RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PROM1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029086

Ensembl transcript IDs: ENSMUST00000030973.12, ENSMUST00000074113.13, ENSMUST00000087441.11, ENSMUST00000087442.11, ENSMUST00000165909.8, ENSMUST00000171543.8, ENSMUST00000177946.8, ENSMUST00000179059.8, ENSMUST00000196178.2, ENSMUST00000196378.5, ENSMUST00000197706.5, ENSMUST00000197750.5, ENSMUST00000198347.2

Found 548 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTaGCACACTTTTAGTGAATGCAGACTCCTTTCTACAGCATCACTA +
Preference number: 1 (lower is better)
Translates to: RADRNPQGRALPALG*HTFSECRLLSTASL
Trigger: TAGTGATGCTGTAGAAAGGAGTCTGCATTCACTAAAAGTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR TCA 90 bp ATCCCTTGTTCTGACTTTGGCAGTGGCATCAAGTGGGAAACTCCGTaGTTGTTCTTGAATTCTATTTCTAAACCGCAGGTAGCTCCAAAA +
Preference number: 1 (lower is better)
Translates to: IPCSDFGSGIKWETP*LFLNSISKPQVAPK
Trigger: TTTTGGAGCTACCTGCGGTTTAGAAATAGAATTCAAGAACAATCACGGAGTTTCCCACTTGATGCCACTGCCAAAGTCAGAACAAGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR TCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACATGACTGTTCATTCCTaGCAAAGTGCTACCCTAAGA +
Preference number: 2 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHMTVHS*QSATLR
Trigger: TCTTAGGGTAGCACTTTGTCAGGAATGAACAGTCAT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGGTTTCTTCTGCACTTaGAACGTTCTAGAAGACTCA +
Preference number: 2 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEGFFCT*NVLEDS
Trigger: TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATGACTGTTCATTCCTaGCAAAGTGCTACCCTAAGA +
Preference number: 2 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMMTVHS*QSATLR
Trigger: TCTTAGGGTAGCACTTTGTCAGGAATGAACAGTCAT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGGGTTTCTTCTGCACTTaGAACGTTCTAGAAGACTCA +
Preference number: 2 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMGFFCT*NVLEDS
Trigger: TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACC...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACATCTCTTCTGTAAACTaGTTTGTGTTTAGCACACTT +
Preference number: 2 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHISSVN*FVFSTL
Trigger: AAGTGTGCTAAACACAAACCAGTTTACAGAAGAGAT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACAGTGCCACTAAACTGTaGACCAGGACCTGTGATTGC +
Preference number: 2 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDSATKL*TRTCDC
Trigger: GCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACT...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGATCTCTTCTGTAAACTaGTTTGTGTTTAGCACACTT +
Preference number: 2 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEISSVN*FVFSTL
Trigger: AAGTGTGCTAAACACAAACCAGTTTACAGAAGAGAT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCAGTGCCACTAAACTGTaGACCAGGACCTGTGATTGC +
Preference number: 2 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHISATKL*TRTCDC
Trigger: GCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACATGACTGTTCATTCCTaGCAAAGTGCTACCCTAAGA +
Preference number: 2 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDMTVHS*QSATLR
Trigger: TCTTAGGGTAGCACTTTGTCAGGAATGAACAGTCAT...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGGTTTCTTCTGCACTTaGAACGTTCTAGAAGACTCA +
Preference number: 2 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDGFFCT*NVLEDS
Trigger: TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCATGACTGTTCATTCCTaGCAAAGTGCTACCCTAAGA +
Preference number: 2 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIMTVHS*QSATLR
Trigger: TCTTAGGGTAGCACTTTGTCAGGAATGAACAGTCAT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCGGAGAGAATCATTCATaGGTTGCAATGGATATGTGG +
Preference number: 2 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIGENHS*VAMDMW
Trigger: CCACATATCCATTGCAACTCATGAATGATTCTCTCC...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCGGTTTCTTCTGCACTTaGAACGTTCTAGAAGACTCA +
Preference number: 2 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIGFFCT*NVLEDS
Trigger: TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACC...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACATCTCTTCTGTAAACTaGTTTGTGTTTAGCACACTT +
Preference number: 2 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDISSVN*FVFSTL
Trigger: AAGTGTGCTAAACACAAACCAGTTTACAGAAGAGAT...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGGTTGCAATGGATATGTaGATTATAACCATGATGACT +
Preference number: 2 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKVAMDM*IITMMT
Trigger: AGTCATCATGGTTATAATCCACATATCCATTGCAAC...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR CCA 72 bp AGGAAGCATGCATGTTCACCAGACACAGAACAAAGGTaGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAG +
Preference number: 3 (lower is better)
Translates to: RKHACSPDTEQR*VAELAGRSNDK
Trigger: CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCATGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197750.5
3UTR CCA 72 bp CACCCAGCCACCAGTACGAGTCATATTCTTCCAGCTTaGGCAGCTCCTGGTTTAAGTATCTGTTGCTGTTAT +
Preference number: 3 (lower is better)
Translates to: HPATSTSHILPA*AAPGLSICCCY
Trigger: ATAACAGCAACAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTGGCTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
3UTR-3UTR CAA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAATGTTGACTATCTTGTaGTTCAAGCAGCTTCAACTC +
Preference number: 3 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSMLTIL*FKQLQL
Trigger: GAGTTGAAGCTGCTTGAACAACAAGATAGTCAACAT...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR TCA 72 bp GCCCATTCTTACAAACCAGAGAGTGCCACTAAACTGTaGACCAGGACCTGTGATTGCGATAATGATTCCGCT +
Preference number: 3 (lower is better)
Translates to: AHSYKPESATKL*TRTCDCDNDSA
Trigger: AGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGTAAGAATGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGATGTTGACTATCTTGTaGTTCAAGCAGCTTCAACTC +
Preference number: 3 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEMLTIL*FKQLQL
Trigger: GAGTTGAAGCTGCTTGAACAACAAGATAGTCAACAT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR TCA 72 bp TCAACATCAGGACAGGCTGATGACACACATCACAGATaGCCAGATGACACTGAACGTAATGCCCATTCTTAC +
Preference number: 3 (lower is better)
Translates to: STSGQADDTHHR*PDDTERNAHSY
Trigger: GTAAGAATGGGCATTACGTTCAGTGTCATCTGGTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR TCA 72 bp AGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTaGCACACTTTTAGTGAATGCAGACTCCTTTCTACA +
Preference number: 3 (lower is better)
Translates to: RNPQGRALPALG*HTFSECRLLST
Trigger: TGTAGAAAGGAGTCTGCATTCACTAAAAGTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATGTTGACTATCTTGTaGTTCAAGCAGCTTCAACTC +
Preference number: 3 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMMLTIL*FKQLQL
Trigger: GAGTTGAAGCTGCTTGAACAACAAGATAGTCAACAT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR TCA 72 bp TCTGACTTTGGCAGTGGCATCAAGTGGGAAACTCCGTaGTTGTTCTTGAATTCTATTTCTAAACCGCAGGTA +
Preference number: 3 (lower is better)
Translates to: SDFGSGIKWETP*LFLNSISKPQV
Trigger: TACCTGCGGTTTAGAAATAGAATTCAAGAACAATCACGGAGTTTCCCACTTGATGCCACTGCCAAAGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR GCA 72 bp GATTATAACCATGATGACTGTTCATTCCTGACAAAGTaGTACCCTAAGACCACTGATGCCATGTTCCTAGTG +
Preference number: 3 (lower is better)
Translates to: DYNHDDCSFLTK*YPKTTDAMFLV
Trigger: CACTAGGAACATGGCATCAGTGGTCTTAGGGTAGCACTTTGTCAGGAATGAACAGTCATCATGGTTATAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGATGTTGACTATCTTGTaGTTCAAGCAGCTTCAACTC +
Preference number: 3 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKMLTIL*FKQLQL
Trigger: GAGTTGAAGCTGCTTGAACAACAAGATAGTCAACAT...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
3UTR-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGGTGATGCTTTCCATGTaGACTATCTTGTTGTTCAAG +
Preference number: 3 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKVMLSM*TILLFK
Trigger: CTTGAACAACAAGATAGTCAACATGGAAAGCATCAC...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
CDS-3UTR GCA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGGGCGCATTCTGCTTCTaGCGCTGGTGCATCTCTCCG +
Preference number: 4 (lower is better)
Translates to: VHQTQNKGGWQNWREGATGAFCF*RWCISP
Trigger: CGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCC...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTGGCGCATTCTGCTTCTaGCGCTGGTGCATCTCTCCG +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSGAFCF*RWCISP
Trigger: CGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCC...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGCCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: VHQTQNKGGWQNWREGATPARSR*HPGLRM
Trigger: CATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGG...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCATCCAACCCCAGCCATaGGGAAGATGCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSIQPQP*GRCLQC
Trigger: ACACTGGAGGCATCTTCCTCATGGCTGGGGTTGGAT...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp ACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAACCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: TRHRTKVGGRTGGKEQRQPARSR*HPGLRM
Trigger: CATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGG...TTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRPARSR*HPGLRM
Trigger: CATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGG...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAGCTCAGGTTGGTATTaGGCTGGGTGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSSSGWY*AGWLHL
Trigger: AAGATGCAGCCACCCAGCTCAATACCAACCTGAGCT...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACATCCAACCCCAGCCATaGGGAAGATGCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: CSPDTEQRWVAELAGRSNIQPQP*GRCLQC
Trigger: ACACTGGAGGCATCTTCCTCATGGCTGGGGTTGGAT...GTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTATCCAACCCCAGCCATaGGGAAGATGCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSIQPQP*GRCLQC
Trigger: ACACTGGAGGCATCTTCCTCATGGCTGGGGTTGGAT...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGGCGCATTCTGCTTCTaGCGCTGGTGCATCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSGAFCF*RWCISP
Trigger: CGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTACCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLPARSR*HPGLRM
Trigger: CATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGG...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSVGPLF*LPARSR
Trigger: TCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAAC...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp TGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: CMFTRHRTKVGGRTGGKEVGPLF*LPARSR
Trigger: TCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAAC...CTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCCTGCTGCTCATGTTCTaGAGGGCATCCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSLLLMF*RASLVC
Trigger: ACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAG...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACACTGCTGCTCATGTTCTaGAGGGCATCCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: HQTQNKGGWQNWREGATTLLLMF*RASLVC
Trigger: ACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAG...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGCTGCTGCTCATGTTCTaGAGGGCATCCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKLLLMF*RASLVC
Trigger: ACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAG...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGGGAGACTTTTCAGGCTaGTGCTCATGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VHQTQNKGGWQNWREGATGDFSG*CSCSAG
Trigger: CCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCC...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACGGAGACTTTTCAGGCTaGTGCTCATGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDGDFSG*CSCSAG
Trigger: CCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCC...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp GCCACCCAGCCACCAGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTGGAGACTTTTCAGGCTaGTGCTCATGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ATQPPVRVIFFQLGQLLVGDFSG*CSCSAG
Trigger: CCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCC...AACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTGGCTGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CCA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTGGGTGGCTGCATCTTaGAGACTTTTCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKWVAAS*RLFRLL
Trigger: CAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCA...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGGAAGTAAGAGCACCGTaGCTTTCCCTATGCCGAACC +
Preference number: 4 (lower is better)
Translates to: VHQTQNKGGWQNWREGATEVRAP*LSLCRT
Trigger: GGTTCGGCATAGGGAAAGCCACGGTGCTCTTACTTC...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGGAAGTAAGAGCACCGTaGCTTTCCCTATGCCGAACC +
Preference number: 4 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKEVRAP*LSLCRT
Trigger: GGTTCGGCATAGGGAAAGCCACGGTGCTCTTACTTC...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GCCACCCAGCCACCAGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTGATGCCATCCAGGTCTaGGAATGCCTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ATQPPVRVIFFQLGQLLVDAIQV*ECLVLG
Trigger: ACCAAGAACAAGGCATTCTCAGACCTGGATGGCATC...AACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTGGCTGGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR TCA 90 bp TGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGAGCTCAGGTTGGTATTaGGCTGGGTGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: CMFTRHRTKVGGRTGGKESSGWY*AGWLHL
Trigger: AAGATGCAGCCACCCAGCTCAATACCAACCTGAGCT...CTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCTACAGTCACTGCTGCTaGGCGAATTCTCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSYSHCC*ANSRCC
Trigger: ACAGCATCGAGAATTCGCTCAGCAGCAGTGACTGTA...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAATCCACTGATGGGAGCTaGCTTGAATTGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRHRTKVGGRTGGKEQRQSTDGS*LELRLL
Trigger: GAGCAGCCTCAATTCAAGTCAGCTCCCATCAGTGGA...TTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087442.11
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGGCGCATTCTGCTTCTaGCGCTGGTGCATCTCTCCG +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEGAFCF*RWCISP
Trigger: CGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCACCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSPARSR*HPGLRM
Trigger: CATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGG...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACCCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHPARSR*HPGLRM
Trigger: CATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGG...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp ATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAAGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: MFTRHRTKVGGRTGGKEQVGPLF*LPARSR
Trigger: TCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAAC...TTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp ACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAACTGCTGCTCATGTTCTaGAGGGCATCCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TRHRTKVGGRTGGKEQRQLLLMF*RASLVC
Trigger: ACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAG...TTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACTGCTATCGCAGATCTTaGTGGCTGGATCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDCYRRS*WLDLRY
Trigger: GTACCTCAGATCCAGCCAGCAAGATCTGCGATAGCA...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CAAGCCACCCAGCCACCAGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGTGCTATCGCAGATCTTaGTGGCTGGATCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: QATQPPVRVIFFQLGQLLCYRRS*WLDLRY
Trigger: GTACCTCAGATCCAGCCAGCAAGATCTGCGATAGCA...CAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTGGCTGGGTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR GCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSTGGRR*WWMALI
Trigger: TATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGT...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKTGGRR*WWMALI
Trigger: TATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGT...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTGGGTGGCTGCATCTTaGAGACTTTTCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSWVAAS*RLFRLL
Trigger: CAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCA...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACGGAGGGAGGAGATGCTaGTGGATGGCTCTTATATTC +
Preference number: 4 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDGGRRC*WMALIF
