Pregenerated sensors for PROS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022912Ensembl transcript IDs: ENSMUST00000023629.9
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCGCCATTCTGACTCTGACCTTGTGTGCTCTCAGCAGCTTAGGTTaGGTGATCTGTCCACCCAATGTTCACACCTCTTACAGCATAACC | + |
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Preference number: 1 (lower is better) Translates to: AAILTLTLCALSSLG*VICPPNVHTSYSIT Trigger: GGTTATGCTGTAAGAGGTGTGAACATTGGGTGGACAGATCACTCAACCTAAGCTGCTGAGAGCACACAAGGTCAGAGTCAGAATGGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR TCA 90 bp | TGTTCACACCTCTTACAGCATAACCTGATGTCTCTGATAGAAACCTaGTTGAGACAACATTCATGTGCTGCTCCCGTGGAAAATCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: CSHLLQHNLMSLIET*LRQHSCAAPVENLP Trigger: GGGCAGATTTTCCACGGGAGCAGCACATGAATGTTGTCTCAATCAGGTTTCTATCAGAGACATCAGGTTATGCTGTAAGAGGTGTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR GCA 90 bp | CCTGAAACGATCAATCCAGGAAGAACAGCAAAGCGGCCAGCCACTTaGAATGCACTATCATCAAATATTGGACAATCTTACCTCTGTAAC | + |
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Preference number: 1 (lower is better) Translates to: PETINPGRTAKRPAT*NALSSNIGQSYLCN Trigger: GTTACAGAGGTAAGATTGTCCAATATTTGATGATAGTGCATTGCAAGTGGCTGGCCGCTTTGCTGTTCTTCCTGGATTGATCGTTTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR GCA 90 bp | CCTGATGTCTCTGATAGAAACCTGATTGAGACAACATTCATGTGCTaGTCCCGTGGAAAATCTGCCCTTGTTCTATATTTCAGTGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: PDVSDRNLIETTFMC*SRGKSALVLYFSEG Trigger: ACCTTCACTGAAATATAGAACAAGGGCAGATTTTCCACGGGAGCAGCACATGAATGTTGTCTCAATCAGGTTTCTATCAGAGACATCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR-3UTR TCA 90 bp | CCCACCATTAAGGATGGCCGCCATTCTGACTCTGACCTTGTGTGCTCTCAGCAGCAGGTAAAAGAAAAATaGAGCCTAAAGGAGCTACGC | + |
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Preference number: 2 (lower is better) Translates to: PTIKDGRHSDSDLVCSQQQVKEK*SLKELR Trigger: GCGTAGCTCCTTTAGGCTTCATTTTTCTTTTACCTG...CTGCTGAGAGCACACAAGGTCAGAGTCAGAATGGCGGCCATCCTTAATGGTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR-3UTR GCA 90 bp | GACCTTGTGTGCTCTCAGCAGCTTAGGTTGAGTGATCTGTCCACCCAATGTTCAGAGACAACATTCATGTaGTGCTCCCGTGGAAAATCT | + |
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Preference number: 2 (lower is better) Translates to: DLVCSQQLRLSDLSTQCSETTFM*CSRGKS Trigger: AGATTTTCCACGGGAGCAGCACATGAATGTTGTCTC...TGAACATTGGGTGGACAGATCACTCAACCTAAGCTGCTGAGAGCACACAAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR-3UTR GCA 90 bp | CCCACCATTAAGGATGGCCGCCATTCTGACTCTGACCTTGTGTGCTCTCAGCAGCTAGACAGCAATGAGTaGAAGACTTTTCAAAAATGT | + |
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Preference number: 2 (lower is better) Translates to: PTIKDGRHSDSDLVCSQQLDSNE*KTFQKC Trigger: ACATTTTTGAAAAGTCTTGCACTCATTGCTGTCTAG...CTGCTGAGAGCACACAAGGTCAGAGTCAGAATGGCGGCCATCCTTAATGGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR-3UTR GCA 90 bp | GACCTTGTGTGCTCTCAGCAGCTTAGGTTGAGTGATCTGTCCACCCAATGTTCAATATGCTATCAGCTCTaGCACTTTCACAGACAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: DLVCSQQLRLSDLSTQCSICYQL*HFHRQK Trigger: