Pregenerated sensors for PRP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058295Ensembl transcript IDs: ENSMUST00000076061.4, ENSMUST00000178961.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CCAGTTATAATCCTTTGTGGCCATGGGAGAACTTTCTaGGGGAGCCATTGTCCTATTCATTTCTGTCACGGA | + |
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Preference number: 3 (lower is better) Translates to: PVIILCGHGRTF*GSHCPIHFCHG Trigger: TCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCATGGCCACAAAGGATTATAACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGCAGGTGTGGGCCGGGTaGTGGTGGGCCTTGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWQVWAG*WWALRG Trigger: CCCCCTCAAGGCCCACCACCACCCGGCCCACACCTG...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGAGGGGGTCTCGGCTGTaGGCCTCCTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWRGSRL*ASWWWW Trigger: CCACCACCACCAGGAGGCCCACAGCCGAGACCCCCT...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGCGGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWRLWAS*WWWALR Trigger: CCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCG...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGAGTGGGTCTCAGGTGTaGGCCGGGTGGTGGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWSGSQV*AGWWWA Trigger: GGCCCACCACCACCCGGCCCACACCTGAGACCCACT...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGGGGGTGGGCCTTGAGTaGGTCTCAGGTGTGGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWGVGLE*VSGVGR Trigger: CCGGCCCACACCTGAGACCCACTCAAGGCCCACCCC...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGGGGGTGGGCCTTGAGTaGGTCTCGGCTGTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWGVGLE*VSAVGL Trigger: CAGGCCCACAGCCGAGACCCACTCAAGGCCCACCCC...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGAGGGGGTCGCTGCTGTaGGCCTCCTGTTGGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWRGSLL*ASCWGW Trigger: CCACCCCCAACAGGAGGCCCACAGCAGCGACCCCCT...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGCGGCTGTGGGCCACCTaGTGGTGGTGGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWRLWAT*WWWALR Trigger: CCTCAAGGCCCACCACCACCAGGTGGCCCACAGCCG...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR TCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGGTTGGGGGTGGGCCTTaGGTGGGTCTCAGGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWVGGGP*VGLRCG Trigger: CCCACACCTGAGACCCACTCAAGGCCCACCCCCAAC...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWLWASW*WWALLA Trigger: AGCCAGCAAGGCCCACCACCACCAGGAGGCCCACAG...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTCGGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGRLWAS*WWWALL Trigger: CAGCAAGGCCCACCACCACCAGGAGGCCCACAGCCG...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFLWASW*WWALRG Trigger: CCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAG...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTGTGTGGGCCGGGTGGTaGTGGGCCTTGAGGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGVWAGW*WALRGS Trigger: AGACCCCCTCAAGGCCCACCACCACCCGGCCCACAC...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGCTGTGGGCCTCCTGTTaGGGGTGGGCCTTGAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWLWASC*GWALSG Trigger: CCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAG...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGCGGCTGTGGGCCTCCTaGTGGTGGTGGGCTTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWRLWAS*WWWALR Trigger: CCTCAAAGCCCACCACCACCAGGAGGCCCACAGCCG...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTCGGGTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGRVWAS*WWWALR Trigger: CCTCAAGGCCCACCACCACCAGGAGGCCCACACCCG...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGCCACCTGGTGGTGGTaGGCCTTGAGGGGGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFATWWW*ALRGSL Trigger: CAGCGACCCCCTCAAGGCCCACCACCACCAGGTGGC...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTTGGGCCACCTGGTGGTaGTGGGCCTTGAGGGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFWATWW*WALRGS Trigger: CGACCCCCTCAAGGCCCACCACCACCAGGTGGCCCA...