Pregenerated sensors for PROSER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049504Ensembl transcript IDs: ENSMUST00000058577.5
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATGATGGTGGGTCACCTCCCACCAGCACGGGTCCTAGCGCACACTaGACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATT | + |
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Preference number: 1 (lower is better) Translates to: DDGGSPPTSTGPSAH*THRQHTSSLLLPHI Trigger: AATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGTGCTGGTGGGAGGTGACCCACCATCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR GCA 90 bp | CTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTaGCGCACATTCACTTCAGATGAGTGTGTGAGTGGAAAGACATCC | + |
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Preference number: 1 (lower is better) Translates to: LAHTAHTDSTRLLSC*RTFTSDECVSGKTS Trigger: GGATGTCTTTCCACTCACACACTCATCTGAAGTGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR GCA 90 bp | GTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTaGTGCCGCACATTCACTTCAGATGAGTGTGTGAGTGGAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: VLAHTAHTDSTRLLS*CRTFTSDECVSGKT Trigger: TGTCTTTCCACTCACACACTCATCTGAAGTGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR GCA 90 bp | AACTCTTTCAAACTATTGGCCAATGTCATCTGTCAGATTGTTCACTaGAGTTCTTGGGTAAATCTCATGTTGCTCCCAAGAAGAATAAAC | + |
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Preference number: 1 (lower is better) Translates to: NSFKLLANVICQIVH*SSWVNLMLLPRRIN Trigger: GTTTATTCTTCTTGGGAGCAACATGAGATTTACCCAAGAACTGCAGTGAACAATCTGACAGATGACATTGGCCAATAGTTTGAAAGAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR CCA 90 bp | AAACTATTGGCCAATGTCATCTGTCAGATTGTTCACTGCAGTTCTTaGGTAAATCTCATGTTGCTCCCAAGAAGAATAAACCCCTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: KLLANVICQIVHCSS*VNLMLLPRRINPFK Trigger: TTTAAAGGGGTTTATTCTTCTTGGGAGCAACATGAGATTTACCCAAGAACTGCAGTGAACAATCTGACAGATGACATTGGCCAATAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR CCA 90 bp | ATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGTaGATACATATAGAATACTGTGTTCCAATTGATGCTAACATGCAT | + |
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Preference number: 1 (lower is better) Translates to: IGNKLKVTVASSPEL*IHIEYCVPIDANMH Trigger: ATGCATGTTAGCATCAATTGGAACACAGTATTCTATATGTATCCACAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR-3UTR TCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCTTCAGATGAGTGTGTaGGTGGAAAGACATCCCATG | + |
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Preference number: 2 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLLQMSV*VERHPM Trigger: CATGGGATGTCTTTCCACTCACACACTCATCTGAAG...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR-3UTR CCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCAGTTCACTGCAGTTCTTaGGTAAATCTCATGTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSVHCSS*VNLMLL Trigger: GAGCAACATGAGATTTACCCAAGAACTGCAGTGAAC...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR-3UTR CCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGACTCTTTCAAACTATTaGCCAATGTCATCTGTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLTLSNY*PMSSVR Trigger: TCTGACAGATGACATTGGCCAATAGTTTGAAAGAGT...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR-3UTR CCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCATCAAGCCCCGAGTTGTaGATACATATAGAATACTGT | + |
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Preference number: 2 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSSSPEL*IHIEYC Trigger: ACAGTATTCTATATGTATCCACAACTCGGGGCTTGA...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTTCAATAGTCTATGTGGATCATTCACATAATTCAAAGCTTACAGGAAGGGTCATCTTATTTACATaGGTCAGATTAAGGGTTCCG | + |
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Preference number: 2 (lower is better) Translates to: SSSIVYVDHSHNSKLTGRVILFT*VRLRVP Trigger: CGGAACCCTTAATCTGACCCATGTAAATAAGATGAC...CCTTCCTGTAAGCTTTGAATTATGTGAATGATCCACATAGACTATTGAAGAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR GCA 72 bp | GGGTCACCTCCCACCAGCACGGGTCCTAGCGCACACTaGACACACAGACAGCACACGTCTTCTCTCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: GSPPTSTGPSAH*THRQHTSSLLL Trigger: CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGTGCTGGTGGGAGGTGACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR GCA 72 bp | ACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTaGCGCACATTCACTTCAGATGAGTGTGTGAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: TAHTDSTRLLSC*RTFTSDECVSG Trigger: TCCACTCACACACTCATCTGAAGTGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR GCA 72 bp | CACACTGCACACACAGACAGCACACGTCTTCTCTCTTaGTGCCGCACATTCACTTCAGATGAGTGTGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: HTAHTDSTRLLS*CRTFTSDECVS Trigger: ACTCACACACTCATCTGAAGTGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR GCA 72 bp | AGAATAGCAACCCCCGCAGGGGTTAATAGTAACACATaGAGCCAGAGGTCCAACTATCACTTCTGTCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: RIATPAGVNSNT*SQRSNYHFCLW Trigger: CCACAGACAGAAGTGATAGTTGGACCTCTGGCTGCATGTGTTACTATTAACCCCTGCGGGGGTTGCTATTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR TCA 72 bp | TCTCTTGCTGCCGCACATTCACTTCAGATGAGTGTGTaGGTGGAAAGACATCCCATGACTGTAAACATTCAC | + |
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Preference number: 3 (lower is better) Translates to: SLAAAHSLQMSV*VERHPMTVNIH Trigger: GTGAATGTTTACAGTCATGGGATGTCTTTCCACTCACACACTCATCTGAAGTGAATGTGCGGCAGCAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR-3UTR CAA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACATGTCATCTGTCAGATaGTTCACTGCAGTTCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNMSSVR*FTAVLG Trigger: CCCAAGAACTGCAGTGAACAATCTGACAGATGACAT...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| 3UTR CCA 72 bp | AAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGTaGATACATATAGAATACTGTGTTCCAATTGATGCT | + |
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Preference number: 3 (lower is better) Translates to: KLKVTVASSPEL*IHIEYCVPIDA Trigger: AGCATCAATTGGAACACAGTATTCTATATGTATCCACAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCAGGGCGCCTGCAGCCCTaGGAACGAGGGCAGCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSGRLQP*ERGQRG Trigger: CCCACGCTGCCCTCGTTCCCAGGGCTGCAGGCGCCC...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR GCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGACGGTAGAGGGCGCCTaGAGCCCTGGGAACGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLTVEGA*SPGNEG Trigger: GCCCTCGTTCCCAGGGCTGCAGGCGCCCTCTACCGT...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | GCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCTGGGCACTGAGGTCGTaGGGTACCCACGGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: AHTAHTDSTRLLSCCRTFWALRS*GTHGPG Trigger: CCCTGGGCCGTGGGTACCCCACGACCTCAGTGCCCA...GAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGAAGGGGGAAGGGCAGTaGAGACAGGCGCGATGGGCG | + |