Trigger: GAATATAAGAGCCATCCACCAGCATCTCCTCCCTCC...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCGGAGGGAGGAGATGCTaGTGGATGGCTCTTATATTC +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSGGRRC*WMALIF
Trigger: GAATATAAGAGCCATCCACCAGCATCTCCTCCCTCC...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGAGATGCCATCCAGGTCTaGGAATGCCTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRDAIQV*ECLVLG
Trigger: ACCAAGAACAAGGCATTCTCAGACCTGGATGGCATC...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGATGCCATCCAGGTCTaGGAATGCCTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: CSPDTEQRWVAELAGRSNDAIQV*ECLVLG
Trigger: ACCAAGAACAAGGCATTCTCAGACCTGGATGGCATC...GTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAGATGCCATCCAGGTCTaGGAATGCCTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HVHQTQNKGGWQNWREGADAIQV*ECLVLG
Trigger: ACCAAGAACAAGGCATTCTCAGACCTGGATGGCATC...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAAGCTCAGGTTGGTATTaGGCTGGGTGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGSSGWY*AGWLHL
Trigger: AAGATGCAGCCACCCAGCTCAATACCAACCTGAGCT...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGATACAGTCACTGCTGCTaGGCGAATTCTCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRYSHCC*ANSRCC
Trigger: ACAGCATCGAGAATTCGCTCAGCAGCAGTGACTGTA...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAATCCAACCCCAGCCATaGGGAAGATGCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSIQPQP*GRCLQC
Trigger: ACACTGGAGGCATCTTCCTCATGGCTGGGGTTGGAT...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTGGTGAGGAAATGCTaGACAGAGTCCAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKLVRKC*TESKEA
Trigger: TGCCTCTTTGGACTCTGTTCAGCATTTCCTCACCAA...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGTTGGTGAGGAAATGCTaGACAGAGTCCAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VHQTQNKGGWQNWREGATLVRKC*TESKEA
Trigger: TGCCTCTTTGGACTCTGTTCAGCATTTCCTCACCAA...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGATCCACTGATGGGAGCTaGCTTGAATTGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGSTDGS*LELRLL
Trigger: GAGCAGCCTCAATTCAAGTCAGCTCCCATCAGTGGA...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087442.11
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGCCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEPARSR*HPGLRM
Trigger: CATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGG...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AGCAGAAAGCAGACAATCAAGCCACCCAGCCACCAGTACGAGTCATATTCTTCCCCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: SRKQTIKPPSHQYESYSSPARSR*HPGLRM
Trigger: CATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGG...GGAAGAATATGACTCGTACTGGTGGCTGGGTGGCTTGATTGTCTGCTTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR GCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHVGPLF*LPARSR
Trigger: TCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAAC...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSVGPLF*LPARSR
Trigger: TCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAAC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTAGGAGACTTTTCAGGCTaGTGCTCATGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLGDFSG*CSCSAG
Trigger: CCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCC...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp TGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGTGCTATCGCAGATCTTaGTGGCTGGATCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: CMFTRHRTKVGGRTGGKECYRRS*WLDLRY
Trigger: GTACCTCAGATCCAGCCAGCAAGATCTGCGATAGCA...CTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSTGGRR*WWMALI
Trigger: TATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGT...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAACGTATTCAGTGATTaGTGCACAGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HQTQNKGGWQNWREGATTNVFSD*CTGGRR
Trigger: TCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTT...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGTATTCAGTGATTaGTGCACAGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSNVFSD*CTGGRR
Trigger: TCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTT...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGATGGGTGGCTGCATCTTaGAGACTTTTCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGWVAAS*RLFRLL
Trigger: CAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCA...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCGGGAGGAGATGCTGGTaGATGGCTCTTATATTCTGT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSGRRCW*MALIFC
Trigger: ACAGAATATAAGAGCCATCCACCAGCATCTCCTCCC...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTAGAAGTAAGAGCACCGTaGCTTTCCCTATGCCGAACC +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLEVRAP*LSLCRT
Trigger: GGTTCGGCATAGGGAAAGCCACGGTGCTCTTACTTC...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCCAACAATCCCAGCATTaGAGGTATCTTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSQQSQH*RYLGSH
Trigger: ATGAGACCCAAGATACCTTCAATGCTGGGATTGTTG...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp AGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTGATGCCATCCAGGTCTaGGAATGCCTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RHRTKVGGRTGGKEQRQVDAIQV*ECLVLG
Trigger: ACCAAGAACAAGGCATTCTCAGACCTGGATGGCATC...AACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACAGCTCAGGTTGGTATTaGGCTGGGTGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHSSGWY*AGWLHL
Trigger: AAGATGCAGCCACCCAGCTCAATACCAACCTGAGCT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGATACAGTCACTGCTGCTaGGCGAATTCTCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGYSHCC*ANSRCC
Trigger: ACAGCATCGAGAATTCGCTCAGCAGCAGTGACTGTA...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACTTGGTGAGGAAATGCTaGACAGAGTCCAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: CSPDTEQRWVAELAGRSNLVRKC*TESKEA
Trigger: TGCCTCTTTGGACTCTGTTCAGCATTTCCTCACCAA...GTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACGGGAAACGTTATTGGTaGGGAAATGCTGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDGKRYW*GNAEQS
Trigger: ACTCTGTTCAGCATTTCCTCACCAATAACGTTTCCC...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCGGGAAACGTTATTGGTaGGGAAATGCTGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSGKRYW*GNAEQS
Trigger: ACTCTGTTCAGCATTTCCTCACCAATAACGTTTCCC...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACTCCACTGATGGGAGCTaGCTTGAATTGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHSTDGS*LELRLL
Trigger: GAGCAGCCTCAATTCAAGTCAGCTCCCATCAGTGGA...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCATCCACTGATGGGAGCTaGCTTGAATTGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSSTDGS*LELRLL
Trigger: GAGCAGCCTCAATTCAAGTCAGCTCCCATCAGTGGA...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEVGPLF*LPARSR
Trigger: TCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAAC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AGCAGAAAGCAGACAATCAAGCCACCCAGCCACCAGTACGAGTCATATTCTTCCGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: SRKQTIKPPSHQYESYSSVGPLF*LPARSR
Trigger: TCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAAC...GGAAGAATATGACTCGTACTGGTGGCTGGGTGGCTTGATTGTCTGCTTTCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR GCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCACTGCTGCTCATGTTCTaGAGGGCATCCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSLLLMF*RASLVC
Trigger: ACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAG...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACGGAGACTTTTCAGGCTaGTGCTCATGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHGDFSG*CSCSAG
Trigger: CCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCC...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGGAGACTTTTCAGGCTaGTGCTCATGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSGDFSG*CSCSAG
Trigger: CCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTATGCTATCGCAGATCTTaGTGGCTGGATCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLCYRRS*WLDLRY
Trigger: GTACCTCAGATCCAGCCAGCAAGATCTGCGATAGCA...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGTACCTCGACCTCTTTTaGAATCCCTGTAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: VHQTQNKGGWQNWREGATYLDLF*NPCRLA
Trigger: AGCAAGTCTACAGGGATTGCAAAAGAGGTCGAGGTA...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACATACCTCGACCTCTTTTaGAATCCCTGTAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: HQTQNKGGWQNWREGATTYLDLF*NPCRLA
Trigger: AGCAAGTCTACAGGGATTGCAAAAGAGGTCGAGGTA...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTAACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLTGGRR*WWMALI
Trigger: TATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGT...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGAAACGTATTCAGTGATTaGTGCACAGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRNVFSD*CTGGRR
Trigger: TCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTT...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGCCTTGTTCTTGGTGTTaGTGTACTGCTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKPCSWC*CTAPLH
Trigger: ATGTAGTGGAGCAGTACACCAACACCAAGAACAAGG...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGCCTTGTTCTTGGTGTTaGTGTACTGCTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: VHQTQNKGGWQNWREGATPCSWC*CTAPLH
Trigger: ATGTAGTGGAGCAGTACACCAACACCAAGAACAAGG...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACTGGGTGGCTGCATCTTaGAGACTTTTCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHWVAAS*RLFRLL
Trigger: CAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCA...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGAGGGAGGAGATGCTGGTaGATGGCTCTTATATTCTGT +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRGRRCW*MALIFC
Trigger: ACAGAATATAAGAGCCATCCACCAGCATCTCCTCCC...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTGGGAGGAGATGCTGGTaGATGGCTCTTATATTCTGT +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSGRRCW*MALIFC
Trigger: ACAGAATATAAGAGCCATCCACCAGCATCTCCTCCC...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGTTGTTGCTTGTTTGCTaGAGGGTCCAGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: VHQTQNKGGWQNWREGATLLLVC*RVQTLC
Trigger: ACAAAGTGTCTGGACCCTCCAGCAAACAAGCAACAA...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTGTTGCTTGTTTGCTaGAGGGTCCAGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKLLLVC*RVQTLC
Trigger: ACAAAGTGTCTGGACCCTCCAGCAAACAAGCAACAA...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGAAGTAAGAGCACCGTaGCTTTCCCTATGCCGAACC +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSEVRAP*LSLCRT
Trigger: GGTTCGGCATAGGGAAAGCCACGGTGCTCTTACTTC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
CDS-3UTR TCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTCAACAATCCCAGCATTaGAGGTATCTTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSQQSQH*RYLGSH
Trigger: ATGAGACCCAAGATACCTTCAATGCTGGGATTGTTG...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACTCAGTCAGGAGTGTTTaGAAGTCTCTGAAATTGCTC +
Preference number: 4 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDSVRSV*KSLKLL
Trigger: GAGCAATTTCAGAGACTTTCAAACACTCCTGACTGA...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACGATGCCATCCAGGTCTaGGAATGCCTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHDAIQV*ECLVLG
Trigger: ACCAAGAACAAGGCATTCTCAGACCTGGATGGCATC...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGAGCTCAGGTTGGTATTaGGCTGGGTGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAESSGWY*AGWLHL
Trigger: AAGATGCAGCCACCCAGCTCAATACCAACCTGAGCT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACTACAGTCACTGCTGCTaGGCGAATTCTCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHYSHCC*ANSRCC
Trigger: ACAGCATCGAGAATTCGCTCAGCAGCAGTGACTGTA...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACATGGTCAATGTTGAAATaGTCACTGACGTTGACGACA +
Preference number: 4 (lower is better)
Translates to: HQTQNKGGWQNWREGATTWSMLK*SLTLTT
Trigger: TGTCGTCAACGTCAGTGATCATTTCAACATTGACCA...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGATTGGTGAGGAAATGCTaGACAGAGTCCAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGLVRKC*TESKEA
Trigger: TGCCTCTTTGGACTCTGTTCAGCATTTCCTCACCAA...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGGGAAACGTTATTGGTaGGGAAATGCTGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: CSPDTEQRWVAELAGRSNGKRYW*GNAEQS
Trigger: ACTCTGTTCAGCATTTCCTCACCAATAACGTTTCCC...GTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDMSSSL*WHKRPS
Trigger: ACTGGGTCTTTTATGCCATCACAGAGAAGATGACAT...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKMSSSL*WHKRPS
Trigger: ACTGGGTCTTTTATGCCATCACAGAGAAGATGACAT...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTCCACTGATGGGAGCTaGCTTGAATTGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAESTDGS*LELRLL
Trigger: GAGCAGCCTCAATTCAAGTCAGCTCCCATCAGTGGA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CAGCAGAAAGCAGACAATCAAGCCACCCAGCCACCAGTACGAGTCATATTCTTCTCCACTGATGGGAGCTaGCTTGAATTGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QQKADNQATQPPVRVIFFSTDGS*LELRLL
Trigger: GAGCAGCCTCAATTCAAGTCAGCTCCCATCAGTGGA...GAAGAATATGACTCGTACTGGTGGCTGGGTGGCTTGATTGTCTGCTTTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR GCA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACATCTGAAATTGCTCTTTaGCAGTTTCTGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HQTQNKGGWQNWREGATTSEIAL*QFLGPF
Trigger: AAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGA...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGTCTGAAATTGCTCTTTaGCAGTTTCTGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VHQTQNKGGWQNWREGATSEIAL*QFLGPF
Trigger: AAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGA...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGCTGCTGCTCATGTTCTaGAGGGCATCCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAELLLMF*RASLVC
Trigger: ACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAG...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGGAGACTTTTCAGGCTaGTGCTCATGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEGDFSG*CSCSAG
Trigger: CCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCATGCTATCGCAGATCTTaGTGGCTGGATCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSCYRRS*WLDLRY
Trigger: GTACCTCAGATCCAGCCAGCAAGATCTGCGATAGCA...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTACCTCGACCTCTTTTaGAATCCCTGTAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSYLDLF*NPCRLA
Trigger: AGCAAGTCTACAGGGATTGCAAAAGAGGTCGAGGTA...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCATTCAGGCAACTGGTTTaGTTTTGCTTCCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: HVHQTQNKGGWQNWREGAFRQLV*FCFQGR
Trigger: TCTACCCTGGAAGCAAAAGCAAACCAGTTGCCTGAA...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGATTCAGGCAACTGGTTTaGTTTTGCTTCCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRFRQLV*FCFQGR
Trigger: TCTACCCTGGAAGCAAAAGCAAACCAGTTGCCTGAA...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp TGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACTTCAGGCAACTGGTTTaGTTTTGCTTCCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: CSPDTEQRWVAELAGRSNFRQLV*FCFQGR
Trigger: TCTACCCTGGAAGCAAAAGCAAACCAGTTGCCTGAA...GTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHTGGRR*WWMALI
Trigger: TATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAAACGTATTCAGTGATTaGTGCACAGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGNVFSD*CTGGRR
Trigger: TCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTT...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAACTTTGGGTTTTAGTTaGTCCTTTATTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HQTQNKGGWQNWREGATTTLGFS*SFILPP
Trigger: GGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGT...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGACTTTGGGTTTTAGTTaGTCCTTTATTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKTLGFS*SFILPP
Trigger: GGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGT...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTGGGTGGCTGCATCTTaGAGACTTTTCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEWVAAS*RLFRLL
Trigger: CAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp GTCAGCAGAAAGCAGACAATCAAGCCACCCAGCCACCAGTACGAGTCATATTCTTGGGTGGCTGCATCTTaGAGACTTTTCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VSRKQTIKPPSHQYESYSWVAAS*RLFRLL
Trigger: CAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCA...AGAATATGACTCGTACTGGTGGCTGGGTGGCTTGATTGTCTGCTTTCTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGGGAGGAGATGCTGGTaGATGGCTCTTATATTCTGT +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGGRRCW*MALIFC