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTGGGCCTGTTGGGGGTaGTGGGCCTTGAGGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWWACWG*WALRGS Trigger: AGACCCCCTCAAGGCCCACCACCCCCAACAGGCCCA...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTCGGCTGTGGGCCTGTTaGGGGTGGTGGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGRLWAC*GWWALR Trigger: CCTCAAGGCCCACCACCCCCAACAGGCCCACAGCCG...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGGCCTCCTGGTGGTGGTaGGCCTTGCTGGCTCCCATT | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWASWWW*ALLAPI Trigger: AATGGGAGCCAGCAAGGCCCACCACCACCAGGAGGC...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFWASWW*WALRGS Trigger: AGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCA...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTCTGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFLLWAS*WWWALR Trigger: CCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAG...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTAGGGGGTCTCTGCTGTaGGCCTCCTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGRGSLL*ASWWWW Trigger: CCACCACCACCAGGAGGCCCACAGCAGAGACCCCCT...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTACCTGCTGGTGGTGGTaGGCCTTGAGGGGGTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFTCWWW*ALRGSR Trigger: CCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGT...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTGGACCTGCTGGTGGTaGTGGGCCTTGAGGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWWTCWW*WALRGS Trigger: AGACCCCCTCAAGGCCCACCACCACCAGCAGGTCCA...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTCGGCTGTGGACCTGCTaGTGGTGGTGGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFRLWTC*WWWALR Trigger: CCTCAAGGCCCACCACCACCAGCAGGTCCACAGCCG...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTAGGGGGTCTCGGCTGTaGACCTGCTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGRGSRL*TCWWWW Trigger: CCACCACCACCAGCAGGTCCACAGCCGAGACCCCCT...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGAGGGTATCGCTGCTGTaGGCCTCCTGTTGGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWRVSLL*ASCWGW Trigger: CCACCCCCAACAGGAGGCCCACAGCAGCGATACCCT...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTAGTGGGTCTCGGGTGTaGGCCTCCTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFSGSRV*ASWWWW Trigger: CCACCACCACCAGGAGGCCCACACCCGAGACCCACT...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTAGTGGGTCTCGGCTGTaGGCCTGTTGGGGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGSGSRL*ACWGWW Trigger: CCACCACCCCCAACAGGCCCACAGCCGAGACCCACT...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTGGTGTGGGCCTTGAGTaGGTCTCGGCTGTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGGVGLE*VSAVGL Trigger: CAGGCCCACAGCCGAGACCCACTCAAGGCCCACACC...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR TCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTTCTTCACGGGGTTCCTaGGCAGAGCTCAGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGSSRGS*AELRAS Trigger: GCTGGCCCTGAGCTCTGCTCAGGAACCCCGTGAAGA...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR GCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTTCTCGGCTGTGGACCTaGTGGTGGTGGTGGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGSRLWT*WWWWAL Trigger: CAAGGCCCACCACCACCAGCAGGTCCACAGCCGAGA...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR GCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTGAGGTCCCTGGGGTCTaGCTTGTGGTGGGCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGEVPGV*LVVGLV Trigger: CACAAGGCCCACCACAAGGCAGACCCCAGGGACCTC...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGGGTGGTGGGCCTTGCTaGCTCCCATTAACAGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWGGGPC*LPLTGG Trigger: ACCGCCTGTTAATGGGAGCCAGCAAGGCCCACCACC...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTCTGTGGGCCTCCTGTTaGGTGTGGGCCTTGAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFLWASC*VWALSG Trigger: CCCACTCAAGGCCCACACCCAACAGGAGGCCCACAG...