Pregenerated sensors for PROSER2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045319Ensembl transcript IDs: ENSMUST00000054254.12, ENSMUST00000114942.9, ENSMUST00000126551.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACACACCAGGTAGGGGGCGGAGGTGGGAGAGAAGAGGCAAGAACTaGGAACGGAAGCAGATATTTCCCTCTGGGGATTGCAAGGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: HTPGRGRRWERRGKN*ERKQIFPSGDCKVG Trigger: CCCTACCTTGCAATCCCCAGAGGGAAATATCTGCTTCCGTTCTCAGTTCTTGCCTCTTCTCTCCCACCTCCGCCCCCTACCTGGTGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR GCA 90 bp | GTGGCCACAACTCTGTCAGACAGAATCTGGAAGAAAACTTCATGCTaGACAACTGAGTTCCGTGAGCTCCTTCAAATCACTTCAAATCAC | + |
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Preference number: 1 (lower is better) Translates to: VATTLSDRIWKKTSC*TTEFRELLQITSNH Trigger: GTGATTTGAAGTGATTTGAAGGAGCTCACGGAACTCAGTTGTGCAGCATGAAGTTTTCTTCCAGATTCTGTCTGACAGAGTTGTGGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR GCA 90 bp | ATGGCTTCAGGAGAACGAGAGAGAGCTGAGCCAGTTGATAGACTTTaGTCCAAAGAAATAAAACCCACTCATTCCCTGTATGTAACCTAC | + |
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Preference number: 1 (lower is better) Translates to: MASGERERAEPVDRL*SKEIKPTHSLYVTY Trigger: GTAGGTTACATACAGGGAATGAGTGGGTTTTATTTCTTTGGAGCAAAGTCTATCAACTGGCTCAGCTCTCTCTCGTTCTCCTGAAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR TCA 90 bp | CTGAGTTCCGTGAGCTCCTTCAAATCACTTCAAATCACACTGCTCTaGGAGCATAGCCTAGCAGATCATTTCCTTTTGTTTTCTAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: LSSVSSFKSLQITLL*EHSLADHFLLFSSY Trigger: GTAGCTAGAAAACAAAAGGAAATGATCTGCTAGGCTATGCTCTCAGAGCAGTGTGATTTGAAGTGATTTGAAGGAGCTCACGGAACTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR TCA 90 bp | TGGTTTTGTTTTGAATTGATACTAAGGTTTCCATCAAGCTCCTTATaGAAGCTAGCTCTGAATGTGGTCCTGCTCCCTGATAGCTGCATG | + |
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Preference number: 1 (lower is better) Translates to: WFCFELILRFPSSSL*KLALNVVLLPDSCM Trigger: CATGCAGCTATCAGGGAGCAGGACCACATTCAGAGCTAGCTTTCATAAGGAGCTTGATGGAAACCTTAGTATCAATTCAAAACAAAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR GCA 90 bp | AGCATGGCCAGTGGGCAGCATCCTTCCCCCTCTCCTCAAGCAACCTTACAAGAGCTCTGCTACAGTGCGTaGTGGAAGGCCCAGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SMASGQHPSPSPQATLQELCYSA*WKAQQA Trigger: TGCCTGCTGGGCCTTCCAGCACGCACTGTAGCAGAG...CTCTTGTAAGGTTGCTTGAGGAGAGGGGGAAGGATGCTGCCCACTGGCCATGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGAGAGGGAATCCTGAGTATCAGAGTCTGGACCAAGTCGCAGTCATGGAGGCGCTGCACTGGGATTaGGGCAGAAGCTTCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: KRRGNPEYQSLDQVAVMEALHWD*GRSFSP Trigger: GGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGC...CTCCATGACTGCGACTTGGTCCAGACTCTGATACTCAGGATTCCCTCTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| 3UTR-3UTR TCA 90 bp | CACCTGAAGAGACCGGGAACCTCAGGTCCACCTTTCCTTTTCATTTCAATCTTGGAGGAGAGGGAATCCTaGGTATCAGAGTCTGGACCA | + |
|
Preference number: 2 (lower is better) Translates to: HLKRPGTSGPPFLFISILEERES*VSESGP Trigger: TGGTCCAGACTCTGATACTCAGGATTCCCTCTCCTC...CAAGATTGAAATGAAAAGGAAAGGTGGACCTGAGGTTCCCGGTCTCTTCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAACTTCATGCTGCACAACTGAGTTCCGTGAGCTCCTTCAAATCACTTCAGCGCTGCACTGGGATTaGGGCAGAAGCTTCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: KKTSCCTTEFRELLQITSALHWD*GRSFSP Trigger: GGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGC...TGAAGTGATTTGAAGGAGCTCACGGAACTCAGTTGTGCAGCATGAAGTTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCCCATAATCAAAGCCCTGGGAATTTGGGAAAAACACACTTGTTGGTTTGAAGGGTGTGGCTCTTaGGCCAGCCCTTCCCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: RSPIIKALGIWEKHTCWFEGCGS*ASPSLA Trigger: AGCTAGGGAAGGGCTGGCCCAAGAGCCACACCCTTC...AAACCAACAAGTGTGTTTTTCCCAAATTCCCAGGGCTTTGATTATGGGGGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGTTATTAAGCAAACACTGTGTATGGCATCTTACTTTGTCAAAGGGACCTGACTCCGCGCTGCACTaGGATTGGGGCAGAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LQLLSKHCVWHLTLSKGPDSALH*DWGRSF Trigger: GAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTC...AGGTCCCTTTGACAAAGTAAGATGCCATACACAGTGTTTGCTTAATAACTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR GCA 90 bp | CACCTGAAGAGACCGGGAACCTCAGGTCCACCTTTCCTTTTCATTTCAATCTTGGCCATGTCACATAACTaGAACACAGAAACTAATGCT | + |
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Preference number: 2 (lower is better) Translates to: HLKRPGTSGPPFLFISILAMSHN*NTETNA Trigger: AGCATTAGTTTCTGTGTTGCAGTTATGTGACATGGC...CAAGATTGAAATGAAAAGGAAAGGTGGACCTGAGGTTCCCGGTCTCTTCAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR CCA 90 bp | AATGTGTCCTTCAACAGCTCATTAGAAGTCGGAGTCTCAGTAAGACTCACGGGATGGATAATAACACTGTaGCCACAACTCTGTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: NVSFNSSLEVGVSVRLTGWIITL*PQLCQT Trigger: TGTCTGACAGAGTTGTGGCCACAGTGTTATTATCCA...TCCCGTGAGTCTTACTGAGACTCCGACTTCTAATGAGCTGTTGAAGGACACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR TCA 90 bp | TTTAAAATGTTTGAGATGGCTTCAGGAGAACGAGAGAGAGCTGAGCCAGTTGATACAGAGCTAGTGAGGTaGCAAAGATTCAAACTTTCC | + |
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Preference number: 2 (lower is better) Translates to: FKMFEMASGERERAEPVDTELVR*QRFKLS Trigger: GGAAAGTTTGAATCTTTGTCACCTCACTAGCTCTGT...ATCAACTGGCTCAGCTCTCTCTCGTTCTCCTGAAGCCATCTCAAACATTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR GCA 90 bp | TTTAAAATGTTTGAGATGGCTTCAGGAGAACGAGAGAGAGCTGAGCCAGTTGATAAGAAAACTTCATGCTaGACAACTGAGTTCCGTGAG | + |
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Preference number: 2 (lower is better) Translates to: FKMFEMASGERERAEPVDKKTSC*TTEFRE Trigger: CTCACGGAACTCAGTTGTGCAGCATGAAGTTTTCTT...ATCAACTGGCTCAGCTCTCTCTCGTTCTCCTGAAGCCATCTCAAACATTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCCCATAATCAAAGCCCTGGGAATTTGGGAAAAACACACTTGTTGGTTTTTGTTGTTGGTGGTGTaGTTTTCTGACTTCTACGTA | + |
|
Preference number: 2 (lower is better) Translates to: RSPIIKALGIWEKHTCWFLLLVV*FSDFYV Trigger: TACGTAGAAGTCAGAAAACCACACCACCAACAACAA...AAACCAACAAGTGTGTTTTTCCCAAATTCCCAGGGCTTTGATTATGGGGGATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR GCA 90 bp | AGATCCCCCATAATCAAAGCCCTGGGAATTTGGGAAAAACACACTTGTTGGTTTGAAATCAGGAAATGTTaGTTTAATTGGGAACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: RSPIIKALGIWEKHTCWFEIRKC*FNWEQS Trigger: GCTCTGTTCCCAATTAAAGCAACATTTCCTGATTTC...AAACCAACAAGTGTGTTTTTCCCAAATTCCCAGGGCTTTGATTATGGGGGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR CCA 90 bp | AGATCCCCCATAATCAAAGCCCTGGGAATTTGGGAAAAACACACTTGTTGGTTTTTAAAATGTTTGAGATaGCTTCAGGAGAACGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RSPIIKALGIWEKHTCWFLKCLR*LQENER Trigger: TCTCTCGTTCTCCTGAAGCCATCTCAAACATTTTAA...AAACCAACAAGTGTGTTTTTCCCAAATTCCCAGGGCTTTGATTATGGGGGATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCAGTTATTAAGCAAACACTGTGTATGGCATCTTACTTTGTCAAAGGGACCTAAATGTTGCTTTAATTaGGAACAGAGCATACTGTAC | + |
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Preference number: 2 (lower is better) Translates to: LQLLSKHCVWHLTLSKGPKCCFN*EQSILY Trigger: GTACAGTATGCTCTGTTCCCAATTAAAGCAACATTT...AGGTCCCTTTGACAAAGTAAGATGCCATACACAGTGTTTGCTTAATAACTGAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR GCA 72 bp | CGCTGTCCTTGCCCTGCAGGTCTCTTGACTCCGCGCTaGACTGGGATTGGGGCAGAAGCTTCTCTCCCGACA | + |
