Pregenerated sensors for PRPF19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024735Ensembl transcript IDs: ENSMUST00000025642.14, ENSMUST00000179297.3
Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGAGGTGCTaGACTCCGACTCTGAGCACTTTACAGGGTGACCGTTCCCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: ETEQAWNSCHHWGRC*TPTLSTLQGDRSLG Trigger: CCCCAGGGAACGGTCACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| 3UTR CCA 90 bp | GGGAGGCTTCCTGGTCACTCGTGTCCCATTTCTGCTGTCCCACACTaGGCTCCCTCTCCCATGACCTTCCCCAGTCAGGGTTTCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GRLPGHSCPISAVPH*APSPMTFPSQGFWQ Trigger: CTGCCAGAAACCCTGACTGGGGAAGGTCATGGGAGAGGGAGCCCAGTGTGGGACAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 90 bp | GCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGAGGTaGTGGACTCCGACTCTGAGCACTTTACAGGGTGACCGTTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: AETEQAWNSCHHWGR*WTPTLSTLQGDRSL Trigger: CAGGGAACGGTCACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| 3UTR CCA 90 bp | TTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATaGAACAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTG | + |
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Preference number: 1 (lower is better) Translates to: LAPPPCLRRAETEQA*NSCHHWGRCWTPTL Trigger: CAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| 3UTR CCA 90 bp | ACGGCTTTCAGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTCCTaGTCACTCGTGTCCCATTTCTGCTGTCCCACACTGGGCTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: TAFRLSLISAAGEAS*SLVSHFCCPTLGSL Trigger: GAGGGAGCCCAGTGTGGGACAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR CCA 90 bp | CTCAGCAACCCACTGAGCGTCATGGCCCAGGATGCCCACCGACCCTaGCATGCTCACTGCTGCTTACAACAGTCTAGAGCAAGCTCCATC | + |
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Preference number: 1 (lower is better) Translates to: LSNPLSVMAQDAHRP*HAHCCLQQSRASSI Trigger: GATGGAGCTTGCTCTAGACTGTTGTAAGCAGCAGTGAGCATGCCAGGGTCGGTGGGCATCCTGGGCCATGACGCTCAGTGGGTTGCTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 90 bp | CCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTaGCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTA | + |
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Preference number: 1 (lower is better) Translates to: PPCLRRAETEQAWNS*HHWGRCWTPTLSTL Trigger: TAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| 3UTR CCA 90 bp | CTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTaGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: LRRAETEQAWNSCHH*GRCWTPTLSTLQGD Trigger: GTCACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| 3UTR CCA 90 bp | ACAAGTGACAGAGGCCCTGGAAACAAGGTCAAGGCTTCCGGAGCATaGAGGCCTCTGACAGACGGCTTTCAGGCTTTCCCTCATTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: TSDRGPGNKVKASGA*RPLTDGFQAFPHFC Trigger: GCAGAAATGAGGGAAAGCCTGAAAGCCGTCTGTCAGAGGCCTCCATGCTCCGGAAGCCTTGACCTTGTTTCCAGGGCCTCTGTCACTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 90 bp | GGATGTCAGTGTGAGGAACTTGTGAGAACGCACTCCAGCACTGACTaGCTCACCGCTCCAGCTTCTATGGTCACCTACCACAACTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GCQCEELVRTHSSTD*LTAPASMVTYHNSA Trigger: TGCTGAGTTGTGGTAGGTGACCATAGAAGCTGGAGCGGTGAGGCAGTCAGTGCTGGAGTGCGTTCTCACAAGTTCCTCACACTGACATCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR TCA 90 bp | AGCTGCCAGTCAAGCCAGCCAGGAATCAGTGTGTATCATCGCCCCTaGAGTATTATCCCTAGCAATCGACTCACAGCAACCCACCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SCQSSQPGISVYHRP*SIIPSNRLTATHQQ Trigger: CTGCTGGTGGGTTGCTGTGAGTCGATTGCTAGGGATAATACTTCAGGGGCGATGATACACACTGATTCCTGGCTGGCTTGACTGGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 90 bp | GAGGAATCCTTCAAGCTTCAGTCCTGCCTGGATCCTGCTTCATCTTaGCTCCCTGGCTGGACTGATGAGCTGTTGGTTTTGTGCAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: EESFKLQSCLDPASS*LPGWTDELLVLCSL Trigger: CAAGCTGCACAAAACCAACAGCTCATCAGTCCAGCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTTGAAGGATTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 90 bp | CTCCCCTCTCCCTTCACTGGCACTGCACTAGCACCTGCAGACACCTaGAGACATCAGCCCATCTCTTACTTAGTTGTTGAAACGGATTTC | + |
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Preference number: 1 (lower is better) Translates to: LPSPFTGTALAPADT*RHQPISYLVVETDF Trigger: GAAATCCGTTTCAACAACTAAGTAAGAGATGGGCTGATGTCTGCAGGTGTCTGCAGGTGCTAGTGCAGTGCCAGTGAAGGGAGAGGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR TCA 90 bp | TCCTGTACTTCCTGCCCTAACTGCATGCACTCTCTCACTGTCCTGTaGGGTGGTACTATACAAACTATGCCCTATAAGGAGGGGTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: SCTSCPNCMHSLTVL*GGTIQTMPYKEGWL Trigger: TAGCCACCCCTCCTTATAGGGCATAGTTTGTATAGTACCACCTCACAGGACAGTGAGAGAGTGCATGCAGTTAGGGCAGGAAGTACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR CCA 90 bp | AAGCTTCAGTCCTGCCTGGATCCTGCTTCATCTTGCCTCCCTGGCTaGACTGATGAGCTGTTGGTTTTGTGCAGCTTGCTTTTTGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: KLQSCLDPASSCLPG*TDELLVLCSLLFAF Trigger: AAAAGCAAAAAGCAAGCTGCACAAAACCAACAGCTCATCAGTCCAGCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR TCA 90 bp | ATCACAGATAGGGTAAATTCCAATCTCCTTGCCCACAGGACAGCCTaGCAGAACATACCCAGTTGTTCTGTTGTGTTATCAGGACCCCCT | + |
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Preference number: 1 (lower is better) Translates to: ITDRVNSNLLAHRTA*QNIPSCSVVLSGPP Trigger: AGGGGGTCCTGATAACACAACAGAACAACTGGGTATGTTCTGTCAGGCTGTCCTGTGGGCAAGGAGATTGGAATTTACCCTATCTGTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR TCA 90 bp | GGCTCCCCTGTGCACATGCCACACACTTCACACACAACTTCAGGCTaGCCAGAAAGGCTTTCCCACATCTTGTCTTTCACTATCTTTTTA | + |
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Preference number: 1 (lower is better) Translates to: GSPVHMPHTSHTTSG*PERLSHILSFTIFL Trigger: TAAAAAGATAGTGAAAGACAAGATGTGGGAAAGCCTTTCTGGTCAGCCTGAAGTTGTGTGTGAAGTGTGTGGCATGTGCACAGGGGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 90 bp | CTGAGATTGAGGCCAGCCTGGACTACAGAGTTCCAGGACAACCAGTaGTATATAGAGAATCCCTGCCCTGTTGCGAAAAACCAAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: LRLRPAWTTEFQDNQ*YIENPCPVAKNQEK Trigger: TTTTTCTTGGTTTTTCGCAACAGGGCAGGGATTCTCTATATAGCACTGGTTGTCCTGGAACTCTGTAGTCCAGGCTGGCCTCAATCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 90 bp | GCACTGAGAGGAAGGGCTCACCATGCTTGGCTTTTCTACATTAGGTaGTGGGGATTAAATTCAGCTCATGGTGACCTAGAAAGCACTTTA | + |
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Preference number: 1 (lower is better) Translates to: ALRGRAHHAWLFYIR*WGLNSAHGDLESTL Trigger: TAAAGTGCTTTCTAGGTCACCATGAGCTGAATTTAATCCCCAGCACCTAATGTAGAAAAGCCAAGCATGGTGAGCCCTTCCTCTCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR-3UTR GCA 90 bp | GAATCCTTCAAGCTTCAGTCCTGCCTGGATCCTGCTTCATCTTGCCTCCCTGGCCACCACTGGGGGAGGTaGTGGACTCCGACTCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: ESFKLQSCLDPASSCLPGHHWGR*WTPTLS Trigger: GCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTG...GCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTTGAAGGATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR CAA 90 bp | TCCGGCCCTAAGGATCCCCAAGGCACAGCTAATGGTTCCTTACCCTaGGACAGCAGCAGGACCTCCTGCTGCCCATACCTCACTTACCTC | + |
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Preference number: 2 (lower is better) Translates to: SGPKDPQGTANGSLP*DSSRTSCCPYLTYL Trigger: GAGGTAAGTGAGGTATGGGCAGCAGGAGGTCCTGCTGCTGTCCAAGGGTAAGGAACCATTAGCTGTGCCTTGGGGATCCTTAGGGCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR-3UTR CCA 90 bp | CTACCTTTCCGGCTTGTAAGAGAGGCCAAGTCAGGGAGCAAGCACAGCACAAGTTCTGCTGTCCCACACTaGGCTCCCTCTCCCATGACC | + |
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Preference number: 2 (lower is better) Translates to: LPFRLVREAKSGSKHSTSSAVPH*APSPMT Trigger: GGTCATGGGAGAGGGAGCCCAGTGTGGGACAGCAGA...ACTTGTGCTGTGCTTGCTCCCTGACTTGGCCTCTCTTACAAGCCGGAAAGGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGATGTTCTATGTGCCCTaGCTCAGACCATCATCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PVSEELKQSRHGTAATTGMFYVP*LRPSSR Trigger: TCTGGATGATGGTCTGAGCCAGGGCACATAGAACAT...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCATGTTCTATGTGCCCTaGCTCAGACCATCATCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LLLPVSEELKQSRHGTAAMFYVP*LRPSSR Trigger: TCTGGATGATGGTCTGAGCCAGGGCACATAGAACAT...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| 3UTR-3UTR CCA 90 bp | TTTTTAATGAAACTAGATCGCTGCTTACAAAACCCTGCAAGAGTCCTCCTGCCCCCTTCACAGCTCCCTTaGCTCCTCCTCCCTGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: FLMKLDRCLQNPARVLLPPSQLP*LLLPVS Trigger: TGAGACAGGGAGGAGGAGCCAAGGGAGCTGTGAAGG...GGGCAGGAGGACTCTTGCAGGGTTTTGTAAGCAGCGATCTAGTTTCATTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| 3UTR CAA 90 bp | CCTGCTTCATCTTGCCTCCCTGGCTGGACTGATGAGCTGTTGGTTTaGTGCAGCTTGCTTTTTGCTTTTGCAAGACAGGACTCTCTATGT | + |
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Preference number: 2 (lower is better) Translates to: PASSCLPGWTDELLV*CSLLFAFARQDSLC Trigger: ACATAGAGAGTCCTGTCTTGCAAAAGCAAAAAGCAAGCTGCACAAAACCAACAGCTCATCAGTCCAGCCAGGGAGGCAAGATGAAGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR-3UTR TCA 90 bp | GAATCCTTCAAGCTTCAGTCCTGCCTGGATCCTGCTTCATCTTGCCTCCCTGGCTACACTCAGCTGGATTaGTTAAGTTTTAACATCGGG | + |