Trigger: ACAGAATATAAGAGCCATCCACCAGCATCTCCTCCC...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGGAGGGAGGAGATGCTaGTGGATGGCTCTTATATTC +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSGGRRC*WMALIF
Trigger: GAATATAAGAGCCATCCACCAGCATCTCCTCCCTCC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACGGAGGGAGGAGATGCTaGTGGATGGCTCTTATATTC +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHGGRRC*WMALIF
Trigger: GAATATAAGAGCCATCCACCAGCATCTCCTCCCTCC...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCATTGTTGCTTGTTTGCTaGAGGGTCCAGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: HVHQTQNKGGWQNWREGALLLVC*RVQTLC
Trigger: ACAAAGTGTCTGGACCCTCCAGCAAACAAGCAACAA...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGATTGTTGCTTGTTTGCTaGAGGGTCCAGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRLLLVC*RVQTLC
Trigger: ACAAAGTGTCTGGACCCTCCAGCAAACAAGCAACAA...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGAAGTAAGAGCACCGTaGCTTTCCCTATGCCGAACC +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEEVRAP*LSLCRT
Trigger: GGTTCGGCATAGGGAAAGCCACGGTGCTCTTACTTC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
CDS-3UTR TCA 90 bp AGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTCAACAATCCCAGCATTaGAGGTATCTTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: RHRTKVGGRTGGKEQRQVQQSQH*RYLGSH
Trigger: ATGAGACCCAAGATACCTTCAATGCTGGGATTGTTG...AACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTACAACAATCCCAGCATTaGAGGTATCTTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLQQSQH*RYLGSH
Trigger: ATGAGACCCAAGATACCTTCAATGCTGGGATTGTTG...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCCTCCTTGGAATCAACTaGGATGTCAAAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSLLGIN*DVKVLV
Trigger: AACAAGAACTTTGACATCTCAGTTGATTCCAAGGAG...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACCTCCTTGGAATCAACTaGGATGTCAAAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDLLGIN*DVKVLV
Trigger: AACAAGAACTTTGACATCTCAGTTGATTCCAAGGAG...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAATCAGTCAGGAGTGTTTaGAAGTCTCTGAAATTGCTC +
Preference number: 4 (lower is better)
Translates to: TRHRTKVGGRTGGKEQRQSVRSV*KSLKLL
Trigger: GAGCAATTTCAGAGACTTTCAAACACTCCTGACTGA...TTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGATGCCATCCAGGTCTaGGAATGCCTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEDAIQV*ECLVLG
Trigger: ACCAAGAACAAGGCATTCTCAGACCTGGATGGCATC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAAAAAGAAGGTCACAATaGGAGTCAGCAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: HVHQTQNKGGWQNWREGAKRRSQ*ESAESR
Trigger: TCTGCTTTCTGCTGACTCTCATTGTGACCTTCTTTT...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGAAAAAGAAGGTCACAATaGGAGTCAGCAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRKRRSQ*ESAESR
Trigger: TCTGCTTTCTGCTGACTCTCATTGTGACCTTCTTTT...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATCCAACCCCAGCCATaGGGAAGATGCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMIQPQP*GRCLQC
Trigger: ACACTGGAGGCATCTTCCTCATGGCTGGGGTTGGAT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAACGACATTCTCAAGCTaGAAAGCAGCATATATACCT +
Preference number: 4 (lower is better)
Translates to: HQTQNKGGWQNWREGATTTTFSS*KAAYIP
Trigger: AGGTATATATGCTGCTTTTCAGCTTGAGAATGTCGT...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCACGACATTCTCAAGCTaGAAAGCAGCATATATACCT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSTTFSS*KAAYIP
Trigger: AGGTATATATGCTGCTTTTCAGCTTGAGAATGTCGT...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGATGGTCAATGTTGAAATaGTCACTGACGTTGACGACA +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRWSMLK*SLTLTT
Trigger: TGTCGTCAACGTCAGTGATCATTTCAACATTGACCA...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCATTGGTGAGGAAATGCTaGACAGAGTCCAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSLVRKC*TESKEA
Trigger: TGCCTCTTTGGACTCTGTTCAGCATTTCCTCACCAA...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGGGAAACGTTATTGGTaGGGAAATGCTGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGGKRYW*GNAEQS
Trigger: ACTCTGTTCAGCATTTCCTCACCAATAACGTTTCCC...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGAATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRMSSSL*WHKRPS
Trigger: ACTGGGTCTTTTATGCCATCACAGAGAAGATGACAT...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSMSSSL*WHKRPS
Trigger: ACTGGGTCTTTTATGCCATCACAGAGAAGATGACAT...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGCCTCACAAATTTCAGTaGTTGCTGCACAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEPHKFQ*LLHRRE
Trigger: CTCCCTCCTGTGCAGCAATCACTGAAATTTGTGAGG...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000171543.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCATCTGAAATTGCTCTTTaGCAGTTTCTGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: HVHQTQNKGGWQNWREGASEIAL*QFLGPF
Trigger: AAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGA...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTGCTATCGCAGATCTTaGTGGCTGGATCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAECYRRS*WLDLRY
Trigger: GTACCTCAGATCCAGCCAGCAAGATCTGCGATAGCA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTTACCTCGACCTCTTTTaGAATCCCTGTAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: RHRTKVGGRTGGKEQRQVYLDLF*NPCRLA
Trigger: AGCAAGTCTACAGGGATTGCAAAAGAGGTCGAGGTA...AACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTATTCAGGCAACTGGTTTaGTTTTGCTTCCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLFRQLV*FCFQGR
Trigger: TCTACCCTGGAAGCAAAAGCAAACCAGTTGCCTGAA...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAETGGRR*WWMALI
Trigger: TATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACAACGTATTCAGTGATTaGTGCACAGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHNVFSD*CTGGRR
Trigger: TCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000177946.8
CDS-3UTR CCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGACCTTGTTCTTGGTGTTaGTGTACTGCTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGPCSWC*CTAPLH
Trigger: ATGTAGTGGAGCAGTACACCAACACCAAGAACAAGG...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTACCTTGTTCTTGGTGTTaGTGTACTGCTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLPCSWC*CTAPLH
Trigger: ATGTAGTGGAGCAGTACACCAACACCAAGAACAAGG...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTACTTTGGGTTTTAGTTaGTCCTTTATTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSTLGFS*SFILPP
Trigger: GGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGT...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CAAGCCACCCAGCCACCAGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGGACAGGAGTTACTTTaGGTTTTAGTTGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: QATQPPVRVIFFQLGQLLGQELL*VLVGPL
Trigger: TAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCC...CAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTGGCTGGGTGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGGGAGGAGATGCTGGTaGATGGCTCTTATATTCTGT +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSGRRCW*MALIFC
Trigger: ACAGAATATAAGAGCCATCCACCAGCATCTCCTCCC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGGAGGGAGGAGATGCTaGTGGATGGCTCTTATATTC +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEGGRRC*WMALIF
Trigger: GAATATAAGAGCCATCCACCAGCATCTCCTCCCTCC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
3UTR CAA 72 bp CCACCCAGCCACCAGTACGAGTCATATTCTTCCAGCTaGGGCAGCTCCTGGTTTAAGTATCTGTTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PPSHQYESYSSS*GSSWFKYLLLL
Trigger: TAACAGCAACAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTGGCTGGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR TCA 90 bp AGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTTTATGGAATGCAGGCTaGCCTTCTGAAGAGATCTTT +
Preference number: 4 (lower is better)
Translates to: RHRTKVGGRTGGKEQRQVLWNAG*PSEEIF
Trigger: AAAGATCTCTTCAGAAGGTCAGCCTGCATTCCATAA...AACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTATTATGGAATGCAGGCTaGCCTTCTGAAGAGATCTTT +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLLWNAG*PSEEIF
Trigger: AAAGATCTCTTCAGAAGGTCAGCCTGCATTCCATAA...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCACAACAATCCCAGCATTaGAGGTATCTTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSQQSQH*RYLGSH
Trigger: ATGAGACCCAAGATACCTTCAATGCTGGGATTGTTG...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAATCAGTCAGGAGTGTTTaGAAGTCTCTGAAATTGCTC +
Preference number: 4 (lower is better)
Translates to: MFTRHRTKVGGRTGGKEQSVRSV*KSLKLL
Trigger: GAGCAATTTCAGAGACTTTCAAACACTCCTGACTGA...TTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGAGCTCAGGTTGGTATTaGGCTGGGTGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMSSGWY*AGWLHL
Trigger: AAGATGCAGCCACCCAGCTCAATACCAACCTGAGCT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp TGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACACGACATTCTCAAGCTaGAAAGCAGCATATATACCT +
Preference number: 4 (lower is better)
Translates to: CSPDTEQRWVAELAGRSNTTFSS*KAAYIP
Trigger: AGGTATATATGCTGCTTTTCAGCTTGAGAATGTCGT...GTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGATGGTCAATGTTGAAATaGTCACTGACGTTGACGACA +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGWSMLK*SLTLTT
Trigger: TGTCGTCAACGTCAGTGATCATTTCAACATTGACCA...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTTGGTGAGGAAATGCTaGACAGAGTCCAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAELVRKC*TESKEA
Trigger: TGCCTCTTTGGACTCTGTTCAGCATTTCCTCACCAA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGGGAAACGTTATTGGTaGGGAAATGCTGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSGKRYW*GNAEQS
Trigger: ACTCTGTTCAGCATTTCCTCACCAATAACGTTTCCC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTATCTGAAATTGCTCTTTaGCAGTTTCTGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLSEIAL*QFLGPF
Trigger: AAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGA...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGCTGCTGCTCATGTTCTaGAGGGCATCCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMLLLMF*RASLVC
Trigger: ACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAG...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCATACCTCGACCTCTTTTaGAATCCCTGTAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSYLDLF*NPCRLA
Trigger: AGCAAGTCTACAGGGATTGCAAAAGAGGTCGAGGTA...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACTTCAGGCAACTGGTTTaGTTTTGCTTCCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHFRQLV*FCFQGR
Trigger: TCTACCCTGGAAGCAAAAGCAAACCAGTTGCCTGAA...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACACAAATTTCAGTGATTaGTGCACAGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHTNFSD*CTGGRR
Trigger: TCTCCTCCCTCCTGTGCAGCAATCACTGAAATTTGT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000171543.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGCATTGAAGGTATCTTaGGTCTCATATTTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: CSPDTEQRWVAELAGRSNALKVS*VSYLVV
Trigger: TACCACCAAATATGAGACCCAAGATACCTTCAATGC...GTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCATAGTCAATTTGCTTTaGTGTTTCAGTCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSIVNLL*CFSQEC
Trigger: ACACTCCTGACTGAAACACCAAAGCAAATTGACTAT...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGAGGACAGGAGTTACTTTaGGTTTTAGTTGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRGQELL*VLVGPL
Trigger: TAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCC...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTGGACAGGAGTTACTTTaGGTTTTAGTTGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSGQELL*VLVGPL
Trigger: TAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCC...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAGGACAGGAGTTACTTTaGGTTTTAGTTGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: HVHQTQNKGGWQNWREGAGQELL*VLVGPL
Trigger: TAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCC...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTGGGTGGCTGCATCTTaGAGACTTTTCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMWVAAS*RLFRLL
Trigger: CAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACTTGTTGCTTGTTTGCTaGAGGGTCCAGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHLLLVC*RVQTLC
Trigger: ACAAAGTGTCTGGACCCTCCAGCAAACAAGCAACAA...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGGAAGTAAGAGCACCGTaGCTTTCCCTATGCCGAACC +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMEVRAP*LSLCRT
Trigger: GGTTCGGCATAGGGAAAGCCACGGTGCTCTTACTTC...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
CDS-3UTR TCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACTTATGGAATGCAGGCTaGCCTTCTGAAGAGATCTTT +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHLWNAG*PSEEIF
Trigger: AAAGATCTCTTCAGAAGGTCAGCCTGCATTCCATAA...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGCAACAATCCCAGCATTaGAGGTATCTTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEQQSQH*RYLGSH
Trigger: ATGAGACCCAAGATACCTTCAATGCTGGGATTGTTG...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACTCCTTGGAATCAACTaGGATGTCAAAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: MFTRHRTKVGGRTGGKEQLLGIN*DVKVLV
Trigger: AACAAGAACTTTGACATCTCAGTTGATTCCAAGGAG...TTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACTCAGTCAGGAGTGTTTaGAAGTCTCTGAAATTGCTC +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHSVRSV*KSLKLL
Trigger: GAGCAATTTCAGAGACTTTCAAACACTCCTGACTGA...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp GAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGTTGCTGTTAAGCTCAGGTTGGTATTaGGCTGGGTGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: ESYSSSLGSSWFKYLLLLSSGWY*AGWLHL
Trigger: AAGATGCAGCCACCCAGCTCAATACCAACCTGAGCT...TAACAGCAACAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTACAGTCACTGCTGCTaGGCGAATTCTCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMYSHCC*ANSRCC
Trigger: ACAGCATCGAGAATTCGCTCAGCAGCAGTGACTGTA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACAAAAGAAGGTCACAATaGGAGTCAGCAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHKRRSQ*ESAESR
Trigger: TCTGCTTTCTGCTGACTCTCATTGTGACCTTCTTTT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAAAAAGAAGGTCACAATaGGAGTCAGCAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSKRRSQ*ESAESR
Trigger: TCTGCTTTCTGCTGACTCTCATTGTGACCTTCTTTT...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp AGTGTTTTCACTGCAGTGAGTGCTGACAATTCAAACAGCAGAGATGATGAGAAGATCCAACCCCAGCCATaGGGAAGATGCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SVFTAVSADNSNSRDDEKIQPQP*GRCLQC
Trigger: ACACTGGAGGCATCTTCCTCATGGCTGGGGTTGGAT...CTTCTCATCATCTCTGCTGTTTGAATTGTCAGCACTCACTGCAGTGAAAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAACGACATTCTCAAGCTaGAAAGCAGCATATATACCT +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGTTFSS*KAAYIP
Trigger: AGGTATATATGCTGCTTTTCAGCTTGAGAATGTCGT...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGGGAAACGTTATTGGTaGGGAAATGCTGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEGKRYW*GNAEQS
Trigger: ACTCTGTTCAGCATTTCCTCACCAATAACGTTTCCC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSMSSSL*WHKRPS
Trigger: ACTGGGTCTTTTATGCCATCACAGAGAAGATGACAT...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACTCTGAAATTGCTCTTTaGCAGTTTCTGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHSEIAL*QFLGPF
Trigger: AAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGA...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMTGGRR*WWMALI
Trigger: TATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCATTGAAGGTATCTTaGGTCTCATATTTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGALKVS*VSYLVV
Trigger: TACCACCAAATATGAGACCCAAGATACCTTCAATGC...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGCCTTGTTCTTGGTGTTaGTGTACTGCTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEPCSWC*CTAPLH
Trigger: ATGTAGTGGAGCAGTACACCAACACCAAGAACAAGG...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAACTTTGGGTTTTAGTTaGTCCTTTATTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSTLGFS*SFILPP
Trigger: GGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGT...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCATGACATCCACAGTTTaGTTTTGTATTGTATTGGGT +
Preference number: 4 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSMTSTV*FCIVLG
Trigger: ACCCAATACAATACAAAACCAAACTGTGGATGTCAT...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTTGTTGCTTGTTTGCTaGAGGGTCCAGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAELLLVC*RVQTLC