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Preference number: 4 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLKGEGQ*RQARWA Trigger: CGCCCATCGCGCCTGTCTTCACTGCCCTTCCCCCTT...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGTGCAGCAGGGGCAGATaGGATGCCACCTGCATGGGG | + |
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Preference number: 4 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLCSRGR*DATCMG Trigger: CCCCATGCAGGTGGCATCTCATCTGCCCCTGCTGCA...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR GCA 90 bp | GCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCGCTAGGAAAGCCGTCTaGCTGGGCCGGGTAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: AHTAHTDSTRLLSCCRTFARKAV*LGRVAL Trigger: GAGAGCTACCCGGCCCAGGCAGACGGCTTTCCTAGC...GAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | GCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCTGGGTAGGGTGGGGGTaGCAGATAGACCGGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AHTAHTDSTRLLSCCRTFWVGWG*QIDRAV Trigger: CACTGCCCGGTCTATCTGCCACCCCCACCCTACCCA...GAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCAGGTGGACAGGTTGAGTaGGAAGGCCGCAGGCGAGGC | + |
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Preference number: 4 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSGGQVE*EGRRRG Trigger: GCCTCGCCTGCGGCCTTCCCACTCAACCTGTCCACC...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCTTTGCAGCCCGCCTTaGAAGCCTGCTCCAGGACTC | + |
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Preference number: 4 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLLCSPP*KPAPGL Trigger: GAGTCCTGGAGCAGGCTTCCAAGGCGGGCTGCAAAG...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCATGGAGTGTACGGAGGTaGAGGAGGGACGCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSWSVRR*RRDAWS Trigger: GCTCCAGGCGTCCCTCCTCCACCTCCGTACACTCCA...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCACCTGAGTGGGTAGGGTaGGGGTGGCAGATAGACCGG | + |
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Preference number: 4 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSPEWVG*GWQIDR Trigger: CCGGTCTATCTGCCACCCCCACCCTACCCACTCAGG...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGAAGCCAGTCCACTTGTaGCTGCAGATGGCAAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLKPVHL*LQMARR Trigger: CCGCCTTGCCATCTGCAGTCACAAGTGGACTGGCTT...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR GCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGACTTGGTGCGATAGTTaGATGCGGCCGGCATGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLTWCDS*MRPAWR Trigger: CCTCCATGCCGGCCGCATGCAACTATCGCACCAAGT...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | GCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCCAGAAGGAGTCGGGGTaGCTATGCTGTGGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: AHTAHTDSTRLLSCCRTFQKESG*LCCGML Trigger: CAGCATCCCACAGCATAGCCACCCCGACTCCTTCTG...GAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGTTTGAAGGCCGAGGGTaGGGGACTTGTGGGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLFEGRG*GTCGLT Trigger: AGTGAGCCCACAAGTCCCCCACCCTCGGCCTTCAAA...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | GCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCCACTGGAAGCCAGAGTaGCCCTTGATATCGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: AHTAHTDSTRLLSCCRTFHWKPE*PLISSW Trigger: CCAGCTCGATATCAAGGGTCACTCTGGCTTCCAGTG...GAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCAGATTGGGTTACTGGCTaGCCCAGCAGTAGAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSDWVTG*PSSRAG Trigger: GCCAGCTCTACTGCTGGGTCAGCCAGTAACCCAATC...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | GCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCAGACACAGCAGGTACTaGAGTCGCAGCAGGTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: AHTAHTDSTRLLSCCRTFRHSRY*SRSRCR Trigger: TCGACACCTGCTGCGACTCCAGTACCTGCTGTGTCT...GAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCATGCGTCCACAATGTTTaGGGCCAAGAGCTCCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSCVHNV*GQELQS Trigger: GCTCTGGAGCTCTTGGCCTCAAACATTGTGGACGCA...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCACGGCCCAGGGCACCTaGCAGGCCCAAGGTACCACG | + |
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Preference number: 4 (lower is better) Translates to: VEAIQADLRLCSAIKTSVTAQGT*QAQGTT Trigger: CGTGGTACCTTGGGCCTGTCAGGTGCCCTGGGCCGT...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGACCACTTCTGCTGGGTaGACGGCCACCATTTTATGC | + |
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Preference number: 4 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLTTSAG*TATILC Trigger: GCATAAAATGGTGGCCGTCCACCCAGCAGAAGTGGT...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCAGAGCTACCCGCAGCTTaGAGTCCTGATGACAAACCG | + |
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Preference number: 4 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSELPAA*SPDDKP Trigger: CGGTTTGTCATCAGGACTCCAAGCTGCGGGTAGCTC...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCAGAGGGACAGAAGGCCTaGAAAAACAGAGCTACCCGC | + |
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Preference number: 4 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSEGQKA*KNRATR Trigger: GCGGGTAGCTCTGTTTTTCCAGGCCTTCTGTCCCTC...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACGGTGAGCTGGGCCTTTaGAGGCCGAGGGTGGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNGELGL*RPRVGD Trigger: GTCCCCCACCCTCGGCCTTCAAAGGCCCAGCTCACC...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACCAGCGGTGGACAGGTTaGGTGGGAAGGCCGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNQRWTG*VGRPQA Trigger: CGCCTGCGGCCTTCCCACTCAACCTGTCCACCGCTG...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCGGAGCCACAGCTGACTaGCACTGCCGTGGAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VEAIQADLRLCSAIKTSVGATAD*HCRGGG Trigger: ACCCCCTCCACGGCAGTGCCAGTCAGCTGTGGCTCC...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CCA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCAGTCCCGGGGTGAGCTaGGCCTTTGAAGGCCGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VEAIQADLRLCSAIKTSVSPGVS*AFEGRG Trigger: CCCTCGGCCTTCAAAGGCCCAGCTCACCCCGGGACT...