TTTTTGTCTGTGAAAGTGGCAGAGCTGATAGCATAT...TGAACATTGGGTGGACAGATCACTCAACCTAAGCTGCTGAGAGCACACAAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR-3UTR TCA 90 bp | CGTGGAAAATCTGCCCTTGTTCTATATTTCAGTGAAGGTGTTGGCTCAAGTGGATCAAAGGAAATACTTTaGAATAGAGCTTCGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: RGKSALVLYFSEGVGSSGSKEIL*NRASRP Trigger: AGGTCTCGAAGCTCTATTTCAAAGTATTTCCTTTGA...TCCACTTGAGCCAACACCTTCACTGAAATATAGAACAAGGGCAGATTTTCCACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGCCTAAAGGAGCTACGCGCCTCAGTCAAAGGAAATACTTTGAAATAGAGAATTCACCTGTGATATaGTATCAGCTCTGCCACTTT | + |
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Preference number: 2 (lower is better) Translates to: MKPKGATRLSQRKYFEIENSPVI*YQLCHF Trigger: AAAGTGGCAGAGCTGATAGCATATCACAGGTGAATT...CTCTATTTCAAAGTATTTCCTTTGACTGAGGCGCGTAGCTCCTTTAGGCTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR GCA 72 bp | ATTAAGGATGGCCGCCATTCTGACTCTGACCTTGTGTaGTCTCAGCAGCTTAGGTTGAGTGATCTGTCCACC | + |
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Preference number: 3 (lower is better) Translates to: IKDGRHSDSDLV*SQQLRLSDLST Trigger: GGTGGACAGATCACTCAACCTAAGCTGCTGAGAGCACACAAGGTCAGAGTCAGAATGGCGGCCATCCTTAAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR TCA 72 bp | CTGACTCTGACCTTGTGTGCTCTCAGCAGCTTAGGTTaGGTGATCTGTCCACCCAATGTTCACACCTCTTAC | + |
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Preference number: 3 (lower is better) Translates to: LTLTLCALSSLG*VICPPNVHTSY Trigger: GTAAGAGGTGTGAACATTGGGTGGACAGATCACTCAACCTAAGCTGCTGAGAGCACACAAGGTCAGAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR-3UTR CAA 90 bp | AATGGCAACGAAGCGTCTGATGCACCCCTGAAACGATCAATCCAGGAAGAACAGATTTCAGTGAAGGTGTaGGCTCAAGTGGAAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: NGNEASDAPLKRSIQEEQISVKV*AQVESQ Trigger: CTGGCTTTCCACTTGAGCCAACACCTTCACTGAAAT...CTGTTCTTCCTGGATTGATCGTTTCAGGGGTGCATCAGACGCTTCGTTGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR TCA 72 bp | GTGTTGGCTCAAGTGGAAAGCCAGGTAAAAGAAAAATaGAGCCTAAAGGAGCTACGCGCCTCAGTCAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: VLAQVESQVKEK*SLKELRASVKG Trigger: TCCTTTGACTGAGGCGCGTAGCTCCTTTAGGCTTCATTTTTCTTTTACCTGGCTTTCCACTTGAGCCAACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR GCA 72 bp | TCCAGGAAGAACAGCAAAGCGGCCAGCCACTTGCAATaGACTATCATCAAATATTGGACAATCTTACCTCTG | + |
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Preference number: 3 (lower is better) Translates to: SRKNSKAASHLQ*TIIKYWTILPL Trigger: CAGAGGTAAGATTGTCCAATATTTGATGATAGTGCATTGCAAGTGGCTGGCCGCTTTGCTGTTCTTCCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR GCA 72 bp | TCTGATAGAAACCTGATTGAGACAACATTCATGTGCTaGTCCCGTGGAAAATCTGCCCTTGTTCTATATTTC | + |