Trigger: ACAAAGTGTCTGGACCCTCCAGCAAACAAGCAACAA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTTATGGAATGCAGGCTaGCCTTCTGAAGAGATCTTT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAELWNAG*PSEEIF
Trigger: AAAGATCTCTTCAGAAGGTCAGCCTGCATTCCATAA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCACTCCTTGGAATCAACTaGGATGTCAAAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSLLGIN*DVKVLV
Trigger: AACAAGAACTTTGACATCTCAGTTGATTCCAAGGAG...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACCTCCTTGGAATCAACTaGGATGTCAAAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHLLGIN*DVKVLV
Trigger: AACAAGAACTTTGACATCTCAGTTGATTCCAAGGAG...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp AGTGTTTTCACTGCAGTGAGTGCTGACAATTCAAACAGCAGAGATGATGAGAAGAGCTCAGGTTGGTATTaGGCTGGGTGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: SVFTAVSADNSNSRDDEKSSGWY*AGWLHL
Trigger: AAGATGCAGCCACCCAGCTCAATACCAACCTGAGCT...CTTCTCATCATCTCTGCTGTTTGAATTGTCAGCACTCACTGCAGTGAAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp GAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGTTGCTGTTATACAGTCACTGCTGCTaGGCGAATTCTCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: ESYSSSLGSSWFKYLLLLYSHCC*ANSRCC
Trigger: ACAGCATCGAGAATTCGCTCAGCAGCAGTGACTGTA...TAACAGCAACAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR TCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACACGACATTCTCAAGCTaGAAAGCAGCATATATACCT +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHTTFSS*KAAYIP
Trigger: AGGTATATATGCTGCTTTTCAGCTTGAGAATGTCGT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTGGTCAATGTTGAAATaGTCACTGACGTTGACGACA +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEWSMLK*SLTLTT
Trigger: TGTCGTCAACGTCAGTGATCATTTCAACATTGACCA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTTGGTGAGGAAATGCTaGACAGAGTCCAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMLVRKC*TESKEA
Trigger: TGCCTCTTTGGACTCTGTTCAGCATTTCCTCACCAA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEMSSSL*WHKRPS
Trigger: ACTGGGTCTTTTATGCCATCACAGAGAAGATGACAT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTCTGAAATTGCTCTTTaGCAGTTTCTGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAESEIAL*QFLGPF
Trigger: AAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AGTGTTTTCACTGCAGTGAGTGCTGACAATTCAAACAGCAGAGATGATGAGAAGGGAGACTTTTCAGGCTaGTGCTCATGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVFTAVSADNSNSRDDEKGDFSG*CSCSAG
Trigger: CCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCC...CTTCTCATCATCTCTGCTGTTTGAATTGTCAGCACTCACTGCAGTGAAAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197750.5
CDS-3UTR GCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGAACGTATTCAGTGATTaGTGCACAGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMNVFSD*CTGGRR
Trigger: TCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000177946.8
CDS-3UTR CCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGCATTGAAGGTATCTTaGGTCTCATATTTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSALKVS*VSYLVV
Trigger: TACCACCAAATATGAGACCCAAGATACCTTCAATGC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAAATAGTCAATTTGCTTTaGTGTTTCAGTCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: MFTRHRTKVGGRTGGKEQIVNLL*CFSQEC
Trigger: ACACTCCTGACTGAAACACCAAAGCAAATTGACTAT...TTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp GACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTAATAGTCAATTTGCTTTaGTGTTTCAGTCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: DTEQRWVAELAGRSNDKLIVNLL*CFSQEC
Trigger: ACACTCCTGACTGAAACACCAAAGCAAATTGACTAT...TAACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGACTTTGGGTTTTAGTTaGTCCTTTATTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAETLGFS*SFILPP
Trigger: GGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACGGACAGGAGTTACTTTaGGTTTTAGTTGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHGQELL*VLVGPL
Trigger: TAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCC...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGGACAGGAGTTACTTTaGGTTTTAGTTGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSGQELL*VLVGPL
Trigger: TAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTATGACATCCACAGTTTaGTTTTGTATTGTATTGGGT +
Preference number: 4 (lower is better)
Translates to: QTQNKGGWQNWREGATTSMTSTV*FCIVLG
Trigger: ACCCAATACAATACAAAACCAAACTGTGGATGTCAT...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp ACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAATGACATCCACAGTTTaGTTTTGTATTGTATTGGGT +
Preference number: 4 (lower is better)
Translates to: TRHRTKVGGRTGGKEQRQMTSTV*FCIVLG
Trigger: ACCCAATACAATACAAAACCAAACTGTGGATGTCAT...TTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGATCAATAGGAATACTTTaGCTCATGTCCTTAATGTTG +
Preference number: 4 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRSIGIL*LMSLML
Trigger: CAACATTAAGGACATGAGCCAAAGTATTCCTATTGA...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGGGGAGGAGATGCTGGTaGATGGCTCTTATATTCTGT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMGRRCW*MALIFC
Trigger: ACAGAATATAAGAGCCATCCACCAGCATCTCCTCCC...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGCAACAATCCCAGCATTaGAGGTATCTTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMQQSQH*RYLGSH
Trigger: ATGAGACCCAAGATACCTTCAATGCTGGGATTGTTG...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGCTCCTTGGAATCAACTaGGATGTCAAAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAELLGIN*DVKVLV
Trigger: AACAAGAACTTTGACATCTCAGTTGATTCCAAGGAG...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACATCCAACCCCAGCCATaGGGAAGATGCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDIQPQP*GRCLQC
Trigger: ACACTGGAGGCATCTTCCTCATGGCTGGGGTTGGAT...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGACGACATTCTCAAGCTaGAAAGCAGCATATATACCT +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAETTFSS*KAAYIP
Trigger: AGGTATATATGCTGCTTTTCAGCTTGAGAATGTCGT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGGGCGCATTCTGCTTCTaGCGCTGGTGCATCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKGAFCF*RWCISP
Trigger: CGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCC...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDVGPLF*LPARSR
Trigger: TCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAAC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp TCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGTTGCTGTTATTACTGCTGCTCATGTTCTaGAGGGCATCCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SYSSSLGSSWFKYLLLLLLLLMF*RASLVC
Trigger: ACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAG...TAATAACAGCAACAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR GCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTACCTCGACCTCTTTTaGAATCCCTGTAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMYLDLF*NPCRLA
Trigger: AGCAAGTCTACAGGGATTGCAAAAGAGGTCGAGGTA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACATAGTCAATTTGCTTTaGTGTTTCAGTCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHIVNLL*CFSQEC
Trigger: ACACTCCTGACTGAAACACCAAAGCAAATTGACTAT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAATAGTCAATTTGCTTTaGTGTTTCAGTCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSIVNLL*CFSQEC
Trigger: ACACTCCTGACTGAAACACCAAAGCAAATTGACTAT...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGCCTTGTTCTTGGTGTTaGTGTACTGCTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMPCSWC*CTAPLH
Trigger: ATGTAGTGGAGCAGTACACCAACACCAAGAACAAGG...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAAATGACATCCACAGTTTaGTTTTGTATTGTATTGGGT +
Preference number: 4 (lower is better)
Translates to: MFTRHRTKVGGRTGGKEQMTSTV*FCIVLG
Trigger: ACCCAATACAATACAAAACCAAACTGTGGATGTCAT...TTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGATCAATAGGAATACTTTaGCTCATGTCCTTAATGTTG +
Preference number: 4 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGSIGIL*LMSLML
Trigger: CAACATTAAGGACATGAGCCAAAGTATTCCTATTGA...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp ATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAATCAATAGGAATACTTTaGCTCATGTCCTTAATGTTG +
Preference number: 4 (lower is better)
Translates to: MFTRHRTKVGGRTGGKEQSIGIL*LMSLML
Trigger: CAACATTAAGGACATGAGCCAAAGTATTCCTATTGA...TTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTTGTTGCTTGTTTGCTaGAGGGTCCAGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMLLLVC*RVQTLC
Trigger: ACAAAGTGTCTGGACCCTCCAGCAAACAAGCAACAA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTCAGTCAGGAGTGTTTaGAAGTCTCTGAAATTGCTC +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMSVRSV*KSLKLL
Trigger: GAGCAATTTCAGAGACTTTCAAACACTCCTGACTGA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGAAAAGAAGGTCACAATaGGAGTCAGCAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMKRRSQ*ESAESR
Trigger: TCTGCTTTCTGCTGACTCTCATTGTGACCTTCTTTT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCATCCAACCCCAGCCATaGGGAAGATGCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIIQPQP*GRCLQC
Trigger: ACACTGGAGGCATCTTCCTCATGGCTGGGGTTGGAT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTGGTCAATGTTGAAATaGTCACTGACGTTGACGACA +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMWSMLK*SLTLTT
Trigger: TGTCGTCAACGTCAGTGATCATTTCAACATTGACCA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMMSSSL*WHKRPS
Trigger: ACTGGGTCTTTTATGCCATCACAGAGAAGATGACAT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTCCACTGATGGGAGCTaGCTTGAATTGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDSTDGS*LELRLL
Trigger: GAGCAGCCTCAATTCAAGTCAGCTCCCATCAGTGGA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGCCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKPARSR*HPGLRM
Trigger: CATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGG...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIVGPLF*LPARSR
Trigger: TCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAAC...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGTTGCTGTACTTTGGGTTTTAGTTaGTCCTTTATTCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TSHILPAWAAPGLSICCCTLGFS*SFILPP
Trigger: GGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGT...ACAGCAACAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CCA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAATGACATCCACAGTTTaGTTTTGTATTGTATTGGGT +
Preference number: 4 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSMTSTV*FCIVLG
Trigger: ACCCAATACAATACAAAACCAAACTGTGGATGTCAT...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGAAGTAAGAGCACCGTaGCTTTCCCTATGCCGAACC +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDEVRAP*LSLCRT
Trigger: GGTTCGGCATAGGGAAAGCCACGGTGCTCTTACTTC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGCTCCTTGGAATCAACTaGGATGTCAAAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMLLGIN*DVKVLV
Trigger: AACAAGAACTTTGACATCTCAGTTGATTCCAAGGAG...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGATGCCATCCAGGTCTaGGAATGCCTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDDAIQV*ECLVLG
Trigger: ACCAAGAACAAGGCATTCTCAGACCTGGATGGCATC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCAGCTCAGGTTGGTATTaGGCTGGGTGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHISSGWY*AGWLHL
Trigger: AAGATGCAGCCACCCAGCTCAATACCAACCTGAGCT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTACAGTCACTGCTGCTaGGCGAATTCTCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDYSHCC*ANSRCC
Trigger: ACAGCATCGAGAATTCGCTCAGCAGCAGTGACTGTA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGATCCAACCCCAGCCATaGGGAAGATGCCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKIQPQP*GRCLQC
Trigger: ACACTGGAGGCATCTTCCTCATGGCTGGGGTTGGAT...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGACGACATTCTCAAGCTaGAAAGCAGCATATATACCT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMTTFSS*KAAYIP
Trigger: AGGTATATATGCTGCTTTTCAGCTTGAGAATGTCGT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTCCACTGATGGGAGCTaGCTTGAATTGAGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHISTDGS*LELRLL
Trigger: GAGCAGCCTCAATTCAAGTCAGCTCCCATCAGTGGA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCGGAGACTTTTCAGGCTaGTGCTCATGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIGDFSG*CSCSAG
Trigger: CCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCC...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTGCTATCGCAGATCTTaGTGGCTGGATCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDCYRRS*WLDLRY
Trigger: GTACCTCAGATCCAGCCAGCAAGATCTGCGATAGCA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDTGGRR*WWMALI
Trigger: TATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGT...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGGCATTGAAGGTATCTTaGGTCTCATATTTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMALKVS*VSYLVV
Trigger: TACCACCAAATATGAGACCCAAGATACCTTCAATGC...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTGGGTGGCTGCATCTTaGAGACTTTTCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIWVAAS*RLFRLL
Trigger: CAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTCAATAGGAATACTTTaGCTCATGTCCTTAATGTTG +
Preference number: 4 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAESIGIL*LMSLML
Trigger: CAACATTAAGGACATGAGCCAAAGTATTCCTATTGA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGGAGGGAGGAGATGCTaGTGGATGGCTCTTATATTC +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDGGRRC*WMALIF
Trigger: GAATATAAGAGCCATCCACCAGCATCTCCTCCCTCC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCGAAGTAAGAGCACCGTaGCTTTCCCTATGCCGAACC +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIEVRAP*LSLCRT
Trigger: GGTTCGGCATAGGGAAAGCCACGGTGCTCTTACTTC...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCGATGCCATCCAGGTCTaGGAATGCCTTGTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIDAIQV*ECLVLG
Trigger: ACCAAGAACAAGGCATTCTCAGACCTGGATGGCATC...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGAGCTCAGGTTGGTATTaGGCTGGGTGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKSSGWY*AGWLHL
Trigger: AAGATGCAGCCACCCAGCTCAATACCAACCTGAGCT...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTACAGTCACTGCTGCTaGGCGAATTCTCGATGCTGT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIYSHCC*ANSRCC
Trigger: ACAGCATCGAGAATTCGCTCAGCAGCAGTGACTGTA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp AGTGTTTTCACTGCAGTGAGTGCTGACAATTCAAACAGCAGAGATGATGAGAAGAAAAGAAGGTCACAATaGGAGTCAGCAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SVFTAVSADNSNSRDDEKKRRSQ*ESAESR
Trigger: TCTGCTTTCTGCTGACTCTCATTGTGACCTTCTTTT...CTTCTCATCATCTCTGCTGTTTGAATTGTCAGCACTCACTGCAGTGAAAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTTGGTGAGGAAATGCTaGACAGAGTCCAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDLVRKC*TESKEA
Trigger: TGCCTCTTTGGACTCTGTTCAGCATTTCCTCACCAA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGCTGCTGCTCATGTTCTaGAGGGCATCCTTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKLLLMF*RASLVC
Trigger: ACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAG...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGGGAGACTTTTCAGGCTaGTGCTCATGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKGDFSG*CSCSAG
Trigger: CCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCC...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATA +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHITGGRR*WWMALI
Trigger: TATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATAGTCAATTTGCTTTaGTGTTTCAGTCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMIVNLL*CFSQEC
Trigger: ACACTCCTGACTGAAACACCAAAGCAAATTGACTAT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGTTGCTGTTATTACCTTGTTCTTGGTGTTaGTGTACTGCTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: SYSSSLGSSWFKYLLLLLPCSWC*CTAPLH
Trigger: ATGTAGTGGAGCAGTACACCAACACCAAGAACAAGG...TAATAACAGCAACAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGGGAGGAGATGCTGGTaGATGGCTCTTATATTCTGT +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDGRRCW*MALIFC
Trigger: ACAGAATATAAGAGCCATCCACCAGCATCTCCTCCC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGGGAAACGTTATTGGTaGGGAAATGCTGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDGKRYW*GNAEQS
Trigger: ACTCTGTTCAGCATTTCCTCACCAATAACGTTTCCC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGTGCTATCGCAGATCTTaGTGGCTGGATCTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKCYRRS*WLDLRY
Trigger: GTACCTCAGATCCAGCCAGCAAGATCTGCGATAGCA...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTTCAGGCAACTGGTTTaGTTTTGCTTCCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDFRQLV*FCFQGR