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Preference number: 3 (lower is better) Translates to: RCPCPAGLLTPR*TGIGAEASLPT Trigger: TGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGGCAAGGACAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| 3UTR CCA 72 bp | CCCTGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTaGGGCAGAAGCTTCTCTCCCGACAAGCAGCACTTC | + |
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Preference number: 3 (lower is better) Translates to: PCRSLDSALHWD*GRSFSPDKQHF Trigger: GAAGTGCTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| 3UTR CCA 72 bp | TCCTTGCCCTGCAGGTCTCTTGACTCCGCGCTGCACTaGGATTGGGGCAGAAGCTTCTCTCCCGACAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SLPCRSLDSALH*DWGRSFSPDKQ Trigger: CTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGGCAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| 3UTR CCA 72 bp | CACGGGAAAACCAATGGGCTCTGCTACAGTGCGTGCTaGAAGGCCCAGCAGGCAGAAGGGTGTGGCTCTTGG | + |
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Preference number: 3 (lower is better) Translates to: HGKTNGLCYSAC*KAQQAEGCGSW Trigger: CCAAGAGCCACACCCTTCTGCCTGCTGGGCCTTCCAGCACGCACTGTAGCAGAGCCCATTGGTTTTCCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR CCA 72 bp | CACGATCAGTCTCAGTGCATAGCAGAGGCCCCAGCATaGCCAGTGGGCAGCATCCTTCCCCCTCTCCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: HDQSQCIAEAPA*PVGSILPPLLK Trigger: CTTGAGGAGAGGGGGAAGGATGCTGCCCACTGGCCATGCTGGGGCCTCTGCTATGCACTGAGACTGATCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR GCA 72 bp | ACTCACGGGAAAACCAATGGGCTCTGCTACAGTGCGTaGTGGAAGGCCCAGCAGGCAGAAGGGTGTGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: THGKTNGLCYSA*WKAQQAEGCGS Trigger: AGAGCCACACCCTTCTGCCTGCTGGGCCTTCCAGCACGCACTGTAGCAGAGCCCATTGGTTTTCCCGTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR GCA 72 bp | AGTCTCAGTAAGACTCACGGGAAAACCAATGGGCTCTaGTACAGTGCGTGCTGGAAGGCCCAGCAGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SLSKTHGKTNGL*YSACWKAQQAE Trigger: TTCTGCCTGCTGGGCCTTCCAGCACGCACTGTAGCAGAGCCCATTGGTTTTCCCGTGAGTCTTACTGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR CCA 72 bp | ATCCTGAGTATCAGAGTCTGGACCAAGTCGCAGTCATaGAGGCCCAGAGGTCCTAATTCCAAGACCCCGGAA | + |
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Preference number: 3 (lower is better) Translates to: ILSIRVWTKSQS*RPRGPNSKTPE Trigger: TTCCGGGGTCTTGGAATTAGGACCTCTGGGCCTCCATGACTGCGACTTGGTCCAGACTCTGATACTCAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| 3UTR-3UTR CAA 90 bp | GCATCCTTCCCCCTCTCCTCAAGCAACCTTACAAGAGCGTGTAACCTCAGTGAGGTATGGCATCTTACTTaGTCAAAGGGACCTCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: ASFPLSSSNLTRACNLSEVWHLT*SKGPPG Trigger: GCCAGGAGGTCCCTTTGACAAAGTAAGATGCCATAC...CTCACTGAGGTTACACGCTCTTGTAAGGTTGCTTGAGGAGAGGGGGAAGGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR CCA 72 bp | AGGCAAGAACTGAGAACGGAAGCAGATATTTCCCTCTaGGGATTGCAAGGTAGGGCTTTGGCTTGCAGGACT | + |
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Preference number: 3 (lower is better) Translates to: RQELRTEADISL*GLQGRALACRT Trigger: AGTCCTGCAAGCCAAAGCCCTACCTTGCAATCCCCAGAGGGAAATATCTGCTTCCGTTCTCAGTTCTTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR CAA 90 bp | CTTCAGTTATTAAGCAAACACTGTGTATGGCATCTTACTTTGTCAAAGGGACCTCGCGCTGCACTGGGATaGGGGCAGAAGCTTCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LQLLSKHCVWHLTLSKGPRAALG*GQKLLS Trigger: GGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCG...AGGTCCCTTTGACAAAGTAAGATGCCATACACAGTGTTTGCTTAATAACTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR-3UTR CAA 90 bp | AGCATGGCCAGTGGGCAGCATCCTTCCCCCTCTCCTCAAGCAACCTTACAAGAGAAATTGTTGTTGTTGTaGTTGGTGGTGTGGTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: SMASGQHPSPSPQATLQEKLLLL*LVVWFS Trigger: AGAAAACCACACCACCAACAACAACAACAACAATTT...CTCTTGTAAGGTTGCTTGAGGAGAGGGGGAAGGATGCTGCCCACTGGCCATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR GCA 72 bp | GGAGAACGAGAGAGAGCTGAGCCAGTTGATAGACTTTaGTCCAAAGAAATAAAACCCACTCATTCCCTGTAT | + |
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Preference number: 3 (lower is better) Translates to: GERERAEPVDRL*SKEIKPTHSLY Trigger: ATACAGGGAATGAGTGGGTTTTATTTCTTTGGAGCAAAGTCTATCAACTGGCTCAGCTCTCTCTCGTTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR TCA 72 bp | GTGAGCTCCTTCAAATCACTTCAAATCACACTGCTCTaGGAGCATAGCCTAGCAGATCATTTCCTTTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: VSSFKSLQITLL*EHSLADHFLLF Trigger: AAACAAAAGGAAATGATCTGCTAGGCTATGCTCTCAGAGCAGTGTGATTTGAAGTGATTTGAAGGAGCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR TCA 72 bp | TTTGAATTGATACTAAGGTTTCCATCAAGCTCCTTATaGAAGCTAGCTCTGAATGTGGTCCTGCTCCCTGAT | + |
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Preference number: 3 (lower is better) Translates to: FELILRFPSSSL*KLALNVVLLPD Trigger: ATCAGGGAGCAGGACCACATTCAGAGCTAGCTTTCATAAGGAGCTTGATGGAAACCTTAGTATCAATTCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | GACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCGACAAGCAGCACTGCACAGCCCGGGACTaGTGCGCCCTGGCCGGGACT | + |
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Preference number: 4 (lower is better) Translates to: DSALHWDWGRSFSPDKQHCTARD*CALAGT Trigger: AGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGTGCA...GTGCTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | GACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCGACAAGCAGCACGCCAGCGCCGGTGGCTaGTCTGTCTGCACAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: DSALHWDWGRSFSPDKQHASAGG*SVCTAR Trigger: CCGGGCTGTGCAGACAGAGCAGCCACCGGCGCTGGC...GTGCTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | AGGCCCCAGCATGGCCAGTGGGCAGCATCCTTCCCCCTCTCCTCAAGCAACCTTGCCAGCGCCGGTGGCTaGTCTGTCTGCACAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: RPQHGQWAASFPLSSSNLASAGG*SVCTAR Trigger: CCGGGCTGTGCAGACAGAGCAGCCACCGGCGCTGGC...AAGGTTGCTTGAGGAGAGGGGGAAGGATGCTGCCCACTGGCCATGCTGGGGCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR TCA 90 bp | GACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCGACAAGCAGCACGGTCAGGCCGGAAGGTaGTGGTCTTGCTGGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: DSALHWDWGRSFSPDKQHGQAGR*WSCWWG Trigger: TCCCCACCAGCAAGACCATCACCTTCCGGCCTGACC...GTGCTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | AAGCTTCTCTCCCGACAAGCAGCACTTCGTGCCACCCAGCTCCAGAACTGGACCCGGCCATGCCCGCTCTaGCCAGGGTGCGTGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: KLLSRQAALRATQLQNWTRPCPL*PGCVLH Trigger: ATGGAGCACGCACCCTGGGCAGAGCGGGCATGGCCG...GGTCCAGTTCTGGAGCTGGGTGGCACGAAGTGCTGCTTGTCGGGAGAGAAGCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCACAGCCCGGGACTGCTaGGCCCTGGCCGGGACTCCT | + |
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Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMATARDC*ALAGTP Trigger: AGGAGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGT...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | AGCATGGCCAGTGGGCAGCATCCTTCCCCCTCTCCTCAAGCAACCTTACAAGAGTGCACAGCCCGGGACTaGTGCGCCCTGGCCGGGACT | + |