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Preference number: 2 (lower is better) Translates to: ESFKLQSCLDPASSCLPGYTQLD*LSFNIG Trigger: CCCGATGTTAAAACTTAATCAATCCAGCTGAGTGTA...GCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTTGAAGGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGTTGAAACGGATTTCACATTTACCCTGTTACCGAAGAACTGTAAGACACAAGGCTCCTTGTGTCTCTaGCTCCCCAGCACTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VVETDFTFTLLPKNCKTQGSLCL*LPSTER Trigger: CCTCTCAGTGCTGGGGAGGCAGAGACACAAGGAGCC...TTGTGTCTTACAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR CAA 90 bp | AAGCGCAAGTTCAAGCTGTCAGTTCAACAGCTAAGGGACATAGTTTaGAACATCCAGAGGTTCAAATGTTCATCGGGTACAGTAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: KRKFKLSVQQLRDIV*NIQRFKCSSGTVST Trigger: AGTGCTTACTGTACCCGATGAACATTTGAACCTCTGGATGTTCAAAACTATGTCCCTTAGCTGTTGAACTGACAGCTTGAACTTGCGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGTTGAAACGGATTTCACATTTACCCTGTTACCGAAGAACTGTAAGACACAATCTAGTCTAGCTGTCTaGCCTGGGAACAGCTCTACT | + |
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Preference number: 2 (lower is better) Translates to: VVETDFTFTLLPKNCKTQSSLAV*PGNSST Trigger: AGTAGAGCTGTTCCCAGGGCAGACAGCTAGACTAGA...TTGTGTCTTACAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR-3UTR GCA 90 bp | TTGTTGAAACGGATTTCACATTTACCCTGTTACCGAAGAACTGTAAGACACAATATGTTTTATTTACTGTaGTCTAGTCTAGCTGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LLKRISHLPCYRRTVRHNMFYLL*SSLAVC Trigger: GCAGACAGCTAGACTAGAGCACAGTAAATAAAACAT...ATTGTGTCTTACAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 72 bp | GAGCAGGCATGGAACAGCTGCCACCACTGGGGGAGGTaGTGGACTCCGACTCTGAGCACTTTACAGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: EQAWNSCHHWGR*WTPTLSTLQGD Trigger: GTCACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| 3UTR GCA 72 bp | GCAGGGGAGGCTTCCTGGTCACTCGTGTCCCATTTCTaGTGTCCCACACTGGGCTCCCTCTCCCATGACCTT | + |
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Preference number: 3 (lower is better) Translates to: AGEASWSLVSHF*CPTLGSLSHDL Trigger: AAGGTCATGGGAGAGGGAGCCCAGTGTGGGACAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 72 bp | TTGGGGACCAGTTTATGCCCAGGATGTCCCAGGCCATaGCCTCAACCTCCCCTCTCCCTTCACTGGCACTGC | + |
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Preference number: 3 (lower is better) Translates to: LGTSLCPGCPRP*PQPPLSLHWHC Trigger: GCAGTGCCAGTGAAGGGAGAGGGGAGGTTGAGGGCATGGCCTGGGACATCCTGGGCATAAACTGGTCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR CCA 72 bp | CAGGCATGGAACAGCTGCCACCACTGGGGGAGGTGCTaGACTCCGACTCTGAGCACTTTACAGGGTGACCGT | + |
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Preference number: 3 (lower is better) Translates to: QAWNSCHHWGRC*TPTLSTLQGDR Trigger: ACGGTCACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTGTTCCATGCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| 3UTR CCA 72 bp | CCTGGTCACTCGTGTCCCATTTCTGCTGTCCCACACTaGGCTCCCTCTCCCATGACCTTCCCCAGTCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: PGHSCPISAVPH*APSPMTFPSQG Trigger: ACCCTGACTGGGGAAGGTCATGGGAGAGGGAGCCCAGTGTGGGACAGCAGAAATGGGACACGAGTGACCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR CCA 72 bp | CCACTGAGCGTCATGGCCCAGGATGCCCACCGACCCTaGCATGCTCACTGCTGCTTACAACAGTCTAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: PLSVMAQDAHRP*HAHCCLQQSRA Trigger: TGCTCTAGACTGTTGTAAGCAGCAGTGAGCATGCCAGGGTCGGTGGGCATCCTGGGCCATGACGCTCAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 72 bp | CCTCTGACAGACGGCTTTCAGGCTTTCCCTCATTTCTaGTGCAGGGGAGGCTTCCTGGTCACTCGTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: PLTDGFQAFPHF*CRGGFLVTRVP Trigger: TGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTCTGTCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 72 bp | GGTTCCTTACCCTTGGACAGCAGCAGGACCTCCTGCTaGCCATACCTCACTTACCTCAACCTCAGAGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: GSLPLDSSRTSC*PYLTYLNLRAF Trigger: GAAGGCTCTGAGGTTGAGGTAAGTGAGGTATGGGCAGCAGGAGGTCCTGCTGCTGTCCAAGGGTAAGGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 72 bp | ATGGCCCAGGATGCCCACCGACCCTGGCATGCTCACTaGTGCTTACAACAGTCTAGAGCAAGCTCCATCACA | + |
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Preference number: 3 (lower is better) Translates to: MAQDAHRPWHAH*CLQQSRASSIT Trigger: TGTGATGGAGCTTGCTCTAGACTGTTGTAAGCAGCAGTGAGCATGCCAGGGTCGGTGGGCATCCTGGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 72 bp | CCTCCCCTCTCCCTTCACTGGCACTGCACTAGCACCTaGAGACACCTGCAGACATCAGCCCATCTCTTACTT | + |
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Preference number: 3 (lower is better) Translates to: PPLSLHWHCTST*RHLQTSAHLLL Trigger: AAGTAAGAGATGGGCTGATGTCTGCAGGTGTCTGCAGGTGCTAGTGCAGTGCCAGTGAAGGGAGAGGGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR CCA 72 bp | AGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTCCTaGTCACTCGTGTCCCATTTCTGCTGTCCCACACTG | + |
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Preference number: 3 (lower is better) Translates to: RLSLISAAGEAS*SLVSHFCCPTL Trigger: CAGTGTGGGACAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR CCA 72 bp | ATTAGGCTGACTGGGAATGCTCCCTCATACAAGGGGTaGGTGGAGGGGTCACTCAGCGGACTTCCAGACATC | + |
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Preference number: 3 (lower is better) Translates to: IRLTGNAPSYKG*VEGSLSGLPDI Trigger: GATGTCTGGAAGTCCGCTGAGTGACCCCTCCACCCACCCCTTGTATGAGGGAGCATTCCCAGTCAGCCTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR TCA 72 bp | GAGCCTGCCAAAGGCAGAAGTCTAGATGTAGGCCTCTaGGAGGGGAGCCTGCAGAGACTCAATCCACAGACT | + |
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Preference number: 3 (lower is better) Translates to: EPAKGRSLDVGL*EGSLQRLNPQT Trigger: AGTCTGTGGATTGAGTCTCTGCAGGCTCCCCTCTCAGAGGCCTACATCTAGACTTCTGCCTTTGGCAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 72 bp | CTGACAGACGGCTTTCAGGCTTTCCCTCATTTCTGCTaGAGGGGAGGCTTCCTGGTCACTCGTGTCCCATTT | + |
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Preference number: 3 (lower is better) Translates to: LTDGFQAFPHFC*RGGFLVTRVPF Trigger: AAATGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTCTGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 72 bp | TGTGAGGAACTTGTGAGAACGCACTCCAGCACTGACTaGCTCACCGCTCCAGCTTCTATGGTCACCTACCAC | + |
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Preference number: 3 (lower is better) Translates to: CEELVRTHSSTD*LTAPASMVTYH Trigger: GTGGTAGGTGACCATAGAAGCTGGAGCGGTGAGGCAGTCAGTGCTGGAGTGCGTTCTCACAAGTTCCTCACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR TCA 72 bp | GAAACAAGGTCAAGGCTTCCGGAGCATGGAGGCCTCTaGCAGACGGCTTTCAGGCTTTCCCTCATTTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: ETRSRLPEHGGL*QTAFRLSLISA Trigger: AGCAGAAATGAGGGAAAGCCTGAAAGCCGTCTGTCAGAGGCCTCCATGCTCCGGAAGCCTTGACCTTGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR TCA 72 bp | GACCAGGCTGGCCTTGAACTCAGATCTGCCTACCACTaGGTGCTGGCATTTAAGGTGTGCACCACTACACTC | + |
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Preference number: 3 (lower is better) Translates to: DQAGLELRSAYH*VLAFKVCTTTL Trigger: GAGTGTAGTGGTGCACACCTTAAATGCCAGCACTCAGTGGTAGGCAGATCTGAGTTCAAGGCCAGCCTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR GCA 72 bp | TCTGACATTCACCTGCAGAAAGGAATTAGCACCGCCTaGTGGCTAGAGGCATGCTTTGCAGCTCAGCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SDIHLQKGISTA*WLEACFAAQPR Trigger: CCTTGGCTGAGCTGCAAAGCATGCCTCTAGCCAGCAGGCGGTGCTAATTCCTTTCTGCAGGTGAATGTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR CCA 72 bp | GACATTCACCTGCAGAAAGGAATTAGCACCGCCTGCTaGCTAGAGGCATGCTTTGCAGCTCAGCCAAGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: DIHLQKGISTAC*LEACFAAQPRY Trigger: GTACCTTGGCTGAGCTGCAAAGCATGCCTCTAGCCAGCAGGCGGTGCTAATTCCTTTCTGCAGGTGAATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR CCA 72 bp | TCCTGCCTGGATCCTGCTTCATCTTGCCTCCCTGGCTaGACTGATGAGCTGTTGGTTTTGTGCAGCTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SCLDPASSCLPG*TDELLVLCSLL Trigger: AAGCAAGCTGCACAAAACCAACAGCTCATCAGTCCAGCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR GCA 72 bp | GGCTTAAAGATGGAGAAGTCAGCCAGAGAATGGTGGTaGAGGCCTTTAATCCCAGCACTTGGTAGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GLKMEKSAREWW*RPLIPALGRQR Trigger: CCTCTGCCTACCAAGTGCTGGGATTAAAGGCCTGCACCACCATTCTCTGGCTGACTTCTCCATCTTTAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR GCA 72 bp | AGGCTGGCCTTGAACTCAGATCTGCCTACCACTGAGTaGTGGCATTTAAGGTGTGCACCACTACACTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLALNSDLPTTE*WHLRCAPLHSA Trigger: AGCTGAGTGTAGTGGTGCACACCTTAAATGCCAGCACTCAGTGGTAGGCAGATCTGAGTTCAAGGCCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR CCA 72 bp | TCGGGCTTAAAGATGGAGAAGTCAGCCAGAGAATGGTaGTGCAGGCCTTTAATCCCAGCACTTGGTAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGLKMEKSAREW*CRPLIPALGRQ Trigger: CTGCCTACCAAGTGCTGGGATTAAAGGCCTGCACCACCATTCTCTGGCTGACTTCTCCATCTTTAAGCCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR TCA 72 bp | AACAGCCATACCAAAGCAGGGACAGTCACTGGTTACTaGGGGCCACCCTGTGCTCCTTGCAATAGCTTACTA | + |
|
Preference number: 3 (lower is better) Translates to: NSHTKAGTVTGY*GPPCAPCNSLL Trigger: TAGTAAGCTATTGCAAGGAGCACAGGGTGGCCCTCAGTAACCAGTGACTGTCCCTGCTTTGGTATGGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR CCA 72 bp | GCAGAGGCAGGCAGATTTCTGAGATTGAGGCCAGCCTaGACTACAGAGTTCCAGGACAACCAGTGCTATATA | + |
|
Preference number: 3 (lower is better) Translates to: AEAGRFLRLRPA*TTEFQDNQCYI Trigger: TATATAGCACTGGTTGTCCTGGAACTCTGTAGTCCAGGCTGGCCTCAATCTCAGAAATCTGCCTGCCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR-3UTR CAA 90 bp | GAATCCTTCAAGCTTCAGTCCTGCCTGGATCCTGCTTCATCTTGCCTCCCTGGCAAGGTACTAGGTTGGTaGGGAGCTAGTGTTAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: ESFKLQSCLDPASSCLPGKVLGW*GASVNF Trigger: GAAATTAACACTAGCTCCCAACCAACCTAGTACCTT...GCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTTGAAGGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR GCA 72 bp | TCTGCCCTGGGAACAGCTCTACTTCAACAGATTAGCTaGCAGTCAAGCCAGCCAGGAATCAGTGTGTATCAT | + |
|