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Preference number: 3 (lower is better) Translates to: SDRNLIETTFMC*SRGKSALVLYF Trigger: GAAATATAGAACAAGGGCAGATTTTCCACGGGAGCAGCACATGAATGTTGTCTCAATCAGGTTTCTATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR GCA 90 bp | CCCACCATTAAGGATGGCCGCCATTCTGACTCTGACCTTGTGTGCTCTCAGCAGGTGGTCGAGAGATTCTaGATACAGTATGATGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PTIKDGRHSDSDLVCSQQVVERF*IQYDAL Trigger: GAGGGCATCATACTGTATGCAGAATCTCTCGACCAC...CTGCTGAGAGCACACAAGGTCAGAGTCAGAATGGCGGCCATCCTTAATGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR GCA 90 bp | AAGCCAGGTAAAAGAAAAATGAAGCCTAAAGGAGCTACGCGCCTCAGTCAAAGGAGGCAAAGGGCACTGTaGCCCCAGAAACCAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: KPGKRKMKPKGATRLSQRRQRAL*PQKPKP Trigger: TGGCTTTGGTTTCTGGGGGCACAGTGCCCTTTGCCT...CCTTTGACTGAGGCGCGTAGCTCCTTTAGGCTTCATTTTTCTTTTACCTGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR GCA 90 bp | CCTGAAACGATCAATCCAGGAAGAACAGCAAAGCGGCCAGCCACTTGCAATGCACACGGTTCTTTTCATTaGTTTGTCCAAGACGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: PETINPGRTAKRPATCNAHGSFH*FVQDGE Trigger: CTCGCCGTCTTGGACAAAGCAATGAAAAGAACCGTG...TGCATTGCAAGTGGCTGGCCGCTTTGCTGTTCTTCCTGGATTGATCGTTTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CCA 90 bp | AATGGCAACGAAGCGTCTGATGCACCCCTGAAACGATCAATCCAGGAAGAACAGCAAGTAAAAGCAGCTTaGCCATCTTGGCAGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: NGNEASDAPLKRSIQEEQQVKAA*PSWQAR Trigger: TCTGGCCTGCCAAGATGGCCAAGCTGCTTTTACTTG...CTGTTCTTCCTGGATTGATCGTTTCAGGGGTGCATCAGACGCTTCGTTGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR GCA 90 bp | CCTGAAACGATCAATCCAGGAAGAACAGCAAAGCGGCCAGCCACTTGCAATGCATGCAGAGTTCTTCAATaGACTCTCGTTCAAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PETINPGRTAKRPATCNACRVLQ*TLVQGC Trigger: GCAACCTTGAACGAGAGTGCATTGAAGAACTCTGCA...TGCATTGCAAGTGGCTGGCCGCTTTGCTGTTCTTCCTGGATTGATCGTTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR GCA 90 bp | CCCACCATTAAGGATGGCCGCCATTCTGACTCTGACCTTGTGTGCTCTCAGCAGAAGGTCACATTCATTTaGCAACCCTCTGCATTAGTT | + |
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Preference number: 4 (lower is better) Translates to: PTIKDGRHSDSDLVCSQQKVTFI*QPSALV Trigger: AACTAATGCAGAGGGTTGGCAAATGAATGTGACCTT...CTGCTGAGAGCACACAAGGTCAGAGTCAGAATGGCGGCCATCCTTAATGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CCA 90 bp | CCTGAAACGATCAATCCAGGAAGAACAGCAAAGCGGCCAGCCACTTGCAATGCACCCATCTTCATTGCATaGTATAGGGTCACATTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PETINPGRTAKRPATCNAPIFIA*YRVTLV Trigger: GACCAATGTGACCCTATACCATGCAATGAAGATGGG...TGCATTGCAAGTGGCTGGCCGCTTTGCTGTTCTTCCTGGATTGATCGTTTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CCA 90 bp | AATGGCAACGAAGCGTCTGATGCACCCCTGAAACGATCAATCCAGGAAGAACAGGTGTTGTCACAAATCTaGCTGCAGCCTCCATTGACA | + |
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Preference number: 4 (lower is better) Translates to: NGNEASDAPLKRSIQEEQVLSQI*LQPPLT Trigger: TGTCAATGGAGGCTGCAGCCAGATTTGTGACAACAC...CTGTTCTTCCTGGATTGATCGTTTCAGGGGTGCATCAGACGCTTCGTTGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CCA 90 bp | AATGGCAACGAAGCGTCTGATGCACCCCTGAAACGATCAATCCAGGAAGAACAGCAATCAGGAGCCAATTaGAGTGGTCGAGAGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: NGNEASDAPLKRSIQEEQQSGAN*SGREIL Trigger: CAGAATCTCTCGACCACTCCAATTGGCTCCTGATTG...CTGTTCTTCCTGGATTGATCGTTTCAGGGGTGCATCAGACGCTTCGTTGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR TCA 90 bp | AATGGCAACGAAGCGTCTGATGCACCCCTGAAACGATCAATCCAGGAAGAACAGCAGTATGATGCCCTCTaGATCATATGTGCGAAAATC | + |