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Preference number: 4 (lower is better) Translates to: SMASGQHPSPSPQATLQECTARD*CALAGT Trigger: AGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGTGCA...CTCTTGTAAGGTTGCTTGAGGAGAGGGGGAAGGATGCTGCCCACTGGCCATGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | TTGCCCTGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCCCGCGGCCAGAGAACTaGACTGTGATGCCCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LPCRSLDSALHWDWGRSFPRPEN*TVMPCG Trigger: GCCGCAGGGCATCACAGTGCAGTTCTCTGGCCGCGG...GAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR CCA 90 bp | CCCTGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTGTTCGCCAGCGCCGGTaGCTGCTCTGTCTGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: PCRSLDSALHWDWGRSFSVRQRR*LLCLHS Trigger: GCTGTGCAGACAGAGCAGCCACCGGCGCTGGCGAAC...AGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR TCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCCTCTGCTCAAGTCGCTaGGCCCGCAGCTGGGCGACG | + |
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Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMALCSSR*ARSWAT Trigger: CGTCGCCCAGCTGCGGGCTCAGCGACTTGAGCAGAG...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | TGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCCGCAGCAGTTTGGGATaGTCTGCTGGAGGAGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: CRSLDSALHWDWGRSFSPRSSLG*SAGGEG Trigger: CCCCTCTCCTCCAGCAGAGCATCCCAAACTGCTGCG...GGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | CCCTGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTTGGGCCTTGCGCTCCTaGACATTGACAGCCGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PCRSLDSALHWDWGRSFSWALRS*TLTAAL Trigger: CAAGGCGGCTGTCAATGTGCAGGAGCGCAAGGCCCA...AGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR CCA 90 bp | CCCTGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTAGGGCCCCTGGAGTCTaGTGGTGGCAGGGAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCRSLDSALHWDWGRSFSRAPGV*WWQGIL Trigger: GAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCT...AGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR TCA 90 bp | GACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCGACAAGCAGCACTGTGGAGAGTGGCAGTaGATGCCACTGTCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSALHWDWGRSFSPDKQHCGEWQ*MPLSHR Trigger: CCTGTGTGACAGTGGCATTCACTGCCACTCTCCACA...GTGCTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR TCA 90 bp | AGCATGGCCAGTGGGCAGCATCCTTCCCCCTCTCCTCAAGCAACCTTACAAGAGGGTCAGGCCGGAAGGTaGTGGTCTTGCTGGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SMASGQHPSPSPQATLQEGQAGR*WSCWWG Trigger: TCCCCACCAGCAAGACCATCACCTTCCGGCCTGACC...CTCTTGTAAGGTTGCTTGAGGAGAGGGGGAAGGATGCTGCCCACTGGCCATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | GACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCGACAAGCAGCACCAGTTTGGGATGCTCTaGTGGAGGAGAGGGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: DSALHWDWGRSFSPDKQHQFGML*WRRGGH Trigger: ATGTCCCCCTCTCCTCCAGCAGAGCATCCCAAACTG...GTGCTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCTCAGTAGCCCGAGTTTaGGCAGAGCCTCGCGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMASVARV*AEPRAE Trigger: CTCGGCGCGAGGCTCTGCGCAAACTCGGGCTACTGA...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTTCTCTCCCGACAAGCAGCACTTCGTGCCACCCAGCTCCAGAACTGGACCGCCCCTGGAGTCTGGTaGTGGCAGGGAATTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLLSRQAALRATQLQNWTAPGVW*WQGILS Trigger: GCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGC...GGTCCAGTTCTGGAGCTGGGTGGCACGAAGTGCTGCTTGTCGGGAGAGAAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGGAGAGGGAATCCTGAGTATCAGAGTCTGGACCAAGTCGCAGTCATGGAGCTCTGCTCAAGTCGCTaGGCCCGCAGCTGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: KRRGNPEYQSLDQVAVMELCSSR*ARSWAT Trigger: CGTCGCCCAGCTGCGGGCTCAGCGACTTGAGCAGAG...CTCCATGACTGCGACTTGGTCCAGACTCTGATACTCAGGATTCCCTCTCCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCCAGAGAACTGCACTGTaGTGCCCTGCGGCCGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMAQRTAL*CPAAGN Trigger: GTTTCCGGCCGCAGGGCATCACAGTGCAGTTCTCTG...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTGAGAGTGGCAGTGAATaGCACTGTCACACAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCRSLDSALHWDWGRSFSESGSE*HCHTGL Trigger: CAGCCCTGTGTGACAGTGGCATTCACTGCCACTCTC...AGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | TTGCCCTGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCCATTCCCCAGGCCTaGCTTCCTTTGAAGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LPCRSLDSALHWDWGRSFSIPQA*LPLKGM Trigger: CATCCCCTTCAAAGGAAGGCAGGCCTGGGGAATGGA...GAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCTGGGCCTTGCGCTCCTaGACATTGACAGCCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMAWALRS*TLTAAL Trigger: CAAGGCGGCTGTCAATGTGCAGGAGCGCAAGGCCCA...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | AGGCCCCAGCATGGCCAGTGGGCAGCATCCTTCCCCCTCTCCTCAAGCAACCTTTGCTCTTCCGCCTTCTaGCACCGCTCTTCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPQHGQWAASFPLSSSNLCSSAF*HRSSDD Trigger: ATCATCAGAAGAGCGGTGGCAGAAGGCGGAAGAGCA...AAGGTTGCTTGAGGAGAGGGGGAAGGATGCTGCCCACTGGCCATGCTGGGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | GACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCGACAAGCAGCACCTCTTCCAGAGACTGTaGAGAGTGGCAGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSALHWDWGRSFSPDKQHLFQRL*RVAVNA Trigger: GGCATTCACTGCCACTCTCCACAGTCTCTGGAAGAG...GTGCTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCCGGGCTCAGAGTGGCTaGAAGGGCTCTCTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMARAQSG*KGSLPE Trigger: CTCTGGAAGAGAGCCCTTCCAGCCACTCTGAGCCCG...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCTTTGGGATGCTCTGCTaGAGGAGAGGGGGACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRSLDSALHWDWGRSFSPFGMLC*RRGGHQ Trigger: CTGATGTCCCCCTCTCCTCCAGCAGAGCATCCCAAA...GGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | GACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCGACAAGCAGCACCCTTTGAAGGGGATGTaGGAGACAGGGCTTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSALHWDWGRSFSPDKQHPLKGM*ETGLHC Trigger: GCAATGAAGCCCTGTCTCCCACATCCCCTTCAAAGG...GTGCTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | AGGCCCCAGCATGGCCAGTGGGCAGCATCCTTCCCCCTCTCCTCAAGCAACCTTCCTTTGAAGGGGATGTaGGAGACAGGGCTTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPQHGQWAASFPLSSSNLPLKGM*ETGLHC Trigger: GCAATGAAGCCCTGTCTCCCACATCCCCTTCAAAGG...AAGGTTGCTTGAGGAGAGGGGGAAGGATGCTGCCCACTGGCCATGCTGGGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCAGGCCTGCCTTCCTTTaGAGGGGATGTGGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMARPAFL*RGCGRQ Trigger: CTGTCTCCCACATCCCCTTCAAAGGAAGGCAGGCCT...