Pregenerated sensors for PROX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042320Ensembl transcript IDs: ENSMUST00000110249.3, ENSMUST00000177289.9
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCCTGAGTGCCAACCTGATCAGATGGCAGTGCCAATCCACGGGTaGCCTGCTAGCATGGATTTTTCCTGTTGGAGATCCCAAGTGACA | + |
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Preference number: 1 (lower is better) Translates to: APECQPDQMAVPIHG*PASMDFSCWRSQVT Trigger: TGTCACTTGGGATCTCCAACAGGAAAAATCCATGCTAGCAGGGCACCCGTGGATTGGCACTGCCATCTGATCAGGTTGGCACTCAGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| 3UTR GCA 90 bp | CTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTaGCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTTGG | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPPIHRSTYL*LSVQGLNLFTTTTW Trigger: CCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR CCA 90 bp | AATTCTGGACAAGAAAACGAGTATTCAGAACGGCAGTTGCATCTATaGGAGGGGTTCCTCTTGTGCTTTGATGTGACTACAGCTAAACTG | + |
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Preference number: 1 (lower is better) Translates to: NSGQENEYSERQLHL*EGFLLCFDVTTAKL Trigger: CAGTTTAGCTGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCATAGATGCAACTGCCGTTCTGAATACTCGTTTTCTTGTCCAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGCTGTCCCTAAGTTCCTaGTCCACCTGCCTCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: FVDQAGLQFTDPPISASPLSLSS*STCLHL Trigger: GAGGTGGAGGCAGGTGGATCAGGAACTTAGGGACAG...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR TCA 90 bp | GATGATGAAGCGCTCCTGAGTGCCAACCTGATCAGATGGCAGTGCCAATCCACGTCCCAAGTGACAGCATaGGTCCAGCGTACACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: DDEALLSANLIRWQCQSTSQVTA*VQRTQP Trigger: TGGCTGTGTACGCTGGACTCATGCTGTCACTTGGGA...CGTGGATTGGCACTGCCATCTGATCAGGTTGGCACTCAGGAGCGCTTCATCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| 3UTR-3UTR CCA 90 bp | GTGACTACAGCTAAACTGCCATTTATGACAAAGCTTGAGCCACCCTGGGCCGTTCTCCACCTCTCACCTTaGACTCCCAGGCCTGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VTTAKLPFMTKLEPPWAVLHLSP*TPRPVP Trigger: TGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAG...AACGGCCCAGGGTGGCTCAAGCTTTGTCATAAATGGCAGTTTAGCTGTAGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR CAA 90 bp | ACAGATGCAAGCCACAGCAGTGCCGACCGAGGTTCTTTAGGAAGTTaGCCGAAGCCATCAGTGAACGTCTTGGATGATGAAGCGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: TDASHSSADRGSLGS*PKPSVNVLDDEALL Trigger: CAGGAGCGCTTCATCATCCAAGACGTTCACTGATGGCTTCGGCAAACTTCCTAAAGAACCTCGGTCGGCACTGCTGTGGCTTGCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| 3UTR-3UTR TCA 90 bp | GTGACTACAGCTAAACTGCCATTTATGACAAAGCTTGAGCCACCCTGGGCCGTTCTGTCCCTAAGTTCCTaGTCCACCTGCCTCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: VTTAKLPFMTKLEPPWAVLSLSS*STCLHL Trigger: GAGGTGGAGGCAGGTGGATCAGGAACTTAGGGACAG...AACGGCCCAGGGTGGCTCAAGCTTTGTCATAAATGGCAGTTTAGCTGTAGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR CAA 90 bp | GACCGAGGTTCTTTAGGAAGTTTGCCGAAGCCATCAGTGAACGTCTaGGATGATGAAGCGCTCCTGAGTGCCAACCTGATCAGATGGCAG | + |
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Preference number: 2 (lower is better) Translates to: DRGSLGSLPKPSVNV*DDEALLSANLIRWQ Trigger: CTGCCATCTGATCAGGTTGGCACTCAGGAGCGCTTCATCATCCAAGACGTTCACTGATGGCTTCGGCAAACTTCCTAAAGAACCTCGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGTCTCTGATAATTCTGGACAAGAAAACGAGTATTCAGAACGGCAGTTGCCTCCACCTCTCACCTTaGACTCCCAGGCCTGTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VKSLIILDKKTSIQNGSCLHLSP*TPRPVP Trigger: TGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAG...GCAACTGCCGTTCTGAATACTCGTTTTCTTGTCCAGAATTATCAGAGACTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR CCA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTCGGCAGTTGCATCTATaGGAGGGGTTCCTCTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: HHHLAMNLLPELKEYQEIRQLHL*EGFLLC Trigger: GCACAAGAGGAACCCCTCCCATAGATGCAACTGCCG...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGTCTACTCATTTTGTTTaGTCTTTGTCTTTGTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: FVDQAGLQFTDPPISASPSTHFV*SLSLWP Trigger: TGGCCACAAAGACAAAGATCAAACAAAATGAGTAGA...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR CAA 90 bp | TCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTaGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATT | + |
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Preference number: 2 (lower is better) Translates to: SLPLRAGIKPVYHHH*AMNLLPELKEYQEI Trigger: AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR TCA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTTCTACTCATTTTGTTTaGTCTTTGTCTTTGTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: HHHLAMNLLPELKEYQEISTHFV*SLSLWP Trigger: TGGCCACAAAGACAAAGATCAAACAAAATGAGTAGA...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR CAA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGCCTCCACCTCTCACCTaGGACTCCCAGGCCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: FVDQAGLQFTDPPISASPPPPLT*DSQACA Trigger: GGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGG...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR TCA 72 bp | TCTTTGTCTTTGTGGCCAAGGCTGTCCCTAAGTTCCTaGTCCACCTGCCTCCACCTCTCACCTTGGACTCCC | + |
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Preference number: 3 (lower is better) Translates to: SLSLWPRLSLSS*STCLHLSPWTP Trigger: GGGAGTCCAAGGTGAGAGGTGGAGGCAGGTGGATCAGGAACTTAGGGACAGCCTTGGCCACAAAGACAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR GCA 72 bp | AGGACTGTTAGCAGACCCAGTGTTCCAGCAGACAGATaGAAGCCACAGCAGTGCCGACCGAGGTTCTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: RTVSRPSVPADR*KPQQCRPRFFR Trigger: CCTAAAGAACCTCGGTCGGCACTGCTGTGGCTTGCATCTGTCTGCTGGAACACTGGGTCTGCTAACAGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTaGCTCTCCGTGCAGGGATTAAACCTGTTTACCACC | + |
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Preference number: 3 (lower is better) Translates to: PGWPPIHRSTYL*LSVQGLNLFTT Trigger: GGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR GCA 72 bp | TGCCAACCTGATCAGATGGCAGTGCCAATCCACGGGTaGCCTGCTAGCATGGATTTTTCCTGTTGGAGATCC | + |
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Preference number: 3 (lower is better) Translates to: CQPDQMAVPIHG*PASMDFSCWRS Trigger: GGATCTCCAACAGGAAAAATCCATGCTAGCAGGGCACCCGTGGATTGGCACTGCCATCTGATCAGGTTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| 3UTR-3UTR CAA 90 bp | GTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGCCTCCACCTCTCACCTaGGACTCCCAGGCCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: VYHHHLAMNLLPELKEYQPPPLT*DSQACA Trigger: GGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGG...CTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR CAA 90 bp | GTGTTCCAGCAGACAGATGCAAGCCACAGCAGTGCCGACCGAGGTTCTTTAGGATGGGAGGGGTTCCTCTaGTGCTTTGATGTGACTACA | + |
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Preference number: 3 (lower is better) Translates to: VFQQTDASHSSADRGSLGWEGFL*CFDVTT Trigger: TGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCA...TCCTAAAGAACCTCGGTCGGCACTGCTGTGGCTTGCATCTGTCTGCTGGAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| 3UTR-3UTR CAA 90 bp | CACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTTGGGAGGGGTTCCTCTaGTGCTTTGATGTGACTACA | + |
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Preference number: 3 (lower is better) Translates to: HFVDQAGLQFTDPPISASWEGFL*CFDVTT Trigger: TGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCA...AGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR CAA 90 bp | TCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTATTCAGAACGGCAGTaGCATCTATGGGAGGGGTTC | + |
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Preference number: 3 (lower is better) Translates to: SLCRPGWPPIHRSTYLCLYSERQ*HLWEGF Trigger: GAACCCCTCCCATAGATGCAACTGCCGTTCTGAATA...GAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR CAA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGCTTCTGATTGCAAACTaGTGTTCCTTTCCCAATAGT | + |
