNI*HWFIAVKAPKL Trigger: AAGCTTTGGAGCCTTGACAGCGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCGTGTAGCTCGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CCA 72 bp | TTCAAAGACCGGAGAGACTTGTGCAGCTCCTGCATCTaGGAGGTTCTGGTTGTCTCAGGAATCTCCTTATGG | + |
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Preference number: 6 (lower is better) Translates to: FKDRRDLCSSCI*EVLVVSGISLW Trigger: CCATAAGGAGATTCCTGAGACAACCAGAACCTCCCAGATGCAGGAGCTGCACAAGTCTCTCCGGTCTTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CCA 72 bp | GATGGATGCCACATTACCCGAGCTACACGCACTGTATaGCCTTCAATATCTGCCACTGGTTCATCGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: DGCHITRATRTV*PSISATGSSLS Trigger: TGACAGCGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCGTGTAGCTCGGGTAATGTGGCATCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CAA 90 bp | AAGGCTCGAAGGCAAGCCTTGACCTCTGAGTCATCTGTGGAAACATaGATCTGCCGGGCTCGCTTTCTTCTTTCAAACTCTGCCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: KARRQALTSESSVET*ICRARFLLSNSAKT Trigger: AGTCTTGGCAGAGTTTGAAAGAAGAAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAGGCTTGCCTTCGAGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS GCA 72 bp | GCCTTGACCTCTGAGTCATCTGTGGAAACATTGATCTaGCGGGCTCGCTTTCTTCTTTCAAACTCTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: ALTSESSVETLI*RARFLLSNSAK Trigger: CTTGGCAGAGTTTGAAAGAAGAAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS TCA 72 bp | TTTCAAACTCTGCCAAGACTTCTGCCTGCCGCTCACTaGTGTGCTCCTCAATTTCAAACACTTCTCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: FQTLPRLLPAAH*CAPQFQTLLRM Trigger: CATCCGGAGAAGTGTTTGAAATTGAGGAGCACATCAGTGAGCGGCAGGCAGAAGTCTTGGCAGAGTTTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS GCA 72 bp | GGCTCGCTTTCTTCTTTCAAACTCTGCCAAGACTTCTaGCTGCCGCTCACTGATGTGCTCCTCAATTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GSLSSFKLCQDF*LPLTDVLLNFK Trigger: TTTGAAATTGAGGAGCACATCAGTGAGCGGCAGGCAGAAGTCTTGGCAGAGTTTGAAAGAAGAAAGCGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS GCA 72 bp | AAATTATTCAAAGACCGGAGAGACTTGTGCAGCTCCTaGATCTGGGAGGTTCTGGTTGTCTCAGGAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: KLFKDRRDLCSS*IWEVLVVSGIS Trigger: GGAGATTCCTGAGACAACCAGAACCTCCCAGATGCAGGAGCTGCACAAGTCTCTCCGGTCTTTGAATAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CAA 72 bp | AGGCAAGCCTTGACCTCTGAGTCATCTGTGGAAACATaGATCTGCCGGGCTCGCTTTCTTCTTTCAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: RQALTSESSVET*ICRARFLLSNS Trigger: AGAGTTTGAAAGAAGAAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAGGCTTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CAA 90 bp | CATCCTTCTGGTCCAACGAGACAGTGGATTTGGGATGGAATACAATaGCTCCTACATTTGTGTTATGGCCTCGAAGAGTGTGAAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: HPSGPTRQWIWDGIQ*LLHLCYGLEECEGG Trigger: GCCTCCTTCACACTCTTCGAGGCCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCGTTGGACCAGAAGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CAA 90 bp | CAAGAGGCCAGGTTGACATCCTTCTGGTCCAACGAGACAGTGGATTaGGGATGGAATACAATTGCTCCTACATTTGTGTTATGGCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: QEARLTSFWSNETVD*GWNTIAPTFVLWPR Trigger: TCGAGGCCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCGTTGGACCAGAAGGATGTCAACCTGGCCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CAA 72 bp | CAGTGGATTTGGGATGGAATACAATTGCTCCTACATTaGTGTTATGGCCTCGAAGAGTGTGAAGGAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QWIWDGIQLLLH*CYGLEECEGGC Trigger: GCAGCCTCCTTCACACTCTTCGAGGCCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS CCA 72 bp | ACATCCTTCTGGTCCAACGAGACAGTGGATTTGGGATaGAATACAATTGCTCCTACATTTGTGTTATGGCCT | + |
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Preference number: 6 (lower is better) Translates to: TSFWSNETVDLG*NTIAPTFVLWP Trigger: AGGCCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAATCCACTGTCTCGTTGGACCAGAAGGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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| CDS TCA 72 bp | TTCAGGCTATTTGGCCCTTCATGGTACCAGGTTTGCTaGTACTCCTCCTTTGACTTCTTAGACTTTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: FRLFGPSWYQVC*YSSFDFLDFSS Trigger: TGATGAAAAGTCTAAGAAGTCAAAGGAGGAGTATCAGCAAACCTGGTACCATGAAGGGCCAAATAGCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084524.4 |
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