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCGATATCGAGCTGGCCTaGGTGGGTAGGGTGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VEAIQADLRLCSAIKTSVDIELA*VGRVGV Trigger: CACCCCCACCCTACCCACTCAGGCCAGCTCGATATC...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCAGTGTGGATTGTATGTTaGAGGAGGTGGTTTGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSVWIVC*RRWFGW Trigger: CCATCCAAACCACCTCCTTCAACATACAATCCACAC...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR TCA 90 bp | GCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCACTCTGTGTAGGTTTTaGCTGACTGGAAAGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AHTAHTDSTRLLSCCRTFTLCRF*LTGKVF Trigger: GAAGACCTTTCCAGTCAGTCAAAACCTACACAGAGT...GAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR GCA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGTGGGATAGGCCTGTTTaGAGAGAAAATGGTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLWDRPV*RENGVP Trigger: AGGAACACCATTTTCTCTGCAAACAGGCCTATCCCA...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR TCA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCAGAAACTATTAGTCAATaGAGTGAAAGGGGGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSETISQ*SERGKG Trigger: GCCCTTCCCCCTTTCACTTCATTGACTAATAGTTTC...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR GCA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACCAGGGGCAGATGAGATaGCACCTGCATGGGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNQGQMR*HLHGDR Trigger: ACGGTCCCCATGCAGGTGGCATCTCATCTGCCCCTG...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCCGGGTTTGGCGTGTTTaGCTGAGGCGTTGGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: VEAIQADLRLCSAIKTSVRVWRV*LRRWEH Trigger: GTGTTCCCAACGCCTCAGCCAAACACGCCAAACCCG...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACCTGTGCAGGCAGCGTTaGGGCTACAGACGTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNLCRQR*GYRRGT Trigger: AGTGCCACGTCTGTAGCCCCAACGCTGCCTGCACAG...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTTCGGCTATAAAGACTTCAGTCTCCTCTTCAATAGTCTATGTGGATCAAGCCGAGGCAGCCACTaGCAACGGGGTAACTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AVFGYKDFSLLFNSLCGSSRGSH*QRGNCH Trigger: GTGGCAGTTACCCCGTTGCCAGTGGCTGCCTCGGCT...TGATCCACATAGACTATTGAAGAGGAGACTGAAGTCTTTATAGCCGAACACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCTATGCTGTGGGATGCTaGTGGGAAGGGCAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VEAIQADLRLCSAIKTSVYAVGC*WEGQRQ Trigger: CTGCCTTTGCCCTTCCCACCAGCATCCCACAGCATA...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACTTGCAGGGACGACTGTaGAGGAGCCTGGGAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNLQGRL*RSLGKP Trigger: GGGTTTTCCCAGGCTCCTCCACAGTCGTCCCTGCAA...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACCCGGCATGGAGGAATTaGGTAGGGGACAGGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNPAWRN*VGDRFV Trigger: CACAAACCTGTCCCCTACCCAATTCCTCCATGCCGG...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTTCGGCTATAAAGACTTCAGTCTCCTCTTCAATAGTCTATGTGGATCAGGAGTGGCCGGAGAATaGGGCACACGTGGAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AVFGYKDFSLLFNSLCGSGVAGE*GTRGSK Trigger: TTTGCTTCCACGTGTGCCCCATTCTCCGGCCACTCC...TGATCCACATAGACTATTGAAGAGGAGACTGAAGTCTTTATAGCCGAACACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTCAATAGTCTATGTGGATCATTCACATAATTCAAAGCTTACAGGAAGGCACCGCTTGGGGCACTaGAGACAGGGAAGCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSSIVYVDHSHNSKLTGRHRLGH*RQGSRG Trigger: ACCCCGGCTTCCCTGTCTCCAGTGCCCCAAGCGGTG...CCTTCCTGTAAGCTTTGAATTATGTGAATGATCCACATAGACTATTGAAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGGACAGGTGCAGGCGATaGAGCCGAGGCAGCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HMTIGNKLKVTVASSPELDRCRR*SRGSHW Trigger: CCAGTGGCTGCCTCGGCTCCATCGCCTGCACCTGTC...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR TCA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCCGAGGCAGGAGAATCTaGGTTTCGATTGGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VEAIQADLRLCSAIKTSVRGRRI*VSIGKR Trigger: TCTCTTCCCAATCGAAACTCAGATTCTCCTGCCTCG...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR TCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAACTGAGGAGCCACAGCTaGCTGGCACTGCCGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQLRSHS*LALPWR Trigger: CCTCCACGGCAGTGCCAGTCAGCTGTGGCTCCTCAG...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR GCA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCACGGCCACCATTTTATaGTGGAGTGCTTTCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VEAIQADLRLCSAIKTSVTATIL*WSAFMA Trigger: GGCCATGAAAGCACTCCAGCATAAAATGGTGGCCGT...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCCACACGAAGAAATCATaGCATGAGGGGCTTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VEAIQADLRLCSAIKTSVHTKKS*HEGLCS Trigger: GCTGCAAAGCCCCTCATGCCATGATTTCTTCGTGTG...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACTGTTCCTGCTGGATTTaGAGTGTACGGAGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNCSCWI*SVRRWR Trigger: CCTCCACCTCCGTACACTCCAAATCCAGCAGGAACA...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTCAATAGTCTATGTGGATCATTCACATAATTCAAAGCTTACAGGAAGGTGGCCAGCCCTGGGGTaGAAGACCTCTGTGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIVYVDHSHNSKLTGRWPALG*KTSVQQ Trigger: CTGCTGCACAGAGGTCTTCCACCCCAGGGCTGGCCA...CCTTCCTGTAAGCTTTGAATTATGTGAATGATCCACATAGACTATTGAAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGGCAGGCCTGGAAACATaGCCAGCCCTGGGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HMTIGNKLKVTVASSPELAGLET*PALGWK Trigger: CTTCCACCCCAGGGCTGGCCATGTTTCCAGGCCTGC...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGACGGGGTGCTCAGGCTaGAGAGCCCAGACAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HMTIGNKLKVTVASSPELTGCSG*RAQTVQ Trigger: CTGCACTGTCTGGGCTCTCCAGCCTGAGCACCCCGT...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTCAATAGTCTATGTGGATCATTCACATAATTCAAAGCTTACAGGAAGGGTGGGTAGCGGGCCCTaGGTGACAGCAAAGAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIVYVDHSHNSKLTGRVGSGP*VTAKSE Trigger: CTCGCTCTTTGCTGTCACCCAGGGCCCGCTACCCAC...CCTTCCTGTAAGCTTTGAATTATGTGAATGATCCACATAGACTATTGAAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR GCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAAGGGCAAAGGCAGACCTaGGAAGACCGACGAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQGQRQT*EDRREG Trigger: CCCCTCTCGTCGGTCTTCGCAGGTCTGCCTTTGCCC...