Preference number: 3 (lower is better) Translates to: SALGTALLQQIS*QSSQPGISVYH Trigger: ATGATACACACTGATTCCTGGCTGGCTTGACTGGCAGCTAATCTGTTGAAGTAGAGCTGTTCCCAGGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR TCA 72 bp | TCCTGCCCTAACTGCATGCACTCTCTCACTGTCCTGTaGGGTGGTACTATACAAACTATGCCCTATAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SCPNCMHSLTVL*GGTIQTMPYKE Trigger: CTCCTTATAGGGCATAGTTTGTATAGTACCACCTCACAGGACAGTGAGAGAGTGCATGCAGTTAGGGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR GCA 72 bp | GGAAGGGCTCACCATGCTTGGCTTTTCTACATTAGGTaGTGGGGATTAAATTCAGCTCATGGTGACCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GRAHHAWLFYIR*WGLNSAHGDLE Trigger: TTCTAGGTCACCATGAGCTGAATTTAATCCCCAGCACCTAATGTAGAAAAGCCAAGCATGGTGAGCCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR CCA 72 bp | GGTGGTACTATACAAACTATGCCCTATAAGGAGGGGTaGCTATGTGTTTACATCTCTGGTGTATGTCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: GGTIQTMPYKEG*LCVYISGVCQG Trigger: GCCCTGACATACACCAGAGATGTAAACACATAGCCACCCCTCCTTATAGGGCATAGTTTGTATAGTACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR CCA 72 bp | CTAGGATTGTGTGGCCTACAAATGAGTCCAGGAAGATaGAGCCCTTTAGGATCCATCAAGCCCCAAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGLCGLQMSPGR*SPLGSIKPQMK Trigger: TTTCATTTGGGGCTTGATGGATCCTAAAGGGCTCCATCTTCCTGGACTCATTTGTAGGCCACACAATCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR GCA 72 bp | CTCTCACTGTCCTGTGAGGTGGTACTATACAAACTATaGCCTATAAGGAGGGGTGGCTATGTGTTTACATCT | + |
|
Preference number: 3 (lower is better) Translates to: LSLSCEVVLYKL*PIRRGGYVFTS Trigger: AGATGTAAACACATAGCCACCCCTCCTTATAGGGCATAGTTTGTATAGTACCACCTCACAGGACAGTGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR GCA 72 bp | AGCCCTTTAGGATCCATCAAGCCCCAAATGAAAGCTTaGTTTTATTGTGTCACCTTCCATCACAGTAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SPLGSIKPQMKA*FYCVTFHHSSC Trigger: GCAGCTACTGTGATGGAAGGTGACACAATAAAAGCAAGCTTTCATTTGGGGCTTGATGGATCCTAAAGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR CCA 72 bp | CTCCATCACAGTGAACATGATCACTCAGTCATCTCTTaGCCCTTTGTAATCCTGTGTATTCGTACGGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LHHSEHDHSVIS*PFVILCIRTGN Trigger: ATTCCCCGTACGAATACACAGGATTACAAAGGGCCAAGAGATGACTGAGTGATCATGTTCACTGTGATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR CCA 72 bp | ACATTAACATCTAACAACCACTCAATGGCTTTGTACTaGCCAGCTTTGGGGACCAGTTTATGCCCAGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: TLTSNNHSMALY*PALGTSLCPGC Trigger: ACATCCTGGGCATAAACTGGTCCCCAAAGCTGGCCAGTACAAAGCCATTGAGTGGTTGTTAGATGTTAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR TCA 72 bp | CACCTGCAGACATCAGCCCATCTCTTACTTAGTTGTTaGAACGGATTTCACATTTACCCTGTTACCGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HLQTSAHLLLSC*NGFHIYPVTEE Trigger: TTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAACTAAGTAAGAGATGGGCTGATGTCTGCAGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | CCTCATTTCTGCTGCAGGGGAGGCTTCCTGGTCACTCGTGTCCCATTTCTGCTGGAGGGTAGGCCACTGTaGGGACTGGGGGAGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: PHFCCRGGFLVTRVPFLLEGRPL*GLGESR Trigger: CCGGCTCTCCCCCAGTCCTCACAGTGGCCTACCCTC...CAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGGCTGAGGCCTGTCACTaGACTCTCATGGGCCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGAEACH*TLMGPN Trigger: GTTCGGGCCCATGAGAGTGCAGTGACAGGCCTCAGC...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTGAATGGCTGGGATGCTaGTGGCGGAGGGAGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCHHWGRCWTPTLSTLQGEWLGC*WRREAW Trigger: CCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTC...ACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGCAAAGGCCACTCCAGTaGTCAGGCCACTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGQRPLQ*SGHCAL Trigger: CAGAGCACAGTGGCCTGACCACTGGAGTGGCCTTTG...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCGAATGGCTGGGATGCTaGTGGCGGAGGGAGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPVSEELKQSRHGTAAEWLGC*WRREAW Trigger: CCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTC...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGCACAACACTGGGCTGTaGGCTTGGCACAGCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLHNTGL*AWHSLR Trigger: CCTCAGGCTGTGCCAAGCTCACAGCCCAGTGTTGTG...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACCACAACACTGGGCTGTaGGCTTGGCACAGCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLAPPPCLRRAETEQAWNHNTGL*AWHSLR Trigger: CCTCAGGCTGTGCCAAGCTCACAGCCCAGTGTTGTG...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | AGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTCCTGCCGGTACTTGCTaGGCTCTTCAGGTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SCHHWGRCWTPTLSTLQGPAGTC*ALQVSP Trigger: TGGTGAAACCTGAAGAGCTCAGCAAGTACCGGCAGG...ACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGGTCCCAGAGCTTGACTaGGGAATCATCAGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGVPELD*GIISCC Trigger: ACAGCAGCTGATGATTCCTCAGTCAAGCTCTGGGAC...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | AGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTACATGGGATGCCACCTaGCGGTACTTGCTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCHHWGRCWTPTLSTLQGTWDAT*RYLLSS Trigger: AGAGCTCAGCAAGTACCGGCAGGTGGCATCCCATGT...ACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGGCTGAGGCCTGTCACTaGACTCTCATGGGCCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLRRAETEQAWNSCHHWGAEACH*TLMGPN Trigger: GTTCGGGCCCATGAGAGTGCAGTGACAGGCCTCAGC...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGATCAGGGTGGAACTGTaGACAGGTAAGAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGIRVEL*TGKRAA Trigger: GGCTGCTCTCTTACCTGTGCACAGTTCCACCCTGAT...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGTGGCGGAGGGAGGCTTaGGTCGGATTGGGTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CLRRAETEQAWNSCHHWGWRREA*VGLGEQ Trigger: TTGCTCACCCAATCCGACCCAAGCCTCCCTCCGCCA...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCGGCTTTCAGAATGGCTaGGATGCTGGTGGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPVSEELKQSRHGTAAGFQNG*DAGGGG Trigger: CCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCC...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | GACGGCTTTCAGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTCCTGGTCACTGGCTTTCAGAATGGCTaGGATGCTGGTGGCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGFQAFPHFCCRGGFLVTGFQNG*DAGGGG Trigger: CCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCC...AGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGGCATGGGACAGCTCCTaGCGGGTTGTCTGCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLAWDSS*RVVCSC Trigger: GCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGC...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGAATGGCCAGGGAAGTTaGCCACATTGGTACGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGNGQGS*PHWYAP Trigger: AGGAGCGTACCAATGTGGCCAACTTCCCTGGCCATT...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGTCCTGGCGGGTTGTCTaGAGTTGCTGGCGAAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSEELKQSRHGTAATTGSWRVV*SCWRRV Trigger: CACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGA...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CCTCATTTCTGCTGCAGGGGAGGCTTCCTGGTCACTCGTGTCCCATTTCTGCTGTCCTGGCGGGTTGTCTaGAGTTGCTGGCGAAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PHFCCRGGFLVTRVPFLLSWRVV*SCWRRV Trigger: CACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGA...CAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTGTTGTCTGCAGTTGCTaGCGAAGAGTGAAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCHHWGRCWTPTLSTLQGVVCSC*RRVKLC Trigger: GCACAGCTTCACTCTTCGCCAGCAACTGCAGACAAC...ACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGCTGTGTAGACCCACATaGGATGCCACCTGCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLLCRPT*DATCRY Trigger: GTACCGGCAGGTGGCATCCCATGTGGGTCTACACAG...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCCTGTGTAGACCCACATaGGATGCCACCTGCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLPVSEELKQSRHGTAALCRPT*DATCRY Trigger: GTACCGGCAGGTGGCATCCCATGTGGGTCTACACAG...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGCGGGTTGTCTGCAGTTaGTGGCGAAGAGTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVSEELKQSRHGTAATTGRVVCS*WRRVKL Trigger: CAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCG...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGCGGGTTGTCTGCAGTTaGTGGCGAAGAGTGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLRVVCS*WRRVKL Trigger: CAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCG...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTTCAAGCTTCAGTCCTGCCTGGATCCTGCTTCATCTTGCCTCCCTGGCATCCATGGGCTCTCCTaGACCCACAACACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESFKLQSCLDPASSCLPGIHGLS*THNTGL Trigger: CAGCCCAGTGTTGTGGGTGCAGGAGAGCCCATGGAT...GCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTTGAAGGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGACATGGGATGCCACCTaGCGGTACTTGCTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSEELKQSRHGTAATTGTWDAT*RYLLSS Trigger: AGAGCTCAGCAAGTACCGGCAGGTGGCATCCCATGT...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTAGGCTTGGGTCGGATTaGGTGAGCAACTTTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCHHWGRCWTPTLSTLQGRLGSD*VSNFDV Trigger: GACATCAAAGTTGCTCACCCAATCCGACCCAAGCCT...ACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGCTCACCCAAATCCATaGGCTCTCCTGCACCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PVSEELKQSRHGTAATTGAHPNP*ALLHPQ Trigger: TTGTGGGTGCAGGAGAGCCCATGGATTTGGGTGAGC...