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Preference number: 3 (lower is better) Translates to: FVDQAGLQFTDPPISASPLLIAN*CSFPNS Trigger: ACTATTGGGAAAGGAACACAAGTTTGCAATCAGAAG...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR CAA 90 bp | TCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTTCTACTCATTTTGTTaGATCTTTGTCTTTGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: SLCRPGWPPIHRSTYLCLFYSFC*IFVFVA Trigger: GGCCACAAAGACAAAGATCAAACAAAATGAGTAGAA...GAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR CAA 90 bp | TCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCGCCGTTCTACTCATTTaGTTTGATCTTTGTCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: SLCRPGWPPIHRSTYLCLAVLLI*FDLCLC Trigger: ACAAAGACAAAGATCAAACAAAATGAGTAGAACGGC...GAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR CCA 72 bp | GCTAAACTGCCATTTATGACAAAGCTTGAGCCACCCTaGGCCGTTCTACTCATTTTGTTTGATCTTTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: AKLPFMTKLEPP*AVLLILFDLCL Trigger: AAGACAAAGATCAAACAAAATGAGTAGAACGGCCCAGGGTGGCTCAAGCTTTGTCATAAATGGCAGTTTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR CAA 90 bp | GTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGTTCTACTCATTTTGTTaGATCTTTGTCTTTGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: VYHHHLAMNLLPELKEYQFYSFC*IFVFVA Trigger: GGCCACAAAGACAAAGATCAAACAAAATGAGTAGAA...CTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| 3UTR-3UTR CAA 90 bp | AAACCTGTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAACTTCTGATTGCAAACTaGTGTTCCTTTCCCAATAGT | + |
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Preference number: 3 (lower is better) Translates to: KPVYHHHLAMNLLPELKELLIAN*CSFPNS Trigger: ACTATTGGGAAAGGAACACAAGTTTGCAATCAGAAG...TTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | GTCTTTGTGGCCAAGGCTGTCCCTAAGTTCCTGATCCACCTGCCTCCACCTCTCAGGGGGAGCTGCTGCTaGCTCAGCCCCCACGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VFVAKAVPKFLIHLPPPLRGSCC*LSPHGC Trigger: GCAACCGTGGGGGCTGAGCCAGCAGCAGCTCCCCCT...GAGAGGTGGAGGCAGGTGGATCAGGAACTTAGGGACAGCCTTGGCCACAAAGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTTCTGATGCTAGCCCCTaGCAGCTTCGCTCCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PASTSHLGLPGLCHHTCPSDASP*QLRSCC Trigger: GCAGCAGGAGCGAAGCTGCCAGGGGCTAGCATCAGA...AGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR TCA 90 bp | CCTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTACTTCTCCCTGGAGGTaGAGGCTGGTTTCTGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PASTSHLGLPGLCHHTCPTSPWR*RLVSAL Trigger: GAGGGCAGAAACCAGCCTTCACCTCCAGGGAGAAGT...AGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR TCA 90 bp | CCTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTGGAAGAAAAAGGAAGTaGGTCAGCCACGCCCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: PASTSHLGLPGLCHHTCPGRKRK*VSHAPQ Trigger: CTGCGGGGCGTGGCTGACTCACTTCCTTTTTCTTCC...AGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | CCTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTTGCTCCGGGCTTTACTaGTCCACAGAGGTCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: PASTSHLGLPGLCHHTCPCSGLY*STEVLA Trigger: AGCAAGGACCTCTGTGGAGCAGTAAAGCCCGGAGCA...AGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | CTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTCCTTGGGACACGGCCCTaGTCAGTTCTTTCCTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LPPPLTLDSQACAIILALLGTRP*SVLSSE Trigger: CTCTGAGGAAAGAACTGAGCAGGGCCGTGTCCCAAG...GAGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | CACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTGACAGGGGGAGCTGCTaGTGGCTCAGCCCCCACGGT | + |
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Preference number: 4 (lower is better) Translates to: HFVDQAGLQFTDPPISASDRGSC*WLSPHG Trigger: ACCGTGGGGGCTGAGCCAGCAGCAGCTCCCCCTGTC...AGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | CTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTCGGGGACCTTGGTGCATaGGAAGGCTCTGCTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: LPPPLTLDSQACAIILALGDLGA*EGSAFS Trigger: AGAGAAAGCAGAGCCTTCCCATGCACCAAGGTCCCC...GAGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | CACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTAGGGGGAGCTGCTGCTaGCTCAGCCCCCACGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: HFVDQAGLQFTDPPISASRGSCC*LSPHGC Trigger: GCAACCGTGGGGGCTGAGCCAGCAGCAGCTCCCCCT...AGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR TCA 90 bp | CAGATCCACCTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCCAGATGGACCGGGGTaGGAGACAGGGGGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QIHLSLPLRAGIKPVYHHPDGPG*ETGGAA Trigger: AGCAGCTCCCCCTGTCTCTCACCCCGGTCCATCTGG...GTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAGGTGGATCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | CTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTTGGCTAGAGACAGGGGGAGCTaGTGCTGGCTCAGCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LSLPLRAGIKPVYHHHLARDRGS*CWLSPH Trigger: GTGGGGGCTGAGCCAGCAGCAGCTCCCCCTGTCTCT...AGCCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | CTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTCGCTGGGCTTCTCTCCTaGTCCATGCAGGTTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LPPPLTLDSQACAIILALAGLLS*SMQVSS Trigger: AGAAGAAACCTGCATGGACCAGGAGAGAAGCCCAGC...GAGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | GTGTTCCAGCAGACAGATGCAAGCCACAGCAGTGCCGACCGAGGTTCTTTAGGACCTCGGGGAGCTTCTTaGCTCAGTTCCTCCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VFQQTDASHSSADRGSLGPRGAS*LSSSWA Trigger: AGCCCAGGAGGAACTGAGCCAAGAAGCTCCCCGAGG...TCCTAAAGAACCTCGGTCGGCACTGCTGTGGCTTGCATCTGTCTGCTGGAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | GTGTTCCAGCAGACAGATGCAAGCCACAGCAGTGCCGACCGAGGTTCTTTAGGACATGCAGGTTTCTTCTaGCAGGTGGGTGCAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: VFQQTDASHSSADRGSLGHAGFF*QVGAGP Trigger: CGGACCTGCACCCACCTGGCAGAAGAAACCTGCATG...TCCTAAAGAACCTCGGTCGGCACTGCTGTGGCTTGCATCTGTCTGCTGGAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | TCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTGGGCTCTGTGCTGGTaGTCTGGGCTCTGTGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLCRPGWPPIHRSTYLCLWALCW*SGLCGL Trigger: CAGGCCACAGAGCCCAGAGCACCAGCACAGAGCCCA...GAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | ACTCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTGGGCTCTGTGCTGGTaGTCTGGGCTCTGTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: THFVDQAGLQFTDPPISAWALCW*SGLCGL Trigger: CAGGCCACAGAGCCCAGAGCACCAGCACAGAGCCCA...GGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CAGATCCACCTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACGCTGTTCCTCGGCCTTaGCCTCGGGGAGCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QIHLSLPLRAGIKPVYHHAVPRP*PRGASW Trigger: CCAAGAAGCTCCCCGAGGGCAAGGCCGAGGAACAGC...GTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAGGTGGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTTGTGGCCAAGGCTGTCCCTAAGTTCCTGATCCACCTGCCTCCACCTCTCGTGAAGGCTGGTTTCTaGCCTCTGATGCTAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFVAKAVPKFLIHLPPPLVKAGF*PLMLAP Trigger: AGGGGCTAGCATCAGAGGGCAGAAACCAGCCTTCAC...GAGAGGTGGAGGCAGGTGGATCAGGAACTTAGGGACAGCCTTGGCCACAAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | GATGATGAAGCGCTCCTGAGTGCCAACCTGATCAGATGGCAGTGCCAATCCACGACCCCAGCTTGTGGCTaGATCTTTCTGGGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DDEALLSANLIRWQCQSTTPACG*IFLGRV Trigger: CACCCTGCCCAGAAAGATCCAGCCACAAGCTGGGGT...CGTGGATTGGCACTGCCATCTGATCAGGTTGGCACTCAGGAGCGCTTCATCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTTGGCTAGCCCCCACGGTTGCTaGGCAGACTCTGGGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLPLRAGIKPVYHHHLASPHGC*ADSGEV Trigger: TACCTCCCCAGAGTCTGCCCAGCAACCGTGGGGGCT...AGCCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | CACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTAGCCCCCACGGTTGCTaGGCAGACTCTGGGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HFVDQAGLQFTDPPISASSPHGC*ADSGEV Trigger: TACCTCCCCAGAGTCTGCCCAGCAACCGTGGGGGCT...AGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | CCTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTTTTGGTAGGGGACTCTaGTATGATCTAGGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PASTSHLGLPGLCHHTCPFGRGL*YDLGTP Trigger: AGGAGTCCCTAGATCATATCAGAGTCCCCTACCAAA...AGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR TCA 90 bp | CTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTTGGCTTTGGCCTTCTTCAGGTaGCCAGGGCTCAGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPLRAGIKPVYHHHLALAFFR*PGLRPS Trigger: GGAAGGCCTGAGCCCTGGTCACCTGAAGAAGGCCAA...AGCCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CATCTATGGGAGGGGTTCCTCTTGTGCTTTGATGTGACTACAGCTAAACTGCCACGTCCTGGGGAGGGCTaGCACTCCATTGGCCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: HLWEGFLLCFDVTTAKLPRPGEG*HSIGHR Trigger: CCGATGGCCAATGGAGTGGCAGCCCTCCCCAGGACG...TGGCAGTTTAGCTGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCATAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | ATCTTTGTCTTTGTGGCCAAGGCTGTCCCTAAGTTCCTGATCCACCTGCCTCCATGCCTCTGCGGTGGCTaGGCTTCTCTCCTGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IFVFVAKAVPKFLIHLPPCLCGG*ASLLVH Trigger: ATGGACCAGGAGAGAAGCCCAGCCACCGCAGAGGCA...TGGAGGCAGGTGGATCAGGAACTTAGGGACAGCCTTGGCCACAAAGACAAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | GATGATGAAGCGCTCCTGAGTGCCAACCTGATCAGATGGCAGTGCCAATCCACGCTGGCCCTCTTAGCCTaGATGTGCTCGTCCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DDEALLSANLIRWQCQSTLALLA*MCSSQN Trigger: GTTTTGGGACGAGCACATCCAGGCTAAGAGGGCCAG...CGTGGATTGGCACTGCCATCTGATCAGGTTGGCACTCAGGAGCGCTTCATCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | GTGACTACAGCTAAACTGCCATTTATGACAAAGCTTGAGCCACCCTGGGCCGTTAGCGCAAGCTCTCCCTaGCTCTGCCTGACACCGACG | + |
|
Preference number: 4 (lower is better) Translates to: VTTAKLPFMTKLEPPWAVSASSP*LCLTPT Trigger: CGTCGGTGTCAGGCAGAGCCAGGGAGAGCTTGCGCT...AACGGCCCAGGGTGGCTCAAGCTTTGTCATAAATGGCAGTTTAGCTGTAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | TCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCCTCCACCAAGGCCCGTaGGCCAGAAGGACAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLCRPGWPPIHRSTYLCLLHQGP*ARRTEH Trigger: ATGCTCTGTCCTTCTGGCCCACGGGCCTTGGTGGAG...GAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | TCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCACGGAGTCCACAGCTTaGGACACGGCCCTGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLCRPGWPPIHRSTYLCLTESTA*DTALLS Trigger: ACTGAGCAGGGCCGTGTCCCAAGCTGTGGACTCCGT...GAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGGGGAACCCCAGCTTGTaGCTGGATCTTTCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVDQAGLQFTDPPISASPGNPSL*LDLSGQ Trigger: CTGCCCAGAAAGATCCAGCCACAAGCTGGGGTTCCC...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR TCA 90 bp | CTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTTGGCTACTTCTCCCTGGAGGTaGAGGCTGGTTTCTGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPLRAGIKPVYHHHLATSPWR*RLVSAL Trigger: GAGGGCAGAAACCAGCCTTCACCTCCAGGGAGAAGT...AGCCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR TCA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGGGAAGCTGGGTGATTTaGGCATCTCTGGGACGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVDQAGLQFTDPPISASPGSWVI*ASLGRH Trigger: GTGACGTCCCAGAGATGCTCAAATCACCCAGCTTCC...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | CATCTATGGGAGGGGTTCCTCTTGTGCTTTGATGTGACTACAGCTAAACTGCCAGTCTCTGCCTGCCTCTaGGGTGGCTGGGCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLWEGFLLCFDVTTAKLPVSACL*GGWASL Trigger: GAGAGAAGCCCAGCCACCGCAGAGGCAGGCAGAGAC...TGGCAGTTTAGCTGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCATAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTTGTAGGACATGCTCCTaGAAATGTCTTAGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PASTSHLGLPGLCHHTCPCRTCS*KCLSCC Trigger: GCAACAGCTAAGACATTTGCAGGAGCATGTCCTACA...AGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGCTGGCCCTCTTAGCCTaGATGTGCTCGTCCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FVDQAGLQFTDPPISASPLALLA*MCSSQN Trigger: GTTTTGGGACGAGCACATCCAGGCTAAGAGGGCCAG...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | TCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCTGTGCTGGTGCTCTaGGCTCTGTGGCCTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLCRPGWPPIHRSTYLCLSVLVL*ALWPVG Trigger: TCCTACAGGCCACAGAGCCCAGAGCACCAGCACAGA...GAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CAGATCCACCTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACTGGCTCAGTTCCTCCTaGGCTCTGTGCTGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QIHLSLPLRAGIKPVYHHWLSSS*ALCWCS Trigger: AGAGCACCAGCACAGAGCCCAGGAGGAACTGAGCCA...GTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAGGTGGATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | CTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTTGGCTTGGCTCAGTTCCTCCTaGGCTCTGTGCTGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPLRAGIKPVYHHHLAWLSSS*ALCWCS Trigger: AGAGCACCAGCACAGAGCCCAGGAGGAACTGAGCCA...AGCCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | GTGACTACAGCTAAACTGCCATTTATGACAAAGCTTGAGCCACCCTGGGCCGTTCCTCGGGGAGCTTCTTaGCTCAGTTCCTCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTTAKLPFMTKLEPPWAVPRGAS*LSSSWA Trigger: AGCCCAGGAGGAACTGAGCCAAGAAGCTCCCCGAGG...AACGGCCCAGGGTGGCTCAAGCTTTGTCATAAATGGCAGTTTAGCTGTAGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | GTGACTACAGCTAAACTGCCATTTATGACAAAGCTTGAGCCACCCTGGGCCGTTACGGAGTCCACAGCTTaGGACACGGCCCTGCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTTAKLPFMTKLEPPWAVTESTA*DTALLS Trigger: ACTGAGCAGGGCCGTGTCCCAAGCTGTGGACTCCGT...AACGGCCCAGGGTGGCTCAAGCTTTGTCATAAATGGCAGTTTAGCTGTAGTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGTCTTTCTGGGCAGGGTaGCAAGAGCAAGTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FVDQAGLQFTDPPISASPSFWAG*QEQVGP Trigger: AGGACCCACTTGCTCTTGCCACCCTGCCCAGAAAGA...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | ACTCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCACCCCAGCTTGTGGCTaGATCTTTCTGGGCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: THFVDQAGLQFTDPPISATPACG*IFLGRV Trigger: CACCCTGCCCAGAAAGATCCAGCCACAAGCTGGGGT...GGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR TCA 90 bp | CAGATCCACCTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACGACTCTGGGGAGGTATaGCTTTGGAAAGCTGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QIHLSLPLRAGIKPVYHHDSGEV*LWKAAS Trigger: GGACGCAGCTTTCCAAAGTCATACCTCCCCAGAGTC...GTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAGGTGGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR TCA 90 bp | ACTCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCGGAAGCTGGGTGATTTaGGCATCTCTGGGACGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: THFVDQAGLQFTDPPISAGSWVI*ASLGRH Trigger: GTGACGTCCCAGAGATGCTCAAATCACCCAGCTTCC...GGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | TTCATAGTCCTGACTGATCCTGTGCCCTGGCGTAAGAATCAACGAGGTACCCACCTTGGGACACGGCCCTaGTCAGTTCTTTCCTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIVLTDPVPWRKNQRGTHLGTRP*SVLSSE Trigger: CTCTGAGGAAAGAACTGAGCAGGGCCGTGTCCCAAG...GTGGGTACCTCGTTGATTCTTACGCCAGGGCACAGGATCAGTCAGGACTATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | CCTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTGGATCAAATAGCACTTaGTGTAATACGGAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PASTSHLGLPGLCHHTCPGSNST*CNTEST Trigger: TGTGGACTCCGTATTACAGCAAGTGCTATTTGATCC...AGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTTGGCTCAGCTTCGCTCCTGCTaGGTGAGATGTCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLPLRAGIKPVYHHHLAQLRSC*VRCLCG Trigger: TCCACAGAGACATCTCACGCAGCAGGAGCGAAGCTG...AGCCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | ATCTTTGTCTTTGTGGCCAAGGCTGTCCCTAAGTTCCTGATCCACCTGCCTCCAGTGAAGGCTGGTTTCTaGCCTCTGATGCTAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IFVFVAKAVPKFLIHLPPVKAGF*PLMLAP Trigger: AGGGGCTAGCATCAGAGGGCAGAAACCAGCCTTCAC...TGGAGGCAGGTGGATCAGGAACTTAGGGACAGCCTTGGCCACAAAGACAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | GTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGCGTCCTGGGGAGGGCTaGCACTCCATTGGCCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAMNLLPELKEYQRPGEG*HSIGHR Trigger: CCGATGGCCAATGGAGTGGCAGCCCTCCCCAGGACG...CTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR GCA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTGACAGGGGGAGCTGCTaGTGGCTCAGCCCCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: HHHLAMNLLPELKEYQEIDRGSC*WLSPHG Trigger: ACCGTGGGGGCTGAGCCAGCAGCAGCTCCCCCTGTC...