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTTCGGCTATAAAGACTTCAGTCTCCTCTTCAATAGTCTATGTGGATCAGTTTACTGCCTTGGCTaGAGACACAGCAGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVFGYKDFSLLFNSLCGSVYCLG*RHSRYW Trigger: CCAGTACCTGCTGTGTCTCCAGCCAAGGCAGTAAAC...TGATCCACATAGACTATTGAAGAGGAGACTGAAGTCTTTATAGCCGAACACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTTCGGCTATAAAGACTTCAGTCTCCTCTTCAATAGTCTATGTGGATCAGCTGACACGGATGGATaGTTTACTGCCTTGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVFGYKDFSLLFNSLCGSADTDG*FTALAG Trigger: TCCAGCCAAGGCAGTAAACCATCCATCCGTGTCAGC...TGATCCACATAGACTATTGAAGAGGAGACTGAAGTCTTTATAGCCGAACACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAAGGGGTGGCTATGCTGTaGGATGCTGGTGGGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQGVAML*DAGGKG Trigger: GCCCTTCCCACCAGCATCCCACAGCATAGCCACCCC...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR TCA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACCAGGGAAAATTCCATTaGTGCGACTGGGTTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNQGKFH*CDWVCL Trigger: AAGGCAAACCCAGTCGCATCAATGGAATTTTCCCTG...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR TCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAAAGCAGTAGAGCTGGCTaGGGAGTGGCCGGAGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQSSRAG*GVAGEW Trigger: CCATTCTCCGGCCACTCCTCAGCCAGCTCTACTGCT...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR TCA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGGTTGGAACTGAAGGCTaGGGCAAATCCCGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HMTIGNKLKVTVASSPELVGTEG*GKSRED Trigger: GTCCTCCCGGGATTTGCCTCAGCCTTCAGTTCCAAC...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGCATGGCCTTCAGCTGTaGCTCGGCCCAGGAGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HMTIGNKLKVTVASSPELHGLQL*LGPGEV Trigger: TACTTCTCCTGGGCCGAGCCACAGCTGAAGGCCATG...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAATGCATGCGGCCGGCATaGAGGAATTGGGTAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQCMRPA*RNWVGD Trigger: GTCCCCTACCCAATTCCTCCATGCCGGCCGCATGCA...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | GCTGTGTTCGGCTATAAAGACTTCAGTCTCCTCTTCAATAGTCTATGTGGATCAGCTGACTCGCAGGGGTaGAAAATGTTTGACTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVFGYKDFSLLFNSLCGSADSQG*KMFDSV Trigger: CACAGAGTCAAACATTTTCCACCCCTGCGAGTCAGC...TGATCCACATAGACTATTGAAGAGGAGACTGAAGTCTTTATAGCCGAACACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR TCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAAGAAGAAATCATGGCATaGGGGGCTTTGCAGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQEEIMA*GALQPA Trigger: GGCGGGCTGCAAAGCCCCTCATGCCATGATTTCTTC...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR GCA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGGGTGCGATAGTTGCATaGGGCCGGCATGGAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: HMTIGNKLKVTVASSPELGAIVA*GRHGGI Trigger: AATTCCTCCATGCCGGCCGCATGCAACTATCGCACC...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR GCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAACTAGCCACAGGAGACTaGAGGCCTGGAAACATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQLATGD*RPGNMA Trigger: GGCCATGTTTCCAGGCCTGCAGTCTCCTGTGGCTAG...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR GCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAACCTGCATGGGGACCGTaGAAAAGTGAGCCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQPAWGP*KSEPEE Trigger: CTCCTCAGGCTCACTTTTGCACGGTCCCCATGCAGG...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGGTGGACCCGCAGCACTaGCAATTACAGAAGGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HMTIGNKLKVTVASSPELVDPQH*QLQKES Trigger: CGACTCCTTCTGTAATTGCCAGTGCTGCGGGTCCAC...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR TCA 90 bp | GCTGTGTTCGGCTATAAAGACTTCAGTCTCCTCTTCAATAGTCTATGTGGATCAGCAAGGCGGAGGAATTaGTTAAGTGTGTGTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVFGYKDFSLLFNSLCGSARRRN*LSVCHL Trigger: CAAATGACACACACTTAATCAATTCCTCCGCCTTGC...TGATCCACATAGACTATTGAAGAGGAGACTGAAGTCTTTATAGCCGAACACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGCTGGAGCGATCACATTaGCTAATGGTACCAGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: HMTIGNKLKVTVASSPELLERSH*LMVPDP Trigger: CGGGTCTGGTACCATTAGCCAATGTGATCGCTCCAG...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | TCCTCTTCAATAGTCTATGTGGATCATTCACATAATTCAAAGCTTACAGGAAGGAGAATGGGGCACACGTaGAAGCAAATGTCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSIVYVDHSHNSKLTGRRMGHT*KQMSHW Trigger: CCAGTGAGACATTTGCTTCCACGTGTGCCCCATTCT...CCTTCCTGTAAGCTTTGAATTATGTGAATGATCCACATAGACTATTGAAGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGGCCACCATTTTATGCTaGAGTGCTTTCATGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HMTIGNKLKVTVASSPELATILC*SAFMAF Trigger: GAAGGCCATGAAAGCACTCCAGCATAAAATGGTGGC...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAAGATGGTTTACTGCCTTaGCTGGAGACACAGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQDGLLP*LETQQV Trigger: TACCTGCTGTGTCTCCAGCCAAGGCAGTAAACCATC...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAAAGAAAATGGTGTTCCTaGCGTGGAGGGATAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQRKWCS*RGGIAR Trigger: CCTAGCTATCCCTCCACGCCAGGAACACCATTTTCT...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAATGTTTGCAGAGAAAATaGTGTTCCTGGCGTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQCLQRK*CSWRGG Trigger: CCCTCCACGCCAGGAACACCATTTTCTCTGCAAACA...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGTGTGTAGGTTTTGACTaGCTGGAAAGGTCTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: HMTIGNKLKVTVASSPELCVGFD*LERSSL Trigger: CAATGAAGACCTTTCCAGTCAGTCAAAACCTACACA...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR TCA 90 bp | CTTATTTACATGGGTCAGATTAAGGGTTCCGATATAACCACTTTCAAAACACAACTGGAGAAGTACCCATaGACATACTCAATTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LIYMGQIKGSDITTFKTQLEKYP*TYSIAF Trigger: AAAAGCAATTGAGTATGTTCATGGGTACTTCTCCAG...TTGTGTTTTGAAAGTGGTTATATCGGAACCCTTAATCTGACCCATGTAAATAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | GGGCGCCTGCAGCCCTGGGAACGAGGGCAGCGTGGGGGCACCGCTTaGGGCACTGGAGACAGGGAAGCCGGGGTAGGACGGGTTAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRLQPWERGQRGGTA*GTGDREAGVGRVRG Trigger: ACCTCTAACCCGTCCTACCCCGGCTTCCCTGTCTCCAGTGCCCCAAGCGGTGCCCCCACGCTGCCCTCGTTCCCAGGGCTGCAGGCGCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | AAATCCCGGGAGGACAGGTGCAGGCGATGGAGCCGAGGCAGCCACTaGCAACGGGGTAACTGCCACGGTAGAGGGCGCCTGCAGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSREDRCRRWSRGSH*QRGNCHGRGRLQPW Trigger: CCAGGGCTGCAGGCGCCCTCTACCGTGGCAGTTACCCCGTTGCCAGTGGCTGCCTCGGCTCCATCGCCTGCACCTGTCCTCCCGGGATTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS TCA 90 bp | AGGGCACCTGACAGGCCCAAGGTACCACGAACAGGAGTCCCGGGGTaGGCTGGGCCTTTGAAGGCCGAGGGTGGGGGACTTGTGGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RAPDRPKVPRTGVPG*AGPLKAEGGGLVGS