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Pregenerated sensors for PROP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044542

Ensembl transcript IDs: ENSMUST00000051159.3, ENSMUST00000162420.2

Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GAAGGTGGTGCGGTGGCGGCGCCGGGAGTGGGGACGGCCTCTCTGTaGGCAAAGCTTAGGTCTCCCCAGCTCTGTACCAGAGAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: EGGAVAAPGVGTASL*AKLRSPQLCTREPP
Trigger: AGGAGGCTCTCTGGTACAGAGCTGGGGAGACCTAAGCTTTGCCCACAGAGAGGCCGTCCCCACTCCCGGCGCCGCCACCGCACCACCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CCA 90 bp TCCAGCTGTGCTGGGTTGAAGGTGGTGCGGTGGCGGCGCCGGGAGTaGGGACGGCCTCTCTGTGGGCAAAGCTTAGGTCTCCCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SSCAGLKVVRWRRRE*GRPLCGQSLGLPSS
Trigger: AGAGCTGGGGAGACCTAAGCTTTGCCCACAGAGAGGCCGTCCCCACTCCCGGCGCCGCCACCGCACCACCTTCAACCCAGCACAGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CCA 90 bp CCTCAGAGCTCCTGTCGTGGAGATCAGAGTCCCAGAGGCCACTCGTaGCTCAGGCAGGGATCGGCCACAGGCATGACCCTTCGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: PQSSCRGDQSPRGHS*LRQGSATGMTLRLL
Trigger: AAGCAAACGAAGGGTCATGCCTGTGGCCGATCCCTGCCTGAGCCACGAGTGGCCTCTGGGACTCTGATCTCCACGACAGGAGCTCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000162420.2
CDS CCA 90 bp AGAGCTCCTGTCTACCGTGGAGATCAGAGTCCCAGAGGCCACTCGTaGCTCAGGCAGGGATCGGCCACAGGCATGACCCTTCGTTTGCTT +
Preference number: 5 (lower is better)
Translates to: RAPVYRGDQSPRGHS*LRQGSATGMTLRLL
Trigger: AAGCAAACGAAGGGTCATGCCTGTGGCCGATCCCTGCCTGAGCCACGAGTGGCCTCTGGGACTCTGATCTCCACGGTAGACAGGAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CCA 90 bp CTGTACCAGAGAGCCTCCTATAAGCCTCAGAGCTCCTGTCTACCGTaGAGATCAGAGTCCCAGAGGCCACTCGTGGCTCAGGCAGGGATC +
Preference number: 5 (lower is better)
Translates to: LYQRASYKPQSSCLP*RSESQRPLVAQAGI
Trigger: GATCCCTGCCTGAGCCACGAGTGGCCTCTGGGACTCTGATCTCCACGGTAGACAGGAGCTCTGAGGCTTATAGGAGGCTCTCTGGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CCA 90 bp GGCAAGAAGCCAGAGAAGGTGGCCGTAGATAGATGGGCTATCGGCTaGAGAAGTGACCGCTCTTGCTTCCGTTGCTTAGCCCTGCGGTTC +
Preference number: 5 (lower is better)
Translates to: GKKPEKVAVDRWAIG*RSDRSCFRCLALRF
Trigger: GAACCGCAGGGCTAAGCAACGGAAGCAAGAGCGGTCACTTCTCCAGCCGATAGCCCATCTATCTACGGCCACCTTCTCTGGCTTCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CCA 90 bp GAGAGAGTGGCTGTAGGGATGAGGGAAGCAGGGCGCTGGTGGAGGTaGTGTCCCATAGGTGTAGGGATAGGCAGAGGATTCTGGCAAGAA +
Preference number: 5 (lower is better)
Translates to: ERVAVGMREAGRWWR*CPIGVGIGRGFWQE
Trigger: TTCTTGCCAGAATCCTCTGCCTATCCCTACACCTATGGGACACCACCTCCACCAGCGCCCTGCTTCCCTCATCCCTACAGCCACTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CCA 90 bp GCAGAGGATTCTGGCAAGAAGCCAGAGAAGGTGGCCGTAGATAGATaGGCTATCGGCTGGAGAAGTGACCGCTCTTGCTTCCGTTGCTTA +
Preference number: 5 (lower is better)
Translates to: AEDSGKKPEKVAVDR*AIGWRSDRSCFRCL
Trigger: TAAGCAACGGAAGCAAGAGCGGTCACTTCTCCAGCCGATAGCCCATCTATCTACGGCCACCTTCTCTGGCTTCTTGCCAGAATCCTCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CCA 72 bp AGCTGTTCCAGCTGTGCTGGGTTGAAGGTGGTGCGGTaGCGGCGCCGGGAGTGGGGACGGCCTCTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: SCSSCAGLKVVR*RRREWGRPLCG
Trigger: CCCACAGAGAGGCCGTCCCCACTCCCGGCGCCGCCACCGCACCACCTTCAACCCAGCACAGCTGGAACAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CCA 72 bp GCTGGGTTGAAGGTGGTGCGGTGGCGGCGCCGGGAGTaGGGACGGCCTCTCTGTGGGCAAAGCTTAGGTCTC +
Preference number: 6 (lower is better)
Translates to: AGLKVVRWRRRE*GRPLCGQSLGL
Trigger: GAGACCTAAGCTTTGCCCACAGAGAGGCCGTCCCCACTCCCGGCGCCGCCACCGCACCACCTTCAACCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS TCA 72 bp TGCGGTTCTGGAACCAGACCTGGATTCTGGCTTCACTaGGGCCAGTGTCTTGGGCAAGCCCCTCTCGAGCCC +
Preference number: 6 (lower is better)
Translates to: CGSGTRPGFWLH*GQCLGQAPLEP
Trigger: GGGCTCGAGAGGGGCTTGCCCAAGACACTGGCCTCAGTGAAGCCAGAATCCAGGTCTGGTTCCAGAACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CCA 72 bp AGAGTGGCTGTAGGGATGAGGGAAGCAGGGCGCTGGTaGAGGTGGTGTCCCATAGGTGTAGGGATAGGCAGA +
Preference number: 6 (lower is better)
Translates to: RVAVGMREAGRW*RWCPIGVGIGR
Trigger: TCTGCCTATCCCTACACCTATGGGACACCACCTCCACCAGCGCCCTGCTTCCCTCATCCCTACAGCCACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CCA 72 bp CCAGAGAAGGTGGCCGTAGATAGATGGGCTATCGGCTaGAGAAGTGACCGCTCTTGCTTCCGTTGCTTAGCC +
Preference number: 6 (lower is better)
Translates to: PEKVAVDRWAIG*RSDRSCFRCLA
Trigger: GGCTAAGCAACGGAAGCAAGAGCGGTCACTTCTCCAGCCGATAGCCCATCTATCTACGGCCACCTTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000051159.3
CDS CAA 72 bp CTCAGGCAGGGATCGGCCACAGGCATGACCCTTCGTTaGCTTTTCCTGATGGCTCCTTCTTTGAGCTTCCAT +
Preference number: 6 (lower is better)
Translates to: LRQGSATGMTLR*LFLMAPSLSFH
Trigger: ATGGAAGCTCAAAGAAGGAGCCATCAGGAAAAGCAAACGAAGGGTCATGCCTGTGGCCGATCCCTGCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000051159.3
ENSMUST00000162420.2