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | ATCTTTGTCTTTGTGGCCAAGGCTGTCCCTAAGTTCCTGATCCACCTGCCTCCAGATTTCAGGGGACCTTaGTGCATGGGAAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFVFVAKAVPKFLIHLPPDFRGP*CMGRLC Trigger: GCAGAGCCTTCCCATGCACCAAGGTCCCCTGAAATC...TGGAGGCAGGTGGATCAGGAACTTAGGGACAGCCTTGGCCACAAAGACAAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | TTCATAGTCCTGACTGATCCTGTGCCCTGGCGTAAGAATCAACGAGGTACCCACGATTTCAGGGGACCTTaGTGCATGGGAAGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FIVLTDPVPWRKNQRGTHDFRGP*CMGRLC Trigger: GCAGAGCCTTCCCATGCACCAAGGTCCCCTGAAATC...GTGGGTACCTCGTTGATTCTTACGCCAGGGCACAGGATCAGTCAGGACTATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTTCTTTCTGGGCAGGGTaGCAAGAGCAAGTGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HFVDQAGLQFTDPPISASSFWAG*QEQVGP Trigger: AGGACCCACTTGCTCTTGCCACCCTGCCCAGAAAGA...AGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | GATGATGAAGCGCTCCTGAGTGCCAACCTGATCAGATGGCAGTGCCAATCCACGTCTAGGGACTCCTCTTaGAGAGACAGGACACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: DDEALLSANLIRWQCQSTSRDSS*RDRTHR Trigger: CCTATGTGTCCTGTCTCTCCAAGAGGAGTCCCTAGA...CGTGGATTGGCACTGCCATCTGATCAGGTTGGCACTCAGGAGCGCTTCATCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | GTGTTCCAGCAGACAGATGCAAGCCACAGCAGTGCCGACCGAGGTTCTTTAGGATTGCTGGGCAGACTCTaGGGAGGTATGACTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VFQQTDASHSSADRGSLGLLGRL*GGMTLE Trigger: TTCCAAAGTCATACCTCCCCAGAGTCTGCCCAGCAA...TCCTAAAGAACCTCGGTCGGCACTGCTGTGGCTTGCATCTGTCTGCTGGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGAGCTGCCTAAGCATCTaGTTTTCCCAGGTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FVDQAGLQFTDPPISASPSCLSI*FSQVWE Trigger: TTCCCACACCTGGGAAAATCAGATGCTTAGGCAGCT...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTCCAGATGGACCGGGGTaGGAGACAGGGGGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HHHLAMNLLPELKEYQEIPDGPG*ETGGAA Trigger: AGCAGCTCCCCCTGTCTCTCACCCCGGTCCATCTGG...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CATCTATGGGAGGGGTTCCTCTTGTGCTTTGATGTGACTACAGCTAAACTGCCACATGCAGGTTTCTTCTaGCAGGTGGGTGCAGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HLWEGFLLCFDVTTAKLPHAGFF*QVGAGP Trigger: CGGACCTGCACCCACCTGGCAGAAGAAACCTGCATG...TGGCAGTTTAGCTGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCATAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | ATCTTTGTCTTTGTGGCCAAGGCTGTCCCTAAGTTCCTGATCCACCTGCCTCCATTCAGGGGACCTTGGTaGATGGGAAGGCTCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IFVFVAKAVPKFLIHLPPFRGPW*MGRLCF Trigger: AAAGCAGAGCCTTCCCATGCACCAAGGTCCCCTGAA...TGGAGGCAGGTGGATCAGGAACTTAGGGACAGCCTTGGCCACAAAGACAAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTTTCAGGGGACCTTGGTaGATGGGAAGGCTCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HFVDQAGLQFTDPPISASFRGPW*MGRLCF Trigger: AAAGCAGAGCCTTCCCATGCACCAAGGTCCCCTGAA...AGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CATCTATGGGAGGGGTTCCTCTTGTGCTTTGATGTGACTACAGCTAAACTGCCAATGACTTTGGAAAGCTaGGTCCTGGGGAGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLWEGFLLCFDVTTAKLPMTLES*VLGRAA Trigger: GGCAGCCCTCCCCAGGACGCAGCTTTCCAAAGTCAT...TGGCAGTTTAGCTGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCATAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | TTCATAGTCCTGACTGATCCTGTGCCCTGGCGTAAGAATCAACGAGGTACCCACACATGCCTCGGACAATaGTCTCTACTCTGGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIVLTDPVPWRKNQRGTHTCLGQ*SLLWPS Trigger: AGAGGGCCAGAGTAGAGACCATTGTCCGAGGCATGT...GTGGGTACCTCGTTGATTCTTACGCCAGGGCACAGGATCAGTCAGGACTATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CATCTATGGGAGGGGTTCCTCTTGTGCTTTGATGTGACTACAGCTAAACTGCCATCTGTGCTGGTGCTCTaGGCTCTGTGGCCTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLWEGFLLCFDVTTAKLPSVLVL*ALWPVG Trigger: TCCTACAGGCCACAGAGCCCAGAGCACCAGCACAGA...TGGCAGTTTAGCTGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCATAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | CTGATAATTCTGGACAAGAAAACGAGTATTCAGAACGGCAGTTGCATCTATGGGGGTCCAGGCACCAGATaGGCAGCTGTTCCTCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIILDKKTSIQNGSCIYGGPGTR*AAVPRP Trigger: AGGCCGAGGAACAGCTGCTCATCTGGTGCCTGGACC...CCCATAGATGCAACTGCCGTTCTGAATACTCGTTTTCTTGTCCAGAATTATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | AAACCTGTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAAGGTCCAGGCACCAGATaGGCAGCTGTTCCTCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPVYHHHLAMNLLPELKEGPGTR*AAVPRP Trigger: AGGCCGAGGAACAGCTGCTCATCTGGTGCCTGGACC...TTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGTTTGGTAGGGGACTCTaGTATGATCTAGGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FVDQAGLQFTDPPISASPFGRGL*YDLGTP Trigger: AGGAGTCCCTAGATCATATCAGAGTCCCCTACCAAA...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | GTGACTACAGCTAAACTGCCATTTATGACAAAGCTTGAGCCACCCTGGGCCGTTCTGCCAAGACAGCCCTaGAGAACTCCTTCAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTTAKLPFMTKLEPPWAVLPRQP*RTPSVS Trigger: TGACACTGAAGGAGTTCTTCAGGGCTGTCTTGGCAG...AACGGCCCAGGGTGGCTCAAGCTTTGTCATAAATGGCAGTTTAGCTGTAGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTTTCTCTCCTGGTCCATaGAGGTTTCTTCTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFVDQAGLQFTDPPISASFSPGP*RFLLPG Trigger: ACCTGGCAGAAGAAACCTGCATGGACCAGGAGAGAA...AGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | ACTCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTTCTCTCCTGGTCCATaGAGGTTTCTTCTGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: THFVDQAGLQFTDPPISAFSPGP*RFLLPG Trigger: ACCTGGCAGAAGAAACCTGCATGGACCAGGAGAGAA...GGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTGCTGTTCCTCGGCCTTaGCCTCGGGGAGCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HHHLAMNLLPELKEYQEIAVPRP*PRGASW Trigger: CCAAGAAGCTCCCCGAGGGCAAGGCCGAGGAACAGC...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CATCTATGGGAGGGGTTCCTCTTGTGCTTTGATGTGACTACAGCTAAACTGCCACAGCTTCGCTCCTGCTaGGTGAGATGTCTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLWEGFLLCFDVTTAKLPQLRSC*VRCLCG Trigger: TCCACAGAGACATCTCACGCAGCAGGAGCGAAGCTG...TGGCAGTTTAGCTGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCATAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | GTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGTGCCTCTGCGGTGGCTaGGCTTCTCTCCTGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAMNLLPELKEYQCLCGG*ASLLVH Trigger: ATGGACCAGGAGAGAAGCCCAGCCACCGCAGAGGCA...CTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | AAACCTGTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAAAGCGCAAGCTCTCCCTaGCTCTGCCTGACACCGACG | + |
|