Trigger: TGAGCCCACAAGTCCCCCACCCTCGGCCTTCAAAGGCCCAGCTCACCCCGGGACTCCTGTTCGTGGTACCTTGGGCCTGTCAGGTGCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS TCA 90 bp | ACCGGCTTGTGCCACCAGGGCGGAGTTGAAGTTGGAACTGAAGGCTaGGGCAAATCCCGGGAGGACAGGTGCAGGCGATGGAGCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGLCHQGGVEVGTEG*GKSREDRCRRWSRG Trigger: GCCTCGGCTCCATCGCCTGCACCTGTCCTCCCGGGATTTGCCTCAGCCTTCAGTTCCAACTTCAACTCCGCCCTGGTGGCACAAGCCGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | TTGGCGTGTTTGGCTGAGGCGTTGGGAACACCGCCAGGGCAGTGTTaGTCGCACTCATTCCAGCCCCGGTGGCAGCTGCTGACACGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LACLAEALGTPPGQC*SHSFQPRWQLLTRM Trigger: CATCCGTGTCAGCAGCTGCCACCGGGGCTGGAATGAGTGCGACCAACACTGCCCTGGCGGTGTTCCCAACGCCTCAGCCAAACACGCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | GGGAGTCCGGATCACAGTCGGGTTTGGCGTGTTTGGCTGAGGCGTTaGGAACACCGCCAGGGCAGTGTTGGTCGCACTCATTCCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSPDHSRVWRVWLRR*EHRQGSVGRTHSSP Trigger: GGGGCTGGAATGAGTGCGACCAACACTGCCCTGGCGGTGTTCCCAACGCCTCAGCCAAACACGCCAAACCCGACTGTGATCCGGACTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | GGCACTAGCCACAGGAGACTGCAGGCCTGGAAACATGGCCAGCCCTaGGGTGGAAGACCTCTGTGCAGCAGGAACAGCCGCAGGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: GTSHRRLQAWKHGQP*GGRPLCSRNSRRGI Trigger: TATCCCCCTGCGGCTGTTCCTGCTGCACAGAGGTCTTCCACCCCAGGGCTGGCCATGTTTCCAGGCCTGCAGTCTCCTGTGGCTAGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | CGTTGGGGCTACAGACGTGGCACTAGCCACAGGAGACTGCAGGCCTaGAAACATGGCCAGCCCTGGGGTGGAAGACCTCTGTGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWGYRRGTSHRRLQA*KHGQPWGGRPLCSR Trigger: CCTGCTGCACAGAGGTCTTCCACCCCAGGGCTGGCCATGTTTCCAGGCCTGCAGTCTCCTGTGGCTAGTGCCACGTCTGTAGCCCCAACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 90 bp | CTGCAGGCCTGGAAACATGGCCAGCCCTGGGGTGGAAGACCTCTGTaGAGCAGGAACAGCCGCAGGGGGATAGCACTTGTTAGTGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LQAWKHGQPWGGRPL*SRNSRRGIALVSGR Trigger: TCGGCCACTAACAAGTGCTATCCCCCTGCGGCTGTTCCTGCTGCACAGAGGTCTTCCACCCCAGGGCTGGCCATGTTTCCAGGCCTGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | GGAACACCGCCAGGGCAGTGTTGGTCGCACTCATTCCAGCCCCGGTaGCAGCTGCTGACACGGATGGATGGTTTACTGCCTTGGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTPPGQCWSHSFQPR*QLLTRMDGLLPWLE Trigger: CTCCAGCCAAGGCAGTAAACCATCCATCCGTGTCAGCAGCTGCCACCGGGGCTGGAATGAGTGCGACCAACACTGCCCTGGCGGTGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS TCA 90 bp | CAGGGCAGTGTTGGTCGCACTCATTCCAGCCCCGGTGGCAGCTGCTaGCACGGATGGATGGTTTACTGCCTTGGCTGGAGACACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QGSVGRTHSSPGGSC*HGWMVYCLGWRHSR Trigger: CCTGCTGTGTCTCCAGCCAAGGCAGTAAACCATCCATCCGTGTCAGCAGCTGCCACCGGGGCTGGAATGAGTGCGACCAACACTGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | CAGCCCCGGTGGCAGCTGCTGACACGGATGGATGGTTTACTGCCTTaGCTGGAGACACAGCAGGTACTGGAGTCGCAGCAGGTGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPRWQLLTRMDGLLP*LETQQVLESQQVSK Trigger: CTTCGACACCTGCTGCGACTCCAGTACCTGCTGTGTCTCCAGCCAAGGCAGTAAACCATCCATCCGTGTCAGCAGCTGCCACCGGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | GGCAATTACAGAAGGAGTCGGGGTGGCTATGCTGTGGGATGCTGGTaGGAAGGGCAAAGGCAGACCTGCGAAGACCGACGAGAGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GNYRRSRGGYAVGCW*EGQRQTCEDRREGS Trigger: GCTCCCCTCTCGTCGGTCTTCGCAGGTCTGCCTTTGCCCTTCCCACCAGCATCCCACAGCATAGCCACCCCGACTCCTTCTGTAATTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | ACGGGCATAGTTGCTGCAGCAGGGGCAGATGAGATGCCACCTGCATaGGGACCGTGCAAAAGTGAGCCTGAGGAGCCACAGCTGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGIVAAAGADEMPPA*GPCKSEPEEPQLTG Trigger: GCCAGTCAGCTGTGGCTCCTCAGGCTCACTTTTGCACGGTCCCCATGCAGGTGGCATCTCATCTGCCCCTGCTGCAGCAACTATGCCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | CCTGGGAGGGACAGAAGGCCTGGAAAAACAGAGCTACCCGCAGCTTaGAGTCCTGATGACAAACCGGCTTGTGCCACCAGGGCGGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGRDRRPGKTELPAA*SPDDKPACATRAEL Trigger: CAACTCCGCCCTGGTGGCACAAGCCGGTTTGTCATCAGGACTCCAAGCTGCGGGTAGCTCTGTTTTTCCAGGCCTTCTGTCCCTCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCAGCCGCAGGCGAGGCATaGGAGGTGGGTAGCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSAAGEA*EVGSTE Trigger: CTCAGTGCTACCCACCTCCAATGCCTCGCCTGCGGC...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS TCA 90 bp | AATGTCTCACTGGAAGCCAGAGTGACCCTTGATATCGAGCTGGCCTaGGTGGGTAGGGTGGGGGTGGCAGATAGACCGGGCAGTGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: NVSLEARVTLDIELA*VGRVGVADRPGSGT Trigger: AGTGCCACTGCCCGGTCTATCTGCCACCCCCACCCTACCCACTCAGGCCAGCTCGATATCAAGGGTCACTCTGGCTTCCAGTGAGACATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | GCTGCACTGTGCTGTAACTCTTGCAGGGACGACTGTGGAGGAGCCTaGGAAAACCCAGGGATACCTGGGAGGGACAGAAGGCCTGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AALCCNSCRDDCGGA*ENPGIPGRDRRPGK Trigger: TTTTCCAGGCCTTCTGTCCCTCCCAGGTATCCCTGGGTTTTCCCAGGCTCCTCCACAGTCGTCCCTGCAAGAGTTACAGCACAGTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | ACGGGTCCTAGCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGAGGGTGGGGGACTaGTGGGCTCACTTTTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: TGPSAHCTHRQHTSSLLLPRVGD*WAHFLS Trigger: TGATAAAAAGTGAGCCCACAAGTCCCCCACCCTCGG...CAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGCTAGGACCCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCGCGTGGGGGCACCGCTaGGGGCACTGGAGACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VEAIQADLRLCSAIKTSVAWGHR*GHWRQG Trigger: TCCCTGTCTCCAGTGCCCCAAGCGGTGCCCCCACGC...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | TTGGAGTGTACGGAGGTGGAGGAGGGACGCCTGGAGCGATCACATTaGCTAATGGTACCAGACCCGCATTGTTGTAAGCACTTGGTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LECTEVEEGRLERSH*LMVPDPHCCKHLVR Trigger: TCGCACCAAGTGCTTACAACAATGCGGGTCTGGTACCATTAGCCAATGTGATCGCTCCAGGCGTCCCTCCTCCACCTCCGTACACTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | CGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCATCCAGAGCGGCCAGCTaGTCCTTACTAAAGGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: RTLHTQTAHVFSLAAAHSSRAAS*SLLKVK Trigger: TTTCACCTTTAGTAAGGACAAGCTGGCCGCTCTGGA...TGAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCACTGTGCAGGCAGCGTaGGGGCTACAGACGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VEAIQADLRLCSAIKTSVTVQAA*GLQTWH Trigger: GTGCCACGTCTGTAGCCCCAACGCTGCCTGCACAGT...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACACAGCGGTGGACAGGTaGAGTGGGAAGGCCGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNTAVDR*SGKAAG Trigger: GCCTGCGGCCTTCCCACTCAACCTGTCCACCGCTGT...