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | CCCTGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTTCCTCATGTGTGAGGTaGTTCAGGCTCTCGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PCRSLDSALHWDWGRSFSSSCVR*FRLSSS Trigger: GGATGACGAGAGCCTGAAGCACCTCACACATGAGGA...AGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCTGCTCTTCCGCCTTCTaGCACCGCTCTTCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CRSLDSALHWDWGRSFSPCSSAF*HRSSDD Trigger: ATCATCAGAAGAGCGGTGGCAGAAGGCGGAAGAGCA...GGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | CACCTGAAGAGACCGGGAACCTCAGGTCCACCTTTCCTTTTCATTTCAATCTTGACAGCCCGGGACTGCTaGGCCCTGGCCGGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLKRPGTSGPPFLFISILTARDC*ALAGTP Trigger: AGGAGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGT...CAAGATTGAAATGAAAAGGAAAGGTGGACCTGAGGTTCCCGGTCTCTTCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGGAGAGGGAATCCTGAGTATCAGAGTCTGGACCAAGTCGCAGTCATGGAGCCGCGGCCAGAGAACTaGACTGTGATGCCCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRRGNPEYQSLDQVAVMEPRPEN*TVMPCG Trigger: GCCGCAGGGCATCACAGTGCAGTTCTCTGGCCGCGG...CTCCATGACTGCGACTTGGTCCAGACTCTGATACTCAGGATTCCCTCTCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | GACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCGACAAGCAGCACTACTTGAGGCATATCTaGAAGGCTCTCAGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSALHWDWGRSFSPDKQHYLRHI*KALSFP Trigger: GGGGAAGCTGAGAGCCTTCCAGATATGCCTCAAGTA...GTGCTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGAGAGGGAATCCTGAGTATCAGAGTCTGGACCAAGTCGCAGTCATGGAGACACCTCAGGGCCCCTaGAGTCTGGTGGTGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRRGNPEYQSLDQVAVMETPQGP*SLVVAG Trigger: CCCTGCCACCACCAGACTCCAGGGGCCCTGAGGTGT...CTCCATGACTGCGACTTGGTCCAGACTCTGATACTCAGGATTCCCTCTCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCAATCACCAGAGGAGTaGGCACAGAACGCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCRSLDSALHWDWGRSFSQSPEE*AQNAAV Trigger: AACTGCTGCGTTCTGTGCCCACTCCTCTGGTGATTG...AGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCCGTCTCCAGAGACTCTaGTTTCTGCTGGTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMARLQRL*FLLVPR Trigger: CCTGGGAACCAGCAGAAACCAGAGTCTCTGGAGACG...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTTCTCTCCCGACAAGCAGCACTTCGTGCCACCCAGCTCCAGAACTGGACCCAATCACCAGAGGAGTaGGCACAGAACGCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLLSRQAALRATQLQNWTQSPEE*AQNAAV Trigger: AACTGCTGCGTTCTGTGCCCACTCCTCTGGTGATTG...GGTCCAGTTCTGGAGCTGGGTGGCACGAAGTGCTGCTTGTCGGGAGAGAAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCCCTTTTCCTCATGTGTaGGGTGCTTCAGGCTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMAPFPHV*GASGSR Trigger: ACGAGAGCCTGAAGCACCTCACACATGAGGAAAAGG...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGGAGAGGGAATCCTGAGTATCAGAGTCTGGACCAAGTCGCAGTCATGGAGCAGAGAACTGCACTGTaGTGCCCTGCGGCCGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRRGNPEYQSLDQVAVMEQRTAL*CPAAGN Trigger: GTTTCCGGCCGCAGGGCATCACAGTGCAGTTCTCTG...CTCCATGACTGCGACTTGGTCCAGACTCTGATACTCAGGATTCCCTCTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCTCCTCATGTGTGAGGTaGTTCAGGCTCTCGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMASSCVR*FRLSSS Trigger: GGATGACGAGAGCCTGAAGCACCTCACACATGAGGA...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCGACGCAGGTGCGGGCTaGACTAAATCGATGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: QCGHTSSTQAIPAVSPMADAGAG*TKSMTS Trigger: AGATGTCATCGATTTAGTGCAGCCCGCACCTGCGTC...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGGAGAGGGAATCCTGAGTATCAGAGTCTGGACCAAGTCGCAGTCATGGAGCGCAGCAGTTTGGGATaGTCTGCTGGAGGAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRRGNPEYQSLDQVAVMERSSLG*SAGGEG Trigger: CCCCTCTCCTCCAGCAGAGCATCCCAAACTGCTGCG...CTCCATGACTGCGACTTGGTCCAGACTCTGATACTCAGGATTCCCTCTCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | AGCATGGCCAGTGGGCAGCATCCTTCCCCCTCTCCTCAAGCAACCTTACAAGAGCTCTTCCAGAGACTGTaGAGAGTGGCAGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SMASGQHPSPSPQATLQELFQRL*RVAVNA Trigger: GGCATTCACTGCCACTCTCCACAGTCTCTGGAAGAG...CTCTTGTAAGGTTGCTTGAGGAGAGGGGGAAGGATGCTGCCCACTGGCCATGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | AAGCTTCTCTCCCGACAAGCAGCACTTCGTGCCACCCAGCTCCAGAACTGGACCTACTTGAGGCATATCTaGAAGGCTCTCAGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLLSRQAALRATQLQNWTYLRHI*KALSFP Trigger: GGGGAAGCTGAGAGCCTTCCAGATATGCCTCAAGTA...GGTCCAGTTCTGGAGCTGGGTGGCACGAAGTGCTGCTTGTCGGGAGAGAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | GCATCCTTCCCCCTCTCCTCAAGCAACCTTACAAGAGCGTGTAACCTCAGTGAGCAGTTTGGGATGCTCTaGTGGAGGAGAGGGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: ASFPLSSSNLTRACNLSEQFGML*WRRGGH Trigger: ATGTCCCCCTCTCCTCCAGCAGAGCATCCCAAACTG...CTCACTGAGGTTACACGCTCTTGTAAGGTTGCTTGAGGAGAGGGGGAAGGATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | CACCTGAAGAGACCGGGAACCTCAGGTCCACCTTTCCTTTTCATTTCAATCTTGTCAGTAGCCCGAGTTTaGGCAGAGCCTCGCGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLKRPGTSGPPFLFISILSVARV*AEPRAE Trigger: CTCGGCGCGAGGCTCTGCGCAAACTCGGGCTACTGA...CAAGATTGAAATGAAAAGGAAAGGTGGACCTGAGGTTCCCGGTCTCTTCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGAGAGGGAATCCTGAGTATCAGAGTCTGGACCAAGTCGCAGTCATGGAGTCTTCGGGCTCAGAGTaGCTGGAAGGGCTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRRGNPEYQSLDQVAVMESSGSE*LEGLSS Trigger: GGAAGAGAGCCCTTCCAGCCACTCTGAGCCCGAAGA...CTCCATGACTGCGACTTGGTCCAGACTCTGATACTCAGGATTCCCTCTCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR TCA 90 bp | TGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCTTCTCAGATATTTTCTaGGCAATCACCAGAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRSLDSALHWDWGRSFSPFSDIF*AITRGV Trigger: CACTCCTCTGGTGATTGCTCAGAAAATATCTGAGAA...GGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | AGATCCCCCATAATCAAAGCCCTGGGAATTTGGGAAAAACACACTTGTTGGTTTCGGCCATGCCCGCTCTaGCCAGGGTGCGTGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSPIIKALGIWEKHTCWFRPCPL*PGCVLH Trigger: ATGGAGCACGCACCCTGGGCAGAGCGGGCATGGCCG...AAACCAACAAGTGTGTTTTTCCCAAATTCCCAGGGCTTTGATTATGGGGGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGAGAGGGAATCCTGAGTATCAGAGTCTGGACCAAGTCGCAGTCATGGAGCGTCTCCAGAGACTCTaGTTTCTGCTGGTTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KRRGNPEYQSLDQVAVMERLQRL*FLLVPR Trigger: CCTGGGAACCAGCAGAAACCAGAGTCTCTGGAGACG...CTCCATGACTGCGACTTGGTCCAGACTCTGATACTCAGGATTCCCTCTCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | CACCTGAAGAGACCGGGAACCTCAGGTCCACCTTTCCTTTTCATTTCAATCTTGGCCCCTGGAGTCTGGTaGTGGCAGGGAATTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLKRPGTSGPPFLFISILAPGVW*WQGILS Trigger: GCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGC...CAAGATTGAAATGAAAAGGAAAGGTGGACCTGAGGTTCCCGGTCTCTTCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS-3UTR GCA 90 bp | GACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCGACAAGCAGCACCTTCAAGAAATGGAGTaGCATGTTTTGTATCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DSALHWDWGRSFSPDKQHLQEME*HVLYQM Trigger: CATCTGATACAAAACATGGCACTCCATTTCTTGAAG...GTGCTGCTTGTCGGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS-3UTR CCA 90 bp | AATGTGTCCTTCAACAGCTCATTAGAAGTCGGAGTCTCAGTAAGACTCACGGGAAGGGCCCCTGGAGTCTaGTGGTGGCAGGGAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NVSFNSSLEVGVSVRLTGRAPGV*WWQGIL Trigger: GAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCT...TCCCGTGAGTCTTACTGAGACTCCGACTTCTAATGAGCTGTTGAAGGACACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS-3UTR TCA 90 bp | AGCATGGCCAGTGGGCAGCATCCTTCCCCCTCTCCTCAAGCAACCTTACAAGAGTTCTCAGATATTTTCTaGGCAATCACCAGAGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SMASGQHPSPSPQATLQEFSDIF*AITRGV Trigger: CACTCCTCTGGTGATTGCTCAGAAAATATCTGAGAA...CTCTTGTAAGGTTGCTTGAGGAGAGGGGGAAGGATGCTGCCCACTGGCCATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR TCA 90 bp | AATGTGTCCTTCAACAGCTCATTAGAAGTCGGAGTCTCAGTAAGACTCACGGGATGTGGAGAGTGGCAGTaGATGCCACTGTCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVSFNSSLEVGVSVRLTGCGEWQ*MPLSHR Trigger: CCTGTGTGACAGTGGCATTCACTGCCACTCTCCACA...TCCCGTGAGTCTTACTGAGACTCCGACTTCTAATGAGCTGTTGAAGGACACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR CCA 