Preference number: 4 (lower is better) Translates to: KPVYHHHLAMNLLPELKESASSP*LCLTPT Trigger: CGTCGGTGTCAGGCAGAGCCAGGGAGAGCTTGCGCT...TTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CAGATCCACCTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACTTGCTGGGCAGACTCTaGGGAGGTATGACTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QIHLSLPLRAGIKPVYHHLLGRL*GGMTLE Trigger: TTCCAAAGTCATACCTCCCCAGAGTCTGCCCAGCAA...GTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAGGTGGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CCA 90 bp | ACTCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCGGGCTCAGGCCTTCCTaGATGTGGATGGAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: THFVDQAGLQFTDPPISAGLRPS*MWMEEK Trigger: TTTTTCTTCCATCCACATCCAGGAAGGCCTGAGCCC...GGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| 3UTR CAA 72 bp | AGCCACAGCAGTGCCGACCGAGGTTCTTTAGGAAGTTaGCCGAAGCCATCAGTGAACGTCTTGGATGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHSSADRGSLGS*PKPSVNVLDDE Trigger: TTCATCATCCAAGACGTTCACTGATGGCTTCGGCAAACTTCCTAAAGAACCTCGGTCGGCACTGCTGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | CAGATCCACCTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACTGTTGCTTCAGTAGATaGAGCTGTTCTTTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QIHLSLPLRAGIKPVYHHCCFSR*SCSFTR Trigger: CCGGGTGAAAGAACAGCTTCATCTACTGAAGCAACA...GTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAGGTGGATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | ACTCACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCAGCTGGGGTACCGCGTaGAGAAAAACATTAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: THFVDQAGLQFTDPPISASWGTA*RKTLVW Trigger: CCAAACTAATGTTTTTCTTCACGCGGTACCCCAGCT...GGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | ATCTTTGTCTTTGTGGCCAAGGCTGTCCCTAAGTTCCTGATCCACCTGCCTCCAAGCTGGGGTACCGCGTaGAGAAAAACATTAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFVFVAKAVPKFLIHLPPSWGTA*RKTLVW Trigger: CCAAACTAATGTTTTTCTTCACGCGGTACCCCAGCT...TGGAGGCAGGTGGATCAGGAACTTAGGGACAGCCTTGGCCACAAAGACAAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CATCTATGGGAGGGGTTCCTCTTGTGCTTTGATGTGACTACAGCTAAACTGCCAACATGCCTCGGACAATaGTCTCTACTCTGGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLWEGFLLCFDVTTAKLPTCLGQ*SLLWPS Trigger: AGAGGGCCAGAGTAGAGACCATTGTCCGAGGCATGT...TGGCAGTTTAGCTGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCATAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CTGATAATTCTGGACAAGAAAACGAGTATTCAGAACGGCAGTTGCATCTATGGGTCTGATGCTAGCCCCTaGCAGCTTCGCTCCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LIILDKKTSIQNGSCIYGSDASP*QLRSCC Trigger: GCAGCAGGAGCGAAGCTGCCAGGGGCTAGCATCAGA...CCCATAGATGCAACTGCCGTTCTGAATACTCGTTTTCTTGTCCAGAATTATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| 3UTR CAA 72 bp | TCTTTAGGAAGTTTGCCGAAGCCATCAGTGAACGTCTaGGATGATGAAGCGCTCCTGAGTGCCAACCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SLGSLPKPSVNV*DDEALLSANLI Trigger: GATCAGGTTGGCACTCAGGAGCGCTTCATCATCCAAGACGTTCACTGATGGCTTCGGCAAACTTCCTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | CTGATAATTCTGGACAAGAAAACGAGTATTCAGAACGGCAGTTGCATCTATGGGGTGCAGGTCCGAGACTaGGGAGGAAGCAAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIILDKKTSIQNGSCIYGVQVRD*GGSKTA Trigger: TGCTGTCTTGCTTCCTCCTCAGTCTCGGACCTGCAC...CCCATAGATGCAACTGCCGTTCTGAATACTCGTTTTCTTGTCCAGAATTATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | GTGACTACAGCTAAACTGCCATTTATGACAAAGCTTGAGCCACCCTGGGCCGTTTGTTGCTTCAGTAGATaGAGCTGTTCTTTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VTTAKLPFMTKLEPPWAVCCFSR*SCSFTR Trigger: CCGGGTGAAAGAACAGCTTCATCTACTGAAGCAACA...AACGGCCCAGGGTGGCTCAAGCTTTGTCATAAATGGCAGTTTAGCTGTAGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | GTTAAGTCTCTGATAATTCTGGACAAGAAAACGAGTATTCAGAACGGCAGTTGCTTGGCCTTCTTCAGGTaGCCAGGGCTCAGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKSLIILDKKTSIQNGSCLAFFR*PGLRPS Trigger: GGAAGGCCTGAGCCCTGGTCACCTGAAGAAGGCCAA...GCAACTGCCGTTCTGAATACTCGTTTTCTTGTCCAGAATTATCAGAGACTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | CTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTTGGCTTGTAGGACATGCTCCTaGAAATGTCTTAGCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPLRAGIKPVYHHHLACRTCS*KCLSCC Trigger: GCAACAGCTAAGACATTTGCAGGAGCATGTCCTACA...AGCCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | TTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTCCGGGATCAAATAGCACTTaGTGTAATACGGAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FVDQAGLQFTDPPISASPGSNST*CNTEST Trigger: TGTGGACTCCGTATTACAGCAAGTGCTATTTGATCC...CGGAGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR GCA 90 bp | AAACCTGTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAAATGACTTTGGAAAGCTaGGTCCTGGGGAGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPVYHHHLAMNLLPELKEMTLES*VLGRAA Trigger: GGCAGCCCTCCCCAGGACGCAGCTTTCCAAAGTCAT...TTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATAGTGCTCTGGGCTCTGTaGCCTGTAGGACATGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCLPPPLGYESPSRVKGIVLWAL*PVGHAP Trigger: AGGAGCATGTCCTACAGGCCACAGAGCCCAGAGCAC...TATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTGTGCTCTGGGCTCTGTaGCCTGTAGGACATGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HHHLAMNLLPELKEYQEIVLWAL*PVGHAP Trigger: AGGAGCATGTCCTACAGGCCACAGAGCCCAGAGCAC...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | GTTAAGTCTCTGATAATTCTGGACAAGAAAACGAGTATTCAGAACGGCAGTTGCCTCCACCAAGGCCCGTaGGCCAGAAGGACAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKSLIILDKKTSIQNGSCLHQGP*ARRTEH Trigger: ATGCTCTGTCCTTCTGGCCCACGGGCCTTGGTGGAG...GCAACTGCCGTTCTGAATACTCGTTTTCTTGTCCAGAATTATCAGAGACTTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTGGGAACCCCAGCTTGTaGCTGGATCTTTCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HHHLAMNLLPELKEYQEIGNPSL*LDLSGQ Trigger: CTGCCCAGAAAGATCCAGCCACAAGCTGGGGTTCCC...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CACTTTGTAGACCAGGCTGGCCTCCAATTCACAGATCCACCTATCTCTGCCTCTAGGCCTTCCTGGATGTaGATGGAAGAAAAAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HFVDQAGLQFTDPPISASRPSWM*MEEKGS Trigger: ACTTCCTTTTTCTTCCATCCACATCCAGGAAGGCCT...AGAGGCAGAGATAGGTGGATCTGTGAATTGGAGGCCAGCCTGGTCTACAAAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | TTCATAGTCCTGACTGATCCTGTGCCCTGGCGTAAGAATCAACGAGGTACCCACAGGCCTTCCTGGATGTaGATGGAAGAAAAAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIVLTDPVPWRKNQRGTHRPSWM*MEEKGS Trigger: ACTTCCTTTTTCTTCCATCCACATCCAGGAAGGCCT...GTGGGTACCTCGTTGATTCTTACGCCAGGGCACAGGATCAGTCAGGACTATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTGACTCTGGGGAGGTATaGCTTTGGAAAGCTGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HHHLAMNLLPELKEYQEIDSGEV*LWKAAS Trigger: GGACGCAGCTTTCCAAAGTCATACCTCCCCAGAGTC...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | ATCTTTGTCTTTGTGGCCAAGGCTGTCCCTAAGTTCCTGATCCACCTGCCTCCATGTTATAGTGTGTATTaGGAACTCGGAAAAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IFVFVAKAVPKFLIHLPPCYSVY*ELGKAP Trigger: CGGAGCTTTTCCGAGTTCTCAATACACACTATAACA...TGGAGGCAGGTGGATCAGGAACTTAGGGACAGCCTTGGCCACAAAGACAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | GTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGAGCTGCCTAAGCATCTaGTTTTCCCAGGTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VYHHHLAMNLLPELKEYQSCLSI*FSQVWE Trigger: TTCCCACACCTGGGAAAATCAGATGCTTAGGCAGCT...CTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | CATCTATGGGAGGGGTTCCTCTTGTGCTTTGATGTGACTACAGCTAAACTGCCATGTTATAGTGTGTATTaGGAACTCGGAAAAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HLWEGFLLCFDVTTAKLPCYSVY*ELGKAP Trigger: CGGAGCTTTTCCGAGTTCTCAATACACACTATAACA...TGGCAGTTTAGCTGTAGTCACATCAAAGCACAAGAGGAACCCCTCCCATAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR TCA 90 bp | GTTAAGTCTCTGATAATTCTGGACAAGAAAACGAGTATTCAGAACGGCAGTTGCCTGCCAAGACAGCCCTaGAGAACTCCTTCAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VKSLIILDKKTSIQNGSCLPRQP*RTPSVS Trigger: TGACACTGAAGGAGTTCTTCAGGGCTGTCTTGGCAG...GCAACTGCCGTTCTGAATACTCGTTTTCTTGTCCAGAATTATCAGAGACTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | AAACCTGTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATCTAGGGACTCCTCTTaGAGAGACAGGACACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVYHHHLAMNLLPELKESRDSS*RDRTHR Trigger: CCTATGTGTCCTGTCTCTCCAAGAGGAGTCCCTAGA...TTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATAAACCACTTGATCATCTaGGAGGTGATGCAGCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TCLPPPLGYESPSRVKGINHLII*EVMQRL Trigger: CAACCGCTGCATCACCTCCCAGATGATCAAGTGGTT...TATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTAACCACTTGATCATCTaGGAGGTGATGCAGCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HHHLAMNLLPELKEYQEINHLII*EVMQRL Trigger: CAACCGCTGCATCACCTCCCAGATGATCAAGTGGTT...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| 3UTR CAA 72 bp | CTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTaGGCTATGAATCTCCTTCCAGAGTTAAAGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LRAGIKPVYHHH*AMNLLPELKEY Trigger: GTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