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | GCCTCTGACAGACGGCTTTCAGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTGCTCACCCAAATCCATaGGCTCTCCTGCACCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: ASDRRLSGFPSFLLQGRLAHPNP*ALLHPQ Trigger: TTGTGGGTGCAGGAGAGCCCATGGATTTGGGTGAGC...AAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTCTGTCAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTCCCAGATCTTGATCTaGGAGTCCATGGTTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGSQILI*ESMVPV Trigger: AACAGGAACCATGGACTCCCAGATCAAGATCTGGGA...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCGTAATGGGGCCAGAATaGCCAGGGAAGTTGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPVSEELKQSRHGTAAVMGPE*PGKLAT Trigger: TGTGGCCAACTTCCCTGGCCATTCTGGCCCCATTAC...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGGTAATGGGGCCAGAATaGCCAGGGAAGTTGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLVMGPE*PGKLAT Trigger: TGTGGCCAACTTCCCTGGCCATTCTGGCCCCATTAC...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| 3UTR CAA 72 bp | AAGGATCCCCAAGGCACAGCTAATGGTTCCTTACCCTaGGACAGCAGCAGGACCTCCTGCTGCCCATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDPQGTANGSLP*DSSRTSCCPYL Trigger: GAGGTATGGGCAGCAGGAGGTCCTGCTGCTGTCCAAGGGTAAGGAACCATTAGCTGTGCCTTGGGGATCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGATGAGCTGCTCCTCTaGGAGAGGCTGGTTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSEELKQSRHGTAATTGDELLL*ERLVVD Trigger: ATCAACAACCAGCCTCTCTCAGAGGAGCAGCTCATC...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACGATGAGCTGCTCCTCTaGGAGAGGCTGGTTGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLAPPPCLRRAETEQAWNDELLL*ERLVVD Trigger: ATCAACAACCAGCCTCTCTCAGAGGAGCAGCTCATC...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCAATCTTGTTGGTGTCTaGGGGACACAGGTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLPVSEELKQSRHGTAANLVGV*GTQVQS Trigger: GCTCTGGACCTGTGTCCCTCAGACACCAACAAGATT...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | GCCTCTGACAGACGGCTTTCAGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTAATCTTGTTGGTGTCTaGGGGACACAGGTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASDRRLSGFPSFLLQGRLNLVGV*GTQVQS Trigger: GCTCTGGACCTGTGTCCCTCAGACACCAACAAGATT...AAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTCTGTCAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | GACGGCTTTCAGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTCCTGGTCACTGTCCCAGAGCTTGACTaGGGAATCATCAGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DGFQAFPHFCCRGGFLVTVPELD*GIISCC Trigger: ACAGCAGCTGATGATTCCTCAGTCAAGCTCTGGGAC...AGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCTTGATGTCGATGAGCTaGTCCTCTGAGAGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLPVSEELKQSRHGTAALMSMS*SSERGW Trigger: CCAGCCTCTCTCAGAGGAGCAGCTCATCGACATCAA...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | GCCTCTGACAGACGGCTTTCAGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTTTGATGTCGATGAGCTaGTCCTCTGAGAGAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASDRRLSGFPSFLLQGRLLMSMS*SSERGW Trigger: CCAGCCTCTCTCAGAGGAGCAGCTCATCGACATCAA...AAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTCTGTCAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACCGAAGAGTGAAGCTGTaGAGCATGACTGCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLAPPPCLRRAETEQAWNRRVKL*SMTASH Trigger: GTGGGATGCAGTCATGCTGCACAGCTTCACTCTTCG...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025642.14 |
||
| CDS-3UTR GCA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACATCAGGGTGGAACTGTaGACAGGTAAGAGAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLAPPPCLRRAETEQAWNIRVEL*TGKRAA Trigger: GGCTGCTCTCTTACCTGTGCACAGTTCCACCCTGAT...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR GCA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGCGAAGAGTGAAGCTGTaGAGCATGACTGCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLRRAETEQAWNSCHHWGRRVKL*SMTASW Trigger: CCAGGATGCAGTCATGCTGCACAGCTTCACTCTTCG...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | GAATCCTTCAAGCTTCAGTCCTGCCTGGATCCTGCTTCATCTTGCCTCCCTGGCTGTTGGTACAGAGCATaGGACAGCTCCTGGCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESFKLQSCLDPASSCLPGCWYRA*DSSWRV Trigger: AACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACA...GCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTTGAAGGATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGAAGTTGGCCACATTaGTACGCTCCTTCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVSEELKQSRHGTAATTGGSWPH*YAPSSP Trigger: GGGACTTGAAGGAGCGTACCAATGTGGCCAACTTCC...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAATGGCCAGGGAAGTTaGCCACATTGGTACGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLAPPPCLRRAETEQAWNNGQGS*PHWYAP Trigger: AGGAGCGTACCAATGTGGCCAACTTCCCTGGCCATT...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCGCGATGAACTTGGCATaGTGTCCAAAGGCCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPVSEELKQSRHGTAAAMNLA*CPKATP Trigger: TGGAGTGGCCTTTGGACACCATGCCAAGTTCATCGC...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACTATCTGCCCCACCAGTaGGAATCTTGTTGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLAPPPCLRRAETEQAWNYLPHQ*ESCWCL Trigger: CAGACACCAACAAGATTCTCACTGGTGGGGCAGATA...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | AGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTTCTTGGTATGGCCTTTaGGAGTGGCCAATATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCHHWGRCWTPTLSTLQGSWYGL*EWPIFA Trigger: AGCAAATATTGGCCACTCTCAAAGGCCATACCAAGA...ACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGAAACACCACACTGGTaGCCTTCTTGGTATGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVSEELKQSRHGTAATTGETPHW*PSWYGL Trigger: AAGGCCATACCAAGAAGGTCACCAGTGTGGTGTTTC...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGGAAACACCACACTGGTaGCCTTCTTGGTATGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLRRAETEQAWNSCHHWGETPHW*PSWYGL Trigger: AAGGCCATACCAAGAAGGTCACCAGTGTGGTGTTTC...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGTGCCAGTTGAAGCGATaGACTTGGCATGGTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CLRRAETEQAWNSCHHWGCQLKR*TWHGVQ Trigger: TTGGACACCATGCCAAGTTCATCGCTTCAACTGGCA...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGGCTTGGGTCGGATTaGGTGAGCAACTTTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLAPPPCLRRAETEQAWNRLGSD*VSNFDV Trigger: GACATCAAAGTTGCTCACCCAATCCGACCCAAGCCT...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | AGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGAGGTGCGTGACCTTCTTGGTATaGCCTTTGAGAGTGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRAETEQAWNSCHHWGRCVTFLV*PLRVAN Trigger: ATTGGCCACTCTCAAAGGCCATACCAAGAAGGTCAC...GCACCTCCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGATGAGCCCATCAGGGTaGAACTGTGCACAGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLRRAETEQAWNSCHHWGMSPSG*NCAQVR Trigger: TCTTACCTGTGCACAGTTCCACCCTGATGGGCTCAT...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCATGAGCCCATCAGGGTaGAACTGTGCACAGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPVSEELKQSRHGTAAMSPSG*NCAQVR Trigger: TCTTACCTGTGCACAGTTCCACCCTGATGGGCTCAT...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | AGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTACAGTAGCCTTGTCTTaGAGCTTCTGGATAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCHHWGRCWTPTLSTLQGTVALS*SFWIIS Trigger: TGAGATTATCCAGAAGCTTCAAGACAAGGCTACTGT...ACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | GAATCCTTCAAGCTTCAGTCCTGCCTGGATCCTGCTTCATCTTGCCTCCCTGGCTATCTGCCCCACCAGTaGGAATCTTGTTGGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESFKLQSCLDPASSCLPGYLPHQ*ESCWCL Trigger: CAGACACCAACAAGATTCTCACTGGTGGGGCAGATA...GCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTTGAAGGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | CTACCTTTCCGGCTTGTAAGAGAGGCCAAGTCAGGGAGCAAGCACAGCACAAGTCCTGTCCATGCCAGTTaGAGCGATGAACTTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPFRLVREAKSGSKHSTSPVHAS*SDELGM Trigger: CATGCCAAGTTCATCGCTTCAACTGGCATGGACAGG...ACTTGTGCTGTGCTTGCTCCCTGACTTGGCCTCTCTTACAAGCCGGAAAGGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGTCCTCTGAGAGAGGCTaGTTGTTGATAGGATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLSSERG*LLIGSV Trigger: CACAGATCCTATCAACAACCAGCCTCTCTCAGAGGA...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCGTGACCTTCTTGGTATaGCCTTTGAGAGTGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPVSEELKQSRHGTAAVTFLV*PLRVAN Trigger: ATTGGCCACTCTCAAAGGCCATACCAAGAAGGTCAC...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACTCCCAGATCTTGATCTaGGAGTCCATGGTTCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLAPPPCLRRAETEQAWNSQILI*ESMVPV Trigger: AACAGGAACCATGGACTCCCAGATCAAGATCTGGGA...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| 3UTR CAA 72 bp | AGGACAGACCAGAGCACCAATGTAGGCGGTGAGGAATaGCCTGTCAGGTGCTGGTGTGGACTAGAGAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: RTDQSTNVGGEE*PVRCWCGLERI Trigger: AATTCTCTCTAGTCCACACCAGCACCTGACAGGCAATTCCTCACCGCCTACATTGGTGCTCTGGTCTGTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGCAATGTACTTCTCAATaGGTCGCCGCTCATACACAT | + |
|