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS TCA 90 bp | GCATGGAGGAATTGGGTAGGGGACAGGTTTGTGTGGATTGTATGTTaGAGGAGGTGGTTTGGATGGCCCGAGAATCCGAGCTGCTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWRNWVGDRFVWIVC*RRWFGWPENPSCYS Trigger: GGAATAGCAGCTCGGATTCTCGGGCCATCCAAACCACCTCCTTCAACATACAATCCACACAAACCTGTCCCCTACCCAATTCCTCCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | GCGCACACTGCACACACAGACAGCACACGTCTTCTCTCTTGCTGCCGCACATTCGAATCTGAGTTTCGATaGGGAAGAGAGGATAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AHTAHTDSTRLLSCCRTFESEFR*GREDSE Trigger: TTCACTATCCTCTCTTCCCAATCGAAACTCAGATTC...GAATGTGCGGCAGCAAGAGAGAAGACGTGTGCTGTCTGTGTGTGCAGTGTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCGCCACCAGGGCGGAGTaGAAGTTGGAACTGAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VEAIQADLRLCSAIKTSVATRAE*KLELKA Trigger: AGCCTTCAGTTCCAACTTCAACTCCGCCCTGGTGGC...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 90 bp | CTTGTCCTTACTAAAGGTGAAACAGCTCAAGATGCTCACCACTTCTaGTGGGTGGACGGCCACCATTTTATGCTGGAGTGCTTTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLTKGETAQDAHHF*WVDGHHFMLECFHG Trigger: GCCATGAAAGCACTCCAGCATAAAATGGTGGCCGTCCACCCAGCAGAAGTGGTGAGCATCTTGAGCTGTTTCACCTTTAGTAAGGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | TTACTAAAGGTGAAACAGCTCAAGATGCTCACCACTTCTGCTGGGTaGACGGCCACCATTTTATGCTGGAGTGCTTTCATGGCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLKVKQLKMLTTSAG*TATILCWSAFMAFS Trigger: GCTGAAGGCCATGAAAGCACTCCAGCATAAAATGGTGGCCGTCCACCCAGCAGAAGTGGTGAGCATCTTGAGCTGTTTCACCTTTAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | GTCCTTACTAAAGGTGAAACAGCTCAAGATGCTCACCACTTCTGCTaGGTGGACGGCCACCATTTTATGCTGGAGTGCTTTCATGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VLTKGETAQDAHHFC*VDGHHFMLECFHGL Trigger: AAGGCCATGAAAGCACTCCAGCATAAAATGGTGGCCGTCCACCCAGCAGAAGTGGTGAGCATCTTGAGCTGTTTCACCTTTAGTAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 90 bp | AATTCCATTGATGCGACTGGGTTTGCCTTTGGGATAGGGGTTTCCTaGGAAGGTTCCACACGAAGAAATCATGGCATGAGGGGCTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NSIDATGFAFGIGVS*EGSTRRNHGMRGFA Trigger: TGCAAAGCCCCTCATGCCATGATTTCTTCGTGTGGAACCTTCCCAGGAAACCCCTATCCCAAAGGCAAACCCAGTCGCATCAATGGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | GTGGAGGCAATACAAGCAGACTTAAGGCTGTGTTCGGCTATAAAGACTTCAGTCGTTGAAGGAGGTGGTTaGGATGGCCCGAGAATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: VEAIQADLRLCSAIKTSVVEGGG*DGPRIR Trigger: TCGGATTCTCGGGCCATCCAAACCACCTCCTTCAAC...GACTGAAGTCTTTATAGCCGAACACAGCCTTAAGTCTGCTTGTATTGCCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | GCTGTGTTCGGCTATAAAGACTTCAGTCTCCTCTTCAATAGTCTATGTGGATCAGCCGGCATGGAGGAATaGGGTAGGGGACAGGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AVFGYKDFSLLFNSLCGSAGMEE*GRGQVC Trigger: ACAAACCTGTCCCCTACCCAATTCCTCCATGCCGGC...TGATCCACATAGACTATTGAAGAGGAGACTGAAGTCTTTATAGCCGAACACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | TATAACCACTTTCAAAACACAACCTGTGTCTCTGTCCCTGTGTCCCTAAGGAACCCTGGAGCGATCACATaGGCTAATGGTACCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: YNHFQNTTCVSVPVSLRNPGAIT*ANGTRP Trigger: GGGTCTGGTACCATTAGCCAATGTGATCGCTCCAGG...GTTCCTTAGGGACACAGGGACAGAGACACAGGTTGTGTTTTGAAAGTGGTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | CATATGACTATTGGTAATAAATTAAAAGTAACAGTTGCCTCAAGCCCCGAGTTGAGGGATACAGCAGGATaGAGGGAGGGACTGCCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HMTIGNKLKVTVASSPELRDTAG*REGLPG Trigger: ACCGGGCAGTCCCTCCCTCAATCCTGCTGTATCCCT...CAACTCGGGGCTTGAGGCAACTGTTACTTTTAATTTATTACCAATAGTCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | GCTGTGTTCGGCTATAAAGACTTCAGTCTCCTCTTCAATAGTCTATGTGGATCACCAGGGAAAATTCCATaGATGCGACTGGGTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AVFGYKDFSLLFNSLCGSPGKIP*MRLGLP Trigger: AGGCAAACCCAGTCGCATCAATGGAATTTTCCCTGG...TGATCCACATAGACTATTGAAGAGGAGACTGAAGTCTTTATAGCCGAACACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | TCCTCTTCAATAGTCTATGTGGATCATTCACATAATTCAAAGCTTACAGGAAGGGTGCGTCCACAATGTTaGAGGCCAAGAGCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSIVYVDHSHNSKLTGRVRPQC*RPRAPE Trigger: CTCTGGAGCTCTTGGCCTCAAACATTGTGGACGCAC...CCTTCCTGTAAGCTTTGAATTATGTGAATGATCCACATAGACTATTGAAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | TCCTCTTCAATAGTCTATGTGGATCATTCACATAATTCAAAGCTTACAGGAAGGAGGGCGGAGTTGAAGTaGGAACTGAAGGCTGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSIVYVDHSHNSKLTGRRAELK*ELKAEA Trigger: TGCCTCAGCCTTCAGTTCCAACTTCAACTCCGCCCT...CCTTCCTGTAAGCTTTGAATTATGTGAATGATCCACATAGACTATTGAAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS-3UTR CAA 90 bp | TCCTCTTCAATAGTCTATGTGGATCATTCACATAATTCAAAGCTTACAGGAAGGACAGGTTTGTGTGGATaGTATGTTGAAGGAGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSIVYVDHSHNSKLTGRTGLCG*YVEGGG Trigger: ACCACCTCCTTCAACATACAATCCACACAAACCTGT...CCTTCCTGTAAGCTTTGAATTATGTGAATGATCCACATAGACTATTGAAGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | CAGCCCTGGGAACGAGGGCAGCGTGGGGGCACCGCTTaGGGCACTGGAGACAGGGAAGCCGGGGTAGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: QPWERGQRGGTA*GTGDREAGVGR Trigger: CCGTCCTACCCCGGCTTCCCTGTCTCCAGTGCCCCAAGCGGTGCCCCCACGCTGCCCTCGTTCCCAGGGCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 72 bp | CGATGGAGCCGAGGCAGCCACTGGCAACGGGGTAACTaGCACGGTAGAGGGCGCCTGCAGCCCTGGGAACGA | + |
|
Preference number: 6 (lower is better) Translates to: RWSRGSHWQRGN*HGRGRLQPWER Trigger: TCGTTCCCAGGGCTGCAGGCGCCCTCTACCGTGGCAGTTACCCCGTTGCCAGTGGCTGCCTCGGCTCCATCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | GAGGACAGGTGCAGGCGATGGAGCCGAGGCAGCCACTaGCAACGGGGTAACTGCCACGGTAGAGGGCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EDRCRRWSRGSH*QRGNCHGRGRL Trigger: CAGGCGCCCTCTACCGTGGCAGTTACCCCGTTGCCAGTGGCTGCCTCGGCTCCATCGCCTGCACCTGTCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | GCCCAAGGTACCACGAACAGGAGTCCCGGGGTGAGCTaGGCCTTTGAAGGCCGAGGGTGGGGGACTTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AQGTTNRSPGVS*AFEGRGWGTCG Trigger: CCCACAAGTCCCCCACCCTCGGCCTTCAAAGGCCCAGCTCACCCCGGGACTCCTGTTCGTGGTACCTTGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS TCA 72 bp | GACAGGCCCAAGGTACCACGAACAGGAGTCCCGGGGTaGGCTGGGCCTTTGAAGGCCGAGGGTGGGGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: DRPKVPRTGVPG*AGPLKAEGGGL Trigger: AAGTCCCCCACCCTCGGCCTTCAAAGGCCCAGCTCACCCCGGGACTCCTGTTCGTGGTACCTTGGGCCTGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 90 bp | GGTACAGCGGTGGACAGGTTGAGTGGGAAGGCCGCAGGCGAGGCATaGGAGGTGGGTAGCACTGAGCGCACTGTTGCAGAGCTAGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GTAVDRLSGKAAGEA*EVGSTERTVAELGC