Trigger: TCTACCCTGGAAGCAAAAGCAAACCAGTTGCCTGAA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCAACGTATTCAGTGATTaGTGCACAGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHINVFSD*CTGGRR
Trigger: TCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000177946.8
CDS-3UTR CCA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATGACATCCACAGTTTaGTTTTGTATTGTATTGGGT +
Preference number: 4 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMMTSTV*FCIVLG
Trigger: ACCCAATACAATACAAAACCAAACTGTGGATGTCAT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp AGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGTTGCATGACATCCACAGTTTaGTTTTGTATTGTATTGGGT +
Preference number: 4 (lower is better)
Translates to: STSHILPAWAAPGLSICCMTSTV*FCIVLG
Trigger: ACCCAATACAATACAAAACCAAACTGTGGATGTCAT...GCAACAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCCAACAATCCCAGCATTaGAGGTATCTTGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIQQSQH*RYLGSH
Trigger: ATGAGACCCAAGATACCTTCAATGCTGGGATTGTTG...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTCAGTCAGGAGTGTTTaGAAGTCTCTGAAATTGCTC +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDSVRSV*KSLKLL
Trigger: GAGCAATTTCAGAGACTTTCAAACACTCCTGACTGA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTGGTCAATGTTGAAATaGTCACTGACGTTGACGACA +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDWSMLK*SLTLTT
Trigger: TGTCGTCAACGTCAGTGATCATTTCAACATTGACCA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGTTGGTGAGGAAATGCTaGACAGAGTCCAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKLVRKC*TESKEA
Trigger: TGCCTCTTTGGACTCTGTTCAGCATTTCCTCACCAA...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCGGGAAACGTTATTGGTaGGGAAATGCTGAACAGAGT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIGKRYW*GNAEQS
Trigger: ACTCTGTTCAGCATTTCCTCACCAATAACGTTTCCC...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDMSSSL*WHKRPS
Trigger: ACTGGGTCTTTTATGCCATCACAGAGAAGATGACAT...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTCTGAAATTGCTCTTTaGCAGTTTCTGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDSEIAL*QFLGPF
Trigger: AAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTACCTCGACCTCTTTTaGAATCCCTGTAGACTTGCT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIYLDLF*NPCRLA
Trigger: AGCAAGTCTACAGGGATTGCAAAAGAGGTCGAGGTA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTTCAGGCAACTGGTTTaGTTTTGCTTCCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIFRQLV*FCFQGR
Trigger: TCTACCCTGGAAGCAAAAGCAAACCAGTTGCCTGAA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGAACGTATTCAGTGATTaGTGCACAGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKNVFSD*CTGGRR
Trigger: TCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTT...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000177946.8
CDS-3UTR GCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAAATTTCAGTGATTaGTGCACAGGAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHITNFSD*CTGGRR
Trigger: TCTCCTCCCTCCTGTGCAGCAATCACTGAAATTTGT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000171543.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCCCTTGTTCTTGGTGTTaGTGTACTGCTCCACTACAT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIPCSWC*CTAPLH
Trigger: ATGTAGTGGAGCAGTACACCAACACCAAGAACAAGG...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGGGGAGGAGATGCTGGTaGATGGCTCTTATATTCTGT +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKGRRCW*MALIFC
Trigger: ACAGAATATAAGAGCCATCCACCAGCATCTCCTCCC...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTTGTTGCTTGTTTGCTaGAGGGTCCAGACACTTTGT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHILLLVC*RVQTLC
Trigger: ACAAAGTGTCTGGACCCTCCAGCAAACAAGCAACAA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTTATGGAATGCAGGCTaGCCTTCTGAAGAGATCTTT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHILWNAG*PSEEIF
Trigger: AAAGATCTCTTCAGAAGGTCAGCCTGCATTCCATAA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTCAGTCAGGAGTGTTTaGAAGTCTCTGAAATTGCTC +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHISVRSV*KSLKLL
Trigger: GAGCAATTTCAGAGACTTTCAAACACTCCTGACTGA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCAAAAGAAGGTCACAATaGGAGTCAGCAGAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIKRRSQ*ESAESR
Trigger: TCTGCTTTCTGCTGACTCTCATTGTGACCTTCTTTT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTGGTCAATGTTGAAATaGTCACTGACGTTGACGACA +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIWSMLK*SLTLTT
Trigger: TGTCGTCAACGTCAGTGATCATTTCAACATTGACCA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTCTGAAATTGCTCTTTaGCAGTTTCTGGGTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHISEIAL*QFLGPF
Trigger: AAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR GCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGTTCAGGCAACTGGTTTaGTTTTGCTTCCAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKFRQLV*FCFQGR
Trigger: TCTACCCTGGAAGCAAAAGCAAACCAGTTGCCTGAA...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGCATTGAAGGTATCTTaGGTCTCATATTTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDALKVS*VSYLVV
Trigger: TACCACCAAATATGAGACCCAAGATACCTTCAATGC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGGACAGGAGTTACTTTaGGTTTTAGTTGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDGQELL*VLVGPL
Trigger: TAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp AGTGTTTTCACTGCAGTGAGTGCTGACAATTCAAACAGCAGAGATGATGAGAAGTCAATAGGAATACTTTaGCTCATGTCCTTAATGTTG +
Preference number: 4 (lower is better)
Translates to: SVFTAVSADNSNSRDDEKSIGIL*LMSLML
Trigger: CAACATTAAGGACATGAGCCAAAGTATTCCTATTGA...CTTCTCATCATCTCTGCTGTTTGAATTGTCAGCACTCACTGCAGTGAAAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197750.5
CDS-3UTR TCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCCTCCTTGGAATCAACTaGGATGTCAAAGTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHILLGIN*DVKVLV
Trigger: AACAAGAACTTTGACATCTCAGTTGATTCCAAGGAG...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGTGGTCAATGTTGAAATaGTCACTGACGTTGACGACA +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKWSMLK*SLTLTT
Trigger: TGTCGTCAACGTCAGTGATCATTTCAACATTGACCA...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR TCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGT +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKMSSSL*WHKRPS
Trigger: ACTGGGTCTTTTATGCCATCACAGAGAAGATGACAT...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCGGACAGGAGTTACTTTaGGTTTTAGTTGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIGQELL*VLVGPL
Trigger: TAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCC...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCATAGTCAATTTGCTTTaGTGTTTCAGTCAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIIVNLL*CFSQEC
Trigger: ACACTCCTGACTGAAACACCAAAGCAAATTGACTAT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGGGACAGGAGTTACTTTaGGTTTTAGTTGGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKGQELL*VLVGPL
Trigger: TAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCC...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACATGACATCCACAGTTTaGTTTTGTATTGTATTGGGT +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDMTSTV*FCIVLG
Trigger: ACCCAATACAATACAAAACCAAACTGTGGATGTCAT...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTCAATAGGAATACTTTaGCTCATGTCCTTAATGTTG +
Preference number: 4 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDSIGIL*LMSLML
Trigger: CAACATTAAGGACATGAGCCAAAGTATTCCTATTGA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCATGACATCCACAGTTTaGTTTTGTATTGTATTGGGT +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIMTSTV*FCIVLG
Trigger: ACCCAATACAATACAAAACCAAACTGTGGATGTCAT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTCAATAGGAATACTTTaGCTCATGTCCTTAATGTTG +
Preference number: 4 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHISIGIL*LMSLML
Trigger: CAACATTAAGGACATGAGCCAAAGTATTCCTATTGA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGATGACATCCACAGTTTaGTTTTGTATTGTATTGGGT +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKMTSTV*FCIVLG
Trigger: ACCCAATACAATACAAAACCAAACTGTGGATGTCAT...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CCA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGTCAATAGGAATACTTTaGCTCATGTCCTTAATGTTG +
Preference number: 4 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKSIGIL*LMSLML
Trigger: CAACATTAAGGACATGAGCCAAAGTATTCCTATTGA...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS GCA 90 bp AGGGAGAGGCCCAAGCACTTCCTCCTGCATGGCGCATTCTGCTTCTaGCGCTGGTGCATCTCTCCGCCGCATTTGTTGCAGCAACGGCAC +
Preference number: 5 (lower is better)
Translates to: RERPKHFLLHGAFCF*RWCISPPHLLQQRH
Trigger: GTGCCGTTGCTGCAACAAATGCGGCGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCCATGCAGGAGGAAGTGCTTGGGCCTCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 90 bp ACCAGGAGGGAGAGGCCCAAGCACTTCCTCCTGCATGGCGCATTCTaGTTCTGCCGCTGGTGCATCTCTCCGCCGCATTTGTTGCAGCAA +
Preference number: 5 (lower is better)
Translates to: TRRERPKHFLLHGAF*FCRWCISPPHLLQQ
Trigger: TTGCTGCAACAAATGCGGCGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCCATGCAGGAGGAAGTGCTTGGGCCTCTCCCTCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 90 bp CAGACAAATCACCAGGAGGGAGAGGCCCAAGCACTTCCTCCTGCATaGCGCATTCTGCTTCTGCCGCTGGTGCATCTCTCCGCCGCATTT +
Preference number: 5 (lower is better)
Translates to: QTNHQEGEAQALPPA*RILLLPLVHLSAAF
Trigger: AAATGCGGCGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCCATGCAGGAGGAAGTGCTTGGGCCTCTCCCTCCTGGTGATTTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGCTGGGTGGCTGCATCTaGGAGACTTTTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: VHQTQNKGGWQNWREGATLGGCI*ETFQAA
Trigger: AGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAG...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDELRLV*SWVAAS
Trigger: AGATGCAGCCACCCAGCTCAATACCAACCTGAGCTC...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGCTCACAGAGCTCAGGTaGGTATTGAGCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VHQTQNKGGWQNWREGATLTELR*VLSWVA
Trigger: AGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAG...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTCTGCAGGGCATCCTaGGTCTGTTTGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKFCRAS*VCLMAV
Trigger: GACAGCCATCAAACAGACCAAGGATGCCCTGCAGAA...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACATTCTGCAGGGCATCCTaGGTCTGTTTGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: HQTQNKGGWQNWREGATTFCRAS*VCLMAV
Trigger: GACAGCCATCAAACAGACCAAGGATGCCCTGCAGAA...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTCTGGGTGGCTGCATCTaGGAGACTTTTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: QTQNKGGWQNWREGATTSLGGCI*ETFQAA
Trigger: AGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAG...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp TGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: CSPDTEQRWVAELAGRSNELRLV*SWVAAS
Trigger: AGATGCAGCCACCCAGCTCAATACCAACCTGAGCTC...GTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: QTQNKGGWQNWREGATTSELRLV*SWVAAS
Trigger: AGATGCAGCCACCCAGCTCAATACCAACCTGAGCTC...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCACTCACAGAGCTCAGGTaGGTATTGAGCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: HVHQTQNKGGWQNWREGALTELR*VLSWVA
Trigger: AGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAG...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp TGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCTCACAGAGCTCAGGTaGGTATTGAGCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: CMFTRHRTKVGGRTGGKELTELR*VLSWVA
Trigger: AGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAG...CTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGGCCTTGTTCTTGGTGTaGGTGTACTGCTCCACTACA +
Preference number: 5 (lower is better)
Translates to: VHQTQNKGGWQNWREGATALFLV*VYCSTT
Trigger: TGTAGTGGAGCAGTACACCAACACCAAGAACAAGGC...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCGCCTTGTTCTTGGTGTaGGTGTACTGCTCCACTACA +
Preference number: 5 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSALFLV*VYCSTT
Trigger: TGTAGTGGAGCAGTACACCAACACCAAGAACAAGGC...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGGAGAATGCCTTGTTCTaGGTGTTGGTGTACTGCTCC +
Preference number: 5 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKENALF*VLVYCS
Trigger: GGAGCAGTACACCAACACCAAGAACAAGGCATTCTC...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAGAGAATGCCTTGTTCTaGGTGTTGGTGTACTGCTCC +
Preference number: 5 (lower is better)
Translates to: HQTQNKGGWQNWREGATTENALF*VLVYCS
Trigger: GGAGCAGTACACCAACACCAAGAACAAGGCATTCTC...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAATTCTGCAGGGCATCCTaGGTCTGTTTGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: TRHRTKVGGRTGGKEQRQFCRAS*VCLMAV
Trigger: GACAGCCATCAAACAGACCAAGGATGCCCTGCAGAA...TTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCATTCTGCAGGGCATCCTaGGTCTGTTTGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: HVHQTQNKGGWQNWREGAFCRAS*VCLMAV
Trigger: GACAGCCATCAAACAGACCAAGGATGCCCTGCAGAA...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGACTGGGTGGCTGCATCTaGGAGACTTTTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGLGGCI*ETFQAA
Trigger: AGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAG...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 90 bp GATGCTGTTTCTCACAGAGCTCAGGTTGGTATTGAGCTGGGTGGCTaGATCTTGGAGACTTTTCAGGCTGCTGCTCATGTTCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: DAVSHRAQVGIELGG*ILETFQAAAHVLQG
Trigger: GCCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAGAAACAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CCA 90 bp CATGAGGAAGATGCCTCCAGTGTTGGACACACAGCCTCTTCTAGTTaGGGTGGCATGCTTGTCATAGCCAAACACACCACACAGCAAGCC +
Preference number: 5 (lower is better)
Translates to: HEEDASSVGHTASSS*GGMLVIAKHTTQQA
Trigger: GGCTTGCTGTGTGGTGTGTTTGGCTATGACAAGCATGCCACCCCAACTAGAAGAGGCTGTGTGTCCAACACTGGAGGCATCTTCCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTGCCTTGTTCTTGGTGTaGGTGTACTGCTCCACTACA +
Preference number: 5 (lower is better)
Translates to: QTQNKGGWQNWREGATTSALFLV*VYCSTT
Trigger: TGTAGTGGAGCAGTACACCAACACCAAGAACAAGGC...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGAGAATGCCTTGTTCTaGGTGTTGGTGTACTGCTCC +
Preference number: 5 (lower is better)
Translates to: TRHRTKVGGRTGGKEQRQENALF*VLVYCS
Trigger: GGAGCAGTACACCAACACCAAGAACAAGGCATTCTC...TTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CCACCCAGCCACCAGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTGAGAATGCCTTGTTCTaGGTGTTGGTGTACTGCTCC +
Preference number: 5 (lower is better)
Translates to: PPSHQYESYSSSLGSSWFENALF*VLVYCS
Trigger: GGAGCAGTACACCAACACCAAGAACAAGGCATTCTC...AAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTGGCTGGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGAGGTCTGAGAATGCCTaGTTCTTGGTGTTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: VHQTQNKGGWQNWREGATRSENA*FLVLVY
Trigger: GTACACCAACACCAAGAACAAGGCATTCTCAGACCT...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGGTCTGAGAATGCCTaGTTCTTGGTGTTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: HQTQNKGGWQNWREGATTRSENA*FLVLVY
Trigger: GTACACCAACACCAAGAACAAGGCATTCTCAGACCT...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACCTGGGTGGCTGCATCTaGGAGACTTTTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHLGGCI*ETFQAA
Trigger: AGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAG...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHELRLV*SWVAAS
Trigger: AGATGCAGCCACCCAGCTCAATACCAACCTGAGCTC...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCACTCACAGAGCTCAGGTaGGTATTGAGCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSLTELR*VLSWVA
Trigger: AGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAG...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTCATATTCTTCCAGCTaGGGCAGCTCCTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKSYSSS*GSSWFK
Trigger: CTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACTCATATTCTTCCAGCTaGGGCAGCTCCTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDSYSSS*GSSWFK
Trigger: CTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTACTTTCTCCGGCAACTaGTTGCTTGTTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: QTQNKGGWQNWREGATTSTFSGN*LLVCWR
Trigger: CCTCCAGCAAACAAGCAACAAGTTGCCGGAGAAAGT...ACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAACTTTCTCCGGCAACTaGTTGCTTGTTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: TRHRTKVGGRTGGKEQRQTFSGN*LLVCWR