Preference number: 4 (lower is better) Translates to: CLRRAETEQAWNSCHHWGQCTSQ*VAAHTH Trigger: ATGTGTATGAGCGGCGACTCATTGAGAAGTACATTG...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGTCTTGGTATGGCCTTTaGGAGTGGCCAATATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLSWYGL*EWPIFA Trigger: AGCAAATATTGGCCACTCTCAAAGGCCATACCAAGA...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | CCTCATTTCTGCTGCAGGGGAGGCTTCCTGGTCACTCGTGTCCCATTTCTGCTGCCAGCTGCAATGTCTTaGAGTTCTTCAACTTGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: PHFCCRGGFLVTRVPFLLPAAMS*SSSTCV Trigger: TACGCAAGTTGAAGAACTTCAAGACATTGCAGCTGG...CAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGAGAGTGGCCAATATTTaGTCAGTACTCTTATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGRVANI*SVLLSK Trigger: CTTTGATAAGAGTACTGAGCAAATATTGGCCACTCT...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACACAGTAGCCTTGTCTTaGAGCTTCTGGATAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PLAPPPCLRRAETEQAWNTVALS*SFWIIS Trigger: TGAGATTATCCAGAAGCTTCAAGACAAGGCTACTGT...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGCTGTGCTCTGTAAAGTaGAGAATCTCTGTCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVSEELKQSRHGTAATTGLCSVK*RISVHC Trigger: ACAATGGACAGAGATTCTTCACTTTACAGAGCACAG...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | GACGGCTTTCAGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTCCTGGTCACTCTGTGCTCTGTAAAGTaGAGAATCTCTGTCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: DGFQAFPHFCCRGGFLVTLCSVK*RISVHC Trigger: ACAATGGACAGAGATTCTTCACTTTACAGAGCACAG...AGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | GATAGCAATGTTCTATGTGCCCTGGCTCAGACCATCATCCAGACCAAAATGAAATCAGAATGGCTGGGATaGTGGTGGCGGAGGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSNVLCALAQTIIQTKMKSEWLG*WWRREA Trigger: AGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGA...TTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | TTTTTAATGAAACTAGATCGCTGCTTACAAAACCCTGCAAGAGTCCTCCTGCCCGAGCTTGGCACAGCCTaGGGTACAATAAGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLMKLDRCLQNPARVLLPELGTA*GTISPA Trigger: GGCTGGGCTTATTGTACCTCAGGCTGTGCCAAGCTC...GGGCAGGAGGACTCTTGCAGGGTTTTGTAAGCAGCGATCTAGTTTCATTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | GATAGCAATGTTCTATGTGCCCTGGCTCAGACCATCATCCAGACCAAAATGAAAATCCATGGGCTCTCCTaGACCCACAACACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSNVLCALAQTIIQTKMKIHGLS*THNTGL Trigger: CAGCCCAGTGTTGTGGGTGCAGGAGAGCCCATGGAT...TTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGTCTCTGTCCATTGTTTaGAGATGTAGATCTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PVSEELKQSRHGTAATTGSLSIV*RCRSGH Trigger: ATGTCCAGATCTACATCTGCAAACAATGGACAGAGA...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR GCA 90 bp | TTTTTAATGAAACTAGATCGCTGCTTACAAAACCCTGCAAGAGTCCTCCTGCCCGCTGTGCAGCATGACTaGATCCTGGGAGAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLMKLDRCLQNPARVLLPAVQHD*ILGEGR Trigger: CCTACCCTCTCCCAGGATGCAGTCATGCTGCACAGC...GGGCAGGAGGACTCTTGCAGGGTTTTGTAAGCAGCGATCTAGTTTCATTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCAACAACATTTTTATCTaGCCCACCAGTGAGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPVSEELKQSRHGTAANNIFI*PTSENL Trigger: AAGATTCTCACTGGTGGGGCAGATAAAAATGTTGTT...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR GCA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGAACAACATTTTTATCTaGCCCACCAGTGAGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLRRAETEQAWNSCHHWGNNIFI*PTSENL Trigger: AAGATTCTCACTGGTGGGGCAGATAAAAATGTTGTT...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | GATAGCAATGTTCTATGTGCCCTGGCTCAGACCATCATCCAGACCAAAATGAAATGTTGGTACAGAGCATaGGACAGCTCCTGGCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DSNVLCALAQTIIQTKMKCWYRA*DSSWRV Trigger: AACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACA...TTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | TTTTTAATGAAACTAGATCGCTGCTTACAAAACCCTGCAAGAGTCCTCCTGCCCCCTGTCCATGCCAGTTaGAGCGATGAACTTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FLMKLDRCLQNPARVLLPPVHAS*SDELGM Trigger: CATGCCAAGTTCATCGCTTCAACTGGCATGGACAGG...GGGCAGGAGGACTCTTGCAGGGTTTTGTAAGCAGCGATCTAGTTTCATTAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR GCA 90 bp | CTACCTTTCCGGCTTGTAAGAGAGGCCAAGTCAGGGAGCAAGCACAGCACAAGTATCTGTGCCATTCTCTaGAATGTACTTCTCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPFRLVREAKSGSKHSTSICAIL*NVLLNE Trigger: CTCATTGAGAAGTACATTGCAGAGAATGGCACAGAT...ACTTGTGCTGTGCTTGCTCCCTGACTTGGCCTCTCTTACAAGCCGGAAAGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTTCAAGCTTCAGTCCTGCCTGGATCCTGCTTCATCTTGCCTCCCTGGCAGAGTGGCCAATATTTaGTCAGTACTCTTATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESFKLQSCLDPASSCLPGRVANI*SVLLSK Trigger: CTTTGATAAGAGTACTGAGCAAATATTGGCCACTCT...GCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTTGAAGGATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR GCA 90 bp | CTACCTTTCCGGCTTGTAAGAGAGGCCAAGTCAGGGAGCAAGCACAGCACAAGTTCTCTGTCCATTGTTTaGAGATGTAGATCTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LPFRLVREAKSGSKHSTSSLSIV*RCRSGH Trigger: ATGTCCAGATCTACATCTGCAAACAATGGACAGAGA...ACTTGTGCTGTGCTTGCTCCCTGACTTGGCCTCTCTTACAAGCCGGAAAGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | GATAGCAATGTTCTATGTGCCCTGGCTCAGACCATCATCCAGACCAAAATGAAAGTTGTCTGCAGTTGCTaGCGAAGAGTGAAGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSNVLCALAQTIIQTKMKVVCSC*RRVKLC Trigger: GCACAGCTTCACTCTTCGCCAGCAACTGCAGACAAC...TTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | GATAGCAATGTTCTATGTGCCCTGGCTCAGACCATCATCCAGACCAAAATGAAAGGAAGTTGGCCACATTaGTACGCTCCTTCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSNVLCALAQTIIQTKMKGSWPH*YAPSSP Trigger: GGGACTTGAAGGAGCGTACCAATGTGGCCAACTTCC...TTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | GATAGCAATGTTCTATGTGCCCTGGCTCAGACCATCATCCAGACCAAAATGAAATCAAGTCCCAGATCTTaGTCTGGGAGTCCATGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSNVLCALAQTIIQTKMKSSPRS*SGSPWF Trigger: GAACCATGGACTCCCAGATCAAGATCTGGGACTTGA...TTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR TCA 90 bp | GATAGCAATGTTCTATGTGCCCTGGCTCAGACCATCATCCAGACCAAAATGAAAGTAAGTCCCAGAGCTTaGCTGAGGAATCATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSNVLCALAQTIIQTKMKVSPRA*LRNHQL Trigger: CAGCTGATGATTCCTCAGTCAAGCTCTGGGACTTAC...TTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | TTTTTAATGAAACTAGATCGCTGCTTACAAAACCCTGCAAGAGTCCTCCTGCCCAATAAGCCCAGCCTGTaGTTTCAGAGTAGCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLMKLDRCLQNPARVLLPNKPSL*FQSSQS Trigger: GCTCTGGCTACTCTGAAACCACAGGCTGGGCTTATT...GGGCAGGAGGACTCTTGCAGGGTTTTGTAAGCAGCGATCTAGTTTCATTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | GATAGCAATGTTCTATGTGCCCTGGCTCAGACCATCATCCAGACCAAAATGAAATCCTCTGAGAGAGGCTaGTTGTTGATAGGATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSNVLCALAQTIIQTKMKSSERG*LLIGSV Trigger: CACAGATCCTATCAACAACCAGCCTCTCTCAGAGGA...TTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | TTTTTAATGAAACTAGATCGCTGCTTACAAAACCCTGCAAGAGTCCTCCTGCCCAATCATCAGCTGCTGTaGCCAGGTAGTACCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLMKLDRCLQNPARVLLPNHQLL*PGSTHS Trigger: AGAATGGGTACTACCTGGCCACAGCAGCTGATGATT...GGGCAGGAGGACTCTTGCAGGGTTTTGTAAGCAGCGATCTAGTTTCATTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | GATAGCAATGTTCTATGTGCCCTGGCTCAGACCATCATCCAGACCAAAATGAAAAATCATCAGCTGCTGTaGCCAGGTAGTACCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSNVLCALAQTIIQTKMKNHQLL*PGSTHS Trigger: AGAATGGGTACTACCTGGCCACAGCAGCTGATGATT...TTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CCA 90 bp | TTGTTGAAACGGATTTCACATTTACCCTGTTACCGAAGAACTGTAAGACACAATCAAAGGCCACTCCAGTaGTCAGGCCACTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKRISHLPCYRRTVRHNQRPLQ*SGHCAL Trigger: CAGAGCACAGTGGCCTGACCACTGGAGTGGCCTTTG...ATTGTGTCTTACAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | GTTGTTGAAACGGATTTCACATTTACCCTGTTACCGAAGAACTGTAAGACACAAAGCATGACTGCATCCTaGGAGAGGGTAGGCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VVETDFTFTLLPKNCKTQSMTAS*ERVGHC Trigger: ACAGTGGCCTACCCTCTCCCAGGATGCAGTCATGCT...TTGTGTCTTACAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| 3UTR CAA 72 bp | AACTGCACATTAACATCTAACAACCACTCAATGGCTTaGTACTGGCCAGCTTTGGGGACCAGTTTATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NCTLTSNNHSMA*YWPALGTSLCP Trigger: TGGGCATAAACTGGTCCCCAAAGCTGGCCAGTACAAAGCCATTGAGTGGTTGTTAGATGTTAATGTGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | TTGTTGAAACGGATTTCACATTTACCCTGTTACCGAAGAACTGTAAGACACAATCCTGCCGGTACTTGCTaGGCTCTTCAGGTTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKRISHLPCYRRTVRHNPAGTC*ALQVSP Trigger: TGGTGAAACCTGAAGAGCTCAGCAAGTACCGGCAGG...ATTGTGTCTTACAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | TTTTTAATGAAACTAGATCGCTGCTTACAAAACCCTGCAAGAGTCCTCCTGCCCCCAGCTGCAATGTCTTaGAGTTCTTCAACTTGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLMKLDRCLQNPARVLLPPAAMS*SSSTCV Trigger: TACGCAAGTTGAAGAACTTCAAGACATTGCAGCTGG...GGGCAGGAGGACTCTTGCAGGGTTTTGTAAGCAGCGATCTAGTTTCATTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CCA 90 bp | GTTGTTGAAACGGATTTCACATTTACCCTGTTACCGAAGAACTGTAAGACACAAGCGATGAACTTGGCATaGTGTCCAAAGGCCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VVETDFTFTLLPKNCKTQAMNLA*CPKATP Trigger: TGGAGTGGCCTTTGGACACCATGCCAAGTTCATCGC...TTGTGTCTTACAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| 3UTR CAA 72 bp | ATGAGCTGTTGGTTTTGTGCAGCTTGCTTTTTGCTTTaGCAAGACAGGACTCTCTATGTAGTCCTAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSCWFCAACFLL*QDRTLYVVLVV Trigger: GACAACTAGGACTACATAGAGAGTCCTGTCTTGCAAAAGCAAAAAGCAAGCTGCACAAAACCAACAGCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS-3UTR GCA 90 bp | GATAGCAATGTTCTATGTGCCCTGGCTCAGACCATCATCCAGACCAAAATGAAAATCTGTGCCATTCTCTaGAATGTACTTCTCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSNVLCALAQTIIQTKMKICAIL*NVLLNE Trigger: CTCATTGAGAAGTACATTGCAGAGAATGGCACAGAT...TTTCATTTTGGTCTGGATGATGGTCTGAGCCAGGGCACATAGAACATTGCTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR TCA 90 bp | GTTGTTGAAACGGATTTCACATTTACCCTGTTACCGAAGAACTGTAAGACACAACAATGTACTTCTCAATaGGTCGCCGCTCATACACAT | + |
|