||
| CDS-3UTR CCA 90 bp | GTTAAGTCTCTGATAATTCTGGACAAGAAAACGAGTATTCAGAACGGCAGTTGCGGGCTCAGGCCTTCCTaGATGTGGATGGAAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKSLIILDKKTSIQNGSCGLRPS*MWMEEK Trigger: TTTTTCTTCCATCCACATCCAGGAAGGCCTGAGCCC...GCAACTGCCGTTCTGAATACTCGTTTTCTTGTCCAGAATTATCAGAGACTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 90 bp | CCACGGTTGCTGGGCAGACTCTGGGGAGGTATGACTTTGGAAAGCTaGGTCCTGGGGAGGGCTGCCACTCCATTGGCCATCGGGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PRLLGRLWGGMTLES*VLGRAATPLAIGPT Trigger: CGTGGGCCCGATGGCCAATGGAGTGGCAGCCCTCCCCAGGACGCAGCTTTCCAAAGTCATACCTCCCCAGAGTCTGCCCAGCAACCGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 90 bp | GAGGCTGGAGCTGGGCAGCTGACCACTGGGAAACGAGTCTCTGCCTaGCTCTGCGGTGGCTGGGCTTCTCTCCTGGTCCATGCAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: EAGAGQLTTGKRVSA*LCGGWASLLVHAGF Trigger: GAAACCTGCATGGACCAGGAGAGAAGCCCAGCCACCGCAGAGGCAGGCAGAGACTCGTTTCCCAGTGGTCAGCTGCCCAGCTCCAGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 90 bp | TCGTCCCAAAACCAGTCAGCTTCAGTGAGGCTGGAGCTGGGCAGCTaGCCACTGGGAAACGAGTCTCTGCCTGCCTCTGCGGTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQNQSASVRLELGS*PLGNESLPASAVAG Trigger: CCCAGCCACCGCAGAGGCAGGCAGAGACTCGTTTCCCAGTGGTCAGCTGCCCAGCTCCAGCCTCACTGAAGCTGACTGGTTTTGGGACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 90 bp | GCTAGAACTCTGGTGAGGCTCGTTCTCCACGGTCCAGGCACCAGATaGGCAGCTGTTCCTCGGCCTTGCCCTCGGGGAGCTTCTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARTLVRLVLHGPGTR*AAVPRPCPRGASWL Trigger: GAGCCAAGAAGCTCCCCGAGGGCAAGGCCGAGGAACAGCTGCTCATCTGGTGCCTGGACCGTGGAGAACGAGCCTCACCAGAGTTCTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 90 bp | GGAAACGAGTCTCTGCCTGCCTCTGCGGTGGCTGGGCTTCTCTCCTaGTCCATGCAGGTTTCTTCTGCCAGGTGGGTGCAGGTCCGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GNESLPASAVAGLLS*SMQVSSARWVQVRD Trigger: GTCTCGGACCTGCACCCACCTGGCAGAAGAAACCTGCATGGACCAGGAGAGAAGCCCAGCCACCGCAGAGGCAGGCAGAGACTCGTTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 90 bp | CTCCCGACCCTTTTCTGGACAGCGCAAGCTCTCCCTGGCTCTGCCTaGCACCGACGAGCTAGGAGAGAGACACATGCCTCGGACAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPTLFWTAQALPGSA*HRRARRETHASDNG Trigger: ACCATTGTCCGAGGCATGTGTCTCTCTCCTAGCTCGTCGGTGTCAGGCAGAGCCAGGGAGAGCTTGCGCTGTCCAGAAAAGGGTCGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 90 bp | TTGGGCCCTCGCTCCCAGGCAGGGCTAGATTTCAGGGGACCTTGGTaGATGGGAAGGCTCTGCTTTCTCTTCCGCTCCCGACCCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGPRSQAGLDFRGPW*MGRLCFLFRSRPFS Trigger: AGAAAAGGGTCGGGAGCGGAAGAGAAAGCAGAGCCTTCCCATGCACCAAGGTCCCCTGAAATCTAGCCCTGCCTGGGAGCGAGGGCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 90 bp | TTCTTGGGCCCTCGCTCCCAGGCAGGGCTAGATTTCAGGGGACCTTaGTGCATGGGAAGGCTCTGCTTTCTCTTCCGCTCCCGACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLGPRSQAGLDFRGP*CMGRLCFLFRSRPF Trigger: AAAGGGTCGGGAGCGGAAGAGAAAGCAGAGCCTTCCCATGCACCAAGGTCCCCTGAAATCTAGCCCTGCCTGGGAGCGAGGGCCCAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | GATGATGAAGCGCTCCTGAGTGCCAACCTGATCAGATGGCAGTGCCAATCCACGCCCTCGGGGAGCTTCTaGGCTCAGTTCCTCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DDEALLSANLIRWQCQSTPSGSF*AQFLLG Trigger: GCCCAGGAGGAACTGAGCCAAGAAGCTCCCCGAGGG...CGTGGATTGGCACTGCCATCTGATCAGGTTGGCACTCAGGAGCGCTTCATCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| CDS CCA 90 bp | TGCCCAAGGGAACCCCAGCTTGTGGCTGGATCTTTCTGGGCAGGGTaGCAAGAGCAAGTGGGTCCTTATAGGCACTTCTCCCTGGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: CPREPQLVAGSFWAG*QEQVGPYRHFSLEV Trigger: CACCTCCAGGGAGAAGTGCCTATAAGGACCCACTTGCTCTTGCCACCCTGCCCAGAAAGATCCAGCCACAAGCTGGGGTTCCCTTGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 90 bp | ATGCCTCGGACAATGGTCTCTACTCTGGCCCTCTTAGCCTGGATGTaGTCGTCCCAAAACCAGTCAGCTTCAGTGAGGCTGGAGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MPRTMVSTLALLAWM*SSQNQSASVRLELG Trigger: GCCCAGCTCCAGCCTCACTGAAGCTGACTGGTTTTGGGACGAGCACATCCAGGCTAAGAGGGCCAGAGTAGAGACCATTGTCCGAGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 90 bp | ATAGCACTTGCTGTAATACGGAGTCCACAGCTTGGGACACGGCCCTaGTCAGTTCTTTCCTCAGAGTCTCCACCAAGGCCCGTGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IALAVIRSPQLGTRP*SVLSSESPPRPVGQ Trigger: CTGGCCCACGGGCCTTGGTGGAGACTCTGAGGAAAGAACTGAGCAGGGCCGTGTCCCAAGCTGTGGACTCCGTATTACAGCAAGTGCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 90 bp | GGAAAAGCTCCGAGTCTCGGAGGACAGCCAGTGCTTGGGCGTTCGTaGTACCGTCTGAAAGTGCTTGCCGGGCATACTTTTCCATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKAPSLGGQPVLGRS*YRLKVLAGHTFPSG Trigger: TCCAGATGGAAAAGTATGCCCGGCAAGCACTTTCAGACGGTATCACGAACGCCCAAGCACTGGCTGTCCTCCGAGACTCGGAGCTTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 90 bp | AGACACATGCCTCGGACAATGGTCTCTACTCTGGCCCTCTTAGCCTaGATGTGCTCGTCCCAAAACCAGTCAGCTTCAGTGAGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHMPRTMVSTLALLA*MCSSQNQSASVRLE Trigger: CTCCAGCCTCACTGAAGCTGACTGGTTTTGGGACGAGCACATCCAGGCTAAGAGGGCCAGAGTAGAGACCATTGTCCGAGGCATGTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 90 bp | GTGTTGAATTGCCCAAGGGAACCCCAGCTTGTGGCTGGATCTTTCTaGGCAGGGTGGCAAGAGCAAGTGGGTCCTTATAGGCACTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLNCPREPQLVAGSF*AGWQEQVGPYRHFS Trigger: GGAGAAGTGCCTATAAGGACCCACTTGCTCTTGCCACCCTGCCCAGAAAGATCCAGCCACAAGCTGGGGTTCCCTTGGGCAATTCAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | CCTGCCTCCACCTCTCACCTTGGACTCCCAGGCCTGTGCCATCATACTTGCCCTAAGTTGCTGAACCACTaGATCATCTGGGAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PASTSHLGLPGLCHHTCPKLLNH*IIWEVM Trigger: CATCACCTCCCAGATGATCAAGTGGTTCAGCAACTT...AGGGCAAGTATGATGGCACAGGCCTGGGAGTCCAAGGTGAGAGGTGGAGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 90 bp | CTTCGCTCCTGCTGCGTGAGATGTCTCTGTGGATCAAATAGCACTTaGTGTAATACGGAGTCCACAGCTTGGGACACGGCCCTGCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRSCCVRCLCGSNST*CNTESTAWDTALLS Trigger: ACTGAGCAGGGCCGTGTCCCAAGCTGTGGACTCCGTATTACAGCAAGTGCTATTTGATCCACAGAGACATCTCACGCAGCAGGAGCGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 90 bp | TTGAGAACTCGGAAAAGCTCCGAGTCTCGGAGGACAGCCAGTGCTTaGGCGTTCGTGATACCGTCTGAAAGTGCTTGCCGGGCATACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRTRKSSESRRTASA*AFVIPSESACRAYF Trigger: AAAGTATGCCCGGCAAGCACTTTCAGACGGTATCACGAACGCCCAAGCACTGGCTGTCCTCCGAGACTCGGAGCTTTTCCGAGTTCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 90 bp | TGGTTTCTGCCCTCTGATGCTAGCCCCTGGCAGCTTCGCTCCTGCTaGGTGAGATGTCTCTGTGGATCAAATAGCACTTGCTGTAATACG | + |
|