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGGGGTCTGCCTTGTGGTaGGCCTTGTGGGTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLFISVTEFWGSALW*ALWVSS Trigger: GCTGGAAACCCACAAGGCCCACCACAAGGCAGACCC...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTTGGGCCTCCTGGTGGTaGTGGGCTTTGAGGGTATCG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGWASWW*WALRVS Trigger: CGATACCCTCAAAGCCCACCACCACCAGGAGGCCCA...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTCTGTGGGCCTCCTGGTaGTGGTGGGCTTTGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGLWASW*WWALRV Trigger: TACCCTCAAAGCCCACCACCACCAGGAGGCCCACAG...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTCTGGGGTCTGCCTTGTaGTGGGCCTTGTGGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPLSYSFLSRNFGLGSAL*WALWVS Trigger: GGAAACCCACAAGGCCCACCACAAGGCAGACCCCAG...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTAGGAGGTGTTTGCTGTaGGCCTCCTGTTGGGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFRRCLL*ASCWVW Trigger: CCACACCCAACAGGAGGCCCACAGCAAACACCTCCT...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTTTGTGGTGGGCCTTGTaGGTTTCCAGCCAGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFLWWAL*VSSQRR Trigger: CCTCCTCTGGCTGGAAACCCACAAGGCCCACCACAA...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR TCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTTCTTGGTTGGGACCCTaGAGGAGGTGGCCTTTGATT | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPLSYSFLSRNFSWLGP*RRWPLI Trigger: AATCAAAGGCCACCTCCTTCAGGGTCCCAACCAAGA...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS GCA 90 bp | TGGGCCGGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGACCTaGTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WAGWWWALRGSRLWT*WWWWALRGSRLWAS Trigger: GGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGTCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCCGGCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TCCTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWWWWALRGSRLWAS*WWWALRGSRLWASW Trigger: CCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | CTGTGGGCCTCCTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTaGGCCTCCTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWASWWWWALRGSRL*ASWWWWALRGSRLW Trigger: CCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | GGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGACCTGCTGGTaGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWWWALRGSRLWTCW*WWALRGSRLWASWW Trigger: CCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGTCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | CGGCTGTGGGCCTGTTGGGGGTGGGCCTTGAGTGGGTCTCGGGTGTaGGCCTCCTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLWACWGWALSGSRV*ASWWWWALRGSRLW Trigger: CCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACACCCGAGACCCACTCAAGGCCCACCCCCAACAGGCCCACAGCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWALRGSLLWASWWW*ALRGSRLWASWWWW Trigger: CCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWALRGSLLWASWW*WALRGSRLWASWWW Trigger: CCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWALRGSLLWASW*WWALRGSRLWASWW Trigger: CCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWALRGSRLWASWW*WALRGSLLWASWWW Trigger: CCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWALRGSRLWASW*WWALRGSLLWASWW Trigger: CCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGCTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CWWWWALRGSRLWAS*WWWALRGSLLWASW Trigger: CCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | CTGTGGGCCACCTGGTGGTGGTGGGCCTTGAGGGGGTCGCTGCTGTaGGCCTCCTGTTGGGGGTGGGCCTTGAGTGGGTCTCGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWATWWWWALRGSLL*ASCWGWALSGSRLW Trigger: CCACAGCCGAGACCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGACCCCCTCAAGGCCCACCACCACCAGGTGGCCCACAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWALRGSLLWASWWW*ALRGSLLWASWWWW Trigger: CCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWALRGSLLWASWW*WALRGSLLWASWWW Trigger: CCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWALRGSLLWASW*WWALRGSLLWASWW Trigger: CCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS CCA 90 bp | GAGGGTATCGCTGCTGTGGGCCTCCTGTTGGGGGTGGGCCTTGAGTaGGTCTCAGGTGTGGGCCGGGTGGTGGTGGGCCTTGAGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EGIAAVGLLLGVGLE*VSGVGRVVVGLEGV Trigger: GACCCCCTCAAGGCCCACCACCACCCGGCCCACACCTGAGACCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGATACCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TCCTGTTGGGGGTGGGCCTTGAGTGGGTCTCGGCTGTGGGCCTGTTaGGGGTGGGCCTTGAGTGGGTCTCGGGTGTGGGCCTCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCWGWALSGSRLWAC*GWALSGSRVWASWW Trigger: CCACCAGGAGGCCCACACCCGAGACCCACTCAAGGCCCACCCCCAACAGGCCCACAGCCGAGACCCACTCAAGGCCCACCCCCAACAGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGGTGGGCTTTGAGGGTATCGCTGCTGTGGGCCTCCTGTTGGGGGTaGGCCTTGAGTGGGTCTCAGGTGTGGGCCGGGTGGTGGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WWALRVSLLWASCWG*ALSGSQVWAGWWWA Trigger: GGCCCACCACCACCCGGCCCACACCTGAGACCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGATACCCTCAAAGCCCACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TCCTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGCTGGCTCCCATTAACAGGCGGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWWWWALRGSRLWAS*WWWALLAPINRRSW Trigger: CCAAGACCGCCTGTTAATGGGAGCCAGCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TGGTGGTGGTGGGCTTTGAGGGTATCGCTGCTGTGGGCCTCCTGTTaGGGGTGGGCCTTGAGTGGGTCTCAGGTGTGGGCCGGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWALRVSLLWASC*GWALSGSQVWAGWW Trigger: CCACCACCCGGCCCACACCTGAGACCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGATACCCTCAAAGCCCACCACCACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | TCCTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTaGTGGTGGTGGGCTTTGAGGGTATCGCTGCTGTGGGCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SWWWWALRGSRLWAS*WWWALRVSLLWASC Trigger: ACAGGAGGCCCACAGCAGCGATACCCTCAAAGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 90 bp | CTGTGGGCCTCCTGGTGGTGGTGGGCTTTGAGGGTATCGCTGCTGTaGGCCTCCTGTTGGGGGTGGGCCTTGAGTGGGTCTCAGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWASWWWWALRVSLL*ASCWGWALSGSQVW Trigger: CCACACCTGAGACCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGATACCCTCAAAGCCCACCACCACCAGGAGGCCCACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS CCA 90 bp | TTGTGGTGGGCCTTGTGGGTTTCCAGCCAGAGGAGGTGTTTGCTGTaGGCCTCCTGTTGGGTGTGGGCCTTGAGTGGGTCTCGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWWALWVSSQRRCLL*ASCWVWALSGSRLW Trigger: CCACAGCCGAGACCCACTCAAGGCCCACACCCAACAGGAGGCCCACAGCAAACACCTCCTCTGGCTGGAAACCCACAAGGCCCACCACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS-3UTR CAA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTTCGGCTGTGGGCCTGTaGGGGGTGGTGGGCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WENFLREPLSYSFLSRNFSAVGL*GVVGLE Trigger: CTCAAGGCCCACCACCCCCAACAGGCCCACAGCCGA...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CAA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGGCTGTGGGCCTCCTGTaGGGTGTGGGCCTTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GELSEGAIVLFISVTEFWAVGLL*GVGLEW Trigger: CCACTCAAGGCCCACACCCAACAGGAGGCCCACAGC...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
||
| CDS-3UTR CAA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTTGTTGGGGGTGGGCCTaGAGTGGGTCTCGGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ENFLREPLSYSFLSRNFGCWGWA*SGSRVW Trigger: CCACACCCGAGACCCACTCAAGGCCCACCCCCAACA...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
||
| CDS-3UTR CAA 90 bp | GAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGTTGTTGGGGGTGGGCCTaGAGTGGGTCTCGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ENFLREPLSYSFLSRNFGCWGWA*SGSRLW Trigger: CCACAGCCGAGACCCACTCAAGGCCCACCCCCAACA...ACCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
||