Trigger: CCTCCAGCAAACAAGCAACAAGTTGCCGGAGAAAGT...TTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 90 bp CTTCGAGGACAGGAGTTACTTTGGGTTTTAGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGATGCCATCCAGGTCTGAGAATGCCT +
Preference number: 5 (lower is better)
Translates to: LRGQELLWVLVGPLF*LPARSRCHPGLRMP
Trigger: AGGCATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCCTCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CCA 90 bp TTTCTCACAGAGCTCAGGTTGGTATTGAGCTGGGTGGCTGCATCTTaGAGACTTTTCAGGCTGCTGCTCATGTTCTGCAGGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: FLTELRLVLSWVAAS*RLFRLLLMFCRASL
Trigger: CAAGGATGCCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp ATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAAGCCTTGTTCTTGGTGTaGGTGTACTGCTCCACTACA +
Preference number: 5 (lower is better)
Translates to: MFTRHRTKVGGRTGGKEQALFLV*VYCSTT
Trigger: TGTAGTGGAGCAGTACACCAACACCAAGAACAAGGC...TTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp TGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGAGGTCTGAGAATGCCTaGTTCTTGGTGTTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: CMFTRHRTKVGGRTGGKERSENA*FLVLVY
Trigger: GTACACCAACACCAAGAACAAGGCATTCTCAGACCT...CTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAAGGTCTGAGAATGCCTaGTTCTTGGTGTTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: HVHQTQNKGGWQNWREGARSENA*FLVLVY
Trigger: GTACACCAACACCAAGAACAAGGCATTCTCAGACCT...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCATTCTGCAGGGCATCCTaGGTCTGTTTGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSFCRAS*VCLMAV
Trigger: GACAGCCATCAAACAGACCAAGGATGCCCTGCAGAA...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGCTGGGTGGCTGCATCTaGGAGACTTTTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAELGGCI*ETFQAA
Trigger: AGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAG...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEELRLV*SWVAAS
Trigger: AGATGCAGCCACCCAGCTCAATACCAACCTGAGCTC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGCTCACAGAGCTCAGGTaGGTATTGAGCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAELTELR*VLSWVA
Trigger: AGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAG...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGATCATATTCTTCCAGCTaGGGCAGCTCCTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRSYSSS*GSSWFK
Trigger: CTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCATCATATTCTTCCAGCTaGGGCAGCTCCTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: HVHQTQNKGGWQNWREGASYSSS*GSSWFK
Trigger: CTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAAACTTTCTCCGGCAACTaGTTGCTTGTTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: MFTRHRTKVGGRTGGKEQTFSGN*LLVCWR
Trigger: CCTCCAGCAAACAAGCAACAAGTTGCCGGAGAAAGT...TTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 90 bp TGGGTTTTAGTTGGTCCTTTATTCTGCCTCCCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATGCCTTGTTCTTGGTGTTGGTGTACT +
Preference number: 5 (lower is better)
Translates to: WVLVGPLFCLPARSR*HPGLRMPCSWCWCT
Trigger: AGTACACCAACACCAAGAACAAGGCATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAACTAAAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CCA 90 bp ATGGCCTTAATCTCTTCGAGGACAGGAGTTACTTTGGGTTTTAGTTaGTCCTTTATTCTGCCTCCCAGCACGGAGCCGATGCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: MALISSRTGVTLGFS*SFILPPSTEPMPSR
Trigger: CCTGGATGGCATCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCCTCGAAGAGATTAAGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp CACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACACATAGTCAATTTGCTTaGGTGTTTCAGTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: HQTQNKGGWQNWREGATTHSQFA*VFQSGV
Trigger: CACTCCTGACTGAAACACCAAAGCAAATTGACTATG...TGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGCCTTGTTCTTGGTGTaGGTGTACTGCTCCACTACA +
Preference number: 5 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSALFLV*VYCSTT
Trigger: TGTAGTGGAGCAGTACACCAACACCAAGAACAAGGC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACGAGAATGCCTTGTTCTaGGTGTTGGTGTACTGCTCC +
Preference number: 5 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHENALF*VLVYCS
Trigger: GGAGCAGTACACCAACACCAAGAACAAGGCATTCTC...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGAGAATGCCTTGTTCTaGGTGTTGGTGTACTGCTCC +
Preference number: 5 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSENALF*VLVYCS
Trigger: GGAGCAGTACACCAACACCAAGAACAAGGCATTCTC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTTCTGCAGGGCATCCTaGGTCTGTTTGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEFCRAS*VCLMAV
Trigger: GACAGCCATCAAACAGACCAAGGATGCCCTGCAGAA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CACCAGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGCTGGGTGGCTGCATCTaGGAGACTTTTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: HQYESYSSSLGSSWFKYLLGGCI*ETFQAA
Trigger: AGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAG...CAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp CACCAGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: HQYESYSSSLGSSWFKYLELRLV*SWVAAS
Trigger: AGATGCAGCCACCCAGCTCAATACCAACCTGAGCTC...CAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp CACCAGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGCTCACAGAGCTCAGGTaGGTATTGAGCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: HQYESYSSSLGSSWFKYLLTELR*VLSWVA
Trigger: AGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAG...CAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGGCCAGAAAGATAAAATaGCCATTGTTCCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKARKIK*PLFLEQ
Trigger: CTGCTCAAGGAACAATGGCAATTTTATCTTTCTGGC...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAACTTTCTCCGGCAACTaGTTGCTTGTTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSTFSGN*LLVCWR
Trigger: CCTCCAGCAAACAAGCAACAAGTTGCCGGAGAAAGT...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACACTTTCTCCGGCAACTaGTTGCTTGTTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHTFSGN*LLVCWR
Trigger: CCTCCAGCAAACAAGCAACAAGTTGCCGGAGAAAGT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS TCA 90 bp GAAATGCCACATCCCCGAGACGGACGAGTCGTCGTATACATCCTCTaGATCCATCCTGCGATAGTACTTGGCCAGCTTGATAGCAATGAT +
Preference number: 5 (lower is better)
Translates to: EMPHPRDGRVVVYIL*IHPAIVLGQLDSND
Trigger: ATCATTGCTATCAAGCTGGCCAAGTACTATCGCAGGATGGATTCAGAGGATGTATACGACGACTCGTCCGTCTCGGGGATGTGGCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 90 bp GAATTCTCGATGCTGTTTCTCACAGAGCTCAGGTTGGTATTGAGCTaGGTGGCTGCATCTTGGAGACTTTTCAGGCTGCTGCTCATGTTC +
Preference number: 5 (lower is better)
Translates to: EFSMLFLTELRLVLS*VAASWRLFRLLLMF
Trigger: GAACATGAGCAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAGAAACAGCATCGAGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACTTCAGTCAGGAGTGTTaGAAAGTCTCTGAAATTGCT +
Preference number: 5 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDFSQEC*KVSEIA
Trigger: AGCAATTTCAGAGACTTTCAAACACTCCTGACTGAA...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAACATAGTCAATTTGCTTaGGTGTTTCAGTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: TRHRTKVGGRTGGKEQRQHSQFA*VFQSGV
Trigger: CACTCCTGACTGAAACACCAAAGCAAATTGACTATG...TTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACATAGTCAATTTGCTTaGGTGTTTCAGTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRHSQFA*VFQSGV
Trigger: CACTCCTGACTGAAACACCAAAGCAAATTGACTATG...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGCCTTGTTCTTGGTGTaGGTGTACTGCTCCACTACA +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEALFLV*VYCSTT
Trigger: TGTAGTGGAGCAGTACACCAACACCAAGAACAAGGC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGGAGAATGCCTTGTTCTaGGTGTTGGTGTACTGCTCC +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEENALF*VLVYCS
Trigger: GGAGCAGTACACCAACACCAAGAACAAGGCATTCTC...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACAGGTCTGAGAATGCCTaGTTCTTGGTGTTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHRSENA*FLVLVY
Trigger: GTACACCAACACCAAGAACAAGGCATTCTCAGACCT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGCTCACAGAGCTCAGGTaGGTATTGAGCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMLTELR*VLSWVA
Trigger: AGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAG...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGGATGACATCCACAGTTaGGTTTTGTATTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: VHQTQNKGGWQNWREGATDDIHS*VLYCIG
Trigger: CCCAATACAATACAAAACCAAACTGTGGATGTCATC...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCATCATATTCTTCCAGCTaGGGCAGCTCCTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSSYSSS*GSSWFK
Trigger: CTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGACTTTCTCCGGCAACTaGTTGCTTGTTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAETFSGN*LLVCWR
Trigger: CCTCCAGCAAACAAGCAACAAGTTGCCGGAGAAAGT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACCAAAGTAGCCTAGTATaGTTTTCCCAAACTTCTTCG +
Preference number: 5 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDQSSLV*FSQTSS
Trigger: CGAAGAAGTTTGGGAAAACAATACTAGGCTACTTTG...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp GCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCCAAAGTAGCCTAGTATaGTTTTCCCAAACTTCTTCG +
Preference number: 5 (lower is better)
Translates to: ACSPDTEQRWVAELAGRSQSSLV*FSQTSS
Trigger: CGAAGAAGTTTGGGAAAACAATACTAGGCTACTTTG...GCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGACTTCAGTAACAGTGTaGAGTTCTCTATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: PDTEQRWVAELAGRSNDKTSVTV*SSLSTD
Trigger: ATCAGTGGATAGAGAACTCAACACTGTTACTGAAGT...CTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087442.11
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp AGCCACCCAGCCACCAGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTACTTCAGTAACAGTGTaGAGTTCTCTATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: SHPATSTSHILPAWAAPGTSVTV*SSLSTD
Trigger: ATCAGTGGATAGAGAACTCAACACTGTTACTGAAGT...ACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTGGCTGGGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS GCA 90 bp TGCTGGAGGGTCCAGACACTTTGTCTTAACGTATTCAGTGATTGCTaGACAGGAGGGAGGAGATGCTGGTGGATGGCTCTTATATTCTGT +
Preference number: 5 (lower is better)
Translates to: CWRVQTLCLNVFSDC*TGGRRCWWMALIFC
Trigger: ACAGAATATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTTAAGACAAAGTGTCTGGACCCTCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000177946.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCATTCAGTCAGGAGTGTTaGAAAGTCTCTGAAATTGCT +
Preference number: 5 (lower is better)
Translates to: HVHQTQNKGGWQNWREGAFSQEC*KVSEIA
Trigger: AGCAATTTCAGAGACTTTCAAACACTCCTGACTGAA...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CACCAGTACGAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGGCCTTGTTCTTGGTGTaGGTGTACTGCTCCACTACA +
Preference number: 5 (lower is better)
Translates to: HQYESYSSSLGSSWFKYLALFLV*VYCSTT
Trigger: TGTAGTGGAGCAGTACACCAACACCAAGAACAAGGC...CAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTCGTACTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGAGGTCTGAGAATGCCTaGTTCTTGGTGTTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAERSENA*FLVLVY
Trigger: GTACACCAACACCAAGAACAAGGCATTCTCAGACCT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AGCAGAAAGCAGACAATCAAGCCACCCAGCCACCAGTACGAGTCATATTCTTCCAGGTCTGAGAATGCCTaGTTCTTGGTGTTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SRKQTIKPPSHQYESYSSRSENA*FLVLVY
Trigger: GTACACCAACACCAAGAACAAGGCATTCTCAGACCT...GGAAGAATATGACTCGTACTGGTGGCTGGGTGGCTTGATTGTCTGCTTTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTTCTGCAGGGCATCCTaGGTCTGTTTGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMFCRAS*VCLMAV
Trigger: GACAGCCATCAAACAGACCAAGGATGCCCTGCAGAA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGAGATGACATCCACAGTTaGGTTTTGTATTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRDDIHS*VLYCIG
Trigger: CCCAATACAATACAAAACCAAACTGTGGATGTCATC...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTCATATTCTTCCAGCTaGGGCAGCTCCTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAESYSSS*GSSWFK
Trigger: CTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACAAGATAAAATTGCCATaGTTCCTTGAGCAGATAGGG +
Preference number: 5 (lower is better)
Translates to: CSPDTEQRWVAELAGRSNKIKLP*FLEQIG
Trigger: CCCTATCTGCTCAAGGAACAATGGCAATTTTATCTT...GTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp TTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGAAAGATAAAATTGCCATaGTTCCTTGAGCAGATAGGG +
Preference number: 5 (lower is better)
Translates to: FTRHRTKVGGRTGGKEQRKIKLP*FLEQIG
Trigger: CCCTATCTGCTCAAGGAACAATGGCAATTTTATCTT...TCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp AGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTGCCAGAAAGATAAAATaGCCATTGTTCCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: RHRTKVGGRTGGKEQRQVARKIK*PLFLEQ
Trigger: CTGCTCAAGGAACAATGGCAATTTTATCTTTCTGGC...AACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCCAGAAAGATAAAATaGCCATTGTTCCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGARKIK*PLFLEQ
Trigger: CTGCTCAAGGAACAATGGCAATTTTATCTTTCTGGC...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp GTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGTTAATGTCTGGGTTATaGAATAGCATGCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: VHQTQNKGGWQNWREGATLMSGL*NSMPER
Trigger: TCTTTCTGGCATGCTATTCAATAACCCAGACATTAA...CGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp TCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACTTAATGTCTGGGTTATaGAATAGCATGCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SPDTEQRWVAELAGRSNDLMSGL*NSMPER
Trigger: TCTTTCTGGCATGCTATTCAATAACCCAGACATTAA...GTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp CATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCACAAAGTAGCCTAGTATaGTTTTCCCAAACTTCTTCG +
Preference number: 5 (lower is better)
Translates to: HVHQTQNKGGWQNWREGAQSSLV*FSQTSS
Trigger: CGAAGAAGTTTGGGAAAACAATACTAGGCTACTTTG...TGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS TCA 90 bp AGTCCATCGCGGTGGCCATGGGTTTGCAGGATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGTGCAGATAATGTTCAAAGTAGCCTA +
Preference number: 5 (lower is better)
Translates to: SPSRWPWVCRMSSSL*WHKRPSADNVQSSL
Trigger: TAGGCTACTTTGAACATTATCTGCACTGGGTCTTTTATGCCATCACAGAGAAGATGACATCCTGCAAACCCATGGCCACCGCGATGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 90 bp ACGTATTCAGTGATTGCTGCACAGGAGGGAGGAGATGCTGGTGGATaGCTCTTATATTCTGTACATCCAGTAAGAAGGCCTGTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: TYSVIAAQEGGDAGG*LLYSVHPVRRPVSA
Trigger: AGCTGAAACAGGCCTTCTTACTGGATGTACAGAATATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCACTGAATACGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000177946.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 90 bp ACCCTCACAAATTTCAGTGATTGCTGCACAGGAGGGAGGAGATGCTaGTGGATGGCTCTTATATTCTGTACATCCAGTAAGAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: TLTNFSDCCTGGRRC*WMALIFCTSSKKAC
Trigger: ACAGGCCTTCTTACTGGATGTACAGAATATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCACTGAAATTTGTGAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000171543.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGGAGAATGCCTTGTTCTaGGTGTTGGTGTACTGCTCC +
Preference number: 5 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMENALF*VLVYCS
Trigger: GGAGCAGTACACCAACACCAAGAACAAGGCATTCTC...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp GAGTCATATTCTTCCAGCTTGGGCAGCTCCTGGTTTAAGTATCTGTTGCTGTTATTCTGCAGGGCATCCTaGGTCTGTTTGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: ESYSSSLGSSWFKYLLLLFCRAS*VCLMAV
Trigger: GACAGCCATCAAACAGACCAAGGATGCCCTGCAGAA...TAACAGCAACAGATACTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp AGTGTTTTCACTGCAGTGAGTGCTGACAATTCAAACAGCAGAGATGATGAGAAGGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: SVFTAVSADNSNSRDDEKELRLV*SWVAAS
Trigger: AGATGCAGCCACCCAGCTCAATACCAACCTGAGCTC...CTTCTCATCATCTCTGCTGTTTGAATTGTCAGCACTCACTGCAGTGAAAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp AGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTGATGACATCCACAGTTaGGTTTTGTATTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: RHRTKVGGRTGGKEQRQVDDIHS*VLYCIG
Trigger: CCCAATACAATACAAAACCAAACTGTGGATGTCATC...AACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp AGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGCAACGACAAGTTAAGATAAAATTGCCATaGTTCCTTGAGCAGATAGGG +
Preference number: 5 (lower is better)
Translates to: RHRTKVGGRTGGKEQRQVKIKLP*FLEQIG