90 bp | AATGTGTCCTTCAACAGCTCATTAGAAGTCGGAGTCTCAGTAAGACTCACGGGATTTGGGATGCTCTGCTaGAGGAGAGGGGGACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVSFNSSLEVGVSVRLTGFGMLC*RRGGHQ Trigger: CTGATGTCCCCCTCTCCTCCAGCAGAGCATCCCAAA...TCCCGTGAGTCTTACTGAGACTCCGACTTCTAATGAGCTGTTGAAGGACACATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR CCA 90 bp | CTTCAGTTATTAAGCAAACACTGTGTATGGCATCTTACTTTGTCAAAGGGACCTGTTCGCCAGCGCCGGTaGCTGCTCTGTCTGCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQLLSKHCVWHLTLSKGPVRQRR*LLCLHS Trigger: GCTGTGCAGACAGAGCAGCCACCGGCGCTGGCGAAC...AGGTCCCTTTGACAAAGTAAGATGCCATACACAGTGTTTGCTTAATAACTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR CCA 90 bp | AGATCCCCCATAATCAAAGCCCTGGGAATTTGGGAAAAACACACTTGTTGGTTTTCTTCGGGCTCAGAGTaGCTGGAAGGGCTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSPIIKALGIWEKHTCWFSSGSE*LEGLSS Trigger: GGAAGAGAGCCCTTCCAGCCACTCTGAGCCCGAAGA...AAACCAACAAGTGTGTTTTTCCCAAATTCCCAGGGCTTTGATTATGGGGGATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| 3UTR CAA 72 bp | GAACTGAGAACGGAAGCAGATATTTCCCTCTGGGGATaGCAAGGTAGGGCTTTGGCTTGCAGGACTCTAATT | + |
|
Preference number: 4 (lower is better) Translates to: ELRTEADISLWG*QGRALACRTLI Trigger: AATTAGAGTCCTGCAAGCCAAAGCCCTACCTTGCAATCCCCAGAGGGAAATATCTGCTTCCGTTCTCAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | TTTAAAATGTTTGAGATGGCTTCAGGAGAACGAGAGAGAGCTGAGCCAGTTGATGAGAGTGGCAGTGAATaGCACTGTCACACAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKMFEMASGERERAEPVDESGSE*HCHTGL Trigger: CAGCCCTGTGTGACAGTGGCATTCACTGCCACTCTC...ATCAACTGGCTCAGCTCTCTCTCGTTCTCCTGAAGCCATCTCAAACATTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR TCA 90 bp | CTTCAGTTATTAAGCAAACACTGTGTATGGCATCTTACTTTGTCAAAGGGACCTAGGCCTGCCTTCCTTTaGAGGGGATGTGGGAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LQLLSKHCVWHLTLSKGPRPAFL*RGCGRQ Trigger: CTGTCTCCCACATCCCCTTCAAAGGAAGGCAGGCCT...AGGTCCCTTTGACAAAGTAAGATGCCATACACAGTGTTTGCTTAATAACTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| 3UTR CAA 72 bp | CAGTTATTAAGCAAACACTGTGTATGGCATCTTACTTaGTCAAAGGGACCTCCTGGCCCCTCAGCAAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: QLLSKHCVWHLT*SKGPPGPSANP Trigger: TGGGTTTGCTGAGGGGCCAGGAGGTCCCTTTGACAAAGTAAGATGCCATACACAGTGTTTGCTTAATAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | AAGGTTCCTAAAAGCAAAAGAGAAATTGTTGTTGTTGTTGTTGGTGGTGTGGTTTCCATTCCCCAGGCCTaGCTTCCTTTGAAGGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KVPKSKREIVVVVVGGVVSIPQA*LPLKGM Trigger: CATCCCCTTCAAAGGAAGGCAGGCCTGGGGAATGGA...AACCACACCACCAACAACAACAACAACAATTTCTCTTTTGCTTTTAGGAACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS-3UTR GCA 90 bp | TTTAAAATGTTTGAGATGGCTTCAGGAGAACGAGAGAGAGCTGAGCCAGTTGATCTTCAAGAAATGGAGTaGCATGTTTTGTATCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: FKMFEMASGERERAEPVDLQEME*HVLYQM Trigger: CATCTGATACAAAACATGGCACTCCATTTCTTGAAG...ATCAACTGGCTCAGCTCTCTCTCGTTCTCCTGAAGCCATCTCAAACATTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
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| CDS CCA 90 bp | GCGCCGGTGGCTGCTCTGTCTGCACAGCCCGGGACTGCTGCGCCCTaGCCGGGACTCCTGCACAAGGTGCCCCGGGCTCGCCGGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: APVAALSAQPGTAAP*PGLLHKVPRARRPC Trigger: GCATGGCCGGCGAGCCCGGGGCACCTTGTGCAGGAGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGTGCAGACAGAGCAGCCACCGGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 90 bp | CTCTGTCTGCACAGCCCGGGACTGCTGCGCCCTGGCCGGGACTCCTaGACAAGGTGCCCCGGGCTCGCCGGCCATGCCCGCTCTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCLHSPGLLRPGRDS*TRCPGLAGHARSAQ Trigger: CTGGGCAGAGCGGGCATGGCCGGCGAGCCCGGGGCACCTTGTGCAGGAGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGTGCAGACAGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS TCA 90 bp | CGCGCCGAGCTTCCTCAGTGGAGCCGCGGCCAGAGAACTGCACTGTaGTGCCCTGCGGCCGGAAACCCACCGCCCGGGGGAGCGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RAELPQWSRGQRTAL*CPAAGNPPPGGASP Trigger: CGGGCTCGCTCCCCCGGGCGGTGGGTTTCCGGCCGCAGGGCATCACAGTGCAGTTCTCTGGCCGCGGCTCCACTGAGGAAGCTCGGCGCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS CCA 90 bp | GCGCAGGGCCTCGTGTACGCTCTGGAAGCCGTTCGCCAGCGCCGGTaGCTGCTCTGTCTGCACAGCCCGGGACTGCTGCGCCCTGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AQGLVYALEAVRQRR*LLCLHSPGLLRPGR Trigger: CCGGCCAGGGCGCAGCAGTCCCGGGCTGTGCAGACAGAGCAGCCACCGGCGCTGGCGAACGGCTTCCAGAGCGTACACGAGGCCCTGCGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS GCA 90 bp | AGGGCCTCGTGTACGCTCTGGAAGCCGTTCGCCAGCGCCGGTGGCTaGTCTGTCTGCACAGCCCGGGACTGCTGCGCCCTGGCCGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RASCTLWKPFASAGG*SVCTARDCCALAGT Trigger: AGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGTGCAGACAGAGCAGCCACCGGCGCTGGCGAACGGCTTCCAGAGCGTACACGAGGCCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS GCA 90 bp | GCTTCCTCAGTGGAGCCGCGGCCAGAGAACTGCACTGTGATGCCCTaGGGCCGGAAACCCACCGCCCGGGGGAGCGAGCCCGTGCGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSVEPRPENCTVMP*GRKPTARGSEPVRL Trigger: CAAGCGCACGGGCTCGCTCCCCCGGGCGGTGGGTTTCCGGCCGCAGGGCATCACAGTGCAGTTCTCTGGCCGCGGCTCCACTGAGGAAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS GCA 90 bp | AGAGCCTCGCGCCGAGCTTCCTCAGTGGAGCCGCGGCCAGAGAACTaGACTGTGATGCCCTGCGGCCGGAAACCCACCGCCCGGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RASRRASSVEPRPEN*TVMPCGRKPTARGS Trigger: GCTCCCCCGGGCGGTGGGTTTCCGGCCGCAGGGCATCACAGTGCAGTTCTCTGGCCGCGGCTCCACTGAGGAAGCTCGGCGCGAGGCTCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS GCA 90 bp | GGACTCCTGCACAAGGTGCCCCGGGCTCGCCGGCCATGCCCGCTCTaGCCAGGGTGCGTGCTCCATCCGCAGAGCCACTCCTCTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GLLHKVPRARRPCPL*PGCVLHPQSHSSAL Trigger: AAGAGCAGAGGAGTGGCTCTGCGGATGGAGCACGCACCCTGGGCAGAGCGGGCATGGCCGGCGAGCCCGGGGCACCTTGTGCAGGAGTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS CCA 90 bp | GGGACGAAGGAGCTGGGCTCGCTGCGCAGGGCCTCGTGTACGCTCTaGAAGCCGTTCGCCAGCGCCGGTGGCTGCTCTGTCTGCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTKELGSLRRASCTL*KPFASAGGCSVCTA Trigger: GGCTGTGCAGACAGAGCAGCCACCGGCGCTGGCGAACGGCTTCCAGAGCGTACACGAGGCCCTGCGCAGCGAGCCCAGCTCCTTCGTCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS TCA 90 bp | TCTGGCGCGCCAGCTTGCCGGTCACAGCGGGGTCAGGCCGGAAGGTaGTGGTCTTGCTGGTGGGGACGAAGGAGCTGGGCTCGCTGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGAPACRSQRGQAGR*WSCWWGRRSWARCA Trigger: TGCGCAGCGAGCCCAGCTCCTTCGTCCCCACCAGCAAGACCATCACCTTCCGGCCTGACCCCGCTGTGACCGGCAAGCTGGCGCGCCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS CCA 90 bp | CGGGGACAGGCAGGGAGGGCGGCAAAGGAAACACCTCAGGGCCCCTaGAGTCTGGTGGTGGCAGGGAATTCTCAGCGGCTTGTTTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGQAGRAAKETPQGP*SLVVAGNSQRLVSH Trigger: GTGGGAAACAAGCCGCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCTGAGGTGTTTCCTTTGCCGCCCTCCCTGCCTGTCCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS TCA 90 bp | AACTGCTGCACCGGCTCTCCAGACTGCCACCTCTGCTCAAGTCGCTaGGCCCGCAGCTGGGCGACGTGTCAGAGTCCGTCTCCAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: NCCTGSPDCHLCSSR*ARSWATCQSPSPET Trigger: AGTCTCTGGAGACGGACTCTGACACGTCGCCCAGCTGCGGGCTCAGCGACTTGAGCAGAGGTGGCAGTCTGGAGAGCCGGTGCAGCAGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS GCA 90 bp | GTGCGTGCTCCATCCGCAGAGCCACTCCTCTGCTCTTCCGCCTTCTaGCACCGCTCTTCTGATGATGTGTCGCCCGCAGCGATGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRAPSAEPLLCSSAF*HRSSDDVSPAAMKD Trigger: GTCCTTCATCGCTGCGGGCGACACATCATCAGAAGAGCGGTGGCAGAAGGCGGAAGAGCAGAGGAGTGGCTCTGCGGATGGAGCACGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS CCA 90 bp | AGGCAGGGAGGGCGGCAAAGGAAACACCTCAGGGCCCCTGGAGTCTaGTGGTGGCAGGGAATTCTCAGCGGCTTGTTTCCCACCTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RQGGRQRKHLRAPGV*WWQGILSGLFPTFK Trigger: CTTGAAGGTGGGAAACAAGCCGCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCTGAGGTGTTTCCTTTGCCGCCCTCCCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS CCA 90 bp | TCCTTGCCTGCGCTGTTGGTCACGCTTATGTTGCTGGGGAAGCGATaGACCTTGGGTGCTGACTGGGTCGTGTGTCGATGCCACACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLPALLVTLMLLGKR*TLGADWVVCRCHTP Trigger: CGGCGTGTGGCATCGACACACGACCCAGTCAGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS TCA 90 bp | GGCTCTCAGCTTCCCCAGACGCAGGTGCGGGCTGCACTAAATCGATaGCATCTTCGGGCTCAGAGTGGCTGGAAGGGCTCTCTTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSQLPQTQVRAALNR*HLRAQSGWKGSLPE Trigger: CTCTGGAAGAGAGCCCTTCCAGCCACTCTGAGCCCGAAGATGTCATCGATTTAGTGCAGCCCGCACCTGCGTCTGGGGAAGCTGAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS CCA 90 bp | CTGCGCTGTTGGTCACGCTTATGTTGCTGGGGAAGCGATGGACCTTaGGTGCTGACTGGGTCGTGTGTCGATGCCACACGCCGACATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRCWSRLCCWGSDGP*VLTGSCVDATRRHG Trigger: ACCATGTCGGCGTGTGGCATCGACACACGACCCAGTCAGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR CAA 90 bp | TTGCCCTGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCCAGGCCTGCCTTCCTTaGAAGGGGATGTGGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LPCRSLDSALHWDWGRSFQACLP*KGMWET Trigger: TGTCTCCCACATCCCCTTCAAAGGAAGGCAGGCCTG...GAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCAGGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS TCA 90 bp | GTTGGTCACGCTTATGTTGCTGGGGAAGCGATGGACCTTGGGTGCTaGCTGGGTCGTGTGTCGATGCCACACGCCGACATGGTCTCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: VGHAYVAGEAMDLGC*LGRVSMPHADMVSV Trigger: AACGGAGACCATGTCGGCGTGTGGCATCGACACACGACCCAGTCAGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS GCA 90 bp | GGCATATCTGGAAGGCTCTCAGCTTCCCCAGACGCAGGTGCGGGCTaGACTAAATCGATGACATCTTCGGGCTCAGAGTGGCTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GISGRLSASPDAGAG*TKSMTSSGSEWLEG Trigger: CCCTTCCAGCCACTCTGAGCCCGAAGATGTCATCGATTTAGTGCAGCCCGCACCTGCGTCTGGGGAAGCTGAGAGCCTTCCAGATATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS CCA 90 bp | ATCTTCGGGCTCAGAGTGGCTGGAAGGGCTCTCTTCCAGAGACTGTaGAGAGTGGCAGTGAATGCCACTGTCACACAGGGCTGGCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: IFGLRVAGRALFQRL*RVAVNATVTQGWLV Trigger: GACGAGCCAGCCCTGTGTGACAGTGGCATTCACTGCCACTCTCCACAGTCTCTGGAAGAGAGCCCTTCCAGCCACTCTGAGCCCGAAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS CCA 90 bp | GGAGGGCGGCAAAGGAAACACCTCAGGGCCCCTGGAGTCTGGTGGTaGCAGGGAATTCTCAGCGGCTTGTTTCCCACCTTCAAGAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: GGRQRKHLRAPGVWW*QGILSGLFPTFKKW Trigger: CCATTTCTTGAAGGTGGGAAACAAGCCGCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCTGAGGTGTTTCCTTTGCCGCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS CCA 90 bp | CAGGGAGGGCGGCAAAGGAAACACCTCAGGGCCCCTGGAGTCTGGTaGTGGCAGGGAATTCTCAGCGGCTTGTTTCCCACCTTCAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGGRQRKHLRAPGVW*WQGILSGLFPTFKK Trigger: TTTCTTGAAGGTGGGAAACAAGCCGCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCTGAGGTGTTTCCTTTGCCGCCCTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS-3UTR CAA 90 bp | TGCAGGTCTCTTGACTCCGCGCTGCACTGGGATTGGGGCAGAAGCTTCTCTCCCTTGGTCACGCTTATGTaGCTGGGGAAGCGATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: CRSLDSALHWDWGRSFSPLVTLM*LGKRWT Trigger: GGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAA...GGGAGAGAAGCTTCTGCCCCAATCCCAGTGCAGCGCGGAGTCAAGAGACCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR CAA 90 bp | CAGTGTGGACATACAAGTTCCACCCAGGCCATTCCAGCAGTCTCACCCATGGCCGACATGCCGTTGATGTaGGCCAGGACCTGGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QCGHTSSTQAIPAVSPMADMPLM*ARTWAL Trigger: CAAGGCCCAGGTCCTGGCCAACATCAACGGCATGTC...GGCCATGGGTGAGACTGCTGGAATGGCCTGGGTGGAACTTGTATGTCCACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS GCA 90 bp | GGCTGGAAGGGCTCTCTTCCAGAGACTGTGGAGAGTGGCAGTGAATaGCACTGTCACACAGGGCTGGCTCGTCAAAGTCATATTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GWKGSLPETVESGSE*HCHTGLARQSHIPG Trigger: CCCTGGAATATGACTTTGACGAGCCAGCCCTGTGTGACAGTGGCATTCACTGCCACTCTCCACAGTCTCTGGAAGAGAGCCCTTCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS CCA 90 bp | TTTTCTGAGCAATCACCAGAGGAGTGGGCACAGAACGCAGCAGTTTaGGATGCTCTGCTGGAGGAGAGGGGGACATCAGCTCCTTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSEQSPEEWAQNAAV*DALLEERGTSAPFA Trigger: CGCGAAAGGAGCTGATGTCCCCCTCTCCTCCAGCAGAGCATCCCAAACTGCTGCGTTCTGTGCCCACTCCTCTGGTGATTGCTCAGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS TCA 90 bp | GAGTGGCTGGAAGGGCTCTCTTCCAGAGACTGTGGAGAGTGGCAGTaGATGCCACTGTCACACAGGGCTGGCTCGTCAAAGTCATATTCC | + |
|
Preference number: 5 (lower is better) Translates to: EWLEGLSSRDCGEWQ*MPLSHRAGSSKSYS Trigger: GGAATATGACTTTGACGAGCCAGCCCTGTGTGACAGTGGCATTCACTGCCACTCTCCACAGTCTCTGGAAGAGAGCCCTTCCAGCCACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS GCA 90 bp | CACATTGACAGCCGCCTTGGAGATGGTCTTGTTGAAGTCCTTGCCTaGGCTGTTGGTCACGCTTATGTTGCTGGGGAAGCGATGGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: HIDSRLGDGLVEVLA*AVGHAYVAGEAMDL Trigger: AAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAGACCATCTCCAAGGCGGCTGTCAATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
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| CDS-3UTR CAA 90 bp | TTTAAAATGTTTGAGATGGCTTCAGGAGAACGAGAGAGAGCTGAGCCAGTTGATCAGGCCTGCCTTCCTTaGAAGGGGATGTGGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FKMFEMASGERERAEPVDQACLP*KGMWET Trigger: TGTCTCCCACATCCCCTTCAAAGGAAGGCAGGCCTG...ATCAACTGGCTCAGCTCTCTCTCGTTCTCCTGAAGCCATCTCAAACATTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS GCA 90 bp | GTCTCTTCAAAGAACAGGATAACGTCCTTTTCCTCATGTGTGAGGTaGTTCAGGCTCTCGTCATCCATAGTGAAACTTCTGGACCGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSSKNRITSFSSCVR*FRLSSSIVKLLDRE Trigger: TTCGCGGTCCAGAAGTTTCACTATGGATGACGAGAGCCTGAAGCACCTCACACATGAGGAAAAGGACGTTATCCTGTTCTTTGAAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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| CDS-3UTR CAA 90 bp | AAGAAAACTTCATGCTGCACAACTGAGTTCCGTGAGCTCCTTCAAATCACTTCATTGGTCACGCTTATGTaGCTGGGGAAGCGATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KKTSCCTTEFRELLQITSLVTLM*LGKRWT Trigger: GGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAA...TGAAGTGATTTGAAGGAGCTCACGGAACTCAGTTGTGCAGCATGAAGTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | CACAGCCCGGGACTGCTGCGCCCTGGCCGGGACTCCTaGACAAGGTGCCCCGGGCTCGCCGGCCATGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HSPGLLRPGRDS*TRCPGLAGHAR Trigger: GCGGGCATGGCCGGCGAGCCCGGGGCACCTTGTGCAGGAGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGTG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | GGACTCCTGCACAAGGTGCCCCGGGCTCGCCGGCCATaGCCGCTCTGCCCAGGGTGCGTGCTCCATCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLLHKVPRARRP*PLCPGCVLHPQ Trigger: CTGCGGATGGAGCACGCACCCTGGGCAGAGCGGGCATGGCCGGCGAGCCCGGGGCACCTTGTGCAGGAGTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | GCCGGTGGCTGCTCTGTCTGCACAGCCCGGGACTGCTaGGCCCTGGCCGGGACTCCTGCACAAGGTGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AGGCSVCTARDC*ALAGTPAQGAP Trigger: CGGGGCACCTTGTGCAGGAGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGTGCAGACAGAGCAGCCACCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | GTGGAGCCGCGGCCAGAGAACTGCACTGTGATGCCCTaGGGCCGGAAACCCACCGCCCGGGGGAGCGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VEPRPENCTVMP*GRKPTARGSEP Trigger: GGGCTCGCTCCCCCGGGCGGTGGGTTTCCGGCCGCAGGGCATCACAGTGCAGTTCTCTGGCCGCGGCTCCAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CCA 72 bp | GCTGCTCTGTCTGCACAGCCCGGGACTGCTGCGCCCTaGCCGGGACTCCTGCACAAGGTGCCCCGGGCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: AALSAQPGTAAP*PGLLHKVPRAR Trigger: GCGAGCCCGGGGCACCTTGTGCAGGAGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGTGCAGACAGAGCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | GGGCTCGCCGGCCATGCCCGCTCTGCCCAGGGTGCGTaGTCCATCCGCAGAGCCACTCCTCTGCTCTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GLAGHARSAQGA*SIRRATPLLFR Trigger: GCGGAAGAGCAGAGGAGTGGCTCTGCGGATGGAGCACGCACCCTGGGCAGAGCGGGCATGGCCGGCGAGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | CCCCGGGCTCGCCGGCCATGCCCGCTCTGCCCAGGGTaGGTGCTCCATCCGCAGAGCCACTCCTCTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: PRARRPCPLCPG*VLHPQSHSSAL Trigger: AAGAGCAGAGGAGTGGCTCTGCGGATGGAGCACGCACCCTGGGCAGAGCGGGCATGGCCGGCGAGCCCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | TGGAAGCCGTTCGCCAGCGCCGGTGGCTGCTCTGTCTaGACAGCCCGGGACTGCTGCGCCCTGGCCGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: WKPFASAGGCSV*TARDCCALAGT Trigger: AGTCCCGGCCAGGGCGCAGCAGTCCCGGGCTGTGCAGACAGAGCAGCCACCGGCGCTGGCGAACGGCTTCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CCA 72 bp | GAGCTGGGCTCGCTGCGCAGGGCCTCGTGTACGCTCTaGAAGCCGTTCGCCAGCGCCGGTGGCTGCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ELGSLRRASCTL*KPFASAGGCSV Trigger: GACAGAGCAGCCACCGGCGCTGGCGAACGGCTTCCAGAGCGTACACGAGGCCCTGCGCAGCGAGCCCAGCTC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS TCA 72 bp | CTTCCTCAGTGGAGCCGCGGCCAGAGAACTGCACTGTaGTGCCCTGCGGCCGGAAACCCACCGCCCGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPQWSRGQRTAL*CPAAGNPPPGG Trigger: TCCCCCGGGCGGTGGGTTTCCGGCCGCAGGGCATCACAGTGCAGTTCTCTGGCCGCGGCTCCACTGAGGAAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | TGTACGCTCTGGAAGCCGTTCGCCAGCGCCGGTGGCTaGTCTGTCTGCACAGCCCGGGACTGCTGCGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CTLWKPFASAGG*SVCTARDCCAL Trigger: CAGGGCGCAGCAGTCCCGGGCTGTGCAGACAGAGCAGCCACCGGCGCTGGCGAACGGCTTCCAGAGCGTACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | CGCCGAGCTTCCTCAGTGGAGCCGCGGCCAGAGAACTaGACTGTGATGCCCTGCGGCCGGAAACCCACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRASSVEPRPEN*TVMPCGRKPTA Trigger: GGCGGTGGGTTTCCGGCCGCAGGGCATCACAGTGCAGTTCTCTGGCCGCGGCTCCACTGAGGAAGCTCGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CCA 72 bp | CTCGTGTACGCTCTGGAAGCCGTTCGCCAGCGCCGGTaGCTGCTCTGTCTGCACAGCCCGGGACTGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LVYALEAVRQRR*LLCLHSPGLLR Trigger: GCGCAGCAGTCCCGGGCTGTGCAGACAGAGCAGCCACCGGCGCTGGCGAACGGCTTCCAGAGCGTACACGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | TGGTCTTGCTGGTGGGGACGAAGGAGCTGGGCTCGCTaGGCAGGGCCTCGTGTACGCTCTGGAAGCCGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: WSCWWGRRSWAR*AGPRVRSGSRS Trigger: CGAACGGCTTCCAGAGCGTACACGAGGCCCTGCGCAGCGAGCCCAGCTCCTTCGTCCCCACCAGCAAGACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS TCA 72 bp | ACCGGCTCTCCAGACTGCCACCTCTGCTCAAGTCGCTaGGCCCGCAGCTGGGCGACGTGTCAGAGTCCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: TGSPDCHLCSSR*ARSWATCQSPS Trigger: AGACGGACTCTGACACGTCGCCCAGCTGCGGGCTCAGCGACTTGAGCAGAGGTGGCAGTCTGGAGAGCCGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS GCA 72 bp | CCATCCGCAGAGCCACTCCTCTGCTCTTCCGCCTTCTaGCACCGCTCTTCTGATGATGTGTCGCCCGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSAEPLLCSSAF*HRSSDDVSPAA Trigger: CGCTGCGGGCGACACATCATCAGAAGAGCGGTGGCAGAAGGCGGAAGAGCAGAGGAGTGGCTCTGCGGATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CCA 72 bp | GCAGGGAGGGCGGCAAAGGAAACACCTCAGGGCCCCTaGAGTCTGGTGGTGGCAGGGAATTCTCAGCGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: AGRAAKETPQGP*SLVVAGNSQRL Trigger: AAGCCGCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCTGAGGTGTTTCCTTTGCCGCCCTCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS CCA 72 bp | GGGCGGCAAAGGAAACACCTCAGGGCCCCTGGAGTCTaGTGGTGGCAGGGAATTCTCAGCGGCTTGTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRQRKHLRAPGV*WWQGILSGLFP Trigger: GGGAAACAAGCCGCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCTGAGGTGTTTCCTTTGCCGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS CAA 90 bp | CCTGCGCTGTTGGTCACGCTTATGTTGCTGGGGAAGCGATGGACCTaGGGTGCTGACTGGGTCGTGTGTCGATGCCACACGCCGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: PALLVTLMLLGKRWT*GADWVVCRCHTPTW Trigger: CCATGTCGGCGTGTGGCATCGACACACGACCCAGTCAGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS TCA 72 bp | CTTCCCCAGACGCAGGTGCGGGCTGCACTAAATCGATaGCATCTTCGGGCTCAGAGTGGCTGGAAGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LPQTQVRAALNR*HLRAQSGWKGS Trigger: AGAGCCCTTCCAGCCACTCTGAGCCCGAAGATGTCATCGATTTAGTGCAGCCCGCACCTGCGTCTGGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS GCA 72 bp | GGAAGGCTCTCAGCTTCCCCAGACGCAGGTGCGGGCTaGACTAAATCGATGACATCTTCGGGCTCAGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRLSASPDAGAG*TKSMTSSGSEW Trigger: CCACTCTGAGCCCGAAGATGTCATCGATTTAGTGCAGCCCGCACCTGCGTCTGGGGAAGCTGAGAGCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS CCA 72 bp | ATGCCACACGCCGACATGGTCTCCGTTTCTAGAAGCTaGAGAAGTCGGTGTCCTCCATTCCCCAGGCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: MPHADMVSVSRS*RSRCPPFPRPA Trigger: GGCAGGCCTGGGGAATGGAGGACACCGACTTCTCCAGCTTCTAGAAACGGAGACCATGTCGGCGTGTGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CCA 72 bp | TGGTCACGCTTATGTTGCTGGGGAAGCGATGGACCTTaGGTGCTGACTGGGTCGTGTGTCGATGCCACACGC | + |
|
Preference number: 6 (lower is better) Translates to: WSRLCCWGSDGP*VLTGSCVDATR Trigger: GCGTGTGGCATCGACACACGACCCAGTCAGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CCA 72 bp | GCGCTGTTGGTCACGCTTATGTTGCTGGGGAAGCGATaGACCTTGGGTGCTGACTGGGTCGTGTGTCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: ALLVTLMLLGKR*TLGADWVVCRC Trigger: GCATCGACACACGACCCAGTCAGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 72 bp | GCAATCACCAGAGGAGTGGGCACAGAACGCAGCAGTTaGGGATGCTCTGCTGGAGGAGAGGGGGACATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AITRGVGTERSS*GCSAGGEGDIS Trigger: GCTGATGTCCCCCTCTCCTCCAGCAGAGCATCCCAAACTGCTGCGTTCTGTGCCCACTCCTCTGGTGATTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 72 bp | ACCTGGGCCTTGCGCTCCTGCACATTGACAGCCGCCTaGGAGATGGTCTTGTTGAAGTCCTTGCCTGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TWALRSCTLTAA*EMVLLKSLPAL Trigger: CAGCGCAGGCAAGGACTTCAACAAGACCATCTCCAAGGCGGCTGTCAATGTGCAGGAGCGCAAGGCCCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 90 bp | GCCTTGCGCTCCTGCACATTGACAGCCGCCTTGGAGATGGTCTTGTaGAAGTCCTTGCCTGCGCTGTTGGTCACGCTTATGTTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALRSCTLTAALEMVL*KSLPALLVTLMLLG