Preference number: 5 (lower is better) Translates to: WFLPSDASPWQLRSC*VRCLCGSNSTCCNT Trigger: CGTATTACAGCAAGTGCTATTTGATCCACAGAGACATCTCACGCAGCAGGAGCGAAGCTGCCAGGGGCTAGCATCAGAGGGCAGAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | GTGACTACAGCTAAACTGCCATTTATGACAAAGCTTGAGCCACCCTGGGCCGTTCAAGGGAACCCCAGCTaGTGGCTGGATCTTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTTAKLPFMTKLEPPWAVQGNPS*WLDLSG Trigger: CCCAGAAAGATCCAGCCACAAGCTGGGGTTCCCTTG...AACGGCCCAGGGTGGCTCAAGCTTTGTCATAAATGGCAGTTTAGCTGTAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 90 bp | CTCCATTGGCCATCGGGCCCACGACCCAGAAGCTGCCTAAGCATCTaGTTTTCCCAGGTGTGGGAAGGTACATTTGTCAAGGGACAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LHWPSGPRPRSCLSI*FSQVWEGTFVKGQF Trigger: AAATTGTCCCTTGACAAATGTACCTTCCCACACCTGGGAAAATCAGATGCTTAGGCAGCTTCTGGGTCGTGGGCCCGATGGCCAATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 90 bp | CTCTGTGGATCAAATAGCACTTGCTGTAATACGGAGTCCACAGCTTaGGACACGGCCCTGCTCAGTTCTTTCCTCAGAGTCTCCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LCGSNSTCCNTESTA*DTALLSSFLRVSTK Trigger: CTTGGTGGAGACTCTGAGGAAAGAACTGAGCAGGGCCGTGTCCCAAGCTGTGGACTCCGTATTACAGCAAGTGCTATTTGATCCACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | AAACCTGTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAACCCTCGGGGAGCTTCTaGGCTCAGTTCCTCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPVYHHHLAMNLLPELKEPSGSF*AQFLLG Trigger: GCCCAGGAGGAACTGAGCCAAGAAGCTCCCCGAGGG...TTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 90 bp | CATCAGGGAAATAAGCTTTCAGGAGGCTGGAGCTGGGGTACCGCGTaGAGAAAAACATTAGTTTGGCCTTCTTCAGGTGACCAGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HQGNKLSGGWSWGTA*RKTLVWPSSGDQGS Trigger: TGAGCCCTGGTCACCTGAAGAAGGCCAAACTAATGTTTTTCTTCACGCGGTACCCCAGCTCCAGCCTCCTGAAAGCTTATTTCCCTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 90 bp | CGAGTCTCGGAGGACAGCCAGTGCTTGGGCGTTCGTGATACCGTCTaGAAGTGCTTGCCGGGCATACTTTTCCATCTGGATGTAATAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RVSEDSQCLGVRDTV*KCLPGILFHLDVIK Trigger: TTTTATTACATCCAGATGGAAAAGTATGCCCGGCAAGCACTTTCAGACGGTATCACGAACGCCCAAGCACTGGCTGTCCTCCGAGACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTTACGGAGTCCACAGCTaGGGACACGGCCCTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HHHLAMNLLPELKEYQEIYGVHS*GHGPAQ Trigger: CTGAGCAGGGCCGTGTCCCAAGCTGTGGACTCCGTA...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | AAACCTGTTTACCACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACGGAGTCCACAGCTaGGGACACGGCCCTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPVYHHHLAMNLLPELKEYGVHS*GHGPAQ Trigger: CTGAGCAGGGCCGTGTCCCAAGCTGTGGACTCCGTA...TTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTGGTAAACAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | CAGATCCACCTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACGAGAATCTAGAGGCCTaGCCAGTGTTGAATTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QIHLSLPLRAGIKPVYHHENLEA*PVLNCP Trigger: TGGGCAATTCAACACTGGCAAGGCCTCTAGATTCTC...GTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAGGTGGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | CTATCTCTGCCTCTCCGTGCAGGGATTAAACCTGTTTACCACCACCACTTGGCTGAGAATCTAGAGGCCTaGCCAGTGTTGAATTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSLPLRAGIKPVYHHHLAENLEA*PVLNCP Trigger: TGGGCAATTCAACACTGGCAAGGCCTCTAGATTCTC...AGCCAAGTGGTGGTGGTAAACAGGTTTAATCCCTGCACGGAGAGGCAGAGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | GTGTTCCAGCAGACAGATGCAAGCCACAGCAGTGCCGACCGAGGTTCTTTAGGATTGTCAAGGGACAATTaGGTAGGGGACTCTGATATG | + |
|
Preference number: 5 (lower is better) Translates to: VFQQTDASHSSADRGSLGLSRDN*VGDSDM Trigger: CATATCAGAGTCCCCTACCAAATTGTCCCTTGACAA...TCCTAAAGAACCTCGGTCGGCACTGCTGTGGCTTGCATCTGTCTGCTGGAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177289.9 |
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| CDS TCA 90 bp | GTGTGGGAAGGTACATTTGTCAAGGGACAATTTGGTAGGGGACTCTaGTATGATCTAGGGACTCCTCTTGGAGAGACAGGACACATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VWEGTFVKGQFGRGL*YDLGTPLGETGHIG Trigger: TCCTATGTGTCCTGTCTCTCCAAGAGGAGTCCCTAGATCATATCAGAGTCCCCTACCAAATTGTCCCTTGACAAATGTACCTTCCCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | CACCACCACTTGGCTATGAATCTCCTTCCAGAGTTAAAGGAATACCAGGAAATTTTGTCAAGGGACAATTaGGTAGGGGACTCTGATATG | + |
|
Preference number: 5 (lower is better) Translates to: HHHLAMNLLPELKEYQEILSRDN*VGDSDM Trigger: CATATCAGAGTCCCCTACCAAATTGTCCCTTGACAA...AATTTCCTGGTATTCCTTTAACTCTGGAAGGAGATTCATAGCCAAGTGGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS-3UTR CAA 90 bp | GTTAAGTCTCTGATAATTCTGGACAAGAAAACGAGTATTCAGAACGGCAGTTGCAAGTTGCTGAACCACTaGATCATCTGGGAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VKSLIILDKKTSIQNGSCKLLNH*IIWEVM Trigger: CATCACCTCCCAGATGATCAAGTGGTTCAGCAACTT...GCAACTGCCGTTCTGAATACTCGTTTTCTTGTCCAGAATTATCAGAGACTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 72 bp | CTGGTGAGGCTCGTTCTCCACGGTCCAGGCACCAGATaGGCAGCTGTTCCTCGGCCTTGCCCTCGGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVRLVLHGPGTR*AAVPRPCPRGA Trigger: AGCTCCCCGAGGGCAAGGCCGAGGAACAGCTGCTCATCTGGTGCCTGGACCGTGGAGAACGAGCCTCACCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | TGGAAAGCTGCGTCCTGGGGAGGGCTGCCACTCCATTaGCCATCGGGCCCACGACCCAGAAGCTGCCTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: WKAASWGGLPLH*PSGPRPRSCLS Trigger: GCTTAGGCAGCTTCTGGGTCGTGGGCCCGATGGCCAATGGAGTGGCAGCCCTCCCCAGGACGCAGCTTTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | CTGCTGGCTCAGCCCCCACGGTTGCTGGGCAGACTCTaGGGAGGTATGACTTTGGAAAGCTGCGTCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLAQPPRLLGRL*GGMTLESCVLG Trigger: CCCCAGGACGCAGCTTTCCAAAGTCATACCTCCCCAGAGTCTGCCCAGCAACCGTGGGGGCTGAGCCAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CAA 72 bp | CGGTCCAGGCACCAGATGAGCAGCTGTTCCTCGGCCTaGCCCTCGGGGAGCTTCTTGGCTCAGTTCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSRHQMSSCSSA*PSGSFLAQFLL Trigger: CAGGAGGAACTGAGCCAAGAAGCTCCCCGAGGGCAAGGCCGAGGAACAGCTGCTCATCTGGTGCCTGGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CAA 72 bp | TTGGAAAGCTGCGTCCTGGGGAGGGCTGCCACTCCATaGGCCATCGGGCCCACGACCCAGAAGCTGCCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LESCVLGRAATP*AIGPTTQKLPK Trigger: CTTAGGCAGCTTCTGGGTCGTGGGCCCGATGGCCAATGGAGTGGCAGCCCTCCCCAGGACGCAGCTTTCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CAA 90 bp | CACCAGATGAGCAGCTGTTCCTCGGCCTTGCCCTCGGGGAGCTTCTaGGCTCAGTTCCTCCTGGGCTCTGTGCTGGTGCTCTGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HQMSSCSSALPSGSF*AQFLLGSVLVLWAL Trigger: CAGAGCCCAGAGCACCAGCACAGAGCCCAGGAGGAACTGAGCCAAGAAGCTCCCCGAGGGCAAGGCCGAGGAACAGCTGCTCATCTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CAA 90 bp | CGTTCTCCACGGTCCAGGCACCAGATGAGCAGCTGTTCCTCGGCCTaGCCCTCGGGGAGCTTCTTGGCTCAGTTCCTCCTGGGCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSPRSRHQMSSCSSA*PSGSFLAQFLLGSV Trigger: CACAGAGCCCAGGAGGAACTGAGCCAAGAAGCTCCCCGAGGGCAAGGCCGAGGAACAGCTGCTCATCTGGTGCCTGGACCGTGGAGAACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | CAGCTGACCACTGGGAAACGAGTCTCTGCCTGCCTCTaGGGTGGCTGGGCTTCTCTCCTGGTCCATGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QLTTGKRVSACL*GGWASLLVHAG Trigger: ACCTGCATGGACCAGGAGAGAAGCCCAGCCACCGCAGAGGCAGGCAGAGACTCGTTTCCCAGTGGTCAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | TCTCTGCCTGCCTCTGCGGTGGCTGGGCTTCTCTCCTaGTCCATGCAGGTTTCTTCTGCCAGGTGGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLPASAVAGLLS*SMQVSSARWVQ Trigger: CTGCACCCACCTGGCAGAAGAAACCTGCATGGACCAGGAGAGAAGCCCAGCCACCGCAGAGGCAGGCAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CAA 72 bp | CCACGGTTGCTGGGCAGACTCTGGGGAGGTATGACTTaGGAAAGCTGCGTCCTGGGGAGGGCTGCCACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PRLLGRLWGGMT*ESCVLGRAATP Trigger: TGGAGTGGCAGCCCTCCCCAGGACGCAGCTTTCCAAAGTCATACCTCCCCAGAGTCTGCCCAGCAACCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CAA 90 bp | CTTCTTGGGCCCTCGCTCCCAGGCAGGGCTAGATTTCAGGGGACCTaGGTGCATGGGAAGGCTCTGCTTTCTCTTCCGCTCCCGACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLGPSLPGRARFQGT*VHGKALLSLPLPTL Trigger: AAGGGTCGGGAGCGGAAGAGAAAGCAGAGCCTTCCCATGCACCAAGGTCCCCTGAAATCTAGCCCTGCCTGGGAGCGAGGGCCCAAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 72 bp | AACCAGTCAGCTTCAGTGAGGCTGGAGCTGGGCAGCTaGCCACTGGGAAACGAGTCTCTGCCTGCCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: NQSASVRLELGS*PLGNESLPASA Trigger: CGCAGAGGCAGGCAGAGACTCGTTTCCCAGTGGTCAGCTGCCCAGCTCCAGCCTCACTGAAGCTGACTGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | GGCTGGGCTTCTCTCCTGGTCCATGCAGGTTTCTTCTaGCAGGTGGGTGCAGGTCCGAGACTGAGGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GWASLLVHAGFF*QVGAGPRLRRK Trigger: CTTCCTCCTCAGTCTCGGACCTGCACCCACCTGGCAGAAGAAACCTGCATGGACCAGGAGAGAAGCCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | AGGTATGACTTTGGAAAGCTGCGTCCTGGGGAGGGCTaGCACTCCATTGGCCATCGGGCCCACGACCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RYDFGKLRPGEG*HSIGHRAHDPE Trigger: TTCTGGGTCGTGGGCCCGATGGCCAATGGAGTGGCAGCCCTCCCCAGGACGCAGCTTTCCAAAGTCATACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | CTGGGCAGACTCTGGGGAGGTATGACTTTGGAAAGCTaGGTCCTGGGGAGGGCTGCCACTCCATTGGCCATC | + |