Trigger: ACACCCTAGCTCTGCAACAGTGCGCTCAGTGCTACCCACCTCCAATGCCTCGCCTGCGGCCTTCCCACTCAACCTGTCCACCGCTGTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS TCA 72 bp | TACCACGAACAGGAGTCCCGGGGTGAGCTGGGCCTTTaGAGGCCGAGGGTGGGGGACTTGTGGGCTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: YHEQESRGELGL*RPRVGDLWAHF Trigger: AAAGTGAGCCCACAAGTCCCCCACCCTCGGCCTTCAAAGGCCCAGCTCACCCCGGGACTCCTGTTCGTGGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 72 bp | AGTGGGTGTGGTGCTGTGGGTGGAAGTAACAGGCGTTaGGGGCACGGAGGGAGTCCGGATCACAGTCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: SGCGAVGGSNRR*GHGGSPDHSRV Trigger: AACCCGACTGTGATCCGGACTCCCTCCGTGCCCGCAACGCCTGTTACTTCCACCCACAGCACCACACCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 72 bp | GTTGGGGCTACAGACGTGGCACTAGCCACAGGAGACTaGAGGCCTGGAAACATGGCCAGCCCTGGGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VGATDVALATGD*RPGNMASPGVE Trigger: TTCCACCCCAGGGCTGGCCATGTTTCCAGGCCTGCAGTCTCCTGTGGCTAGTGCCACGTCTGTAGCCCCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | GGAGGGAGTCCGGATCACAGTCGGGTTTGGCGTGTTTaGCTGAGGCGTTGGGAACACCGCCAGGGCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: GGSPDHSRVWRV*LRRWEHRQGSV Trigger: AACACTGCCCTGGCGGTGTTCCCAACGCCTCAGCCAAACACGCCAAACCCGACTGTGATCCGGACTCCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 72 bp | GTGACAGCAAAGAGCGAGGGTACAGCGGTGGACAGGTaGAGTGGGAAGGCCGCAGGCGAGGCATTGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VTAKSEGTAVDR*SGKAAGEALEV Trigger: CACCTCCAATGCCTCGCCTGCGGCCTTCCCACTCAACCTGTCCACCGCTGTACCCTCGCTCTTTGCTGTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 90 bp | CCAGCCCCGGTGGCAGCTGCTGACACGGATGGATGGTTTACTGCCTaGGCTGGAGACACAGCAGGTACTGGAGTCGCAGCAGGTGTCGAA | + |
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Preference number: 6 (lower is better) Translates to: PAPVAAADTDGWFTA*AGDTAGTGVAAGVE Trigger: TTCGACACCTGCTGCGACTCCAGTACCTGCTGTGTCTCCAGCCAAGGCAGTAAACCATCCATCCGTGTCAGCAGCTGCCACCGGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS TCA 72 bp | TGCCACCAGGGCGGAGTTGAAGTTGGAACTGAAGGCTaGGGCAAATCCCGGGAGGACAGGTGCAGGCGATGG | + |
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Preference number: 6 (lower is better) Translates to: CHQGGVEVGTEG*GKSREDRCRRW Trigger: CCATCGCCTGCACCTGTCCTCCCGGGATTTGCCTCAGCCTTCAGTTCCAACTTCAACTCCGCCCTGGTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | CCAGGGCAGTGTTGGTCGCACTCATTCCAGCCCCGGTaGCAGCTGCTGACACGGATGGATGGTTTACTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PGQCWSHSFQPR*QLLTRMDGLLP Trigger: AGGCAGTAAACCATCCATCCGTGTCAGCAGCTGCCACCGGGGCTGGAATGAGTGCGACCAACACTGCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | TACAGACGTGGCACTAGCCACAGGAGACTGCAGGCCTaGAAACATGGCCAGCCCTGGGGTGGAAGACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: YRRGTSHRRLQA*KHGQPWGGRPL Trigger: CAGAGGTCTTCCACCCCAGGGCTGGCCATGTTTCCAGGCCTGCAGTCTCCTGTGGCTAGTGCCACGTCTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 72 bp | TGGAAACATGGCCAGCCCTGGGGTGGAAGACCTCTGTaGAGCAGGAACAGCCGCAGGGGGATAGCACTTGTT | + |
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Preference number: 6 (lower is better) Translates to: WKHGQPWGGRPL*SRNSRRGIALV Trigger: AACAAGTGCTATCCCCCTGCGGCTGTTCCTGCTGCACAGAGGTCTTCCACCCCAGGGCTGGCCATGTTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | GATCACAGTCGGGTTTGGCGTGTTTGGCTGAGGCGTTaGGAACACCGCCAGGGCAGTGTTGGTCGCACTCAT | + |
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Preference number: 6 (lower is better) Translates to: DHSRVWRVWLRR*EHRQGSVGRTH Trigger: ATGAGTGCGACCAACACTGCCCTGGCGGTGTTCCCAACGCCTCAGCCAAACACGCCAAACCCGACTGTGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 72 bp | GTGGTGGTCGACGACCCCGCGAGGGATACAGCAGGATaGAGGGAGGGACTGCCCGGTAGAGGGAAACTATTA | + |
|
Preference number: 6 (lower is better) Translates to: VVVDDPARDTAG*REGLPGRGKLL Trigger: TAATAGTTTCCCTCTACCGGGCAGTCCCTCCCTCAATCCTGCTGTATCCCTCGCGGGGTCGTCGACCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 90 bp | AGTCCTGATGACAAACCGGCTTGTGCCACCAGGGCGGAGTTGAAGTaGGAACTGAAGGCTGAGGCAAATCCCGGGAGGACAGGTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPDDKPACATRAELK*ELKAEANPGRTGAG Trigger: GCCTGCACCTGTCCTCCCGGGATTTGCCTCAGCCTTCAGTTCCAACTTCAACTCCGCCCTGGTGGCACAAGCCGGTTTGTCATCAGGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 90 bp | GCTTGGAGTCCTGATGACAAACCGGCTTGTGCCACCAGGGCGGAGTaGAAGTTGGAACTGAAGGCTGAGGCAAATCCCGGGAGGACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AWSPDDKPACATRAE*KLELKAEANPGRTG Trigger: ACCTGTCCTCCCGGGATTTGCCTCAGCCTTCAGTTCCAACTTCAACTCCGCCCTGGTGGCACAAGCCGGTTTGTCATCAGGACTCCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 72 bp | CAGCACTGGCAATTACAGAAGGAGTCGGGGTGGCTATaGTGTGGGATGCTGGTGGGAAGGGCAAAGGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: QHWQLQKESGWL*CGMLVGRAKAD Trigger: GTCTGCCTTTGCCCTTCCCACCAGCATCCCACAGCATAGCCACCCCGACTCCTTCTGTAATTGCCAGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | GGTGGACGGCCACCATTTTATGCTGGAGTGCTTTCATaGCCTTCAGCTGTGGCTCGGCCCAGGAGAAGTACC | + |
|
Preference number: 6 (lower is better) Translates to: GGRPPFYAGVLS*PSAVARPRRST Trigger: GGTACTTCTCCTGGGCCGAGCCACAGCTGAAGGCCATGAAAGCACTCCAGCATAAAATGGTGGCCGTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | ACCACTTCTGCTGGGTGGACGGCCACCATTTTATGCTaGAGTGCTTTCATGGCCTTCAGCTGTGGCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TTSAGWTATILC*SAFMAFSCGSA Trigger: GGCCGAGCCACAGCTGAAGGCCATGAAAGCACTCCAGCATAAAATGGTGGCCGTCCACCCAGCAGAAGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 72 bp | GTGGCAGCTGCTGACACGGATGGATGGTTTACTGCCTaGGCTGGAGACACAGCAGGTACTGGAGTCGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VAAADTDGWFTA*AGDTAGTGVAA Trigger: TGCTGCGACTCCAGTACCTGCTGTGTCTCCAGCCAAGGCAGTAAACCATCCATCCGTGTCAGCAGCTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 72 bp | GACAAACCGGCTTGTGCCACCAGGGCGGAGTTGAAGTaGGAACTGAAGGCTGAGGCAAATCCCGGGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: DKPACATRAELK*ELKAEANPGRT Trigger: TGTCCTCCCGGGATTTGCCTCAGCCTTCAGTTCCAACTTCAACTCCGCCCTGGTGGCACAAGCCGGTTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 72 bp | CCTGATGACAAACCGGCTTGTGCCACCAGGGCGGAGTaGAAGTTGGAACTGAAGGCTGAGGCAAATCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PDDKPACATRAE*KLELKAEANPG Trigger: CCCGGGATTTGCCTCAGCCTTCAGTTCCAACTTCAACTCCGCCCTGGTGGCACAAGCCGGTTTGTCATCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 90 bp | GCAGATGTGGTGGTGGTCGACGACCCCGCGAGGGATACAGCAGGATaGAGGGAGGGACTGCCCGGTAGAGGGAAACTATTAGTCAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: ADVVVVDDPARDTAG*REGLPGRGKLLVNE