Preference number: 4 (lower is better) Translates to: VVETDFTFTLLPKNCKTQQCTSQ*VAAHTH Trigger: ATGTGTATGAGCGGCGACTCATTGAGAAGTACATTG...TTGTGTCTTACAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS GCA 90 bp | GAGGACTGGGGGAGAGCCGGAGAATTCGGCCAACCCCACTCATCCTaGAAGGCTTTCAGAATGGCTGGGATGCTGGTGGCGGAGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EDWGRAGEFGQPHSS*KAFRMAGMLVAEGG Trigger: GCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGGGTTGGCCGAATTCTCCGGCTCTCCCCCAGTCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS TCA 90 bp | GAAGCTGTGCAGCATGACTGCATCCTGGGAGAGGGTAGGCCACTGTaGGGACTGGGGGAGAGCCGGAGAATTCGGCCAACCCCACTCATC | + |
|
Preference number: 5 (lower is better) Translates to: EAVQHDCILGEGRPL*GLGESRRIRPTPLI Trigger: GATGAGTGGGGTTGGCCGAATTCTCCGGCTCTCCCCCAGTCCTCACAGTGGCCTACCCTCTCCCAGGATGCAGTCATGCTGCACAGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS CCA 90 bp | AGCCGGGCAATGACTCGGCAGGCAGCATCGTGTTGGTACAGAGCATaGGACAGCTCCTGGCGGGTTGTCTGCAGTTGCTGGCGAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SRAMTRQAASCWYRA*DSSWRVVCSCWRRV Trigger: CACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACACGATGCTGCCTGCCGAGTCATTGCCCGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 90 bp | CCGGAGAATTCGGCCAACCCCACTCATCCTGCAAGGCTTTCAGAATaGCTGGGATGCTGGTGGCGGAGGGAGGCTTGGGTCGGATTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: PENSANPTHPARLSE*LGCWWRREAWVGLG Trigger: ACCCAATCCGACCCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGGGTTGGCCGAATTCTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS CCA 90 bp | TGCAGCATGACTGCATCCTGGGAGAGGGTAGGCCACTGTGAGGACTaGGGGAGAGCCGGAGAATTCGGCCAACCCCACTCATCCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSMTASWERVGHCED*GRAGEFGQPHSSCK Trigger: CTTGCAGGATGAGTGGGGTTGGCCGAATTCTCCGGCTCTCCCCCAGTCCTCACAGTGGCCTACCCTCTCCCAGGATGCAGTCATGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS-3UTR CAA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGGCGGGTTGTCTGCAGTaGCTGGCGAAGAGTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGAGCLQ*LAKSEA Trigger: AGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGC...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CAA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGCACTGGGCTGTGAGCTaGGCACAGCCTGAGGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGHWAVS*AQPEVQ Trigger: TTGTACCTCAGGCTGTGCCAAGCTCACAGCCCAGTG...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS GCA 90 bp | TCGGCCAACCCCACTCATCCTGCAAGGCTTTCAGAATGGCTGGGATaGTGGTGGCGGAGGGAGGCTTGGGTCGGATTGGGTGAGCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: SANPTHPARLSEWLG*WWRREAWVGLGEQL Trigger: AAGTTGCTCACCCAATCCGACCCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGGGTTGGCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS GCA 90 bp | AGCTCCTGGCGGGTTGTCTGCAGTTGCTGGCGAAGAGTGAAGCTGTaGAGCATGACTGCATCCTGGGAGAGGGTAGGCCACTGTGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSWRVVCSCWRRVKL*SMTASWERVGHCED Trigger: GTCCTCACAGTGGCCTACCCTCTCCCAGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS CCA 90 bp | CAGCATGACTGCATCCCACTCATCCTGCAAGGCTTTCAGAATGGCTaGGATGCTGGTGGCGGAGGGAGGCTTGGGTCGGATTGGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QHDCIPLILQGFQNG*DAGGGGRLGSDWVS Trigger: GCTCACCCAATCCGACCCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGGATGCAGTCATGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025642.14 |
||
| CDS CCA 90 bp | ACTCGGCAGGCAGCATCGTGTTGGTACAGAGCATGGGACAGCTCCTaGCGGGTTGTCTGCAGTTGCTGGCGAAGAGTGAAGCTGTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRQAASCWYRAWDSS*RVVCSCWRRVKLCS Trigger: GCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACACGATGCTGCCTGCCGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS CCA 90 bp | ACCTCTTTGGTGAGCCGGGCAATGACTCGGCAGGCAGCATCGTGTTaGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTCTGCAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSLVSRAMTRQAASC*YRAWDSSWRVVCSC Trigger: GCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACACGATGCTGCCTGCCGAGTCATTGCCCGGCTCACCAAAGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS CCA 90 bp | AGAATTCGGCCAACCCCACTCATCCTGCAAGGCTTTCAGAATGGCTaGGATGCTGGTGGCGGAGGGAGGCTTGGGTCGGATTGGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RIRPTPLILQGFQNG*DAGGGGRLGSDWVS Trigger: GCTCACCCAATCCGACCCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGGGTTGGCCGAATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS CCA 90 bp | TGCAGTTGCTGGCGAAGAGTGAAGCTGTGCAGCATGACTGCATCCTaGGAGAGGGTAGGCCACTGTGAGGACTGGGGGAGAGCCGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: CSCWRRVKLCSMTAS*ERVGHCEDWGRAGE Trigger: TTCTCCGGCTCTCCCCCAGTCCTCACAGTGGCCTACCCTCTCCCAGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CTGCTGCAGGGGAGGCTTCCTGGTCACTCGTGTCCCATTTCTGCTGTCCCACACGCGGGTTGTCTGCAGTaGCTGGCGAAGAGTGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLQGRLPGHSCPISAVPHAGCLQ*LAKSEA Trigger: AGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGC...GTGTGGGACAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGGGGAAGTTGGCCACATaGGTACGCTCCTTCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGGKLAT*VRSFKS Trigger: GGACTTGAAGGAGCGTACCAATGTGGCCAACTTCCC...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS CCA 90 bp | TGGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTCTGCAGTTGCTaGCGAAGAGTGAAGCTGTGCAGCATGACTGCATCCTGGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WYRAWDSSWRVVCSC*RRVKLCSMTASWER Trigger: CCTCTCCCAGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGCCACCAGTGAGAATCTaGTTGGTGTCTGAGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGPPVRI*LVSEGH Trigger: GTGTCCCTCAGACACCAACAAGATTCTCACTGGTGG...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGAGGTGCGAATGGCCAGGGAAGTaGGCCACATTGGTACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRAETEQAWNSCHHWGRCEWPGK*ATLVRS Trigger: GGAGCGTACCAATGTGGCCAACTTCCCTGGCCATTC...GCACCTCCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGGTTGAAGCGATGAACTaGGCATGGTGTCCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGVEAMN*AWCPKA Trigger: GGCCTTTGGACACCATGCCAAGTTCATCGCTTCAAC...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS TCA 90 bp | GGCTCTCCTGCACCCACAACACTGGGCTGTGAGCTTGGCACAGCCTaGGGTACAATAAGCCCAGCCTGTGGTTTCAGAGTAGCCAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSPAPTTLGCELGTA*GTISPACGFRVARA Trigger: AGCTCTGGCTACTCTGAAACCACAGGCTGGGCTTATTGTACCTCAGGCTGTGCCAAGCTCACAGCCCAGTGTTGTGGGTGCAGGAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS GCA 90 bp | GCATCGTGTTGGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTCTaGAGTTGCTGGCGAAGAGTGAAGCTGTGCAGCATGACTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ASCWYRAWDSSWRVV*SCWRRVKLCSMTAS Trigger: GGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACACGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS GCA 90 bp | TGTTGGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTCTGCAGTTaGTGGCGAAGAGTGAAGCTGTGCAGCATGACTGCATCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CWYRAWDSSWRVVCS*WRRVKLCSMTASWE Trigger: CTCCCAGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS CCA 90 bp | TGGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTCTGCAGTTGCTaGCGAAGAGTGAAGCTGTGCAGCATGACTGCATCCCACTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: WYRAWDSSWRVVCSC*RRVKLCSMTASHSS Trigger: GGATGAGTGGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025642.14 |
||
| CDS-3UTR CAA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGGCAGGCAGCATCGTGTaGGTACAGAGCATGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: CLRRAETEQAWNSCHHWGAGSIV*VQSMGQ Trigger: CTGTCCCATGCTCTGTACCAACACGATGCTGCCTGC...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGGCAGGCAGCATCGTGTaGGTACAGAGCATGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLAGSIV*VQSMGQ Trigger: CTGTCCCATGCTCTGTACCAACACGATGCTGCCTGC...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACCACTGGGCTGTGAGCTaGGCACAGCCTGAGGTACAA | + |
|
Preference number: 5 (lower is better) Translates to: PLAPPPCLRRAETEQAWNHWAVS*AQPEVQ Trigger: TTGTACCTCAGGCTGTGCCAAGCTCACAGCCCAGTG...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGGCCACCTGCCGGTACTaGCTGAGCTCTTCAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLRRAETEQAWNSCHHWGATCRY*LSSSGF Trigger: GAAACCTGAAGAGCTCAGCAAGTACCGGCAGGTGGC...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCGCCACCTGCCGGTACTaGCTGAGCTCTTCAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLPVSEELKQSRHGTAAATCRY*LSSSGF Trigger: GAAACCTGAAGAGCTCAGCAAGTACCGGCAGGTGGC...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CTGCTGCAGGGGAGGCTTCCTGGTCACTCGTGTCCCATTTCTGCTGTCCCACACCCACCAGTGAGAATCTaGTTGGTGTCTGAGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: LLQGRLPGHSCPISAVPHPPVRI*LVSEGH Trigger: GTGTCCCTCAGACACCAACAAGATTCTCACTGGTGG...GTGTGGGACAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGACAGACGGCTTTCAGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTGAATGGCCAGGGAAGTaGGCCACATTGGTACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASDRRLSGFPSFLLQGRLEWPGK*ATLVRS Trigger: GGAGCGTACCAATGTGGCCAACTTCCCTGGCCATTC...AAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTCTGTCAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS GCA 90 bp | TGTTGGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTCTGCAGTTaGTGGCGAAGAGTGAAGCTGTGCAGCATGACTGCATCCCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: CWYRAWDSSWRVVCS*WRRVKLCSMTASHS Trigger: TGAGTGGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025642.14 |
||