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Preference number: 6 (lower is better) Translates to: LGRLWGGMTLES*VLGRAATPLAI Trigger: GATGGCCAATGGAGTGGCAGCCCTCCCCAGGACGCAGCTTTCCAAAGTCATACCTCCCCAGAGTCTGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | ACTGGGAAACGAGTCTCTGCCTGCCTCTGCGGTGGCTaGGCTTCTCTCCTGGTCCATGCAGGTTTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TGKRVSACLCGG*ASLLVHAGFFC Trigger: GCAGAAGAAACCTGCATGGACCAGGAGAGAAGCCCAGCCACCGCAGAGGCAGGCAGAGACTCGTTTCCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | GGTGAAGGCTGGTTTCTGCCCTCTGATGCTAGCCCCTaGCAGCTTCGCTCCTGCTGCGTGAGATGTCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: GEGWFLPSDASP*QLRSCCVRCLC Trigger: ACAGAGACATCTCACGCAGCAGGAGCGAAGCTGCCAGGGGCTAGCATCAGAGGGCAGAAACCAGCCTTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | CGGAAAAGCTCCGAGTCTCGGAGGACAGCCAGTGCTTaGGCGTTCGTGATACCGTCTGAAAGTGCTTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: RKSSESRRTASA*AFVIPSESACR Trigger: CCGGCAAGCACTTTCAGACGGTATCACGAACGCCCAAGCACTGGCTGTCCTCCGAGACTCGGAGCTTTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CAA 90 bp | GGTATGACTTTGGAAAGCTGCGTCCTGGGGAGGGCTGCCACTCCATaGGCCATCGGGCCCACGACCCAGAAGCTGCCTAAGCATCTGATT | + |
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Preference number: 6 (lower is better) Translates to: GMTLESCVLGRAATP*AIGPTTQKLPKHLI Trigger: AATCAGATGCTTAGGCAGCTTCTGGGTCGTGGGCCCGATGGCCAATGGAGTGGCAGCCCTCCCCAGGACGCAGCTTTCCAAAGTCATACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | TCTCCTGGTCCATGCAGGTTTCTTCTGCCAGGTGGGTaGAGGTCCGAGACTGAGGAGGAAGCAAGACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SPGPCRFLLPGG*RSETEEEARQQ Trigger: CTGCTGTCTTGCTTCCTCCTCAGTCTCGGACCTGCACCCACCTGGCAGAAGAAACCTGCATGGACCAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | GCTGTAATACGGAGTCCACAGCTTGGGACACGGCCCTaGTCAGTTCTTTCCTCAGAGTCTCCACCAAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AVIRSPQLGTRP*SVLSSESPPRP Trigger: GGGCCTTGGTGGAGACTCTGAGGAAAGAACTGAGCAGGGCCGTGTCCCAAGCTGTGGACTCCGTATTACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | TGCCCAAGGGAACCCCAGCTTGTGGCTGGATCTTTCTaGGCAGGGTGGCAAGAGCAAGTGGGTCCTTATAGG | + |
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Preference number: 6 (lower is better) Translates to: CPREPQLVAGSF*AGWQEQVGPYR Trigger: CCTATAAGGACCCACTTGCTCTTGCCACCCTGCCCAGAAAGATCCAGCCACAAGCTGGGGTTCCCTTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 72 bp | CCGAGTCTCGGAGGACAGCCAGTGCTTGGGCGTTCGTaGTACCGTCTGAAAGTGCTTGCCGGGCATACTTTT | + |
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Preference number: 6 (lower is better) Translates to: PSLGGQPVLGRS*YRLKVLAGHTF Trigger: AAAAGTATGCCCGGCAAGCACTTTCAGACGGTATCACGAACGCCCAAGCACTGGCTGTCCTCCGAGACTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | CCCTCTGATGCTAGCCCCTGGCAGCTTCGCTCCTGCTaGGTGAGATGTCTCTGTGGATCAAATAGCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: PSDASPWQLRSC*VRCLCGSNSTC Trigger: GCAAGTGCTATTTGATCCACAGAGACATCTCACGCAGCAGGAGCGAAGCTGCCAGGGGCTAGCATCAGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | CTGCCCTCTGATGCTAGCCCCTGGCAGCTTCGCTCCTaGTGCGTGAGATGTCTCTGTGGATCAAATAGCACT | + |
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Preference number: 6 (lower is better) Translates to: LPSDASPWQLRS*CVRCLCGSNST Trigger: AGTGCTATTTGATCCACAGAGACATCTCACGCAGCAGGAGCGAAGCTGCCAGGGGCTAGCATCAGAGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | GAACCCCAGCTTGTGGCTGGATCTTTCTGGGCAGGGTaGCAAGAGCAAGTGGGTCCTTATAGGCACTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: EPQLVAGSFWAG*QEQVGPYRHFS Trigger: GGAGAAGTGCCTATAAGGACCCACTTGCTCTTGCCACCCTGCCCAGAAAGATCCAGCCACAAGCTGGGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | AGTGTTGAATTGCCCAAGGGAACCCCAGCTTGTGGCTaGATCTTTCTGGGCAGGGTGGCAAGAGCAAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SVELPKGTPACG*IFLGRVARASG Trigger: CCCACTTGCTCTTGCCACCCTGCCCAGAAAGATCCAGCCACAAGCTGGGGTTCCCTTGGGCAATTCAACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 72 bp | TTTACTGCTCCACAGAGGTCCTTGCTAGAACTCTGGTaGGGCTCGTTCTCCACGGTCCAGGCACCAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: FTAPQRSLLELW*GSFSTVQAPDE Trigger: CTCATCTGGTGCCTGGACCGTGGAGAACGAGCCTCACCAGAGTTCTAGCAAGGACCTCTGTGGAGCAGTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | CCTCGGACAATGGTCTCTACTCTGGCCCTCTTAGCCTaGATGTGCTCGTCCCAAAACCAGTCAGCTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: PRTMVSTLALLA*MCSSQNQSASV Trigger: CACTGAAGCTGACTGGTTTTGGGACGAGCACATCCAGGCTAAGAGGGCCAGAGTAGAGACCATTGTCCGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CAA 90 bp | GAGACAGGACACATAGGAGAATCTAGAGGCCTTGCCAGTGTTGAATaGCCCAAGGGAACCCCAGCTTGTGGCTGGATCTTTCTGGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ETGHIGESRGLASVE*PKGTPACGWIFLGR Trigger: CCTGCCCAGAAAGATCCAGCCACAAGCTGGGGTTCCCTTGGGCAATTCAACACTGGCAAGGCCTCTAGATTCTCCTATGTGTCCTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 72 bp | GAGGACAGCCAGTGCTTGGGCGTTCGTGATACCGTCTaGAAGTGCTTGCCGGGCATACTTTTCCATCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: EDSQCLGVRDTV*KCLPGILFHLD Trigger: ATCCAGATGGAAAAGTATGCCCGGCAAGCACTTTCAGACGGTATCACGAACGCCCAAGCACTGGCTGTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | ACAATGGTCTCTACTCTGGCCCTCTTAGCCTGGATGTaGTCGTCCCAAAACCAGTCAGCTTCAGTGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TMVSTLALLAWM*SSQNQSASVRL Trigger: CAGCCTCACTGAAGCTGACTGGTTTTGGGACGAGCACATCCAGGCTAAGAGGGCCAGAGTAGAGACCATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS TCA 72 bp | AGGAAGGATCTGAATCTTTCCCTGCCAAGACAGCCCTaGAGAACTCCTTCAGTGTCAGGGCGGCAATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RKDLNLSLPRQP*RTPSVSGRQSP Trigger: TGGAGATTGCCGCCCTGACACTGAAGGAGTTCTTCAGGGCTGTCTTGGCAGGGAAAGATTCAGATCCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | TGTGCTGGTGCTCTGGGCTCTGTGGCCTGTAGGACATaGTCCTGCAAATGTCTTAGCTGTTGCTTCAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: CAGALGSVACRT*SCKCLSCCFSR Trigger: TCTACTGAAGCAACAGCTAAGACATTTGCAGGAGCATGTCCTACAGGCCACAGAGCCCAGAGCACCAGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS GCA 72 bp | TGCTGCGTGAGATGTCTCTGTGGATCAAATAGCACTTaGTGTAATACGGAGTCCACAGCTTGGGACACGGCC | + |
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Preference number: 6 (lower is better) Translates to: CCVRCLCGSNST*CNTESTAWDTA Trigger: GGCCGTGTCCCAAGCTGTGGACTCCGTATTACAGCAAGTGCTATTTGATCCACAGAGACATCTCACGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CAA 72 bp | CACATAGGAGAATCTAGAGGCCTTGCCAGTGTTGAATaGCCCAAGGGAACCCCAGCTTGTGGCTGGATCTTT | + |
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Preference number: 6 (lower is better) Translates to: HIGESRGLASVE*PKGTPACGWIF Trigger: AAAGATCCAGCCACAAGCTGGGGTTCCCTTGGGCAATTCAACACTGGCAAGGCCTCTAGATTCTCCTATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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| CDS CCA 72 bp | CTTCAGTGTCAGGGCGGCAATCTCCAAGAAGCAGTCTaGGACCTCAAAGTCATTCCCCTTGTTATAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LQCQGGNLQEAV*DLKVIPLVIVC Trigger: ACACACTATAACAAGGGGAATGACTTTGAGGTCCCAGACTGCTTCTTGGAGATTGCCGCCCTGACACTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110249.3 ENSMUST00000177289.9 |
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