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Preference number: 4 (lower is better) Translates to: NGNEASDAPLKRSIQEEQQYDAL*IICAKI Trigger: GATTTTCGCACATATGATTCAGAGGGCATCATACTG...CTGTTCTTCCTGGATTGATCGTTTCAGGGGTGCATCAGACGCTTCGTTGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR TCA 90 bp | GACCTTGTGTGCTCTCAGCAGCTTAGGTTGAGTGATCTGTCCACCCAATGTTCATATTGTAGTCTATGCTaGACTGAGCAATTCCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: DLVCSQQLRLSDLSTQCSYCSLC*TEQFRN Trigger: GTTCCGGAATTGCTCAGTTCAGCATAGACTACAATA...TGAACATTGGGTGGACAGATCACTCAACCTAAGCTGCTGAGAGCACACAAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CCA 90 bp | AATGGCAACGAAGCGTCTGATGCACCCCTGAAACGATCAATCCAGGAAGAACAGCTGCGAAGTATATTTTaGTGTCCAGAAATCCATCGG | + |
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Preference number: 4 (lower is better) Translates to: NGNEASDAPLKRSIQEEQLRSIF*CPEIHR Trigger: CCGATGGATTTCTGGACACCAAAATATACTTCGCAG...CTGTTCTTCCTGGATTGATCGTTTCAGGGGTGCATCAGACGCTTCGTTGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR CAA 72 bp | CAACATTCATGTGCTGCTCCCGTGGAAAATCTGCCCTaGTTCTATATTTCAGTGAAGGTGTTGGCTCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: QHSCAAPVENLP*FYISVKVLAQV Trigger: CACTTGAGCCAACACCTTCACTGAAATATAGAACAAGGGCAGATTTTCCACGGGAGCAGCACATGAATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CCA 90 bp | AATGGCAACGAAGCGTCTGATGCACCCCTGAAACGATCAATCCAGGAAGAACAGCTTCAATTATTTCCTTaGCACCTAAAGCTCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: NGNEASDAPLKRSIQEEQLQLFP*HLKLLV Trigger: AACAAGGAGCTTTAGGTGCCAAGGAAATAATTGAAG...CTGTTCTTCCTGGATTGATCGTTTCAGGGGTGCATCAGACGCTTCGTTGCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CCA 90 bp | CGTGGAAAATCTGCCCTTGTTCTATATTTCAGTGAAGGTGTTGGCTCAAGTGGAACTGAAGGAAATATCTaGGATGCCACCCAGGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: RGKSALVLYFSEGVGSSGTEGNI*DATQVS Trigger: ACTTACCTGGGTGGCATCCCAGATATTTCCTTCAGT...TCCACTTGAGCCAACACCTTCACTGAAATATAGAACAAGGGCAGATTTTCCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR GCA 90 bp | CGTGGAAAATCTGCCCTTGTTCTATATTTCAGTGAAGGTGTTGGCTCAAGTGGATGGCTTCCTCCTTATTaGAGAGTTCTTCAATGCACT | + |
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Preference number: 4 (lower is better) Translates to: RGKSALVLYFSEGVGSSGWLPPY*RVLQCT Trigger: AGTGCATTGAAGAACTCTGCAATAAGGAGGAAGCCA...TCCACTTGAGCCAACACCTTCACTGAAATATAGAACAAGGGCAGATTTTCCACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR GCA 90 bp | AGAAACCTGATTGAGACAACATTCATGTGCTGCTCCCGTGGAAAATCTGCCCTTACAACTCCTGCAAACTaGTCGGCCAAGTATAATAAT | + |
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Preference number: 4 (lower is better) Translates to: RNLIETTFMCCSRGKSALTTPAN*SAKYNN Trigger: ATTATTATACTTGGCCGAGCAGTTTGCAGGAGTTGT...AAGGGCAGATTTTCCACGGGAGCAGCACATGAATGTTGTCTCAATCAGGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR TCA 90 bp | AGAAACCTGATTGAGACAACATTCATGTGCTGCTCCCGTGGAAAATCTGCCCTTAAAATCAAATTCAGCTaGAAACCTCGTGATATCTGG | + |