| CDS-3UTR CAA 90 bp | GACGGCTTTCAGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTCCTGGTCACTGGGAAGTTGGCCACATaGGTACGCTCCTTCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DGFQAFPHFCCRGGFLVTGKLAT*VRSFKS Trigger: GGACTTGAAGGAGCGTACCAATGTGGCCAACTTCCC...AGTGACCAGGAAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCTGCTCTGGCACTTCATaGGAGATCGAGCAGATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLPVSEELKQSRHGTAACSGTS*EIEQIR Trigger: CCTGATCTGCTCGATCTCCAATGAAGTGCCAGAGCA...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGCCAGTGAGAATCTTGTaGGTGTCTGAGGGACACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLPVRIL*VSEGHR Trigger: CCTGTGTCCCTCAGACACCAACAAGATTCTCACTGG...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | GCCTCTGACAGACGGCTTTCAGGCTTTCCCTCATTTCTGCTGCAGGGGAGGCTTCCAGTGAGAATCTTGTaGGTGTCTGAGGGACACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ASDRRLSGFPSFLLQGRLPVRIL*VSEGHR Trigger: CCTGTGTCCCTCAGACACCAACAAGATTCTCACTGG...AAGCCTCCCCTGCAGCAGAAATGAGGGAAAGCCTGAAAGCCGTCTGTCAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CAGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTTCTTGGTATGGCCTTaGAGAGTGGCCAATATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLPPLGEVLDSDSEHFTGFLVWP*RVANIC Trigger: GCAAATATTGGCCACTCTCAAAGGCCATACCAAGAA...CCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGGAGAGAGGCTGGTTGTaGATAGGATCTGTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: CLRRAETEQAWNSCHHWGERGWL*IGSVPF Trigger: GAATGGCACAGATCCTATCAACAACCAGCCTCTCTC...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CAA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGGAGAGAGGCTGGTTGTaGATAGGATCTGTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLERGWL*IGSVPF Trigger: GAATGGCACAGATCCTATCAACAACCAGCCTCTCTC...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGTCTGAGAGAGGCTGGTaGTTGATAGGATCTGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CLRRAETEQAWNSCHHWGSERGW*LIGSVP Trigger: TGGCACAGATCCTATCAACAACCAGCCTCTCTCAGA...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CAA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACACACTGGTGACCTTCTaGGTATGGCCTTTGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLAPPPCLRRAETEQAWNTLVTF*VWPLRV Trigger: CACTCTCAAAGGCCATACCAAGAAGGTCACCAGTGT...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CAA 90 bp | CTGCTGCAGGGGAGGCTTCCTGGTCACTCGTGTCCCATTTCTGCTGTCCCACACTCCAGCTGCAATGTCTaGAAGTTCTTCAACTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LLQGRLPGHSCPISAVPHSSCNV*KFFNLR Trigger: ACGCAAGTTGAAGAACTTCAAGACATTGCAGCTGGA...GTGTGGGACAGCAGAAATGGGACACGAGTGACCAGGAAGCCTCCCCTGCAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS-3UTR CAA 90 bp | GAATCCTTCAAGCTTCAGTCCTGCCTGGATCCTGCTTCATCTTGCCTCCCTGGCGTTGAAGCGATGAACTaGGCATGGTGTCCAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ESFKLQSCLDPASSCLPGVEAMN*AWCPKA Trigger: GGCCTTTGGACACCATGCCAAGTTCATCGCTTCAAC...GCCAGGGAGGCAAGATGAAGCAGGATCCAGGCAGGACTGAAGCTTGAAGGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS TCA 90 bp | ACTCTCATGGGCCCGAACAACCTGTACGCAGGAAGTGTTCGGGACTaGCCAAATCCTGATAGTAGCATCAGGGGACGCAGAAAACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLMGPNNLYAGSVRD*PNPDSSIRGRRKHQ Trigger: CTGGTGTTTTCTGCGTCCCCTGATGCTACTATCAGGATTTGGTCAGTCCCGAACACTTCCTGCGTACAGGTTGTTCGGGCCCATGAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CAA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGTTCAAGTCCCAGATCTaGATCTGGGAGTCCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVSEELKQSRHGTAATTGFKSQI*IWESMV Trigger: AACCATGGACTCCCAGATCAAGATCTGGGACTTGAA...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CAA 90 bp | CTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCTTCAAGTCCCAGATCTaGATCTGGGAGTCCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLPVSEELKQSRHGTAAFKSQI*IWESMV Trigger: AACCATGGACTCCCAGATCAAGATCTGGGACTTGAA...GGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 90 bp | AAGTTGGCCACATTGGTACGCTCCTTCAAGTCCCAGATCTTGATCTaGGAGTCCATGGTTCCTGTTCCAAAGATGAGCCCATCAGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KLATLVRSFKSQILI*ESMVPVPKMSPSGW Trigger: CCACCCTGATGGGCTCATCTTTGGAACAGGAACCATGGACTCCCAGATCAAGATCTGGGACTTGAAGGAGCGTACCAATGTGGCCAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CAA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACTTCTTGGTATGGCCTTaGAGAGTGGCCAATATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLAPPPCLRRAETEQAWNFLVWP*RVANIC Trigger: GCAAATATTGGCCACTCTCAAAGGCCATACCAAGAA...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS-3UTR CAA 90 bp | TGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGGGTCCAGCTGCAATGTCTaGAAGTTCTTCAACTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: CLRRAETEQAWNSCHHWGSSCNV*KFFNLR Trigger: ACGCAAGTTGAAGAACTTCAAGACATTGCAGCTGGA...CCCCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACAGCTGCCACCACTGGGTTCACCTCAAAGTTGTaGTCCAGCTGCAATGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PVSEELKQSRHGTAATTGFTSKL*SSCNVL Trigger: CAAGACATTGCAGCTGGACAACAACTTTGAGGTGAA...CCCAGTGGTGGCAGCTGTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | AGCTGCCACCACTGGGGGAGGTGCTGGACTCCGACTCTGAGCACTTTACAGGGTAAGAATCTCTGTCCATaGTTTGCAGATGTAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCHHWGRCWTPTLSTLQGKNLCP*FADVDL Trigger: CAGATCTACATCTGCAAACAATGGACAGAGATTCTT...ACCCTGTAAAGTGCTCAGAGTCGGAGTCCAGCACCTCCCCCAGTGGTGGCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS TCA 90 bp | CCATTCTCTGCAATGTACTTCTCAATGAGTCGCCGCTCATACACATaGTTAGAGACAGGGGACACGCACGGGTGCTCTGGCACTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: PFSAMYFSMSRRSYT*LETGDTHGCSGTSL Trigger: CAATGAAGTGCCAGAGCACCCGTGCGTGTCCCCTGTCTCTAATCATGTGTATGAGCGGCGACTCATTGAGAAGTACATTGCAGAGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS TCA 90 bp | GGGTCGGATTGGGTGAGCAACTTTGATGTCGATGAGCTGCTCCTCTaGGAGAGGCTGGTTGTTGATAGGATCTGTGCCATTCTCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSDWVSNFDVDELLL*ERLVVDRICAILCN Trigger: ATTGCAGAGAATGGCACAGATCCTATCAACAACCAGCCTCTCTCAGAGGAGCAGCTCATCGACATCAAAGTTGCTCACCCAATCCGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | CCCTTGGCTCCTCCTCCCTGTCTCAGAAGAGCTGAAACAGAGCAGGCATGGAACGAGAGTGGCCAATATTaGCTCAGTACTCTTATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLAPPPCLRRAETEQAWNESGQY*LSTLIK Trigger: TTTGATAAGAGTACTGAGCAAATATTGGCCACTCTC...GTTCCATGCCTGCTCTGTTTCAGCTCTTCTGAGACAGGGAGGAGGAGCCAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCCTAAAGTCCCACCCCCACCCCCACCCTCTAACTCTAACCCACTACTGAAGAATCTCTGTCCATaGTTTGCAGATGTAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPPKVPPPPPPSNSNPLLKNLCP*FADVDL Trigger: CAGATCTACATCTGCAAACAATGGACAGAGATTCTT...CAGTAGTGGGTTAGAGTTAGAGGGTGGGGGTGGGGGTGGGACTTTAGGAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | TTTTTAATGAAACTAGATCGCTGCTTACAAAACCCTGCAAGAGTCCTCCTGCCCTTCACCTCAAAGTTGTaGTCCAGCTGCAATGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLMKLDRCLQNPARVLLPFTSKL*SSCNVL Trigger: CAAGACATTGCAGCTGGACAACAACTTTGAGGTGAA...GGGCAGGAGGACTCTTGCAGGGTTTTGTAAGCAGCGATCTAGTTTCATTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | TTGTTGAAACGGATTTCACATTTACCCTGTTACCGAAGAACTGTAAGACACAATTGCTCTGGCACTTCATaGGAGATCGAGCAGATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLKRISHLPCYRRTVRHNCSGTS*EIEQIR Trigger: CCTGATCTGCTCGATCTCCAATGAAGTGCCAGAGCA...ATTGTGTCTTACAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | TTTTTAATGAAACTAGATCGCTGCTTACAAAACCCTGCAAGAGTCCTCCTGCCCGAGAGTGGCCAATATTaGCTCAGTACTCTTATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLMKLDRCLQNPARVLLPESGQY*LSTLIK Trigger: TTTGATAAGAGTACTGAGCAAATATTGGCCACTCTC...GGGCAGGAGGACTCTTGCAGGGTTTTGTAAGCAGCGATCTAGTTTCATTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS-3UTR CAA 90 bp | TTGTTGAAACGGATTTCACATTTACCCTGTTACCGAAGAACTGTAAGACACAATACACTGGTGACCTTCTaGGTATGGCCTTTGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLKRISHLPCYRRTVRHNTLVTF*VWPLRV Trigger: CACTCTCAAAGGCCATACCAAGAAGGTCACCAGTGT...ATTGTGTCTTACAGTTCTTCGGTAACAGGGTAAATGTGAAATCCGTTTCAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS CCA 72 bp | GTGAGCCGGGCAATGACTCGGCAGGCAGCATCGTGTTaGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VSRAMTRQAASC*YRAWDSSWRVV Trigger: GACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACACGATGCTGCCTGCCGAGTCATTGCCCGGCTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS CCA 72 bp | TCGGCCAACCCCACTCATCCTGCAAGGCTTTCAGAATaGCTGGGATGCTGGTGGCGGAGGGAGGCTTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SANPTHPARLSE*LGCWWRREAWV Trigger: GACCCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGGGTTGGCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS GCA 72 bp | CCCACTCATCCTGCAAGGCTTTCAGAATGGCTGGGATaGTGGTGGCGGAGGGAGGCTTGGGTCGGATTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PTHPARLSEWLG*WWRREAWVGLG Trigger: ACCCAATCCGACCCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
||
| CDS GCA 72 bp | GGGAGAGCCGGAGAATTCGGCCAACCCCACTCATCCTaGAAGGCTTTCAGAATGGCTGGGATGCTGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: GRAGEFGQPHSS*KAFRMAGMLVA Trigger: CGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGGGTTGGCCGAATTCTCCGGCTCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
||