| CDS-3UTR CAA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTTGTTGGGGGTGGGCCTaGAGTGGGTCTCAGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WENFLREPLSYSFLSRNFCWGWA*SGSQVW Trigger: CCACACCTGAGACCCACTCAAGGCCCACCCCCAACA...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
||
| CDS-3UTR CAA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGCCTTGTGGTGGGCCTaGTGGGTTTCCAGCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WENFLREPLSYSFLSRNFALWWA*WVSSQR Trigger: CCTCTGGCTGGAAACCCACAAGGCCCACCACAAGGC...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
||
| CDS-3UTR CAA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTTCCCTGGGGTCTGCCTaGTGGTGGGCCTTGTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WENFLREPLSYSFLSRNFSLGSA*WWALWV Trigger: AACCCACAAGGCCCACCACAAGGCAGACCCCAGGGA...AAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS-3UTR CAA 90 bp | GGAGAACTTTCTGAGGGAGCCATTGTCCTATTCATTTCTGTCACGGAATTTTGGATTCGGGATCTGGATTaGATTCTGAAGTTCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: GELSEGAIVLFISVTEFWIRDLD*ILKFFT Trigger: CGTGAAGAACTTCAGAATCAAATCCAGATCCCGAAT...CCAAAATTCCGTGACAGAAATGAATAGGACAATGGCTCCCTCAGAAAGTTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076061.4 |
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| CDS CAA 72 bp | GGGTCTCGGCTGTGGGCCACCTGGTGGTGGTGGGCCTaGAGGGGGTCGCTGCTGTGGGCCTCCTGTTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRLWATWWWWA*RGSLLWASCWG Trigger: CCCCCAACAGGAGGCCCACAGCAGCGACCCCCTCAAGGCCCACCACCACCAGGTGGCCCACAGCCGAGACCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS CCA 72 bp | GCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALRGSRLWASWW*WALRGSLLWAS Trigger: GGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 72 bp | TGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALRGSRLWASW*WWALRGSLLWA Trigger: GGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 72 bp | TGGGCCTTGAGTGGGTCTCGGGTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALSGSRVWASW*WWALRGSRLWA Trigger: GGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACACCCGAGACCCACTCAAGGCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 72 bp | GGGTGGGCCTTGAGTGGGTCTCGGGTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GWALSGSRVWAS*WWWALRGSRLW Trigger: CCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACACCCGAGACCCACTCAAGGCCCACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 72 bp | GTCTCGGCTGTGGGCCTGTTGGGGGTGGGCCTTGAGTaGGTCTCGGGTGTGGGCCTCCTGGTGGTGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VSAVGLLGVGLE*VSGVGLLVVVG Trigger: GCCCACCACCACCAGGAGGCCCACACCCGAGACCCACTCAAGGCCCACCCCCAACAGGCCCACAGCCGAGAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 72 bp | GGGTGGGCCTTGAGTGGGTCTCGGCTGTGGGCCTGTTaGGGGTGGGCCTTGAGTGGGTCTCGGGTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GWALSGSRLWAC*GWALSGSRVWA Trigger: GGCCCACACCCGAGACCCACTCAAGGCCCACCCCCAACAGGCCCACAGCCGAGACCCACTCAAGGCCCACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 72 bp | TGGGCCTTGAGGGGGTCGCTGCTGTGGGCCTCCTGTTaGGGGTGGGCCTTGAGTGGGTCTCGGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALRGSLLWASC*GWALSGSRLWA Trigger: GGCCCACAGCCGAGACCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGACCCCCTCAAGGCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CAA 72 bp | GGGTCTCGGCTGTGGACCTGCTGGTGGTGGTGGGCCTaGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRLWTCWWWWA*RGSRLWASWWW Trigger: CCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGTCCACAGCCGAGACCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CAA 90 bp | GCCTTGAGGGGGTCTCGGCTGTGGACCTGCTGGTGGTGGTGGGCCTaGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTGGTGGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALRGSRLWTCWWWWA*RGSRLWASWWWWAL Trigger: CAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGTCCACAGCCGAGACCCCCTCAAGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CAA 90 bp | GCCTTGAGTGGGTCTCGGCTGTGGGCCTGTTGGGGGTGGTGGGCCTaGAGGGGGTCTCGGCTGTGGGCCACCTGGTGGTGGTGGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALSGSRLWACWGWWA*RGSRLWATWWWWAL Trigger: CAAGGCCCACCACCACCAGGTGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCCCCAACAGGCCCACAGCCGAGACCCACTCAAGGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CAA 90 bp | TGGGCCTTGAGTGGGTCTCGGCTGTGGGCCTGTTGGGGGTGGGCCTaGAGTGGGTCTCGGGTGTGGGCCTCCTGGTGGTGGTGGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: WALSGSRLWACWGWA*SGSRVWASWWWWAL Trigger: CAAGGCCCACCACCACCAGGAGGCCCACACCCGAGACCCACTCAAGGCCCACCCCCAACAGGCCCACAGCCGAGACCCACTCAAGGCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CAA 90 bp | CTCCTGTTGGGGGTGGGCCTTGAGTGGGTCTCGGCTGTGGGCCTGTaGGGGGTGGGCCTTGAGTGGGTCTCGGGTGTGGGCCTCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLGVGLEWVSAVGL*GVGLEWVSGVGLLV Trigger: CACCAGGAGGCCCACACCCGAGACCCACTCAAGGCCCACCCCCAACAGGCCCACAGCCGAGACCCACTCAAGGCCCACCCCCAACAGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 72 bp | GCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALRGSLLWASWW*WALRGSLLWAS Trigger: GGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 72 bp | TTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRGSRLWASWWW*ALRGSLLWASW Trigger: CCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
||
| CDS CCA 72 bp | TTGAGTGGGTCTCGGGTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSGSRVWASWWW*ALRGSRLWASW Trigger: CCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACACCCGAGACCCACTCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS CAA 90 bp | GCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTGGTGGGCTTaGAGGGTATCGCTGCTGTGGGCCTCCTGTTGGGGGTGGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ALRGSRLWASWWWWA*RVSLLWASCWGWAL Trigger: CAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGATACCCTCAAAGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS CCA 72 bp | TGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTaGTGGTGGGCTTTGAGGGTATCGCTGCTGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WALRGSRLWASW*WWALRVSLLWA Trigger: GGCCCACAGCAGCGATACCCTCAAAGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS CCA 72 bp | TTGAGGGGGTCGCTGCTGTGGGCCTCCTGTTGGGGGTaGGCCTTGAGTGGGTCTCGGCTGTGGGCCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LRGSLLWASCWG*ALSGSRLWACW Trigger: CCAACAGGCCCACAGCCGAGACCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGACCCCCTCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS CAA 72 bp | GGGTCTCGGCTGTGGGCCTCCTGGTGGTGGTGGGCTTaGAGGGTATCGCTGCTGTGGGCCTCCTGTTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GSRLWASWWWWA*RVSLLWASCWG Trigger: CCCCCAACAGGAGGCCCACAGCAGCGATACCCTCAAAGCCCACCACCACCAGGAGGCCCACAGCCGAGACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS CCA 72 bp | TGGGCTTTGAGGGTATCGCTGCTGTGGGCCTCCTGTTaGGGGTGGGCCTTGAGTGGGTCTCAGGTGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WALRVSLLWASC*GWALSGSQVWA Trigger: GGCCCACACCTGAGACCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGATACCCTCAAAGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS CCA 72 bp | TCCTGGTGGTGGTGGGCTTTGAGGGTATCGCTGCTGTaGGCCTCCTGTTGGGGGTGGGCCTTGAGTGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: SWWWWALRVSLL*ASCWGWALSGS Trigger: AGACCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGATACCCTCAAAGCCCACCACCACCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS CAA 90 bp | TCTGCCTTGTGGTGGGCCTTGTGGGTTTCCAGCCAGAGGAGGTGTTaGCTGTGGGCCTCCTGTTGGGTGTGGGCCTTGAGTGGGTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SALWWALWVSSQRRC*LWASCWVWALSGSR Trigger: CCGAGACCCACTCAAGGCCCACACCCAACAGGAGGCCCACAGCAAACACCTCCTCTGGCTGGAAACCCACAAGGCCCACCACAAGGCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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| CDS TCA 72 bp | CTGGCTCCCATTAACAGGCGGTCTTGGTTGGGACCCTaGAGGAGGTGGCCTTTGATTCGGGATCTGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: LAPINRRSWLGP*RRWPLIRDLDL Trigger: CAAATCCAGATCCCGAATCAAAGGCCACCTCCTTCAGGGTCCCAACCAAGACCGCCTGTTAATGGGAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076061.4 ENSMUST00000178961.2 |
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