Trigger: CCCTATCTGCTCAAGGAACAATGGCAATTTTATCTT...AACTTGTCGTTGCTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACGCCAGAAAGATAAAATaGCCATTGTTCCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHARKIK*PLFLEQ
Trigger: CTGCTCAAGGAACAATGGCAATTTTATCTTTCTGGC...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAGTTAATGTCTGGGTTATaGAATAGCATGCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: CMFTRHRTKVGGRTGGKELMSGL*NSMPER
Trigger: TCTTTCTGGCATGCTATTCAATAACCCAGACATTAA...CTCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ATGCATGTTCACCAGACACAGAACAAAGGTGGGTGGCAGAACTGGCGGGAAGGAACTTCAGTAACAGTGTaGAGTTCTCTATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: MHVHQTQNKGGWQNWREGTSVTV*SSLSTD
Trigger: ATCAGTGGATAGAGAACTCAACACTGTTACTGAAGT...TCCTTCCCGCCAGTTCTGCCACCCACCTTTGTTCTGTGTCTGGTGAACATGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000087442.11
ENSMUST00000197750.5
CDS TCA 90 bp CGGGTTTTTCATGGGCACAGTCTCAACATCGTCGTATACATCCTCTaGATCCATCCTGCGATAGTACTTGGCCAGCTTGATAGCAATGAT +
Preference number: 5 (lower is better)
Translates to: RVFHGHSLNIVVYIL*IHPAIVLGQLDSND
Trigger: ATCATTGCTATCAAGCTGGCCAAGTACTATCGCAGGATGGATTCAGAGGATGTATACGACGATGTTGAGACTGTGCCCATGAAAAACCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196378.5
CDS GCA 90 bp CTTTGTCTTAACGTATTCAGTGATTGCTGCACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATATTCTGTACATCCAGTAAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LCLNVFSDCCTGGRR*WWMALIFCTSSKKA
Trigger: GGCCTTCTTACTGGATGTACAGAATATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTTAAGACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000177946.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 90 bp CTTAACGTATTCAGTGATTGCTGCACAGGAGGGAGGAGATGCTGGTaGATGGCTCTTATATTCTGTACATCCAGTAAGAAGGCCTGTTTC +
Preference number: 5 (lower is better)
Translates to: LNVFSDCCTGGRRCW*MALIFCTSSKKACF
Trigger: GAAACAGGCCTTCTTACTGGATGTACAGAATATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000177946.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACTTCAGTCAGGAGTGTTaGAAAGTCTCTGAAATTGCT +
Preference number: 5 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHFSQEC*KVSEIA
Trigger: AGCAATTTCAGAGACTTTCAAACACTCCTGACTGAA...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACGATGACATCCACAGTTaGGTTTTGTATTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHDDIHS*VLYCIG
Trigger: CCCAATACAATACAAAACCAAACTGTGGATGTCATC...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAGATGACATCCACAGTTaGGTTTTGTATTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSDDIHS*VLYCIG
Trigger: CCCAATACAATACAAAACCAAACTGTGGATGTCATC...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTCATATTCTTCCAGCTaGGGCAGCTCCTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMSYSSS*GSSWFK
Trigger: CTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACGAGCAGACAGAAATCCACAAGGAAGGGCATTGCCTGCTCTAGGTTGACACACAAGATAAAATTGCCATaGTTCCTTGAGCAGATAGGG +
Preference number: 5 (lower is better)
Translates to: TSRQKSTRKGIACSRLTHKIKLP*FLEQIG
Trigger: CCCTATCTGCTCAAGGAACAATGGCAATTTTATCTT...GTGTGTCAACCTAGAGCAGGCAATGCCCTTCCTTGTGGATTTCTGTCTGCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCACAAAGTAGCCTAGTATaGTTTTCCCAAACTTCTTCG +
Preference number: 5 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSQSSLV*FSQTSS
Trigger: CGAAGAAGTTTGGGAAAACAATACTAGGCTACTTTG...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CCGCCTGAGTCTCCACCAGGTTTCTTCTGCACTTGGAACGTTCTAGAAGACTCAACTTCAGTAACAGTGTaGAGTTCTCTATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: PPESPPGFFCTWNVLEDSTSVTV*SSLSTD
Trigger: ATCAGTGGATAGAGAACTCAACACTGTTACTGAAGT...TGAGTCTTCTAGAACGTTCCAAGTGCAGAAGAAACCTGGTGGAGACTCAGGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACCTGGGTGGCTGCATCTaGGAGACTTTTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDLGGCI*ETFQAA
Trigger: AGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAG...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDELRLV*SWVAAS
Trigger: AGATGCAGCCACCCAGCTCAATACCAACCTGAGCTC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CAGCAGAAAGCAGACAATCAAGCCACCCAGCCACCAGTACGAGTCATATTCTTCGATGACATCCACAGTTaGGTTTTGTATTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: QQKADNQATQPPVRVIFFDDIHS*VLYCIG
Trigger: CCCAATACAATACAAAACCAAACTGTGGATGTCATC...GAAGAATATGACTCGTACTGGTGGCTGGGTGGCTTGATTGTCTGCTTTCTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198347.2
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGAAGATAAAATTGCCATaGTTCCTTGAGCAGATAGGG +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEKIKLP*FLEQIG
Trigger: CCCTATCTGCTCAAGGAACAATGGCAATTTTATCTT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGCAAAGTAGCCTAGTATaGTTTTCCCAAACTTCTTCG +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAEQSSLV*FSQTSS
Trigger: CGAAGAAGTTTGGGAAAACAATACTAGGCTACTTTG...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGACTTCAGTAACAGTGTaGAGTTCTCTATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAETSVTV*SSLSTD
Trigger: ATCAGTGGATAGAGAACTCAACACTGTTACTGAAGT...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCCTGGGTGGCTGCATCTaGGAGACTTTTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHILGGCI*ETFQAA
Trigger: AGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAG...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIELRLV*SWVAAS
Trigger: AGATGCAGCCACCCAGCTCAATACCAACCTGAGCTC...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCCTCACAGAGCTCAGGTaGGTATTGAGCTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHILTELR*VLSWVA
Trigger: AGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAG...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATTCCGCTCCCAGCTGAGTTAATGTCTGGGTTATaGAATAGCATGCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: LNCEPGPVIAIMIPLPAELMSGL*NSMPER
Trigger: TCTTTCTGGCATGCTATTCAATAACCCAGACATTAA...CTCAGCTGGGAGCGGAATCATTATCGCAATCACAGGTCCTGGTTCACAGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGATGATTTCTGGCTCCTaGGAATCAACTGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMMISGS*ESTEMS
Trigger: TGACATCTCAGTTGATTCCAAGGAGCCAGAAATCAT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074113.13
ENSMUST00000171543.8
ENSMUST00000179059.8
CDS TCA 90 bp CAAATTTTTCATGGGCACAGTCTCAACATCGTCGTATACATCCTCTaGATCCATCCTGCGATAGTACTTGGCCAGCTTGATAGCAATGAT +
Preference number: 5 (lower is better)
Translates to: QIFHGHSLNIVVYIL*IHPAIVLGQLDSND
Trigger: ATCATTGCTATCAAGCTGGCCAAGTACTATCGCAGGATGGATTCAGAGGATGTATACGACGATGTTGAGACTGTGCCCATGAAAAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
CDS GCA 90 bp CTCCTTCAAGTATGTGGAATAATCGATTGTATCTATCCCAGAATGTaGAAAGTCCTCGAGGCTCTTCCTTCCTGTGTTATCCAACAGTTC +
Preference number: 5 (lower is better)
Translates to: LLQVCGIIDCIYPRM*KVLEALPSCVIQQF
Trigger: GAACTGTTGGATAACACAGGAAGGAAGAGCCTCGAGGACTTTGCACATTCTGGGATAGATACAATCGATTATTCCACATACTTGAAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTTCAGTCAGGAGTGTTaGAAAGTCTCTGAAATTGCT +
Preference number: 5 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMFSQEC*KVSEIA
Trigger: AGCAATTTCAGAGACTTTCAAACACTCCTGACTGAA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGCCTTGTTCTTGGTGTaGGTGTACTGCTCCACTACA +
Preference number: 5 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDALFLV*VYCSTT
Trigger: TGTAGTGGAGCAGTACACCAACACCAAGAACAAGGC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTTCTGCAGGGCATCCTaGGTCTGTTTGATGGCTGTC +
Preference number: 5 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIFCRAS*VCLMAV
Trigger: GACAGCCATCAAACAGACCAAGGATGCCCTGCAGAA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGCTGGGTGGCTGCATCTaGGAGACTTTTCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKLGGCI*ETFQAA
Trigger: AGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAG...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKELRLV*SWVAAS
Trigger: AGATGCAGCCACCCAGCTCAATACCAACCTGAGCTC...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGGATGACATCCACAGTTaGGTTTTGTATTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMDDIHS*VLYCIG
Trigger: CCCAATACAATACAAAACCAAACTGTGGATGTCATC...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACACTTTCTCCGGCAACTaGTTGCTTGTTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDTFSGN*LLVCWR
Trigger: CCTCCAGCAAACAAGCAACAAGTTGCCGGAGAAAGT...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGCAAAGTAGCCTAGTATaGTTTTCCCAAACTTCTTCG +
Preference number: 5 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMQSSLV*FSQTSS
Trigger: CGAAGAAGTTTGGGAAAACAATACTAGGCTACTTTG...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGACTTCAGTAACAGTGTaGAGTTCTCTATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMTSVTV*SSLSTD
Trigger: ATCAGTGGATAGAGAACTCAACACTGTTACTGAAGT...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTCATATTCTTCCAGCTaGGGCAGCTCCTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDSYSSS*GSSWFK
Trigger: CTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp ACAAACCAGAGAGTGCCACTAAACTGTGAACCAGGACCTGTGATTGCGATAATGTTAATGTCTGGGTTATaGAATAGCATGCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: TNQRVPLNCEPGPVIAIMLMSGL*NSMPER
Trigger: TCTTTCTGGCATGCTATTCAATAACCCAGACATTAA...CATTATCGCAATCACAGGTCCTGGTTCACAGTTTAGTGGCACTCTCTGGTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGGCCTTGTTCTTGGTGTaGGTGTACTGCTCCACTACA +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKALFLV*VYCSTT
Trigger: TGTAGTGGAGCAGTACACCAACACCAAGAACAAGGC...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCAGGTCTGAGAATGCCTaGTTCTTGGTGTTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIRSENA*FLVLVY
Trigger: GTACACCAACACCAAGAACAAGGCATTCTCAGACCT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGACTTTCTCCGGCAACTaGTTGCTTGTTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKTFSGN*LLVCWR
Trigger: CCTCCAGCAAACAAGCAACAAGTTGCCGGAGAAAGT...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACCATAGTCAATTTGCTTaGGTGTTTCAGTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDHSQFA*VFQSGV
Trigger: CACTCCTGACTGAAACACCAAAGCAAATTGACTATG...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGAGGTCTGAGAATGCCTaGTTCTTGGTGTTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKRSENA*FLVLVY
Trigger: GTACACCAACACCAAGAACAAGGCATTCTCAGACCT...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGTCATATTCTTCCAGCTaGGGCAGCTCCTGGTTTAAG +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKSYSSS*GSSWFK
Trigger: CTTAAACCAGGAGCTGCCCAAGCTGGAAGAATATGA...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACGCCAGAAAGATAAAATaGCCATTGTTCCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDARKIK*PLFLEQ
Trigger: CTGCTCAAGGAACAATGGCAATTTTATCTTTCTGGC...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACATGATTTCTGGCTCCTaGGAATCAACTGAGATGTCA +
Preference number: 5 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDMISGS*ESTEMS
Trigger: TGACATCTCAGTTGATTCCAAGGAGCCAGAAATCAT...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000074113.13
ENSMUST00000171543.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCCATAGTCAATTTGCTTaGGTGTTTCAGTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIHSQFA*VFQSGV
Trigger: CACTCCTGACTGAAACACCAAAGCAAATTGACTATG...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCGCCAGAAAGATAAAATaGCCATTGTTCCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIARKIK*PLFLEQ
Trigger: CTGCTCAAGGAACAATGGCAATTTTATCTTTCTGGC...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACACTTCAGTAACAGTGTaGAGTTCTCTATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDTSVTV*SSLSTD
Trigger: ATCAGTGGATAGAGAACTCAACACTGTTACTGAAGT...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS CCA 90 bp ATGGAGTCCAAGGTATTTTTGACGTCTTTGATGACATCCACAGTTTaGTTTTGTATTGTATTGGGTATTTCATCAATTGTCGTATACCCC +
Preference number: 5 (lower is better)
Translates to: MESKVFLTSLMTSTV*FCIVLGISSIVVYP
Trigger: GGGGTATACGACAATTGATGAAATACCCAATACAATACAAAACCAAACTGTGGATGTCATCAAAGACGTCAAAAATACCTTGGACTCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CCA 90 bp AATGATCTTTATGATAACCATTACTACCGATTTCCAAATTTTTCATaGGCACAGTCTCAACATCGTCGTATACATCCTCTGAATCCATCC +
Preference number: 5 (lower is better)
Translates to: NDLYDNHYYRFPNFS*AQSQHRRIHPLNPS
Trigger: GGATGGATTCAGAGGATGTATACGACGATGTTGAGACTGTGCCCATGAAAAATTTGGAAATCGGTAGTAATGGTTATCATAAAGATCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
CDS-3UTR CAA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTTCAGTCAGGAGTGTTaGAAAGTCTCTGAAATTGCT +
Preference number: 5 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIFSQEC*KVSEIA
Trigger: AGCAATTTCAGAGACTTTCAAACACTCCTGACTGAA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGCATAGTCAATTTGCTTaGGTGTTTCAGTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKHSQFA*VFQSGV
Trigger: CACTCCTGACTGAAACACCAAAGCAAATTGACTATG...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCAAGATAAAATTGCCATaGTTCCTTGAGCAGATAGGG +
Preference number: 5 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHIKIKLP*FLEQIG
Trigger: CCCTATCTGCTCAAGGAACAATGGCAATTTTATCTT...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp CTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCACAGATGACTTAATGTCTGGGTTATaGAATAGCATGCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: LYFKSQHQDRLMTHITDDLMSGL*NSMPER
Trigger: TCTTTCTGGCATGCTATTCAATAACCCAGACATTAA...GTCATCTGTGATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGGATGACATCCACAGTTaGGTTTTGTATTGTATTGGG +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKDDIHS*VLYCIG
Trigger: CCCAATACAATACAAAACCAAACTGTGGATGTCATC...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGAAGATAAAATTGCCATaGTTCCTTGAGCAGATAGGG +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKKIKLP*FLEQIG
Trigger: CCCTATCTGCTCAAGGAACAATGGCAATTTTATCTT...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp TCATTCATGCTTTATTTTAAATCTCAACATCAGGACAGGCTGATGACACACATCTTAATGTCTGGGTTATaGAATAGCATGCCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SFMLYFKSQHQDRLMTHILMSGL*NSMPER
Trigger: TCTTTCTGGCATGCTATTCAATAACCCAGACATTAA...GATGTGTGTCATCAGCCTGTCCTGATGTTGAGATTTAAAATAAAGCATGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGCAAAGTAGCCTAGTATaGTTTTCCCAAACTTCTTCG +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKQSSLV*FSQTSS
Trigger: CGAAGAAGTTTGGGAAAACAATACTAGGCTACTTTG...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS-3UTR CAA 90 bp AAATACATCTCTTCTGTAAACTGGTTTGTGTTTAGCACACTTCACATATGGAAGACTTCAGTAACAGTGTaGAGTTCTCTATCCACTGAT +
Preference number: 5 (lower is better)
Translates to: KYISSVNWFVFSTLHIWKTSVTV*SSLSTD
Trigger: ATCAGTGGATAGAGAACTCAACACTGTTACTGAAGT...CTTCCATATGTGAAGTGTGCTAAACACAAACCAGTTTACAGAAGAGATGTATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
CDS CCA 72 bp CACCAGGAGGGAGAGGCCCAAGCACTTCCTCCTGCATaGCGCATTCTGCTTCTGCCGCTGGTGCATCTCTCC +
Preference number: 6 (lower is better)
Translates to: HQEGEAQALPPA*RILLLPLVHLS
Trigger: GGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCCATGCAGGAGGAAGTGCTTGGGCCTCTCCCTCCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp GAGAGGCCCAAGCACTTCCTCCTGCATGGCGCATTCTaGTTCTGCCGCTGGTGCATCTCTCCGCCGCATTTG +
Preference number: 6 (lower is better)
Translates to: ERPKHFLLHGAF*FCRWCISPPHL
Trigger: CAAATGCGGCGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCCATGCAGGAGGAAGTGCTTGGGCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp TTCCTCCTGCATGGCGCATTCTGCTTCTGCCGCTGGTaGATCTCTCCGCCGCATTTGTTGCAGCAACGGCAC +
Preference number: 6 (lower is better)
Translates to: FLLHGAFCFCRW*ISPPHLLQQRH
Trigger: GTGCCGTTGCTGCAACAAATGCGGCGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCCATGCAGGAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp CCCAAGCACTTCCTCCTGCATGGCGCATTCTGCTTCTaGCGCTGGTGCATCTCTCCGCCGCATTTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: PKHFLLHGAFCF*RWCISPPHLLQ
Trigger: CTGCAACAAATGCGGCGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCCATGCAGGAGGAAGTGCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 90 bp GGCGCATTCTGCTTCTGCCGCTGGTGCATCTCTCCGCCGCATTTGTaGCAGCAACGGCACATACAAAAGAAGCAGCCCACCAGAGGCATG +
Preference number: 6 (lower is better)
Translates to: GAFCFCRWCISPPHL*QQRHIQKKQPTRGM
Trigger: CATGCCTCTGGTGGGCTGCTTCTTTTGTATGTGCCGTTGCTGCAACAAATGCGGCGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 90 bp CATGGCGCATTCTGCTTCTGCCGCTGGTGCATCTCTCCGCCGCATTaGTTGCAGCAACGGCACATACAAAAGAAGCAGCCCACCAGAGGC +
Preference number: 6 (lower is better)
Translates to: HGAFCFCRWCISPPH*LQQRHIQKKQPTRG