| CDS CCA 72 bp | CCAACCCCACTCATCCTGCAAGGCTTTCAGAATGGCTaGGATGCTGGTGGCGGAGGGAGGCTTGGGTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: PTPLILQGFQNG*DAGGGGRLGSD Trigger: ATCCGACCCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGGGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS CAA 90 bp | GACCTCTTTGGTGAGCCGGGCAATGACTCGGCAGGCAGCATCGTGTaGGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTCTGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: DLFGEPGNDSAGSIV*VQSMGQLLAGCLQL Trigger: CAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACACGATGCTGCCTGCCGAGTCATTGCCCGGCTCACCAAAGAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS GCA 72 bp | CGGGTTGTCTGCAGTTGCTGGCGAAGAGTGAAGCTGTaGAGCATGACTGCATCCTGGGAGAGGGTAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RVVCSCWRRVKL*SMTASWERVGH Trigger: GTGGCCTACCCTCTCCCAGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS CCA 72 bp | CATCCTGCAAGGCTTTCAGAATGGCTGGGATGCTGGTaGCGGAGGGAGGCTTGGGTCGGATTGGGTGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: HPARLSEWLGCW*RREAWVGLGEQ Trigger: TTGCTCACCCAATCCGACCCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 72 bp | TGCATCCCACTCATCCTGCAAGGCTTTCAGAATGGCTaGGATGCTGGTGGCGGAGGGAGGCTTGGGTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: CIPLILQGFQNG*DAGGGGRLGSD Trigger: ATCCGACCCAAGCCTCCCTCCGCCACCAGCATCCCAGCCATTCTGAAAGCCTTGCAGGATGAGTGGGATGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025642.14 |
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| CDS CCA 72 bp | GCATGGGACAGCTCCTGGCGGGTTGTCTGCAGTTGCTaGCGAAGAGTGAAGCTGTGCAGCATGACTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: AWDSSWRVVCSC*RRVKLCSMTAS Trigger: GGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 72 bp | ATGACTCGGCAGGCAGCATCGTGTTGGTACAGAGCATaGGACAGCTCCTGGCGGGTTGTCTGCAGTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: MTRQAASCWYRA*DSSWRVVCSCW Trigger: CCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACACGATGCTGCCTGCCGAGTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 72 bp | TGGCGAAGAGTGAAGCTGTGCAGCATGACTGCATCCTaGGAGAGGGTAGGCCACTGTGAGGACTGGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: WRRVKLCSMTAS*ERVGHCEDWGR Trigger: TCTCCCCCAGTCCTCACAGTGGCCTACCCTCTCCCAGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS CAA 72 bp | AGAGTAGCCAGAGCTTCTCGAGCAGCAGTGACCTCTTaGGTGAGCCGGGCAATGACTCGGCAGGCAGCATCG | + |
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Preference number: 6 (lower is better) Translates to: RVARASRAAVTS*VSRAMTRQAAS Trigger: CGATGCTGCCTGCCGAGTCATTGCCCGGCTCACCAAAGAGGTCACTGCTGCTCGAGAAGCTCTGGCTACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CAA 90 bp | GTGTTGGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTCTGCAGTaGCTGGCGAAGAGTGAAGCTGTGCAGCATGACTGCATCCCACTC | + |
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Preference number: 6 (lower is better) Translates to: VLVQSMGQLLAGCLQ*LAKSEAVQHDCIPL Trigger: GAGTGGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025642.14 |
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| CDS CAA 90 bp | GTGTTGGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTCTGCAGTaGCTGGCGAAGAGTGAAGCTGTGCAGCATGACTGCATCCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: VLVQSMGQLLAGCLQ*LAKSEAVQHDCILG Trigger: TCCCAGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179297.3 |
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| CDS GCA 72 bp | AGAGCATGGGACAGCTCCTGGCGGGTTGTCTGCAGTTaGTGGCGAAGAGTGAAGCTGTGCAGCATGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: RAWDSSWRVVCS*WRRVKLCSMTA Trigger: TGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS GCA 72 bp | TGGTACAGAGCATGGGACAGCTCCTGGCGGGTTGTCTaGAGTTGCTGGCGAAGAGTGAAGCTGTGCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: WYRAWDSSWRVV*SCWRRVKLCSM Trigger: CATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 72 bp | GCAGCATCGTGTTGGTACAGAGCATGGGACAGCTCCTaGCGGGTTGTCTGCAGTTGCTGGCGAAGAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: AASCWYRAWDSS*RVVCSCWRRVK Trigger: CTTCACTCTTCGCCAGCAACTGCAGACAACCCGCCAGGAGCTGTCCCATGCTCTGTACCAACACGATGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CAA 90 bp | TGTGGTTTCAGAGTAGCCAGAGCTTCTCGAGCAGCAGTGACCTCTTaGGTGAGCCGGGCAATGACTCGGCAGGCAGCATCGTGTTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: CGFRVARASRAAVTS*VSRAMTRQAASCWY Trigger: GTACCAACACGATGCTGCCTGCCGAGTCATTGCCCGGCTCACCAAAGAGGTCACTGCTGCTCGAGAAGCTCTGGCTACTCTGAAACCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS GCA 72 bp | CGGGTTGTCTGCAGTTGCTGGCGAAGAGTGAAGCTGTaGAGCATGACTGCATCCCACTCATCCTGCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RVVCSCWRRVKL*SMTASHSSCKA Trigger: AGCCTTGCAGGATGAGTGGGATGCAGTCATGCTGCACAGCTTCACTCTTCGCCAGCAACTGCAGACAACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025642.14 |
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| CDS CCA 72 bp | CTCCTGTCCATGCCAGTTGAAGCGATGAACTTGGCATaGTGTCCAAAGGCCACTCCAGTGGTCAGGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: LLSMPVEAMNLA*CPKATPVVRPL Trigger: CAGTGGCCTGACCACTGGAGTGGCCTTTGGACACCATGCCAAGTTCATCGCTTCAACTGGCATGGACAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CAA 72 bp | GCGATGCTGGTAATGGGGCCAGAATGGCCAGGGAAGTaGGCCACATTGGTACGCTCCTTCAAGTCCCAGATC | + |
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Preference number: 6 (lower is better) Translates to: AMLVMGPEWPGK*ATLVRSFKSQI Trigger: GATCTGGGACTTGAAGGAGCGTACCAATGTGGCCAACTTCCCTGGCCATTCTGGCCCCATTACCAGCATCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS TCA 72 bp | GCACCCACAACACTGGGCTGTGAGCTTGGCACAGCCTaGGGTACAATAAGCCCAGCCTGTGGTTTCAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: APTTLGCELGTA*GTISPACGFRV Trigger: TACTCTGAAACCACAGGCTGGGCTTATTGTACCTCAGGCTGTGCCAAGCTCACAGCCCAGTGTTGTGGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS TCA 72 bp | GGCCCGAACAACCTGTACGCAGGAAGTGTTCGGGACTaGCCAAATCCTGATAGTAGCATCAGGGGACGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GPNNLYAGSVRD*PNPDSSIRGRR Trigger: TCTGCGTCCCCTGATGCTACTATCAGGATTTGGTCAGTCCCGAACACTTCCTGCGTACAGGTTGTTCGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS GCA 72 bp | ATGCTAGCACTGTGTAGACCCACATGGGATGCCACCTaGCGGTACTTGCTGAGCTCTTCAGGTTTCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: MLALCRPTWDAT*RYLLSSSGFTS Trigger: GCTGGTGAAACCTGAAGAGCTCAGCAAGTACCGGCAGGTGGCATCCCATGTGGGTCTACACAGTGCTAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 72 bp | GCTTGGCACAGCCTGAGGTACAATAAGCCCAGCCTGTaGTTTCAGAGTAGCCAGAGCTTCTCGAGCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: AWHSLRYNKPSL*FQSSQSFSSSS Trigger: ACTGCTGCTCGAGAAGCTCTGGCTACTCTGAAACCACAGGCTGGGCTTATTGTACCTCAGGCTGTGCCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS TCA 72 bp | GCAATGTACTTCTCAATGAGTCGCCGCTCATACACATaGTTAGAGACAGGGGACACGCACGGGTGCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: AMYFSMSRRSYT*LETGDTHGCSG Trigger: GCCAGAGCACCCGTGCGTGTCCCCTGTCTCTAATCATGTGTATGAGCGGCGACTCATTGAGAAGTACATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 72 bp | CACATGATTAGAGACAGGGGACACGCACGGGTGCTCTaGCACTTCATTGGAGATCGAGCAGATCAGGGACAT | + |
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Preference number: 6 (lower is better) Translates to: HMIRDRGHARVL*HFIGDRADQGH Trigger: ATGTCCCTGATCTGCTCGATCTCCAATGAAGTGCCAGAGCACCCGTGCGTGTCCCCTGTCTCTAATCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 72 bp | AGAATCCCAGGAATGCTAGCACTGTGTAGACCCACATaGGATGCCACCTGCCGGTACTTGCTGAGCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RIPGMLALCRPT*DATCRYLLSSS Trigger: TGAAGAGCTCAGCAAGTACCGGCAGGTGGCATCCCATGTGGGTCTACACAGTGCTAGCATTCCTGGGATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS TCA 72 bp | TTTATCTGCCCCACCAGTGAGAATCTTGTTGGTGTCTaGGGGACACAGGTCCAGAGCGAGAATCCCAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: FICPTSENLVGV*GTQVQSENPRN Trigger: ATTCCTGGGATTCTCGCTCTGGACCTGTGTCCCTCAGACACCAACAAGATTCTCACTGGTGGGGCAGATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 72 bp | ACATTGGTACGCTCCTTCAAGTCCCAGATCTTGATCTaGGAGTCCATGGTTCCTGTTCCAAAGATGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: TLVRSFKSQILI*ESMVPVPKMSP Trigger: TGGGCTCATCTTTGGAACAGGAACCATGGACTCCCAGATCAAGATCTGGGACTTGAAGGAGCGTACCAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS GCA 72 bp | GAGAGGCTGGTTGTTGATAGGATCTGTGCCATTCTCTaGAATGTACTTCTCAATGAGTCGCCGCTCATACAC | + |
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Preference number: 6 (lower is better) Translates to: ERLVVDRICAIL*NVLLNESPLIH Trigger: GTGTATGAGCGGCGACTCATTGAGAAGTACATTGCAGAGAATGGCACAGATCCTATCAACAACCAGCCTCTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CCA 72 bp | ACTTTGATGTCGATGAGCTGCTCCTCTGAGAGAGGCTaGTTGTTGATAGGATCTGTGCCATTCTCTGCAATG | + |
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Preference number: 6 (lower is better) Translates to: TLMSMSCSSERG*LLIGSVPFSAM Trigger: CATTGCAGAGAATGGCACAGATCCTATCAACAACCAGCCTCTCTCAGAGGAGCAGCTCATCGACATCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CAA 72 bp | ATGTCGATGAGCTGCTCCTCTGAGAGAGGCTGGTTGTaGATAGGATCTGTGCCATTCTCTGCAATGTACTTC | + |
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Preference number: 6 (lower is better) Translates to: MSMSCSSERGWL*IGSVPFSAMYF Trigger: GAAGTACATTGCAGAGAATGGCACAGATCCTATCAACAACCAGCCTCTCTCAGAGGAGCAGCTCATCGACAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CAA 90 bp | GCAACTTTGATGTCGATGAGCTGCTCCTCTGAGAGAGGCTGGTTGTaGATAGGATCTGTGCCATTCTCTGCAATGTACTTCTCAATGAGT | + |
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Preference number: 6 (lower is better) Translates to: ATLMSMSCSSERGWL*IGSVPFSAMYFSMS Trigger: ACTCATTGAGAAGTACATTGCAGAGAATGGCACAGATCCTATCAACAACCAGCCTCTCTCAGAGGAGCAGCTCATCGACATCAAAGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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| CDS CAA 90 bp | ACCTCAAAGTTGTTGTCCAGCTGCAATGTCTTGAAGTTCTTCAACTaGCGTAAGTCCCAGAGCTTGACTGAGGAATCATCAGCTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TSKLLSSCNVLKFFN*RKSQSLTEESSAAV Trigger: CACAGCAGCTGATGATTCCTCAGTCAAGCTCTGGGACTTACGCAAGTTGAAGAACTTCAAGACATTGCAGCTGGACAACAACTTTGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025642.14 ENSMUST00000179297.3 |
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