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Preference number: 4 (lower is better) Translates to: RNLIETTFMCCSRGKSALKIKFS*KPRDIW Trigger: CCAGATATCACGAGGTTTTCAGCTGAATTTGATTTT...AAGGGCAGATTTTCCACGGGAGCAGCACATGAATGTTGTCTCAATCAGGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR TCA 90 bp | ATGAAGCCTAAAGGAGCTACGCGCCTCAGTCAAAGGAAATACTTTGAAATAGAGCAATCGAGCCACCACTaGATTTTCAACAAATACCAC | + |
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Preference number: 4 (lower is better) Translates to: MKPKGATRLSQRKYFEIEQSSHH*IFNKYH Trigger: GTGGTATTTGTTGAAAATTCAGTGGTGGCTCGATTG...CTCTATTTCAAAGTATTTCCTTTGACTGAGGCGCGTAGCTCCTTTAGGCTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CCA 90 bp | CCACTTGCAATGCACTATCATCAAATATTGGACAATCTTACCTCTGTAACTTCTTGCCACCCAGGTAAGTaGCCACGGTTCTTTTCATTG | + |
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Preference number: 4 (lower is better) Translates to: PLAMHYHQILDNLTSVTSCHPGK*PRFFSL Trigger: CAATGAAAAGAACCGTGGCCACTTACCTGGGTGGCA...AGAAGTTACAGAGGTAAGATTGTCCAATATTTGATGATAGTGCATTGCAAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CCA 90 bp | CCACTTGCAATGCACTATCATCAAATATTGGACAATCTTACCTCTGTAACTTCTGACATCTTTTCTAAGTaGGGTCCACAGTTCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: PLAMHYHQILDNLTSVTSDIFSK*GPQFQS Trigger: GGACTGGAACTGTGGACCCCACTTAGAAAAGATGTC...AGAAGTTACAGAGGTAAGATTGTCCAATATTTGATGATAGTGCATTGCAAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| 3UTR CAA 72 bp | AGCGGCCAGCCACTTGCAATGCACTATCATCAAATATaGGACAATCTTACCTCTGTAACTTCTTTCATTACA | + |
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Preference number: 4 (lower is better) Translates to: SGQPLAMHYHQI*DNLTSVTSFIT Trigger: TGTAATGAAAGAAGTTACAGAGGTAAGATTGTCCAATATTTGATGATAGTGCATTGCAAGTGGCTGGCCGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR TCA 90 bp | CCACTTGCAATGCACTATCATCAAATATTGGACAATCTTACCTCTGTAACTTCTGCCTCCATTGACATTTaGGGGATCTTTACATTCATT | + |
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Preference number: 4 (lower is better) Translates to: PLAMHYHQILDNLTSVTSASIDI*GIFTFI Trigger: AATGAATGTAAAGATCCCTCAAATGTCAATGGAGGC...AGAAGTTACAGAGGTAAGATTGTCCAATATTTGATGATAGTGCATTGCAAGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | CCCACCATTAAGGATGGCCGCCATTCTGACTCTGACCTTGTGTGCTCTCAGCAGGCAAGTAAAAGCAGCTaGGCCATCTTGGCAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PTIKDGRHSDSDLVCSQQASKSS*AILAGQ Trigger: CTGGCCTGCCAAGATGGCCAAGCTGCTTTTACTTGC...CTGCTGAGAGCACACAAGGTCAGAGTCAGAATGGCGGCCATCCTTAATGGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | CCTGAAACGATCAATCCAGGAAGAACAGCAAAGCGGCCAGCCACTTGCAATGCACTGACACCTGTCTCCTaGCCAGCCGGGCTTACAGAA | + |
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Preference number: 5 (lower is better) Translates to: PETINPGRTAKRPATCNALTPVS*PAGLTE Trigger: TTCTGTAAGCCCGGCTGGCAAGGAGACAGGTGTCAG...TGCATTGCAAGTGGCTGGCCGCTTTGCTGTTCTTCCTGGATTGATCGTTTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | CCCACCATTAAGGATGGCCGCCATTCTGACTCTGACCTTGTGTGCTCTCAGCAGGTCCAAGACGGCGAGTaGCCTTTGAAGATCTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: PTIKDGRHSDSDLVCSQQVQDGE*PLKIFR Trigger: TCTAAAGATCTTCAAAGGCAACTCGCCGTCTTGGAC...CTGCTGAGAGCACACAAGGTCAGAGTCAGAATGGCGGCCATCCTTAATGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | CCTGAAACGATCAATCCAGGAAGAACAGCAAAGCGGCCAGCCACTTGCAATGCACACTCTCGTTCAAGGTaGCCCTTCATAGTTTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: PETINPGRTAKRPATCNAHSRSR*PFIVSS Trigger: CGAAGAAACTATGAAGGGCAACCTTGAACGAGAGTG...TGCATTGCAAGTGGCTGGCCGCTTTGCTGTTCTTCCTGGATTGATCGTTTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS TCA 90 bp | TTGCTGATCCGAGCACAGAGATACCGCCTCCAATCGAGCCACCACTaGATTTTCAACAAATACCACAATATCCTGAGACGTTCCAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: LLIRAQRYRLQSSHH*IFNKYHNILRRSRA Trigger: CGCTCTGGAACGTCTCAGGATATTGTGGTATTTGTTGAAAATTCAGTGGTGGCTCGATTGGAGGCGGTATCTCTGTGCTCGGATCAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS TCA 90 bp | TCCAATCGAGCCACCACTGAATTTTCAACAAATACCACAATATCCTaGGACGTTCCAGAGCGAGAATCCACCAAGGACAAGGCAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SNRATTEFSTNTTIS*DVPERESTKDKAKG Trigger: GCCCTTTGCCTTGTCCTTGGTGGATTCTCGCTCTGGAACGTCTCAGGATATTGTGGTATTTGTTGAAAATTCAGTGGTGGCTCGATTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | AGAAACCTGATTGAGACAACATTCATGTGCTGCTCCCGTGGAAAATCTGCCCTTCTGTGCCACAGACACTaGGCTTTAGAGCGCATTCAT | + |
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Preference number: 5 (lower is better) Translates to: RNLIETTFMCCSRGKSALLCHRH*ALERIH Trigger: ATGAATGCGCTCTAAAGCCAAGTGTCTGTGGCACAG...AAGGGCAGATTTTCCACGGGAGCAGCACATGAATGTTGTCTCAATCAGGTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | GACCTTGTGTGCTCTCAGCAGCTTAGGTTGAGTGATCTGTCCACCCAATGTTCACCTGCGAAGTATATTTaGGTGTCCAGAAATCCATCG | + |
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Preference number: 5 (lower is better) Translates to: DLVCSQQLRLSDLSTQCSPAKYI*VSRNPS Trigger: CGATGGATTTCTGGACACCAAAATATACTTCGCAGG...TGAACATTGGGTGGACAGATCACTCAACCTAAGCTGCTGAGAGCACACAAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | AATGGCAACGAAGCGTCTGATGCACCCCTGAAACGATCAATCCAGGAAGAACAGAGATACCCATCTTCATaGCATGGTATAGGGTCACAT | + |
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Preference number: 5 (lower is better) Translates to: NGNEASDAPLKRSIQEEQRYPSS*HGIGSH Trigger: ATGTGACCCTATACCATGCAATGAAGATGGGTATCT...CTGTTCTTCCTGGATTGATCGTTTCAGGGGTGCATCAGACGCTTCGTTGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | ATGAAGCCTAAAGGAGCTACGCGCCTCAGTCAAAGGAAATACTTTGAAATAGAGTGGTCTGAGATGGCTTaGACACAGCTTCTGAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: MKPKGATRLSQRKYFEIEWSEMA*TQLLRS Trigger: TGACCTCAGAAGCTGTGTCAAAGCCATCTCAGACCA...CTCTATTTCAAAGTATTTCCTTTGACTGAGGCGCGTAGCTCCTTTAGGCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | ATGAAGCCTAAAGGAGCTACGCGCCTCAGTCAAAGGAAATACTTTGAAATAGAGGCAATCAGGAGCCAATaGGAGTGGTCGAGAGATTCT | + |
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Preference number: 5 (lower is better) Translates to: MKPKGATRLSQRKYFEIEAIRSQ*EWSRDS Trigger: AGAATCTCTCGACCACTCCAATTGGCTCCTGATTGC...CTCTATTTCAAAGTATTTCCTTTGACTGAGGCGCGTAGCTCCTTTAGGCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGTAAAAGAAAAATGAAGCCTAAAGGAGCTACGCGCCTCAGTCAAAGGCAAGGTCACATTCATTaGCCAACCCTCTGCATTAGT | + |