Trigger: GCCTCTGGTGGGCTGCTTCTTTTGTATGTGCCGTTGCTGCAACAAATGCGGCGGAGAGATGCACCAGCGGCAGAAGCAGAATGCGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS TCA 72 bp TCTGCCTCCCAGCACGGAGCCGATGCCATCCAGGTCTaGGAATGCCTTGTTCTTGGTGTTGGTGTACTGCTC +
Preference number: 6 (lower is better)
Translates to: SASQHGADAIQV*ECLVLGVGVLL
Trigger: GAGCAGTACACCAACACCAAGAACAAGGCATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGGGAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS GCA 72 bp GCTTCTGCCGCTGGTGCATCTCTCCGCCGCATTTGTTaGAGCAACGGCACATACAAAAGAAGCAGCCCACCA +
Preference number: 6 (lower is better)
Translates to: ASAAGASLRRIC*SNGTYKRSSPP
Trigger: TGGTGGGCTGCTTCTTTTGTATGTGCCGTTGCTGCAACAAATGCGGCGGAGAGATGCACCAGCGGCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp TGCTTCTGCCGCTGGTGCATCTCTCCGCCGCATTTGTaGCAGCAACGGCACATACAAAAGAAGCAGCCCACC +
Preference number: 6 (lower is better)
Translates to: CFCRWCISPPHL*QQRHIQKKQPT
Trigger: GGTGGGCTGCTTCTTTTGTATGTGCCGTTGCTGCAACAAATGCGGCGGAGAGATGCACCAGCGGCAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp TTCTGCTTCTGCCGCTGGTGCATCTCTCCGCCGCATTaGTTGCAGCAACGGCACATACAAAAGAAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: FCFCRWCISPPH*LQQRHIQKKQP
Trigger: GGGCTGCTTCTTTTGTATGTGCCGTTGCTGCAACAAATGCGGCGGAGAGATGCACCAGCGGCAGAAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp GTTGGTCCTTTATTCTGCCTCCCAGCACGGAGCCGATaGCATCCAGGTCTGAGAATGCCTTGTTCTTGGTGT +
Preference number: 6 (lower is better)
Translates to: VGPLFCLPARSR*HPGLRMPCSWC
Trigger: ACACCAAGAACAAGGCATTCTCAGACCTGGATGGCATCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS GCA 72 bp GCATCTTGGAGACTTTTCAGGCTGCTGCTCATGTTCTaGAGGGCATCCTTGGTCTGTTTGATGGCTGTCGCC +
Preference number: 6 (lower is better)
Translates to: ASWRLFRLLLMF*RASLVCLMAVA
Trigger: GGCGACAGCCATCAAACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCCAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CAA 72 bp CTGCTGCTCATGTTCTGCAGGGCATCCTTGGTCTGTTaGATGGCTGTCGCCATGGCCTTAATCTCTTCGAGG +
Preference number: 6 (lower is better)
Translates to: LLLMFCRASLVC*MAVAMALISSR
Trigger: CCTCGAAGAGATTAAGGCCATGGCGACAGCCATCAAACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS TCA 72 bp CATCCCCGAGACGGACGAGTCGTCGTATACATCCTCTaGATCCATCCTGCGATAGTACTTGGCCAGCTTGAT +
Preference number: 6 (lower is better)
Translates to: HPRDGRVVVYIL*IHPAIVLGQLD
Trigger: ATCAAGCTGGCCAAGTACTATCGCAGGATGGATTCAGAGGATGTATACGACGACTCGTCCGTCTCGGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000030973.12
ENSMUST00000087442.11
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp CAGGAGTTACTTTGGGTTTTAGTTGGTCCTTTATTCTaGCTCCCAGCACGGAGCCGATGCCATCCAGGTCTG +
Preference number: 6 (lower is better)
Translates to: QELLWVLVGPLF*LPARSRCHPGL
Trigger: CAGACCTGGATGGCATCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGTAACTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CAA 90 bp ATGGCTGTCGCCATGGCCTTAATCTCTTCGAGGACAGGAGTTACTTaGGGTTTTAGTTGGTCCTTTATTCTGCCTCCCAGCACGGAGCCG +
Preference number: 6 (lower is better)
Translates to: MAVAMALISSRTGVT*GFSWSFILPPSTEP
Trigger: CGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCCTCGAAGAGATTAAGGCCATGGCGACAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CAA 90 bp CTTTTCAGGCTGCTGCTCATGTTCTGCAGGGCATCCTTGGTCTGTTaGATGGCTGTCGCCATGGCCTTAATCTCTTCGAGGACAGGAGTT +
Preference number: 6 (lower is better)
Translates to: LFRLLLMFCRASLVC*MAVAMALISSRTGV
Trigger: AACTCCTGTCCTCGAAGAGATTAAGGCCATGGCGACAGCCATCAAACAGACCAAGGATGCCCTGCAGAACATGAGCAGCAGCCTGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CAA 90 bp GTTTCTCACAGAGCTCAGGTTGGTATTGAGCTGGGTGGCTGCATCTaGGAGACTTTTCAGGCTGCTGCTCATGTTCTGCAGGGCATCCTT +
Preference number: 6 (lower is better)
Translates to: VSHRAQVGIELGGCI*ETFQAAAHVLQGIL
Trigger: AAGGATGCCCTGCAGAACATGAGCAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CAA 90 bp CTGAGCGAATTCTCGATGCTGTTTCTCACAGAGCTCAGGTTGGTATaGAGCTGGGTGGCTGCATCTTGGAGACTTTTCAGGCTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LSEFSMLFLTELRLV*SWVAASWRLFRLLL
Trigger: GAGCAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAGAAACAGCATCGAGAATTCGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CAA 90 bp CTGCTGCTGAGCGAATTCTCGATGCTGTTTCTCACAGAGCTCAGGTaGGTATTGAGCTGGGTGGCTGCATCTTGGAGACTTTTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LLLSEFSMLFLTELR*VLSWVAASWRLFRL
Trigger: CAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAGAAACAGCATCGAGAATTCGCTCAGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS TCA 72 bp TCTTGCTGGCTGGATCTGAGGTACAGTCACTGCTGCTaGGCGAATTCTCGATGCTGTTTCTCACAGAGCTCA +
Preference number: 6 (lower is better)
Translates to: SCWLDLRYSHCC*ANSRCCFSQSS
Trigger: TGAGCTCTGTGAGAAACAGCATCGAGAATTCGCTCAGCAGCAGTGACTGTACCTCAGATCCAGCCAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS GCA 72 bp AGGGTCCAGACACTTTGTCTTAACGTATTCAGTGATTaGTGCACAGGAGGGAGGAGATGCTGGTGGATGGCT +
Preference number: 6 (lower is better)
Translates to: RVQTLCLNVFSD*CTGGRRCWWMA
Trigger: AGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTTAAGACAAAGTGTCTGGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000177946.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp TTACAGCCGGAAGTAAGAGCACCGTGGCTTTCCCTATaGCGAACCAGAACAAATTCAGAGGGTCCGCAACAT +
Preference number: 6 (lower is better)
Translates to: LQPEVRAPWLSL*RTRTNSEGPQH
Trigger: ATGTTGCGGACCCTCTGAATTTGTTCTGGTTCGGCATAGGGAAAGCCACGGTGCTCTTACTTCCGGCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196378.5
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 72 bp ATGCTGTTTCTCACAGAGCTCAGGTTGGTATTGAGCTaGGTGGCTGCATCTTGGAGACTTTTCAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: MLFLTELRLVLS*VAASWRLFRLL
Trigger: CAGCAGCCTGAAAAGTCTCCAAGATGCAGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAGAAACAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS TCA 72 bp CACCACACAGCAAGCCCAGGAAAAAGAAGGTCACAATaGGAGTCAGCAGAAAGCAGACAATCAAGCCACCCA +
Preference number: 6 (lower is better)
Translates to: HHTASPGKRRSQ*ESAESRQSSHP
Trigger: TGGGTGGCTTGATTGTCTGCTTTCTGCTGACTCTCATTGTGACCTTCTTTTTCCTGGGCTTGCTGTGTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp GAAGGCCTGTTTCAGCTTTCCTTCAGGCAACTGGTTTaGTTTTGCTTCCAGGGTAGAGGCAAATGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: EGLFQLSFRQLV*FCFQGRGKCQQ
Trigger: CTGCTGACATTTGCCTCTACCCTGGAAGCAAAAGCAAACCAGTTGCCTGAAGGAAAGCTGAAACAGGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 72 bp ATCTCTTCGAGGACAGGAGTTACTTTGGGTTTTAGTTaGTCCTTTATTCTGCCTCCCAGCACGGAGCCGATG +
Preference number: 6 (lower is better)
Translates to: ISSRTGVTLGFS*SFILPPSTEPM
Trigger: CATCGGCTCCGTGCTGGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCCTCGAAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CCA 72 bp GTGATTGCTGCACAGGAGGGAGGAGATGCTGGTGGATaGCTCTTATATTCTGTACATCCAGTAAGAAGGCCT +
Preference number: 6 (lower is better)
Translates to: VIAAQEGGDAGG*LLYSVHPVRRP
Trigger: AGGCCTTCTTACTGGATGTACAGAATATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp TCTCTGAAATTGCTCTTTGCCAGTTTCTGGGTCCCTTaGATCCGAGTCCTGGTCTGCTGGTTAGCCACAAAG +
Preference number: 6 (lower is better)
Translates to: SLKLLFASFWVP*IRVLVCWLATK
Trigger: CTTTGTGGCTAACCAGCAGACCAGGACTCGGATCAAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp AGCGAATTCTCGATGCTGTTTCTCACAGAGCTCAGGTaGGTATTGAGCTGGGTGGCTGCATCTTGGAGACTT +
Preference number: 6 (lower is better)
Translates to: SEFSMLFLTELR*VLSWVAASWRL
Trigger: AAGTCTCCAAGATGCAGCCACCCAGCTCAATACCAACCTGAGCTCTGTGAGAAACAGCATCGAGAATTCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS TCA 72 bp CATGGGCACAGTCTCAACATCGTCGTATACATCCTCTaGATCCATCCTGCGATAGTACTTGGCCAGCTTGAT +
Preference number: 6 (lower is better)
Translates to: HGHSLNIVVYIL*IHPAIVLGQLD
Trigger: ATCAAGCTGGCCAAGTACTATCGCAGGATGGATTCAGAGGATGTATACGACGATGTTGAGACTGTGCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000196378.5
CDS CAA 72 bp GCCATGGCCTTAATCTCTTCGAGGACAGGAGTTACTTaGGGTTTTAGTTGGTCCTTTATTCTGCCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: AMALISSRTGVT*GFSWSFILPPS
Trigger: GCTGGGAGGCAGAATAAAGGACCAACTAAAACCCAAAGTAACTCCTGTCCTCGAAGAGATTAAGGCCATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS TCA 72 bp CGGTGGCCATGGGTTTGCAGGATGTCATCTTCTCTGTaGTGGCATAAAAGACCCAGTGCAGATAATGTTCAA +
Preference number: 6 (lower is better)
Translates to: RWPWVCRMSSSL*WHKRPSADNVQ
Trigger: TTGAACATTATCTGCACTGGGTCTTTTATGCCATCACAGAGAAGATGACATCCTGCAAACCCATGGCCACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp AGTCAGGAGTGTTTGAAAGTCTCTGAAATTGCTCTTTaGCAGTTTCTGGGTCCCTTTGATCCGAGTCCTGGT +
Preference number: 6 (lower is better)
Translates to: SQECLKVSEIAL*QFLGPFDPSPG
Trigger: ACCAGGACTCGGATCAAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGAGACTTTCAAACACTCCTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp CTGTTTCAGCTTTCCTTCAGGCAACTGGTTTGCTTTTaGTTCCAGGGTAGAGGCAAATGTCAGCAGATTCAC +
Preference number: 6 (lower is better)
Translates to: LFQLSFRQLVCF*FQGRGKCQQIH
Trigger: GTGAATCTGCTGACATTTGCCTCTACCCTGGAAGCAAAAGCAAACCAGTTGCCTGAAGGAAAGCTGAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp AACGTATTCAGTGATTGCTGCACAGGAGGGAGGAGATaGTGGTGGATGGCTCTTATATTCTGTACATCCAGT +
Preference number: 6 (lower is better)
Translates to: NVFSDCCTGGRR*WWMALIFCTSS
Trigger: ACTGGATGTACAGAATATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCACTGAATACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000177946.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 72 bp TTCAGTGATTGCTGCACAGGAGGGAGGAGATGCTGGTaGATGGCTCTTATATTCTGTACATCCAGTAAGAAG +
Preference number: 6 (lower is better)
Translates to: FSDCCTGGRRCW*MALIFCTSSKK
Trigger: CTTCTTACTGGATGTACAGAATATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 72 bp GTATTCAGTGATTGCTGCACAGGAGGGAGGAGATGCTaGTGGATGGCTCTTATATTCTGTACATCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: VFSDCCTGGRRC*WMALIFCTSSK
Trigger: CTTACTGGATGTACAGAATATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCACTGAATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000177946.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp CAAGGATCTTCTTCACTTTCTCCGGCAACTTGTTGCTaGTTTGCTGGAGGGTCCAGACACTTTGTCTTAACG +
Preference number: 6 (lower is better)
Translates to: QGSSSLSPATCC*FAGGSRHFVLT
Trigger: CGTTAAGACAAAGTGTCTGGACCCTCCAGCAAACAAGCAACAAGTTGCCGGAGAAAGTGAAGAAGATCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp AGTCCCAGGATGGCGCAGATAAGGACTCCGATCTCCTaGGAATCAACTGAGATGTCAAAGTTCTTGTTCTGT +
Preference number: 6 (lower is better)
Translates to: SPRMAQIRTPIS*ESTEMSKFLFC
Trigger: ACAGAACAAGAACTTTGACATCTCAGTTGATTCCAAGGAGATCGGAGTCCTTATCTGCGCCATCCTGGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197706.5
CDS CCA 72 bp AATTTCAGTGATTGCTGCACAGGAGGGAGGAGATGCTaGTGGATGGCTCTTATATTCTGTACATCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: NFSDCCTGGRRC*WMALIFCTSSK
Trigger: CTTACTGGATGTACAGAATATAAGAGCCATCCACCAGCATCTCCTCCCTCCTGTGCAGCAATCACTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000171543.8
ENSMUST00000179059.8
CDS CAA 90 bp CACCATTTTGTAGAGAGGGCCAACAATCCCAGCATTGAAGGTATCTaGGGTCTCATATTTGGTGGTAGGCAATTCATAATTCATAGCCCC +
Preference number: 6 (lower is better)
Translates to: HHFVERANNPSIEGI*GLIFGGRQFIIHSP
Trigger: GGGGCTATGAATTATGAATTGCCTACCACCAAATATGAGACCCAAGATACCTTCAATGCTGGGATTGTTGGCCCTCTCTACAAAATGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196178.2
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS TCA 72 bp CGATCTCATAGAGGGCAATCTTCAGAGCCAAGACTATaGTTTCTGGCTCCTTGGAATCAACTGAGATGTCAA +
Preference number: 6 (lower is better)
Translates to: RSHRGQSSEPRL*FLAPWNQLRCQ
Trigger: TTGACATCTCAGTTGATTCCAAGGAGCCAGAAATCATAGTCTTGGCTCTGAAGATTGCCCTCTATGAGATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074113.13
ENSMUST00000171543.8
ENSMUST00000179059.8
CDS TCA 72 bp ATAACGATGAGGGAAACGTTATTGGTGAGGAAATGCTaGACAGAGTCCAAAGAGGCAAGGATCTTCTTCACT +
Preference number: 6 (lower is better)
Translates to: ITMRETLLVRKC*TESKEARIFFT
Trigger: AGTGAAGAAGATCCTTGCCTCTTTGGACTCTGTTCAGCATTTCCTCACCAATAACGTTTCCCTCATCGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS GCA 72 bp GTATGTGGAATAATCGATTGTATCTATCCCAGAATGTaGAAAGTCCTCGAGGCTCTTCCTTCCTGTGTTATC +
Preference number: 6 (lower is better)
Translates to: VCGIIDCIYPRM*KVLEALPSCVI
Trigger: GATAACACAGGAAGGAAGAGCCTCGAGGACTTTGCACATTCTGGGATAGATACAATCGATTATTCCACATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 72 bp GAGACCTGTAACAGCATATCCTCAATAGGAATACTTTaGCTCATGTCCTTAATGTTGGAGCTAATGGAGTCC +
Preference number: 6 (lower is better)
Translates to: ETCNSISSIGIL*LMSLMLELMES
Trigger: GGACTCCATTAGCTCCAACATTAAGGACATGAGCCAAAGTATTCCTATTGAGGATATGCTGTTACAGGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp GTAGAGAGGGCCAACAATCCCAGCATTGAAGGTATCTaGGGTCTCATATTTGGTGGTAGGCAATTCATAATT +
Preference number: 6 (lower is better)
Translates to: VERANNPSIEGI*GLIFGGRQFII
Trigger: AATTATGAATTGCCTACCACCAAATATGAGACCCAAGATACCTTCAATGCTGGGATTGTTGGCCCTCTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196178.2
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 90 bp CTCCACTACATAGTCAATTTGCTTTGGTGTTTCAGTCAGGAGTGTTaGAAAGTCTCTGAAATTGCTCTTTGCCAGTTTCTGGGTCCCTTT +
Preference number: 6 (lower is better)
Translates to: LHYIVNLLWCFSQEC*KVSEIALCQFLGPF
Trigger: AAAGGGACCCAGAAACTGGCAAAGAGCAATTTCAGAGACTTTCAAACACTCCTGACTGAAACACCAAAGCAAATTGACTATGTAGTGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp ATTTCTCAGTCTCCTTCAAGTATGTGGAATAATCGATaGTATCTATCCCAGAATGTGCAAAGTCCTCGAGGC +
Preference number: 6 (lower is better)
Translates to: ISQSPSSMWNNR*YLSQNVQSPRG
Trigger: GCCTCGAGGACTTTGCACATTCTGGGATAGATACAATCGATTATTCCACATACTTGAAGGAGACTGAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp GCAATCTTCAGAGCCAAGACTATGATTTCTGGCTCCTaGGAATCAACTGAGATGTCAAAGTTCTTGTTCTGT +
Preference number: 6 (lower is better)
Translates to: AIFRAKTMISGS*ESTEMSKFLFC
Trigger: ACAGAACAAGAACTTTGACATCTCAGTTGATTCCAAGGAGCCAGAAATCATAGTCTTGGCTCTGAAGATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000074113.13
ENSMUST00000171543.8
ENSMUST00000179059.8
CDS CAA 90 bp TTGGAATCAACTGAGATGTCAAAGTTCTTGTTCTGTATGAGTTTTTaGATCAAATCTAGAGGGAAGTCATTCGGCTGGACCACGTTGAGG +
Preference number: 6 (lower is better)
Translates to: LESTEMSKFLFCMSF*IKSRGKSFGWTTLR
Trigger: CCTCAACGTGGTCCAGCCGAATGACTTCCCTCTAGATTTGATCAAAAAACTCATACAGAACAAGAACTTTGACATCTCAGTTGATTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000196178.2
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp TCCTCAATAGGAATACTTTGGCTCATGTCCTTAATGTaGGAGCTAATGGAGTCCAAGGTATTTTTGACGTCT +
Preference number: 6 (lower is better)
Translates to: SSIGILWLMSLM*ELMESKVFLTS
Trigger: AGACGTCAAAAATACCTTGGACTCCATTAGCTCCAACATTAAGGACATGAGCCAAAGTATTCCTATTGAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 90 bp AACAGCATATCCTCAATAGGAATACTTTGGCTCATGTCCTTAATGTaGGAGCTAATGGAGTCCAAGGTATTTTTGACGTCTTTGATGACA +
Preference number: 6 (lower is better)
Translates to: NSISSIGILWLMSLM*ELMESKVFLTSLMT
Trigger: TGTCATCAAAGACGTCAAAAATACCTTGGACTCCATTAGCTCCAACATTAAGGACATGAGCCAAAGTATTCCTATTGAGGATATGCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CCA 72 bp TATGATAACCATTACTACCGATTTCCAAATTTTTCATaGGCACAGTCTCAACATCGTCGTATACATCCTCTG +
Preference number: 6 (lower is better)
Translates to: YDNHYYRFPNFS*AQSQHRRIHPL
Trigger: CAGAGGATGTATACGACGATGTTGAGACTGTGCCCATGAAAAATTTGGAAATCGGTAGTAATGGTTATCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000074113.13
ENSMUST00000087441.11
CDS TCA 72 bp ATAGCATGCCAGAAAGATAAAATTGCCATTGTTCCTTaGGCAGATAGGGAGTGTCCAAAACCTGTAATAATT +
Preference number: 6 (lower is better)
Translates to: IACQKDKIAIVP*ADRECPKPVII
Trigger: AATTATTACAGGTTTTGGACACTCCCTATCTGCTCAAGGAACAATGGCAATTTTATCTTTCTGGCATGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
CDS CAA 72 bp TTGGAGCTAATGGAGTCCAAGGTATTTTTGACGTCTTaGATGACATCCACAGTTTGGTTTTGTATTGTATTG +
Preference number: 6 (lower is better)
Translates to: LELMESKVFLTS*MTSTVWFCIVL
Trigger: CAATACAATACAAAACCAAACTGTGGATGTCATCAAAGACGTCAAAAATACCTTGGACTCCATTAGCTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2
CDS CAA 90 bp AATGGAGTCCAAGGTATTTTTGACGTCTTTGATGACATCCACAGTTaGGTTTTGTATTGTATTGGGTATTTCATCAATTGTCGTATACCC +
Preference number: 6 (lower is better)
Translates to: NGVQGIFDVFDDIHS*VLYCIGYFINCRIP
Trigger: GGGTATACGACAATTGATGAAATACCCAATACAATACAAAACCAAACTGTGGATGTCATCAAAGACGTCAAAAATACCTTGGACTCCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000030973.12
ENSMUST00000074113.13
ENSMUST00000087441.11
ENSMUST00000087442.11
ENSMUST00000165909.8
ENSMUST00000171543.8
ENSMUST00000177946.8
ENSMUST00000179059.8
ENSMUST00000197706.5
ENSMUST00000197750.5
ENSMUST00000198347.2