Trigger: TTCATTGACTAATAGTTTCCCTCTACCGGGCAGTCCCTCCCTCAATCCTGCTGTATCCCTCGCGGGGTCGTCGACCACCACCACATCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 72 bp | CTCACCACTTCTGCTGGGTGGACGGCCACCATTTTATaGTGGAGTGCTTTCATGGCCTTCAGCTGTGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LTTSAGWTATIL*WSAFMAFSCGS Trigger: CGAGCCACAGCTGAAGGCCATGAAAGCACTCCAGCATAAAATGGTGGCCGTCCACCCAGCAGAAGTGGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 72 bp | AGGTTCCACACGAAGAAATCATGGCATGAGGGGCTTTaGAGCCCGCCTTGGAAGCCTGCTCCAGGACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RFHTKKSWHEGL*SPPWKPAPGLS Trigger: AGAGAGTCCTGGAGCAGGCTTCCAAGGCGGGCTGCAAAGCCCCTCATGCCATGATTTCTTCGTGTGGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 72 bp | CAGACCCGCATTGTTGTAAGCACTTGGTGCGATAGTTaGATGCGGCCGGCATGGAGGAATTGGGTAGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QTRIVVSTWCDS*MRPAWRNWVGD Trigger: GTCCCCTACCCAATTCCTCCATGCCGGCCGCATGCAACTATCGCACCAAGTGCTTACAACAATGCGGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | AGGGGTTTCCTGGGAAGGTTCCACACGAAGAAATCATaGCATGAGGGGCTTTGCAGCCCGCCTTGGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RGFLGRFHTKKS*HEGLCSPPWKP Trigger: AGGCTTCCAAGGCGGGCTGCAAAGCCCCTCATGCCATGATTTCTTCGTGTGGAACCTTCCCAGGAAACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | ACGGAGGTGGAGGAGGGACGCCTGGAGCGATCACATTaGCTAATGGTACCAGACCCGCATTGTTGTAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TEVEEGRLERSH*LMVPDPHCCKH Trigger: GTGCTTACAACAATGCGGGTCTGGTACCATTAGCCAATGTGATCGCTCCAGGCGTCCCTCCTCCACCTCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | GACAGAAGGCCTGGAAAAACAGAGCTACCCGCAGCTTaGAGTCCTGATGACAAACCGGCTTGTGCCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: DRRPGKTELPAA*SPDDKPACATR Trigger: CCTGGTGGCACAAGCCGGTTTGTCATCAGGACTCCAAGCTGCGGGTAGCTCTGTTTTTCCAGGCCTTCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS TCA 72 bp | CACACGTGGAAGCAAATGTCTCACTGGAAGCCAGAGTaGCCCTTGATATCGAGCTGGCCTGAGTGGGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: HTWKQMSHWKPE*PLISSWPEWVG Trigger: CCCTACCCACTCAGGCCAGCTCGATATCAAGGGTCACTCTGGCTTCCAGTGAGACATTTGCTTCCACGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 72 bp | CTTCAATGGGACGAGAGTTCTGTGCGTCCACAATGTTaGAGGCCAAGAGCTCCAGAGCGGCCAGCTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LQWDESSVRPQC*RPRAPERPACP Trigger: AGGACAAGCTGGCCGCTCTGGAGCTCTTGGCCTCAAACATTGTGGACGCACAGAACTCTCGTCCCATTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS TCA 72 bp | TTCAATGGGACGAGAGTTCTGTGCGTCCACAATGTTTaGGGCCAAGAGCTCCAGAGCGGCCAGCTTGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FNGTRVLCVHNV*GQELQSGQLVL Trigger: AAGGACAAGCTGGCCGCTCTGGAGCTCTTGGCCTCAAACATTGTGGACGCACAGAACTCTCGTCCCATTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | GTAAGCACTTGGTGCGATAGTTGCATGCGGCCGGCATaGAGGAATTGGGTAGGGGACAGGTTTGTGTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: VSTWCDSCMRPA*RNWVGDRFVWI Trigger: AATCCACACAAACCTGTCCCCTACCCAATTCCTCCATGCCGGCCGCATGCAACTATCGCACCAAGTGCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | GATGCGACTGGGTTTGCCTTTGGGATAGGGGTTTCCTaGGAAGGTTCCACACGAAGAAATCATGGCATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: DATGFAFGIGVS*EGSTRRNHGMR Trigger: CCTCATGCCATGATTTCTTCGTGTGGAACCTTCCCAGGAAACCCCTATCCCAAAGGCAAACCCAGTCGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 90 bp | GGCATGGAGGAATTGGGTAGGGGACAGGTTTGTGTGGATTGTATGTaGAAGGAGGTGGTTTGGATGGCCCGAGAATCCGAGCTGCTATTC | + |
|
Preference number: 6 (lower is better) Translates to: GMEELGRGQVCVDCM*KEVVWMARESELLF Trigger: GAATAGCAGCTCGGATTCTCGGGCCATCCAAACCACCTCCTTCAACATACAATCCACACAAACCTGTCCCCTACCCAATTCCTCCATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS GCA 72 bp | ACTAAAGGTGAAACAGCTCAAGATGCTCACCACTTCTaGTGGGTGGACGGCCACCATTTTATGCTGGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TKGETAQDAHHF*WVDGHHFMLEC Trigger: GCACTCCAGCATAAAATGGTGGCCGTCCACCCAGCAGAAGTGGTGAGCATCTTGAGCTGTTTCACCTTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | GTGAAACAGCTCAAGATGCTCACCACTTCTGCTGGGTaGACGGCCACCATTTTATGCTGGAGTGCTTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: VKQLKMLTTSAG*TATILCWSAFM Trigger: CATGAAAGCACTCCAGCATAAAATGGTGGCCGTCCACCCAGCAGAAGTGGTGAGCATCTTGAGCTGTTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CCA 72 bp | AAAGGTGAAACAGCTCAAGATGCTCACCACTTCTGCTaGGTGGACGGCCACCATTTTATGCTGGAGTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: KGETAQDAHHFC*VDGHHFMLECF Trigger: AAAGCACTCCAGCATAAAATGGTGGCCGTCCACCCAGCAGAAGTGGTGAGCATCTTGAGCTGTTTCACCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 72 bp | ACAATGTTTGAGGCCAAGAGCTCCAGAGCGGCCAGCTaGTCCTTACTAAAGGTGAAACAGCTCAAGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TMFEAKSSRAAS*SLLKVKQLKML Trigger: GAGCATCTTGAGCTGTTTCACCTTTAGTAAGGACAAGCTGGCCGCTCTGGAGCTCTTGGCCTCAAACATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 72 bp | TTGTTAGTGGCCGAGGCAGGAGAATCTGAGTTTCGATaGGGAAGAGAGGATAGTGAAGCCAGTCCACTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLVAEAGESEFR*GREDSEASPLV Trigger: CACAAGTGGACTGGCTTCACTATCCTCTCTTCCCAATCGAAACTCAGATTCTCCTGCCTCGGCCACTAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 90 bp | GAAGGAGGTGGTTTGGATGGCCCGAGAATCCGAGCTGCTATTCCTTaGCCTTCATTGGTAATTTCTTCACCATCCTTCTTCAGAGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: EGGGLDGPRIRAAIP*PSLVISSPSFFRGV Trigger: AACTCCTCTGAAGAAGGATGGTGAAGAAATTACCAATGAAGGCAAAGGAATAGCAGCTCGGATTCTCGGGCCATCCAAACCACCTCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 90 bp | AGTGAAGCCAGTCCACTTGTGACTGCAGATGGCAAGGCGGAGGAATaGATTAAGTGTGTGTCATTTGATGTAAGAAAGCCTTTTAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SEASPLVTADGKAEE*IKCVSFDVRKPFKA Trigger: TGCCTTAAAAGGCTTTCTTACATCAAATGACACACACTTAATCAATTCCTCCGCCTTGCCATCTGCAGTCACAAGTGGACTGGCTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 72 bp | AGTCCACTTGTGACTGCAGATGGCAAGGCGGAGGAATaGATTAAGTGTGTGTCATTTGATGTAAGAAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPLVTADGKAEE*IKCVSFDVRKP Trigger: AGGCTTTCTTACATCAAATGACACACACTTAATCAATTCCTCCGCCTTGCCATCTGCAGTCACAAGTGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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| CDS CAA 90 bp | GATCAACCACCTGTTCGCTGGAGAAGTACCCATGAACATACTCAATaGCTTTTAATTTATATTCCGTTAAAACAGCCTTTCGAATTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: DQPPVRWRSTHEHTQ*LLIYIPLKQPFEFH Trigger: ATGAAATTCGAAAGGCTGTTTTAACGGAATATAAATTAAAAGCAATTGAGTATGTTCATGGGTACTTCTCCAGCGAACAGGTGGTTGATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058577.5 |
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