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Preference number: 5 (lower is better) Translates to: KPGKRKMKPKGATRLSQRQGHIH*PTLCIS Trigger: ACTAATGCAGAGGGTTGGCAAATGAATGTGACCTTG...CCTTTGACTGAGGCGCGTAGCTCCTTTAGGCTTCATTTTTCTTTTACCTGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | AGAAACCTGATTGAGACAACATTCATGTGCTGCTCCCGTGGAAAATCTGCCCTTAACATTGCATTTCAGTaGGGATTGCTGATCCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: RNLIETTFMCCSRGKSALNIAFQ*GLLIRA Trigger: TGCTCGGATCAGCAATCCCAACTGAAATGCAATGTT...AAGGGCAGATTTTCCACGGGAGCAGCACATGAATGTTGTCTCAATCAGGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | ATGAAGCCTAAAGGAGCTACGCGCCTCAGTCAAAGGAAATACTTTGAAATAGAGCCACGGTTCTTTTCATaGCTTTGTCCAAGACGGCGA | + |
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Preference number: 5 (lower is better) Translates to: MKPKGATRLSQRKYFEIEPRFFS*LCPRRR Trigger: TCGCCGTCTTGGACAAAGCAATGAAAAGAACCGTGG...CTCTATTTCAAAGTATTTCCTTTGACTGAGGCGCGTAGCTCCTTTAGGCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | GCTGGTGATAGGAATGTGAGCATAATTACAACGAGAAAAGAGATATTAGAAGAAAGCAGCTTGGCCATCTaGGCAGGCCAGATACCCATC | + |
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Preference number: 5 (lower is better) Translates to: AGDRNVSIITTRKEILEESSLAI*AGQIPI Trigger: GATGGGTATCTGGCCTGCCAAGATGGCCAAGCTGCT...TTCTTCTAATATCTCTTTTCTCGTTGTAATTATGCTCACATTCCTATCACCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | ATGAAGCCTAAAGGAGCTACGCGCCTCAGTCAAAGGAAATACTTTGAAATAGAGGAGCCCTTCTCCACATaGAGGAAGCAGTGTTTATTT | + |
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Preference number: 5 (lower is better) Translates to: MKPKGATRLSQRKYFEIEEPFST*RKQCLF Trigger: AAATAAACACTGCTTCCTCAATGTGGAGAAGGGCTC...CTCTATTTCAAAGTATTTCCTTTGACTGAGGCGCGTAGCTCCTTTAGGCTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | AGAAACCTGATTGAGACAACATTCATGTGCTGCTCCCGTGGAAAATCTGCCCTTCATTCATCCAAATCTTaGCAGTCTTTCTTATTTGGG | + |
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Preference number: 5 (lower is better) Translates to: RNLIETTFMCCSRGKSALHSSKS*QSFLFG Trigger: CCCAAATAAGAAAGACTGCAAAGATTTGGATGAATG...AAGGGCAGATTTTCCACGGGAGCAGCACATGAATGTTGTCTCAATCAGGTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS-3UTR CAA 90 bp | GCTGGTGATAGGAATGTGAGCATAATTACAACGAGAAAAGAGATATTAGAAGAACATCTTTACAAGATTTaGATGAGGGATCATATCGGT | + |
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Preference number: 5 (lower is better) Translates to: AGDRNVSIITTRKEILEEHLYKI*MRDHIG Trigger: ACCGATATGATCCCTCATCAAAATCTTGTAAAGATG...TTCTTCTAATATCTCTTTTCTCGTTGTAATTATGCTCACATTCCTATCACCAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS CAA 90 bp | GCTTCCTCACCAGGACTTGTGAAGCACGCTCTTTGGACAAGAAGTTaGTCTCTGAGACAGGGATCACCAGGGCGAGGCAGGCCAGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: ASSPGLVKHALWTRS*SLRQGSPGRGRPVA Trigger: TGCTACTGGCCTGCCTCGCCCTGGTGATCCCTGTCTCAGAGACAAACTTCTTGTCCAAAGAGCGTGCTTCACAAGTCCTGGTGAGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS CAA 72 bp | CGGCGCTTCCTCACCAGGACTTGTGAAGCACGCTCTTaGGACAAGAAGTTTGTCTCTGAGACAGGGATCACC | + |
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Preference number: 6 (lower is better) Translates to: RRFLTRTCEARS*DKKFVSETGIT Trigger: GGTGATCCCTGTCTCAGAGACAAACTTCTTGTCCAAAGAGCGTGCTTCACAAGTCCTGGTGAGGAAGCGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS CAA 72 bp | GCTTGGCCATCTTGGCAGGCCAGATACCCATCTTCATaGCATGGTATAGGGTCACATTGGTCTGAGATGGCT | + |