Trigger: CCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAGACCATCTCCAAGGCGGCTGTCAATGTGCAGGAGCGCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CCA 72 bp | CAAAGGAAACACCTCAGGGCCCCTGGAGTCTGGTGGTaGCAGGGAATTCTCAGCGGCTTGTTTCCCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QRKHLRAPGVWW*QGILSGLFPTF Trigger: GAAGGTGGGAAACAAGCCGCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCTGAGGTGTTTCCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS CCA 72 bp | CAATCACCAGAGGAGTGGGCACAGAACGCAGCAGTTTaGGATGCTCTGCTGGAGGAGAGGGGGACATCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QSPEEWAQNAAV*DALLEERGTSA Trigger: AGCTGATGTCCCCCTCTCCTCCAGCAGAGCATCCCAAACTGCTGCGTTCTGTGCCCACTCCTCTGGTGATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CCA 72 bp | TCCATTCCCCAGGCCTGCCTTCCTTTGAAGGGGATGTaGGAGACAGGGCTTCATTGCCCGCCAACTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SIPQACLPLKGM*ETGLHCPPTSQ Trigger: CTGAGAAGTTGGCGGGCAATGAAGCCCTGTCTCCCACATCCCCTTCAAAGGAAGGCAGGCCTGGGGAATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CCA 72 bp | GCTGACTGGGTCGTGTGTCGATGCCACACGCCGACATaGTCTCCGTTTCTAGAAGCTGGAGAAGTCGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ADWVVCRCHTPT*SPFLEAGEVGV Trigger: GACACCGACTTCTCCAGCTTCTAGAAACGGAGACCATGTCGGCGTGTGGCATCGACACACGACCCAGTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 72 bp | TTGGTCACGCTTATGTTGCTGGGGAAGCGATGGACCTaGGGTGCTGACTGGGTCGTGTGTCGATGCCACACG | + |
|
Preference number: 6 (lower is better) Translates to: LVTLMLLGKRWT*GADWVVCRCHT Trigger: CGTGTGGCATCGACACACGACCCAGTCAGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 90 bp | ACAGCCGCCTTGGAGATGGTCTTGTTGAAGTCCTTGCCTGCGCTGTaGGTCACGCTTATGTTGCTGGGGAAGCGATGGACCTTGGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TAALEMVLLKSLPAL*VTLMLLGKRWTLGA Trigger: AGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAGACCATCTCCAAGGCGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 90 bp | TGGGCCTTGCGCTCCTGCACATTGACAGCCGCCTTGGAGATGGTCTaGTTGAAGTCCTTGCCTGCGCTGTTGGTCACGCTTATGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WALRSCTLTAALEMV*LKSLPALLVTLMLL Trigger: CAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAGACCATCTCCAAGGCGGCTGTCAATGTGCAGGAGCGCAAGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS TCA 72 bp | GAAGGGCTCTCTTCCAGAGACTGTGGAGAGTGGCAGTaGATGCCACTGTCACACAGGGCTGGCTCGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EGLSSRDCGEWQ*MPLSHRAGSSK Trigger: CTTTGACGAGCCAGCCCTGTGTGACAGTGGCATTCACTGCCACTCTCCACAGTCTCTGGAAGAGAGCCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS GCA 72 bp | AGCCGCCTTGGAGATGGTCTTGTTGAAGTCCTTGCCTaGGCTGTTGGTCACGCTTATGTTGCTGGGGAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SRLGDGLVEVLA*AVGHAYVAGEA Trigger: CGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAGACCATCTCCAAGGCGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 72 bp | TTGAAGTCCTTGCCTGCGCTGTTGGTCACGCTTATGTaGCTGGGGAAGCGATGGACCTTGGGTGCTGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKSLPALLVTLM*LGKRWTLGADW Trigger: CCAGTCAGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 72 bp | CGCTCCTGCACATTGACAGCCGCCTTGGAGATGGTCTaGTTGAAGTCCTTGCCTGCGCTGTTGGTCACGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSCTLTAALEMV*LKSLPALLVTL Trigger: AAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAGACCATCTCCAAGGCGGCTGTCAATGTGCAGGAGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 90 bp | ATGGTCTTGTTGAAGTCCTTGCCTGCGCTGTTGGTCACGCTTATGTaGCTGGGGAAGCGATGGACCTTGGGTGCTGACTGGGTCGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: MVLLKSLPALLVTLM*LGKRWTLGADWVVC Trigger: ACACACGACCCAGTCAGCACCCAAGGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAGACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 90 bp | TCCTGCACATTGACAGCCGCCTTGGAGATGGTCTTGTTGAAGTCCTaGCCTGCGCTGTTGGTCACGCTTATGTTGCTGGGGAAGCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: SCTLTAALEMVLLKS*PALLVTLMLLGKRW Trigger: CCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAGACCATCTCCAAGGCGGCTGTCAATGTGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CCA 72 bp | GGCTGCACTAAATCGATGACATCTTCGGGCTCAGAGTaGCTGGAAGGGCTCTCTTCCAGAGACTGTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GCTKSMTSSGSE*LEGLSSRDCGE Trigger: CTCTCCACAGTCTCTGGAAGAGAGCCCTTCCAGCCACTCTGAGCCCGAAGATGTCATCGATTTAGTGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS CAA 72 bp | TTGACAGCCGCCTTGGAGATGGTCTTGTTGAAGTCCTaGCCTGCGCTGTTGGTCACGCTTATGTTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LTAALEMVLLKS*PALLVTLMLLG Trigger: CCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAGACCATCTCCAAGGCGGCTGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 72 bp | TTGGAGATGGTCTTGTTGAAGTCCTTGCCTGCGCTGTaGGTCACGCTTATGTTGCTGGGGAAGCGATGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LEMVLLKSLPAL*VTLMLLGKRWT Trigger: GGTCCATCGCTTCCCCAGCAACATAAGCGTGACCAACAGCGCAGGCAAGGACTTCAACAAGACCATCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS CAA 90 bp | CTCAGGGCCCCTGGAGTCTGGTGGTGGCAGGGAATTCTCAGCGGCTaGTTTCCCACCTTCAAGAAATGGAGTGCCATGTTTTGTATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRAPGVWWWQGILSG*FPTFKKWSAMFCIR Trigger: TCTGATACAAAACATGGCACTCCATTTCTTGAAGGTGGGAAACAAGCCGCTGAGAATTCCCTGCCACCACCAGACTCCAGGGGCCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS CAA 72 bp | CCTGGAGTCTGGTGGTGGCAGGGAATTCTCAGCGGCTaGTTTCCCACCTTCAAGAAATGGAGTGCCATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: PGVWWWQGILSG*FPTFKKWSAMF Trigger: AAACATGGCACTCCATTTCTTGAAGGTGGGAAACAAGCCGCTGAGAATTCCCTGCCACCACCAGACTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS CCA 72 bp | TGGAGAGTGGCAGTGAATGCCACTGTCACACAGGGCTaGCTCGTCAAAGTCATATTCCAGGGAATCAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: WRVAVNATVTQG*LVKVIFQGIKS Trigger: ACTCTTGATTCCCTGGAATATGACTTTGACGAGCCAGCCCTGTGTGACAGTGGCATTCACTGCCACTCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS CAA 90 bp | TCTCAGCGGCTTGTTTCCCACCTTCAAGAAATGGAGTGCCATGTTTaGTATCAGATGGGGCCCCTGTTACTTGAGGCATATCTGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SQRLVSHLQEMECHV*YQMGPLLLEAYLEG Trigger: GCCTTCCAGATATGCCTCAAGTAACAGGGGCCCCATCTGATACAAAACATGGCACTCCATTTCTTGAAGGTGGGAAACAAGCCGCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
||
| CDS CCA 72 bp | ACTTCTCAGATATTTTCTGAGCAATCACCAGAGGAGTaGGCACAGAACGCAGCAGTTTGGGATGCTCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TSQIFSEQSPEE*AQNAAVWDALL Trigger: CAGCAGAGCATCCCAAACTGCTGCGTTCTGTGCCCACTCCTCTGGTGATTGCTCAGAAAATATCTGAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | CTTCCTTTGAAGGGGATGTGGGAGACAGGGCTTCATTaGCCGCCAACTTCTCAGATATTTTCTGAGCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLKGMWETGLH*PPTSQIFSEQS Trigger: TGATTGCTCAGAAAATATCTGAGAAGTTGGCGGGCAATGAAGCCCTGTCTCCCACATCCCCTTCAAAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 |
||
| CDS GCA 72 bp | AAGAACAGGATAACGTCCTTTTCCTCATGTGTGAGGTaGTTCAGGCTCTCGTCATCCATAGTGAAACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: KNRITSFSSCVR*FRLSSSIVKLL Trigger: CAGAAGTTTCACTATGGATGACGAGAGCCTGAAGCACCTCACACATGAGGAAAAGGACGTTATCCTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054254.12 ENSMUST00000114942.9 ENSMUST00000126551.2 |
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