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Preference number: 6 (lower is better) Translates to: AWPSWQARYPSS*HGIGSHWSEMA Trigger: AGCCATCTCAGACCAATGTGACCCTATACCATGCAATGAAGATGGGTATCTGGCCTGCCAAGATGGCCAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS CAA 90 bp | TGGGGTCCACAGTTCCAGTCCATTTCTGTTAACATTGCATTTCAGTaGGGATTGCTGATCCGAGCACAGAGATACCGCCTCCAATCGAGC | + |
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Preference number: 6 (lower is better) Translates to: WGPQFQSISVNIAFQ*GLLIRAQRYRLQSS Trigger: GCTCGATTGGAGGCGGTATCTCTGTGCTCGGATCAGCAATCCCAACTGAAATGCAATGTTAACAGAAATGGACTGGAACTGTGGACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS CAA 90 bp | GTAAAAGCAGCTTGGCCATCTTGGCAGGCCAGATACCCATCTTCATaGCATGGTATAGGGTCACATTGGTCTGAGATGGCTTTGACACAG | + |
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Preference number: 6 (lower is better) Translates to: VKAAWPSWQARYPSS*HGIGSHWSEMALTQ Trigger: CTGTGTCAAAGCCATCTCAGACCAATGTGACCCTATACCATGCAATGAAGATGGGTATCTGGCCTGCCAAGATGGCCAAGCTGCTTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS TCA 72 bp | CGAGCACAGAGATACCGCCTCCAATCGAGCCACCACTaGATTTTCAACAAATACCACAATATCCTGAGACGT | + |
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Preference number: 6 (lower is better) Translates to: RAQRYRLQSSHH*IFNKYHNILRR Trigger: ACGTCTCAGGATATTGTGGTATTTGTTGAAAATTCAGTGGTGGCTCGATTGGAGGCGGTATCTCTGTGCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS CAA 72 bp | CAGTCCATTTCTGTTAACATTGCATTTCAGTTGGGATaGCTGATCCGAGCACAGAGATACCGCCTCCAATCG | + |
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Preference number: 6 (lower is better) Translates to: QSISVNIAFQLG*LIRAQRYRLQS Trigger: CGATTGGAGGCGGTATCTCTGTGCTCGGATCAGCAATCCCAACTGAAATGCAATGTTAACAGAAATGGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS TCA 72 bp | GCCACCACTGAATTTTCAACAAATACCACAATATCCTaGGACGTTCCAGAGCGAGAATCCACCAAGGACAAG | + |
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Preference number: 6 (lower is better) Translates to: ATTEFSTNTTIS*DVPERESTKDK Trigger: CTTGTCCTTGGTGGATTCTCGCTCTGGAACGTCTCAGGATATTGTGGTATTTGTTGAAAATTCAGTGGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS CAA 72 bp | TGTTCTCAGAGCACTCATCAACATCTTTACAAGATTTaGATGAGGGATCATATCGGTAGCCGTCGGGACATT | + |
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Preference number: 6 (lower is better) Translates to: CSQSTHQHLYKI*MRDHIGSRRDI Trigger: AATGTCCCGACGGCTACCGATATGATCCCTCATCAAAATCTTGTAAAGATGTTGATGAGTGCTCTGAGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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| CDS TCA 72 bp | CATATGTGCGAAAATCAAATTCAGCTGAAAACCTCGTaGTATCTGGCAATCGAAATTTCAGATATAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: HMCENQIQLKTS*YLAIEISDIRQ Trigger: TTGTCTTATATCTGAAATTTCGATTGCCAGATATCACGAGGTTTTCAGCTGAATTTGATTTTCGCACATATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023629.9 |
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